Citrus Sinensis ID: 040531

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
Protein Sequence
MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHccccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccccEcHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccccccccc
Coil and Loop (DISEMBL)
MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSllsssplvtylhcDVSLEQDIQNLINVTiskhgrldilfnnagvlgnqskhksitdfdanefdniIRINVRGAALGMKYAAKVMvprrsgciiSTASVASLmgglgphaytVSKHAIVGLTkntacelgkygirvncispFGVATSMLVNAWKSCedcmdsgkpceeEEEKMEELVRGLANLKGVTLKARDIAEAALYLAsdeskyisghnlvvdggfttskncvgl
Flexible Loop (DISEMBL)
MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLasdeskyiSGHNlvvdggfttskncvgl
Low Complexity Region (SEG)
MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVViadiddaagialadsllsssPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCeeeeekmeeLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL
Disordered region (IsUnstruct)
*********YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCM***************LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT*******
Disordered Region (DISOPRED)
****************IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCM************MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL
Disordered Region (DISEMBL)
MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCE******************LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL
Disordered Region (DISPRO)
********A*KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPxxxxxxxxxxxxxxxxxxxxxTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	285	2.2.26 [Sep-21-2011]
Q9SCU0	303	Short-chain dehydrogenase	yes	no	0.950	0.894	0.697	1e-107
P50160	336	Sex determination protein	N/A	no	0.954	0.809	0.626	1e-94
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.891	0.951	0.474	1e-68
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.884	0.845	0.494	9e-64
Q94K41	257	Short-chain dehydrogenase	no	no	0.884	0.980	0.476	5e-63
O80713	257	Short-chain dehydrogenase	no	no	0.873	0.968	0.472	1e-59
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.929	0.929	0.447	2e-58
F4J300	259	Short-chain dehydrogenase	no	no	0.877	0.965	0.463	3e-58
O80714	258	Short-chain dehydrogenase	no	no	0.859	0.949	0.455	8e-56
Q7FAE1	274	Momilactone A synthase OS	no	no	0.905	0.941	0.463	2e-55

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/278 (69%), Positives = 234/278 (84%), Gaps = 7/278 (2%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTY 68
           K LEGK+AI+TGGA GIG+ATV LF +HGA VVIAD+D+ AG +LA SL S  +SP+V +
Sbjct: 30  KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           + CDVS+E D++NL+NVT++++GRLDILFNNAGVLG+Q KHKSI DFDA+EFD+++R+NV
Sbjct: 90  ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query: 129 RGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           RG  LGMK+ A+ M+ R   GCIISTASVA +MGG+GPHAYT SKHAIVGLTKN ACELG
Sbjct: 150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
           KYGIRVNCISPFGVATSMLVNAW+        G   +++ E+MEE VR LANLKG TL+A
Sbjct: 210 KYGIRVNCISPFGVATSMLVNAWRKTS----GGDVEDDDVEEMEEFVRSLANLKGETLRA 265

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
            DIAEAALYLASDESKY++GHNLVVDGG TT++NCVGL
Sbjct: 266 NDIAEAALYLASDESKYVNGHNLVVDGGVTTARNCVGL 303

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  346 bits (887), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 181/289 (62%), Positives = 224/289 (77%), Gaps = 17/289 (5%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K L+GK+AIVTGGARGIGEA VRLF KHGA+VVIADIDDAAG ALA +L    P V+++ 
Sbjct: 51  KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASAL---GPQVSFVR 107

Query: 71  CDVSLEQDIQNLINVTISKHG-RLDILFNNAGVLGNQSKH-KSITDFDANEFDNIIRINV 128
           CDVS+E D++  ++  +S+HG RLD+  NNAGVLG Q++  +SI  FDA EFD ++R+N 
Sbjct: 108 CDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNA 167

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            GAALGMK+AA+ M PRR+G I+S ASVA+++GGLGPHAYT SKHAIVGLTKN ACEL  
Sbjct: 168 LGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRA 227

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGK------------PCEEEEEKMEELVRG 236
           +G+RVNC+SPFGVAT ML+NAW+   D   +              P ++E EKMEE+VRG
Sbjct: 228 HGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRG 287

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           LA LKG TL+ RDIAEA L+LASDE++YISGHNLVVDGG TTS+N +GL
Sbjct: 288 LATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNLIGL 336

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  260 bits (664), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 132/278 (47%), Positives = 181/278 (65%), Gaps = 24/278 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+A+VTGGA GIGE+  RLF++HGAK+ I D+ D  G  ++  L    P   Y HCD
Sbjct: 3   LEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRL-GGDPHACYFHCD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V++E D++  ++ T  K+G +DI+ NNAG+ G+  K   I D D NEF  +  INV G  
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGD--KVIDIRDADFNEFKKVFDINVNGVF 119

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LGMK+AA++M+P+  G I+S ASV+S++ G GPH YT +KHA+VGLTK+ A ELG++GIR
Sbjct: 120 LGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIR 179

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL-------ANLKGVTL 245
           VNC+SP+ V T +                P   E E  E+ +RG        ANLKGV L
Sbjct: 180 VNCVSPYAVPTRL--------------SMPYLPESEMQEDALRGFLTFVRSNANLKGVDL 225

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCV 283
              D+AEA LYLA++ESKY+SG NLV+DGGF+ + + +
Sbjct: 226 MPNDVAEAVLYLATEESKYVSGLNLVIDGGFSIANHTL 263

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  243 bits (621), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/271 (49%), Positives = 176/271 (64%), Gaps = 19/271 (7%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L+GKIAI+TGGA GIG   VRLF  HGAKVVI DI +  G  LA S+       ++  
Sbjct: 42  QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSI--GLDKASFYR 99

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           C+V+ E D++N +  T+ KHG+LD+LF+NAGVL       S+ D D   FD  + +NVRG
Sbjct: 100 CNVTDETDVENAVKFTVEKHGKLDVLFSNAGVL---EAFGSVLDLDLEAFDRTMAVNVRG 156

Query: 131 AALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           AA  +K+AA+ MV   + G I+ T S+A+ +GG GPH+YT SKHA++GL ++    LG+Y
Sbjct: 157 AAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQY 216

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           GIRVN ++P+GVAT M             +    EE  + +EE    L NLKGV LKAR 
Sbjct: 217 GIRVNGVAPYGVATGM-------------TSAYNEEAVKMLEEYGEALGNLKGVVLKARH 263

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSK 280
           IAEAAL+LASD+S YISG NLVVDGGF+  K
Sbjct: 264 IAEAALFLASDDSVYISGQNLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  241 bits (614), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 129/271 (47%), Positives = 175/271 (64%), Gaps = 19/271 (7%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K L+GKI I+TGGA GIG  +VRLF +HGA+VVI D+ D  G  +A S+       +Y H
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSI--GEDKASYYH 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ E +++N +  T+ K+G+LD+LF+NAGV+       SI D + NE D  I IN+RG
Sbjct: 62  CDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI---EPFVSILDLNLNELDRTIAINLRG 118

Query: 131 AALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
            A  +K+AA+ MV +   G I+ T SVA+ + G  PH YT SKH ++GL K+ +  LGKY
Sbjct: 119 TAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKY 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           GIRVN ++PFGVAT ++ N +K              E   +E+     ANLKG+ LKAR 
Sbjct: 179 GIRVNGVAPFGVATPLVCNGFKM-------------EPNVVEQNTSASANLKGIVLKARH 225

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSK 280
           +AEAAL+LASDES Y+SG NL VDGG++  K
Sbjct: 226 VAEAALFLASDESAYVSGQNLAVDGGYSVVK 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/269 (47%), Positives = 174/269 (64%), Gaps = 20/269 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GKIAI+TGGA GIG   VRLF  HGAKVVI D  +  G  +A S+       ++  CD
Sbjct: 6   LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSV--GKDKASFYRCD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E++++N +  T+ K+G+LD+LF+NAGV+    +  S  D +  +FD  + +NVRGAA
Sbjct: 64  VTNEKEVENAVKFTVEKYGKLDVLFSNAGVM---EQPGSFLDLNLEQFDRTMAVNVRGAA 120

Query: 133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             +K+AA+ MV + + G I+ T SVAS +GG GPHAYT SKHA++GL K+    LGKYGI
Sbjct: 121 AFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGI 180

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P+ VAT++      +  D        EE    +EE       LKGV LKAR +A
Sbjct: 181 RVNGVAPYAVATAI------NSRD--------EETVRMVEEYSAATGILKGVVLKARHVA 226

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTSK 280
           EAAL+LASD+S Y+SG NL VDGG++  K
Sbjct: 227 EAALFLASDDSAYVSGQNLAVDGGYSVVK 255

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/295 (44%), Positives = 184/295 (62%), Gaps = 30/295 (10%)

Query: 1   MNLNTEKKAY-----KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL 55
           M+ NTE  +Y     + L GK+A++TGGA GIGE+ VRLF KHGAKV I D+ D  G  +
Sbjct: 1   MSTNTESSSYSSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEV 60

Query: 56  ADSLL--SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT 113
             SLL   S     ++H DV +E DI N ++  +   G LDIL NNAG+ G  +    I 
Sbjct: 61  CKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCG--APCPDIR 118

Query: 114 DFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH 173
           ++  +EF+    +NV+GA L MK+AA+VM+P + G I+S  SV  ++GG+GPH+Y  SKH
Sbjct: 119 NYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKH 178

Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL 233
           A++GLT++ A ELG++GIRVNC+SP+ VAT + +                  EEE+ E+ 
Sbjct: 179 AVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLP--------------EEERTEDA 224

Query: 234 VRGL-------ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
             G        ANLKGV L   D+A A L+LASD+S+YISG NL++DGGFT + +
Sbjct: 225 FVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNH 279

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/272 (46%), Positives = 171/272 (62%), Gaps = 22/272 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L+GKI I+TGGA GIG    RLF  HGAKVVI D+ +  G  +A S+       ++  
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSI--GLDKASFYR 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CD++ E +++N +  T+ KHG+LD+LF+NAGV+     H SI D D   FD  + +NVRG
Sbjct: 62  CDITDETEVENAVKFTVEKHGKLDVLFSNAGVM---EPHGSILDLDLEAFDRTMAVNVRG 118

Query: 131 AALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           AA  +K+AA+ MV   + G I+ T SV + +GG GPH+YT SKHA++GL ++    LGKY
Sbjct: 119 AAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKY 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM-EELVRGLANLKGVTLKAR 248
           GIRVN ++P+GVAT +                   EE  KM E+     A LKGV LKAR
Sbjct: 179 GIRVNGVAPYGVATGL---------------TSYNEETVKMVEDYCSATAILKGVVLKAR 223

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
            +A+AAL+LASD+S YISG NL VDGG++  K
Sbjct: 224 HVADAALFLASDDSVYISGQNLGVDGGYSVVK 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  217 bits (553), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/272 (45%), Positives = 170/272 (62%), Gaps = 27/272 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGKI I+TGGA GIG    RLF  HGAKVVI D+ +  G  +A  +L      ++  CD
Sbjct: 6   LEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVA--VLIGKDKASFYRCD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E ++++ +  T+ KHG+LD+LF+NAGVL      +S  DFD   FD I+ +NVRGAA
Sbjct: 64  VTNETEVEDAVKFTVEKHGKLDVLFSNAGVL---EPLESFLDFDLERFDRIMAVNVRGAA 120

Query: 133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             +K+AA+ MV + + G I+ T SV++ +GG G H YT SKH +VGL ++   +LGKYGI
Sbjct: 121 AFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGI 179

Query: 192 RVNCISPFGVATSMLVN---AWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
           RVN ++P+ VAT M  +     K  ED  D+               +G+  LKG+ LKA 
Sbjct: 180 RVNGVAPYAVATPMTSHDEVTGKQLEDYFDA---------------KGI--LKGMVLKAS 222

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
            +A+ AL+LASD+S YISG NL VDGG+T  K
Sbjct: 223 HVAQVALFLASDDSAYISGQNLAVDGGYTVVK 254

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/276 (46%), Positives = 178/276 (64%), Gaps = 18/276 (6%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L GK+A++TGGA GIG  T RLFVKHGA+VV+ADI D  G +L   L   +   +Y+H
Sbjct: 13  RKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDAS--SYVH 70

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ E D+   ++  +++ G+LD++FNNAGV G       +++    +F+ ++ +N+ G
Sbjct: 71  CDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFR--MSECTKEDFERVLAVNLVG 128

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             LG K+AA+VM P R G IISTAS++S + G   HAYT SKHA+VG T+N A ELG++G
Sbjct: 129 PFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHG 188

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV-TLKARD 249
           IRVNC+SP GVAT +   A       MD        +E +E ++   ANLKG   LKA D
Sbjct: 189 IRVNCVSPAGVATPLARAAMG-----MD--------DEAIEAIMANSANLKGAGALKADD 235

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           IA AAL+LASD+ +Y+SG NL VDGG +   +  G 
Sbjct: 236 IAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGF 271

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
225439592	303	PREDICTED: sex determination protein tas	0.978	0.920	0.765	1e-124
255586274	303	short chain alcohol dehydrogenase, putat	0.954	0.897	0.753	1e-122
224145500	278	predicted protein [Populus trichocarpa]	0.947	0.971	0.803	1e-121
224139278	305	predicted protein [Populus trichocarpa]	0.947	0.885	0.760	1e-121
224087827	305	predicted protein [Populus trichocarpa]	0.947	0.885	0.760	1e-120
356532207	301	PREDICTED: sex determination protein tas	0.975	0.923	0.715	1e-115
449439827	308	PREDICTED: short-chain dehydrogenase red	0.989	0.915	0.705	1e-115
356568176	298	PREDICTED: sex determination protein tas	0.975	0.932	0.709	1e-115
357506409	302	Sex determination protein tasselseed-2 [	0.954	0.900	0.716	1e-114
297735587	281	unnamed protein product [Vitis vinifera]	0.915	0.928	0.730	1e-113

>gi|225439592|ref|XP_002265892.1| PREDICTED: sex determination protein tasselseed-2-like [Vitis vinifera]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/286 (76%), Positives = 248/286 (86%), Gaps = 7/286 (2%)

Query: 4   NTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS 63
           N+    Y  LEGKIA+VTGGARGIGEATVRLF +HGAKVVIAD++D  G ALA SL   +
Sbjct: 21  NSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVVIADVEDTLGAALASSL---A 77

Query: 64  PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
           P VT++HCDVSLE+DI+N+IN T+S++GRLDILFNNAGVLGNQSKHKSI DFD +EFD +
Sbjct: 78  PSVTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGNQSKHKSIIDFDIDEFDQV 137

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           +R+NVRG ALG+K+AA+VMVPR  GCIISTASVA +MGGLGPHAYT SKHAIVGLTKNTA
Sbjct: 138 MRVNVRGMALGIKHAARVMVPRGMGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTA 197

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSC----EDCMDSGKPCEEEEEKMEELVRGLAN 239
           CELG+YGIRVNCISPFGVATSMLVNAW+S     EDCM+ G PCE E EKMEE V GLAN
Sbjct: 198 CELGRYGIRVNCISPFGVATSMLVNAWRSSDEEEEDCMNFGIPCEREVEKMEEFVSGLAN 257

Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           LKG  L+A+DIAEAALYLASDESKY+SGHNLVVDGG TTS+NCVGL
Sbjct: 258 LKGHILRAKDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCVGL 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586274|ref|XP_002533789.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223526278|gb|EEF28591.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/280 (75%), Positives = 245/280 (87%), Gaps = 8/280 (2%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + LEGK+AIVTGGARGIGEATVRLF KHGAKVVIAD++D  G  LA+SL   SP VT++H
Sbjct: 27  RRLEGKVAIVTGGARGIGEATVRLFAKHGAKVVIADVEDTPGTILANSL---SPFVTFVH 83

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDVS E+DI+NLIN T+S +GRLDILFNNAG+LGNQ K+KSI +FD +EFD ++R+NV+G
Sbjct: 84  CDVSQEEDIENLINSTVSHYGRLDILFNNAGLLGNQPKNKSILEFDVDEFDRVMRVNVKG 143

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
            ALG+K+AA+VM+PR  GCIISTASVA +MGGLGPHAYT SKHAIVGLTKNTACELG+YG
Sbjct: 144 VALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYG 203

Query: 191 IRVNCISPFGVATSMLVNAWKSCED-----CMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           IRVNCISPFGVATSMLVNAW+S +D     CM+ G PCE+E EKMEE VRGLANLKG TL
Sbjct: 204 IRVNCISPFGVATSMLVNAWRSSDDQEDDECMNFGLPCEQEVEKMEEFVRGLANLKGTTL 263

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           + +DIAEAALYLASDESKY+SGHNLVVDGG TTS+NC+GL
Sbjct: 264 RGKDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCIGL 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145500|ref|XP_002325666.1| predicted protein [Populus trichocarpa] gi|222862541|gb|EEF00048.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/280 (80%), Positives = 252/280 (90%), Gaps = 10/280 (3%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+AI+TGGARGIGEATV+LFV+HGAKVVIADI+DA GIALA+SL   SP   Y+ CD
Sbjct: 2   LEGKVAIITGGARGIGEATVKLFVRHGAKVVIADIEDANGIALAESL---SPSAVYVRCD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V LE++I++LIN+TIS++GRLDILFNNAGVLGNQSKHKSI +FDA+EFDNI+RINVRGAA
Sbjct: 59  VCLEEEIESLINLTISQYGRLDILFNNAGVLGNQSKHKSIINFDADEFDNIMRINVRGAA 118

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LGMK+AA+VMVPRRSGC+ISTASVA ++GGLGPHAYT SKHAIVGLTKNTACEL +YGIR
Sbjct: 119 LGMKHAARVMVPRRSGCVISTASVAGIIGGLGPHAYTASKHAIVGLTKNTACELSRYGIR 178

Query: 193 VNCISPFGVATSMLVNAWKSCED-------CMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           VNCISPFGVATSMLVNAW+ CE+       CMD G P EEE EKMEELVRGL NLKG TL
Sbjct: 179 VNCISPFGVATSMLVNAWRGCEEDGDDDEKCMDFGAPSEEEMEKMEELVRGLGNLKGATL 238

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           KA+DIAEAALYLASDESKY+SGHNLVVDGGFTT KNCVGL
Sbjct: 239 KAKDIAEAALYLASDESKYVSGHNLVVDGGFTTFKNCVGL 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139278|ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|222867664|gb|EEF04795.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/276 (76%), Positives = 247/276 (89%), Gaps = 6/276 (2%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEG++A+VTGGARGIGEATVRLF +HGAKVVIAD++D  G  LA+SL   +P V+++HCD
Sbjct: 33  LEGRVAVVTGGARGIGEATVRLFARHGAKVVIADVEDTLGTLLANSL---APSVSFVHCD 89

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VSLE+DI+NLIN T+S +G+LD+LFNNAGVLGNQSK+KSI +FDA EFD ++++NVRG A
Sbjct: 90  VSLEEDIENLINSTVSHYGKLDVLFNNAGVLGNQSKNKSIVNFDAEEFDRVMQVNVRGVA 149

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG+K+AA+VM+PR  GCIISTASVA +MGGLGPHAYT SKHAIVGLTKNTACELG+YGIR
Sbjct: 150 LGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIR 209

Query: 193 VNCISPFGVATSMLVNAWKSC---EDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           VNCISPFGVATSMLVNAW+S    EDC++ G PCE+E EKME+ VRGLANLKG TL+ARD
Sbjct: 210 VNCISPFGVATSMLVNAWRSGDEEEDCLNFGLPCEKEVEKMEDFVRGLANLKGPTLRARD 269

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           IAEAALYLASDESKY+SGHNLVVDGG TTS+NCVGL
Sbjct: 270 IAEAALYLASDESKYVSGHNLVVDGGITTSRNCVGL 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087827|ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|222854216|gb|EEE91763.1| predicted protein [Populus trichocarpa]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/276 (76%), Positives = 244/276 (88%), Gaps = 6/276 (2%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEG++AIVTGGARGIGEATVRLF + GAKVVIAD++DA G +L +SL   +P V+++HCD
Sbjct: 33  LEGRVAIVTGGARGIGEATVRLFARQGAKVVIADVEDALGTSLVNSL---APSVSFVHCD 89

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VSLE+DI+NLIN TIS++G+LDILFNNAGVLGNQSK+KSI DFD +EFD ++ +NVRG A
Sbjct: 90  VSLEKDIENLINSTISQYGKLDILFNNAGVLGNQSKNKSIVDFDVDEFDRVMHVNVRGMA 149

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG+K+AA+VM+PR  GCIISTASVA +MGGLGPHAYT SKHAIVGLTKNTACELG+YGIR
Sbjct: 150 LGIKHAARVMIPRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIR 209

Query: 193 VNCISPFGVATSMLVNAWKSC---EDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           VNCISPFGVATSMLVNAW+S    ED ++ G P E+E EKME+ VRGLANLKG TL+ARD
Sbjct: 210 VNCISPFGVATSMLVNAWRSSGEEEDSLNFGLPSEKEVEKMEDFVRGLANLKGPTLRARD 269

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           IAEAALYLASDESKY+SGHNLVVDGG TTS NCVGL
Sbjct: 270 IAEAALYLASDESKYVSGHNLVVDGGITTSTNCVGL 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532207|ref|XP_003534665.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/285 (71%), Positives = 245/285 (85%), Gaps = 7/285 (2%)

Query: 5   TEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP 64
           T   + K LEGK+AIVTGGARGIGEATVR+FVKHGAKVVIAD++DAAG  LA++L   SP
Sbjct: 20  TFSPSSKRLEGKVAIVTGGARGIGEATVRVFVKHGAKVVIADVEDAAGGMLAETL---SP 76

Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
             TY+HCDVS+E++++NLI+ TIS++G LDI+FNNAGVLGNQSK+KSI +FD +EFD ++
Sbjct: 77  SATYVHCDVSIEKEVENLISSTISRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVM 136

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
            +NV+G ALG+K+AA+VM+PR  GCI+ST+SVA +MGGLGPHAYT SKHAIVG+TKNTAC
Sbjct: 137 CVNVKGVALGIKHAARVMIPRGVGCIVSTSSVAGVMGGLGPHAYTASKHAIVGITKNTAC 196

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDS----GKPCEEEEEKMEELVRGLANL 240
           ELG+YGIRVNCISPFGVATSMLVNAWK C D  D     G P  EE EK+EE VRGLANL
Sbjct: 197 ELGRYGIRVNCISPFGVATSMLVNAWKPCGDGDDEGINFGVPFPEEVEKIEEFVRGLANL 256

Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           +G TL+A DIA+AALYLASDESKY+SGHNLVVDGG T+S+NC+GL
Sbjct: 257 RGPTLRALDIAQAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439827|ref|XP_004137687.1| PREDICTED: short-chain dehydrogenase reductase 2a-like [Cucumis sativus] gi|449483589|ref|XP_004156632.1| PREDICTED: short-chain dehydrogenase reductase 2a-like [Cucumis sativus]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/289 (70%), Positives = 247/289 (85%), Gaps = 7/289 (2%)

Query: 2   NLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS 61
           N ++    +K LEGK+AIVTGGA+GIGEATVRLF KHGAKVVIAD++D  G ALA++L S
Sbjct: 22  NSSSPPPFHKRLEGKVAIVTGGAKGIGEATVRLFAKHGAKVVIADVEDILGQALANTL-S 80

Query: 62  SSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSK-HKSITDFDANEF 120
            SP V+++HCDVS E D++NL++ T+  HG++DI+FNNAGVLGNQS  HKSI DFD +EF
Sbjct: 81  PSP-VSFVHCDVSSEDDVENLVSTTVCLHGQVDIIFNNAGVLGNQSNSHKSILDFDPDEF 139

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           + ++R+NV+G ALG+K+AA+VM+PR +GCIISTASVA ++GGLGPHAYT SKHAIVGLTK
Sbjct: 140 ERVMRVNVKGVALGIKHAARVMIPRATGCIISTASVAGVLGGLGPHAYTASKHAIVGLTK 199

Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSC----EDCMDSGKPCEEEEEKMEELVRG 236
           NTACELG+YGIRVNCISPFGVATSMLVNAW++     E+CM+ G P   E +KMEE VRG
Sbjct: 200 NTACELGRYGIRVNCISPFGVATSMLVNAWRADVEEEEECMNYGVPSAAEVDKMEEFVRG 259

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           LANLKG TLK +DIA+AALYLASDESKYISGHNLVVDGG TTS+NC+GL
Sbjct: 260 LANLKGPTLKPKDIAQAALYLASDESKYISGHNLVVDGGVTTSRNCIGL 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568176|ref|XP_003552289.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/282 (70%), Positives = 245/282 (86%), Gaps = 4/282 (1%)

Query: 5   TEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP 64
           T   + K LEGK+AIVTGGA+GIGEATVR+FVKHGAKV+IAD++DAAG  LA++L   SP
Sbjct: 20  TFSSSSKRLEGKVAIVTGGAKGIGEATVRVFVKHGAKVMIADVEDAAGAMLAETL---SP 76

Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
             TY+HCDVS+E++++ L++ TIS++G LDI+FNNAGVLGNQSK+KSI +FD +EFD ++
Sbjct: 77  SATYVHCDVSIEKEVEKLVSSTISRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVM 136

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
            +NV+G ALG+K+AA+VM+PR  GCIIST+SVA +MGGLGPHAYT SKHAIVG+TKNTAC
Sbjct: 137 CVNVKGVALGIKHAARVMIPRGIGCIISTSSVAGVMGGLGPHAYTASKHAIVGITKNTAC 196

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCED-CMDSGKPCEEEEEKMEELVRGLANLKGV 243
           ELG+YGIRVNCISPFGVATSMLVNAW+ C+D   + G P  EE EK+EE VRGLANL+G 
Sbjct: 197 ELGRYGIRVNCISPFGVATSMLVNAWRPCDDEGTNFGVPFPEEVEKIEEFVRGLANLRGP 256

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           TL+A DIAEAALYLASDESKY+SGHNLVVDGG T+S+NC+GL
Sbjct: 257 TLRALDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506409|ref|XP_003623493.1| Sex determination protein tasselseed-2 [Medicago truncatula] gi|355498508|gb|AES79711.1| Sex determination protein tasselseed-2 [Medicago truncatula]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/279 (71%), Positives = 237/279 (84%), Gaps = 7/279 (2%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K LEGKIAIVTGGARGIGEATVR+FVKHGAKVVI D++D  GI LA+SL   SP   Y+H
Sbjct: 27  KRLEGKIAIVTGGARGIGEATVRIFVKHGAKVVIGDVEDELGIMLANSL---SPSAIYVH 83

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDVS+E+D++NL+  TIS +G+LDI+FNNAG LGNQSK+KSI +FD  EFD ++ +NV+G
Sbjct: 84  CDVSVEKDVENLVTSTISHYGKLDIMFNNAGFLGNQSKNKSIVNFDTEEFDRVMNVNVKG 143

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
            ALGMK+AAKVM+PR +GCI+ST+SVA ++GGLGPHAYT SKHAIVGLTKN +CELGKYG
Sbjct: 144 VALGMKHAAKVMIPRGNGCIVSTSSVAGVLGGLGPHAYTASKHAIVGLTKNASCELGKYG 203

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDS----GKPCEEEEEKMEELVRGLANLKGVTLK 246
           IRVNCISPFGVATSMLVNAW++ ED +D     G P  EE EKMEE VRG+ NL+G TLK
Sbjct: 204 IRVNCISPFGVATSMLVNAWRNGEDEVDEGINFGLPLIEEVEKMEEFVRGIGNLRGTTLK 263

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
            +DIAEA LYLASDESKY+SGHNLVVDGG T+S+NC+GL
Sbjct: 264 TQDIAEAVLYLASDESKYVSGHNLVVDGGITSSRNCIGL 302

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735587|emb|CBI18081.3| unnamed protein product [Vitis vinifera]

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/282 (73%), Positives = 233/282 (82%), Gaps = 21/282 (7%)

Query: 4   NTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS 63
           N+    Y  LEGKIA+VTGGARGIGEATVRLF +HGAKVVIAD++D  G ALA SL   +
Sbjct: 21  NSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVVIADVEDTLGAALASSL---A 77

Query: 64  PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
           P VT++HCDVSLE+DI+N+IN T+S++GRLDILFNNAGVLGNQSKHKSI DFD +EFD +
Sbjct: 78  PSVTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGNQSKHKSIIDFDIDEFDQV 137

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           +R+NVRG ALG+K+AA+VMVPR  GCIISTASVA +MGGLGPHAYT SKHAIVGLTKNTA
Sbjct: 138 MRVNVRGMALGIKHAARVMVPRGMGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTA 197

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
           CELG+YGIRVNCISPFGVATSML                   E EKMEE V GLANLKG 
Sbjct: 198 CELGRYGIRVNCISPFGVATSML------------------REVEKMEEFVSGLANLKGH 239

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
            L+A+DIAEAALYLASDESKY+SGHNLVVDGG TTS+NCVGL
Sbjct: 240 ILRAKDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCVGL 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.950	0.894	0.640	1.7e-91
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.901	0.749	0.444	2.5e-56
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.905	0.843	0.422	1.4e-55
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.954	0.954	0.423	6.1e-55
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.884	0.980	0.446	3.4e-54
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.884	0.845	0.461	1.5e-53
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.915	0.87	0.405	4.9e-53
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.873	0.968	0.446	3.1e-51
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.873	0.961	0.438	2.2e-50
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.859	0.949	0.437	2.5e-49

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
 Identities = 178/278 (64%), Positives = 210/278 (75%)

Query:    11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXX--XXPLVTY 68
             K LEGK+AI+TGGA GIG+ATV LF +HGA VV                      P+V +
Sbjct:    30 KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query:    69 LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             + CDVS+E D++NL+NVT++++GRLDILFNNAGVLG+Q KHKSI DFDA+EFD+++R+NV
Sbjct:    90 ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query:   129 RGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
             RG  LGMK+ A+ M+ R   GCIISTASVA +MGG+GPHAYT SKHAIVGLTKN ACELG
Sbjct:   150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query:   188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
             KYGIRVNCISPFGVATSMLVNAW+        G             VR LANLKG TL+A
Sbjct:   210 KYGIRVNCISPFGVATSMLVNAWRKTS----GGDVEDDDVEEMEEFVRSLANLKGETLRA 265

Query:   248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
              DIAEAALYLASDESKY++GHNLVVDGG TT++NCVGL
Sbjct:   266 NDIAEAALYLASDESKYVNGHNLVVDGGVTTARNCVGL 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 120/270 (44%), Positives = 163/270 (60%)

Query:    11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
             + LEGK+A++TGGA GIG+AT   F+ HGAKV+                    P   Y  
Sbjct:    76 RKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELG---PSCAYFP 132

Query:    71 CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
             CDV+ E DI N ++  +S H +LDI++NNAG+        SI D D N FD +I  NVRG
Sbjct:   133 CDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPP--SIVDLDLNVFDKVINTNVRG 190

Query:   131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                G+K+AA+VM+PR SG II   SV  +MGGL  H Y+VSK A++G+ ++TA EL K+ 
Sbjct:   191 VMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHR 250

Query:   191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
             IRVNCISPF + TS +++  +     +D  +           +V+    L G   +  D+
Sbjct:   251 IRVNCISPFAITTSFVMDEMRQIYPGVDDSR--------LIQIVQSTGVLNGEVCEPTDV 302

Query:   251 AEAALYLASDESKYISGHNLVVDGGFTTSK 280
             A AA+YLASD+SKY++GHNLVVDGGFTT K
Sbjct:   303 ANAAVYLASDDSKYVNGHNLVVDGGFTTVK 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 114/270 (42%), Positives = 168/270 (62%)

Query:    11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
             K LEGK+A++TGGA G+G+AT   F++HGA+VV                      V    
Sbjct:    39 KKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFV---R 95

Query:    71 CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
             CDV++E DI   + +T+ ++G+LD+++NNAG++G  +   SI+  D  EF+ ++RINV G
Sbjct:    96 CDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTP-ASISQLDMTEFERVMRINVFG 154

Query:   131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                G+K+AAK M+P RSGCI+ T+SVA + GGL PH+YT+SK    G+ K+ A EL ++G
Sbjct:   155 VVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHG 214

Query:   191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
             +R+NCISP  VAT + ++  +     +   K            V+G+  LKG   +  D+
Sbjct:   215 VRINCISPGTVATPLTLSYLQKVFPKVSEEK--------LRETVKGMGELKGAECEEADV 266

Query:   251 AEAALYLASDESKYISGHNLVVDGGFTTSK 280
             A+AALYLAS++ KY++GHNLVVDGG T  K
Sbjct:   267 AKAALYLASNDGKYVTGHNLVVDGGMTAFK 296

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 122/288 (42%), Positives = 171/288 (59%)

Query:     1 MNLNTEKKAYKTLE-----GKIAIVTGGARGIGEATVRLFVKHGAKV--VXXXXXXXXXX 53
             M+ NTE  +Y +L      GK+A++TGGA GIGE+ VRLF KHGAKV  V          
Sbjct:     1 MSTNTESSSYSSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEV 60

Query:    54 XXXXXXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT 113
                           ++H DV +E DI N ++  +   G LDIL NNAG+ G  +    I 
Sbjct:    61 CKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCG--APCPDIR 118

Query:   114 DFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH 173
             ++  +EF+    +NV+GA L MK+AA+VM+P + G I+S  SV  ++GG+GPH+Y  SKH
Sbjct:   119 NYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKH 178

Query:   174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXL 233
             A++GLT++ A ELG++GIRVNC+SP+ VAT + +      E   D+              
Sbjct:   179 AVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDA-------FVGFRNF 231

Query:   234 VRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
                 ANLKGV L   D+A A L+LASD+S+YISG NL++DGGFT + +
Sbjct:   232 AAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNH 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 121/271 (44%), Positives = 165/271 (60%)

Query:    11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
             K L+GKI I+TGGA GIG  +VRLF +HGA+VV                       +Y H
Sbjct:     4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDK--ASYYH 61

Query:    71 CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
             CDV+ E +++N +  T+ K+G+LD+LF+NAGV+       SI D + NE D  I IN+RG
Sbjct:    62 CDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI---EPFVSILDLNLNELDRTIAINLRG 118

Query:   131 AALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              A  +K+AA+ MV +   G I+ T SVA+ + G  PH YT SKH ++GL K+ +  LGKY
Sbjct:   119 TAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKY 178

Query:   190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
             GIRVN ++PFGVAT ++ N +K   + ++                   ANLKG+ LKAR 
Sbjct:   179 GIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSAS-------------ANLKGIVLKARH 225

Query:   250 IAEAALYLASDESKYISGHNLVVDGGFTTSK 280
             +AEAAL+LASDES Y+SG NL VDGG++  K
Sbjct:   226 VAEAALFLASDESAYVSGQNLAVDGGYSVVK 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 125/271 (46%), Positives = 167/271 (61%)

Query:    11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
             + L+GKIAI+TGGA GIG   VRLF  HGAKVV                       ++  
Sbjct:    42 QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDK--ASFYR 99

Query:    71 CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
             C+V+ E D++N +  T+ KHG+LD+LF+NAGVL       S+ D D   FD  + +NVRG
Sbjct:   100 CNVTDETDVENAVKFTVEKHGKLDVLFSNAGVL---EAFGSVLDLDLEAFDRTMAVNVRG 156

Query:   131 AALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
             AA  +K+AA+ MV   + G I+ T S+A+ +GG GPH+YT SKHA++GL ++    LG+Y
Sbjct:   157 AAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQY 216

Query:   190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
             GIRVN ++P+GVAT M  +A+   E+ +   +               L NLKGV LKAR 
Sbjct:   217 GIRVNGVAPYGVATGM-TSAYN--EEAVKMLEEYG----------EALGNLKGVVLKARH 263

Query:   250 IAEAALYLASDESKYISGHNLVVDGGFTTSK 280
             IAEAAL+LASD+S YISG NLVVDGGF+  K
Sbjct:   264 IAEAALFLASDDSVYISGQNLVVDGGFSVVK 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 110/271 (40%), Positives = 165/271 (60%)

Query:    11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
             + LEGK+A++TGGA GIG+AT   FV  GA+V+                        +L 
Sbjct:    34 RKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAH---FLR 90

Query:    71 CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
             CDV+ E+ I   +   +++HG+LD++ N+AG+  + S   SI D D + +D ++R+NVRG
Sbjct:    91 CDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISP-PSIADLDMDTYDKVMRLNVRG 149

Query:   131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               LG+K+AA+ M+P  SG I+  +S++ LMGGLGPHAY++SK  I G+ K  A EL K+G
Sbjct:   150 TVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHG 209

Query:   191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
             +R+NCISP G+ T + +  ++       +G            +V     LKG   +  D+
Sbjct:   210 LRINCISPAGIPTPLTLRMFREAF----AGH--SIREEQLLAIVNATGELKGEKCEEIDV 263

Query:   251 AEAALYLASDESKYISGHNLVVDGGFTTSKN 281
             A+AALYLASD++K+++GHNLVVDGGFT  K+
Sbjct:   264 AKAALYLASDDAKFVTGHNLVVDGGFTCFKS 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 120/269 (44%), Positives = 166/269 (61%)

Query:    13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
             L+GKIAI+TGGA GIG   VRLF  HGAKVV                       ++  CD
Sbjct:     6 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDK--ASFYRCD 63

Query:    73 VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
             V+ E++++N +  T+ K+G+LD+LF+NAGV+       S  D +  +FD  + +NVRGAA
Sbjct:    64 VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG---SFLDLNLEQFDRTMAVNVRGAA 120

Query:   133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +K+AA+ MV + + G I+ T SVAS +GG GPHAYT SKHA++GL K+    LGKYGI
Sbjct:   121 AFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGI 180

Query:   192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
             RVN ++P+ VAT+  +N+    E+ +   +              G+  LKGV LKAR +A
Sbjct:   181 RVNGVAPYAVATA--INSRD--EETVRMVEEYSAAT--------GI--LKGVVLKARHVA 226

Query:   252 EAALYLASDESKYISGHNLVVDGGFTTSK 280
             EAAL+LASD+S Y+SG NL VDGG++  K
Sbjct:   227 EAALFLASDDSAYVSGQNLAVDGGYSVVK 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 118/269 (43%), Positives = 160/269 (59%)

Query:    13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
             L+GKI I+TGGA GIG    RLF  HGAKVV                       ++  CD
Sbjct:     6 LDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDK--ASFYRCD 63

Query:    73 VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
             ++ E +++N +  T+ KHG+LD+LF+NAGV+     H SI D D   FD  + +NVRGAA
Sbjct:    64 ITDETEVENAVKFTVEKHGKLDVLFSNAGVM---EPHGSILDLDLEAFDRTMAVNVRGAA 120

Query:   133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +K+AA+ MV   + G I+ T SV + +GG GPH+YT SKHA++GL ++    LGKYGI
Sbjct:   121 AFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGI 180

Query:   192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
             RVN ++P+GVAT +     ++ +   D    C              A LKGV LKAR +A
Sbjct:   181 RVNGVAPYGVATGLTSYNEETVKMVEDY---CSAT-----------AILKGVVLKARHVA 226

Query:   252 EAALYLASDESKYISGHNLVVDGGFTTSK 280
             +AAL+LASD+S YISG NL VDGG++  K
Sbjct:   227 DAALFLASDDSVYISGQNLGVDGGYSVVK 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 119/272 (43%), Positives = 161/272 (59%)

Query:    13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
             LEGKI I+TGGA GIG    RLF  HGAKVV                       ++  CD
Sbjct:     6 LEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDK--ASFYRCD 63

Query:    73 VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
             V+ E ++++ +  T+ KHG+LD+LF+NAGVL      +S  DFD   FD I+ +NVRGAA
Sbjct:    64 VTNETEVEDAVKFTVEKHGKLDVLFSNAGVL---EPLESFLDFDLERFDRIMAVNVRGAA 120

Query:   133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +K+AA+ MV + + G I+ T SV++ +GG G H YT SKH +VGL ++   +LGKYGI
Sbjct:   121 AFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGI 179

Query:   192 RVNCISPFGVATSMLVN---AWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKAR 248
             RVN ++P+ VAT M  +     K  ED  D+               +G+  LKG+ LKA 
Sbjct:   180 RVNGVAPYAVATPMTSHDEVTGKQLEDYFDA---------------KGI--LKGMVLKAS 222

Query:   249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
              +A+ AL+LASD+S YISG NL VDGG+T  K
Sbjct:   223 HVAQVALFLASDDSAYISGQNLAVDGGYTVVK 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3T046	BDH2_BOVIN	1, ., 1, ., 1, ., 3, 0	0.3308	0.8421	0.9795	yes	no
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.3157	0.8561	0.9838	yes	no
Q937L4	CPNA_COMTE	1, ., 1, ., 1, ., 1, 6, 3	0.3143	0.8421	0.96	yes	no
P46331	YXBG_BACSU	1, ., -, ., -, ., -	0.3384	0.8736	0.9120	yes	no
Q9SCU0	SDR2A_ARATH	1, ., 1, ., 1, ., -	0.6978	0.9508	0.8943	yes	no
P50160	TS2_MAIZE	No assigned EC number	0.6262	0.9543	0.8095	N/A	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3726	0.8175	0.8961	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3726	0.8175	0.8961	yes	no
D4A1J4	BDH2_RAT	1, ., 1, ., 1, ., 3, 0	0.3246	0.8350	0.9714	yes	no
Q5RCF8	DHRS4_PONAB	1, ., 1, ., 1, ., 1, 8, 4	0.3246	0.8385	0.8597	yes	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.3283	0.8385	0.8597	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3492	0.8842	0.9581	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3394	0.8175	0.9395	yes	no
Q56318	Y019_THEMA	1, ., -, ., -, ., -	0.3582	0.8596	0.9570	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.5.1	LOW CONFIDENCE prediction!
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.n1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.295	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	285
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-122
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-100
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-74
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-69
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-65
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-63
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	9e-63
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-62
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-59
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-59
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-57
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-52
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-52
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-52
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-51
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-51
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-51
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-51
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-49
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-49
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-48
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-47
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-47
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-47
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-47
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-46
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-46
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-46
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-45
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	7e-45
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	8e-45
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	8e-45
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-44
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-44
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-43
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-43
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-42
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-42
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-42
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-42
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	8e-42
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-41
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-41
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-41
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	8e-41
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	9e-41
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-40
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-40
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-40
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-40
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-40
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	7e-40
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-39
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	9e-39
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-38
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-38
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-38
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	8e-38
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-37
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-37
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	6e-37
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-37
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-36
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-36
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	3e-36
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	6e-36
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-35
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-35
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-35
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-35
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-35
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-35
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-35
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-34
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-34
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-34
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-34
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-34
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-34
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-34
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-33
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-33
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-33
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-33
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-33
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-33
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-32
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-32
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-32
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	6e-32
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	7e-32
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-31
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	5e-31
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-31
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	9e-31
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-30
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-30
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-30
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-30
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	7e-30
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-29
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-29
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-29
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	6e-29
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-28
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-28
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-28
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-28
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-28
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-28
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	4e-28
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-28
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	9e-28
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-27
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-27
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-27
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-27
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-27
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-27
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-27
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	4e-27
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	6e-27
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-27
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-26
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-26
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-26
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-26
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-26
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-26
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-25
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-25
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-25
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-25
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-25
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-25
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	5e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	6e-25
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-24
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-24
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-24
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	7e-24
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-23
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-23
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-23
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-23
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	4e-23
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-23
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-22
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-22
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-22
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-22
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-22
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	6e-22
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	8e-22
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	9e-22
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-21
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-21
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-21
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-21
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-21
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-21
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	7e-21
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-21
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-20
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-20
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-20
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-20
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-19
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-19
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-19
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	3e-19
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-19
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	5e-19
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	8e-19
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-18
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-18
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-18
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-17
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	5e-17
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	5e-17
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	5e-17
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-17
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-16
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-16
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-16
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-16
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-16
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	5e-16
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	6e-16
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	6e-16
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-15
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-15
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-15
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-15
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-15
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	6e-15
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-15
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	4e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	7e-14
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-14
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-13
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	3e-13
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	4e-13
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	1e-12
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-12
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-12
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	8e-12
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	5e-11
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	6e-11
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	7e-11
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	7e-11
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-10
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-10
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-09
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-09
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-09
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	5e-09
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	8e-09
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	9e-09
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-08
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	2e-08
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	4e-08
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	5e-08
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-07
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	2e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-07
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	7e-07
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	7e-07
pfam08659	181	pfam08659, KR, KR domain	8e-07
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-06
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	8e-06
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-05
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	4e-05
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	8e-05
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	8e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	9e-05
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	1e-04
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	2e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.003
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.003
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  349 bits (898), Expect = e-122
 Identities = 146/265 (55%), Positives = 193/265 (72%), Gaps = 17/265 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+AI+TGGA GIGEAT RLF KHGA+VVIADIDD AG A+A  L    P ++++HCD
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGD--PDISFVHCD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V++E D++  ++  +++ GRLDI+FNNAGVLG      SI +    EF+ ++ +NV GA 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCY--SILETSLEEFERVLDVNVYGAF 117

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG K+AA+VM+P + G I+S ASVA ++GGLGPHAYT SKHA++GLT++ A ELG++GIR
Sbjct: 118 LGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIR 177

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VNC+SP+GVAT +L   +               E+E +EE VRG ANLKG  L+  DIA 
Sbjct: 178 VNCVSPYGVATPLLTAGFGV-------------EDEAIEEAVRGAANLKGTALRPEDIAA 224

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           A LYLASD+S+Y+SG NLVVDGG T
Sbjct: 225 AVLYLASDDSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  293 bits (751), Expect = e-100
 Identities = 131/276 (47%), Positives = 180/276 (65%), Gaps = 24/276 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L GK+A+VTGGA GIGE+ VRLF KHGAKV I D+ D  G  + DSL    P V + H
Sbjct: 14  QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL-GGEPNVCFFH 72

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV++E D+   ++ T+ K G LDI+ NNAG+ G       I + + +EF+ +  +NV+G
Sbjct: 73  CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG--PPCPDIRNVELSEFEKVFDVNVKG 130

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             LGMK+AA++M+P + G I+S  SVAS +GGLGPHAYT SKHA++GLT++ A ELGK+G
Sbjct: 131 VFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHG 190

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE-------LVRGLANLKGV 243
           IRVNC+SP+ V T++ +                  E+E+ E+            ANLKGV
Sbjct: 191 IRVNCVSPYAVPTALAL--------------AHLPEDERTEDALAGFRAFAGKNANLKGV 236

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            L   D+A A L+LASDE++YISG NL++DGGFT +
Sbjct: 237 ELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT 272

Length = 280

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  227 bits (580), Expect = 3e-74
 Identities = 100/266 (37%), Positives = 144/266 (54%), Gaps = 23/266 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHC 71
           L GK+AIVTG + GIG A   L  K GAKVVIA DI++ A   L + +         +  
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS E+D++NL+   + K G++DIL NNAG+    S    +TD    E+D +I +N+ G 
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDILVNNAGI----SNFGLVTDMTDEEWDRVIDVNLTGV 118

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  +YA   M+ R+SG I++ +S+  L+G      Y+ SK A+   TK  A EL   GI
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P  + T M    W S           EE++E + E         G   K  +IA
Sbjct: 179 RVNAVAPGAIDTEM----WSS---------FSEEDKEGLAEE--IPLGRLG---KPEEIA 220

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
           +  L+LASD++ YI+G  + VDGG+T
Sbjct: 221 KVVLFLASDDASYITGQIITVDGGWT 246

Length = 247

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  214 bits (546), Expect = 3e-69
 Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 22/256 (8%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
           A+VTG + GIG A  R   + GAKVV+AD ++ A   LA  + +       +  DVS E+
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA-IEALGGNAVAVQADVSDEE 59

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
           D++ L+   + + GRLDIL NNAG+         + +    ++D ++ +N+ G  L  + 
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARP----GPLEELTDEDWDRVLDVNLTGVFLLTRA 115

Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
           A   M  +  G I++ +SVA L    G  AY  SK A+ GLT++ A EL  YGIRVN ++
Sbjct: 116 ALPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVA 175

Query: 198 PFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYL 257
           P  V T ML                      +  E     A   G      ++AEA ++L
Sbjct: 176 PGLVDTPMLAKLG-----------------PEEAEKELAAAIPLGRLGTPEEVAEAVVFL 218

Query: 258 ASDESKYISGHNLVVD 273
           ASDE+ YI+G  + VD
Sbjct: 219 ASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  203 bits (520), Expect = 4e-65
 Identities = 99/269 (36%), Positives = 135/269 (50%), Gaps = 26/269 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+AIVTG + GIGE   R F   GA+VV+ D ++ A   +A + + +      +  D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVA-AEILAGGRAIAVAAD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS E D++  +   + + G +DIL NNAG      ++  + D D  EFD I  +NV+   
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGT---THRNGPLLDVDEAEFDRIFAVNVKSPY 118

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  + A   M     G I++ AS A L    G   Y  SK A++ LTK  A ELG   IR
Sbjct: 119 LWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIR 178

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----AR 248
           VN ++P  V T +L       E  M  G+P  E   K          L  + L       
Sbjct: 179 VNAVAPVVVETGLL-------EAFM--GEPTPENRAKF---------LATIPLGRLGTPE 220

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           DIA AAL+LASDE+ +I+G  LVVDGG  
Sbjct: 221 DIANAALFLASDEASWITGVTLVVDGGRC 249

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  198 bits (506), Expect = 5e-63
 Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 30/269 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
            +L+GK A+VTG +RGIG A        GAKVVI D ++ A  ALA  L ++      L 
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS E  ++ LI   +   G LDIL NNAG+  +      +      ++D +I +N+ G
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRD----ALLPRMSEEDWDRVIDVNLTG 116

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               ++ A   M+  R G I++ +SV+ + G  G   Y+ +K  ++G TK  A EL   G
Sbjct: 117 TFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRG 176

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL----K 246
           I VN ++P  + T M                      E + E V+    LK + L    +
Sbjct: 177 ITVNAVAPGFIDTDMT---------------------EGLPEEVKAEI-LKEIPLGRLGQ 214

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGG 275
             ++A A  +LASD + YI+G  + V+GG
Sbjct: 215 PEEVANAVAFLASDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  197 bits (504), Expect = 9e-63
 Identities = 95/268 (35%), Positives = 134/268 (50%), Gaps = 26/268 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+AIVTGGARG+G A  RL V  GAKVV++DI D  G A A  L  ++    + H D
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAA---RFFHLD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E     +++      GRLD+L NNAG+L       ++      E+  ++ IN+ G  
Sbjct: 60  VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTG----GTVETTTLEEWRRLLDINLTGVF 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK--YG 190
           LG +     M     G II+ +S+  L+G     AY  SK A+ GLTK+ A E     YG
Sbjct: 116 LGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYG 175

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN + P  + T M      +  +  +                       G   +  +I
Sbjct: 176 IRVNSVHPGYIYTPMTDELLIAQGEMGNYPN-----------------TPMGRAGEPDEI 218

Query: 251 AEAALYLASDESKYISGHNLVVDGGFTT 278
           A A +YLASDES +++G  LVVDGG+T 
Sbjct: 219 AYAVVYLASDESSFVTGSELVVDGGYTA 246

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  196 bits (501), Expect = 3e-62
 Identities = 102/267 (38%), Positives = 144/267 (53%), Gaps = 18/267 (6%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
            T  GK+A+VTGGA GIG AT   F + GAKVV+AD D A G      +  +     ++ 
Sbjct: 3   MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA 62

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ + +++ L+  TI+ +GRLD  FNNAG+   Q +   + +    EFD I+ +NV+G
Sbjct: 63  CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGR---LAEGSEAEFDAIMGVNVKG 119

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             L MKY   +M+ +  G I++TASVA L        Y  SKHA++GLTK+ A E  K G
Sbjct: 120 VWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKG 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN + P  + T M   A+             E +  K E       +  G   K  ++
Sbjct: 180 IRVNAVCPAVIDTDMFRRAY-------------EADPRKAEFAAA--MHPVGRIGKVEEV 224

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A A LYL SD + + +GH L+VDGG T
Sbjct: 225 ASAVLYLCSDGASFTTGHALMVDGGAT 251

Length = 253

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  189 bits (482), Expect = 2e-59
 Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 26/270 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA---DIDDAAGIALADSLLSSSPLVTYL 69
           L GK+A+VTG + GIG A  R   + GA+VV+A     ++AA    A    +       +
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 70  HCDVS-LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             DVS  E+ ++ L+     + GR+DIL NNAG+ G       + +    ++D +I +N+
Sbjct: 63  AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAG---PDAPLEELTEEDWDRVIDVNL 119

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            GA L  + A  +M  +R   I++ +SVA L G  G  AY  SK A++GLTK  A EL  
Sbjct: 120 LGAFLLTRAALPLMKKQR---IVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            GIRVN ++P  + T M                    E E ++ L   +    G      
Sbjct: 177 RGIRVNAVAPGYIDTPMTAALE-------------SAELEALKRLAARIP--LGRLGTPE 221

Query: 249 DIAEAALYLASD-ESKYISGHNLVVDGGFT 277
           ++A A  +LASD  + YI+G  L VDGG  
Sbjct: 222 EVAAAVAFLASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  187 bits (478), Expect = 9e-59
 Identities = 87/270 (32%), Positives = 129/270 (47%), Gaps = 31/270 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHC 71
           LEGK+A+VTG +RGIG A        GA VVI      AG  AL   + +       +  
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS  + ++  ++   ++ G +DIL NNAG+     +   +      ++D +I  N+ G 
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGIT----RDNLLMRMKEEDWDRVIDTNLTGV 118

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               K  A+ M+ +RSG II+ +SV  LMG  G   Y  SK  ++G TK+ A EL   GI
Sbjct: 119 FNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGI 178

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
            VN ++P  + T M            D+    E+ +E +         L  + L      
Sbjct: 179 TVNAVAPGFIETDMT-----------DALP--EDVKEAI---------LAQIPLGRLGQP 216

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            +IA A  +LASDE+ YI+G  L V+GG  
Sbjct: 217 EEIASAVAFLASDEAAYITGQTLHVNGGMV 246

Length = 248

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  184 bits (470), Expect = 2e-57
 Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 16/269 (5%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            L+GK+A+VTG A GIG        K GAKVVIAD++D A  A A++L  +      +  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVRG 130
           DV+ E+ I   I+  +   G +DIL NNAG+     +H + I DF   ++  +I I + G
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGI-----QHVAPIEDFPTEKWKKMIAIMLDG 115

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A L  K A  +M  +  G II+ ASV  L+G  G  AY  +KH ++GLTK  A E   +G
Sbjct: 116 AFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHG 175

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE--EEKMEELVRGLANLKGVTLKAR 248
           + VN I P  V T  LV   K   D        EEE  E+ +  LV      +       
Sbjct: 176 VTVNAICPGYVDTP-LVR--KQIPDLAKERGISEEEVLEDVLLPLV-----PQKRFTTVE 227

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           +IA+ AL+LAS  +K ++G   VVDGG+T
Sbjct: 228 EIADYALFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  172 bits (437), Expect = 1e-52
 Identities = 84/272 (30%), Positives = 123/272 (45%), Gaps = 28/272 (10%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + LEG++A+VTG ARGIG A        GA+V++ DI      A A+ + ++        
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV     ++  +   +   GRLDIL  NAG+           + D  +++ +I +N+ G
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTP----FAEMDDEQWERVIDVNLTG 117

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSKHAIVGLTKNTACELGKY 189
             L  + A   ++    G I+ T+SVA    G  G   Y  SK  +VG T+  A EL   
Sbjct: 118 TFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAAR 177

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN---LKGVTLK 246
            I VN + P GV T M  N                       +    +A    L  +  +
Sbjct: 178 NITVNSVHPGGVDTPMAGN-------------------LGDAQWAEAIAAAIPLGRL-GE 217

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
             DIA A L+LASDE++YI+G  L VDGG T 
Sbjct: 218 PEDIAAAVLFLASDEARYITGQTLPVDGGATL 249

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  171 bits (436), Expect = 1e-52
 Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 23/265 (8%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLH 70
           +L G++A+VTG ARG+G A      + GA VV+    D+ A   L +++ +       + 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+ +  ++  +   + + GR+DIL NNAG+  +    K + D   +E+D +I +N+ G
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED----KPLADMSDDEWDEVIDVNLSG 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               ++     M  +R G I++ +SVA L G  G   Y  +K  +VGLTK  A EL +YG
Sbjct: 119 VFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           I VN ++P  + T M                  EE  E  +          G      DI
Sbjct: 179 ITVNMVAPGDIDTDMK-------------EATIEEAREAKDAET--PLGRSG---TPEDI 220

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A A  +L SD S YI+G  + V GG
Sbjct: 221 ARAVAFLCSDASDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  170 bits (433), Expect = 4e-52
 Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 24/267 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L+GK+A+VTG +RGIG        + GA +VI   ++      A  L+    +  T   C
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKA-EEAQQLIEKEGVEATAFTC 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS E+ I+  +       G++DIL NNAG+     +H +  +F   E+ ++I +N+ G 
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGI---IRRHPAE-EFPEAEWRDVIDVNLNGV 117

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +  A+ M+ +  G II+  S+ S +GG    AY  SK  + GLTK  A E  ++GI
Sbjct: 118 FFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGI 177

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV-RGLANLKGVTLKARDI 250
           +VN I+P   AT M               +    + E  ++++ R  A   G      D+
Sbjct: 178 QVNAIAPGYFATEMT--------------EAVVADPEFNDDILKRIPAGRWGQ---PEDL 220

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
             AA++LASD S Y++G  + VDGG+ 
Sbjct: 221 VGAAVFLASDASDYVNGQIIFVDGGWL 247

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  169 bits (430), Expect = 1e-51
 Identities = 93/268 (34%), Positives = 140/268 (52%), Gaps = 17/268 (6%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            L G++AIVTG   GIG AT +LF + GA+VV+AD D  A   +A ++ +          
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFA-RQG 60

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV   + ++ L++   ++ GRLD+L NNAG         ++   D  ++D ++R+NV G 
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGF----GCGGTVVTTDEADWDAVMRVNVGGV 116

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  KYA  +M  +  G I++TAS  +L GG G  AY  SK AI  LT+  A +    GI
Sbjct: 117 FLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGI 176

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P  + T      +    D            E + E +R    +      A ++A
Sbjct: 177 RVNAVAPGTIDTPYFRRIFARHAD-----------PEALREALRARHPMNRFG-TAEEVA 224

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTS 279
           +AAL+LASDES + +G  LVVDGG+  +
Sbjct: 225 QAALFLASDESSFATGTTLVVDGGWLAA 252

Length = 252

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  168 bits (428), Expect = 2e-51
 Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 15/262 (5%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL--HCDV 73
           K+ ++TGG  G+G AT     K GAK+ + D+++    A   +LL  +P    L    DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           S E  ++  ++ T+ + GR+D  FNNAG+ G Q+      DF A+EFD ++ IN+RG   
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQN---LTEDFGADEFDKVVSINLRGVFY 120

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           G++   KVM  + SG I++TASV  + G      Y  +KH +VGLT+N+A E G+YGIR+
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           N I+P  + T M+  + K     +    P E  EE +        N      +  ++A  
Sbjct: 181 NAIAPGAILTPMVEGSLKQ----LGPENPEEAGEEFVS------VNPMKRFGEPEEVAAV 230

Query: 254 ALYLASDESKYISGHNLVVDGG 275
             +L SD++ Y++   + +DGG
Sbjct: 231 VAFLLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  168 bits (427), Expect = 3e-51
 Identities = 96/264 (36%), Positives = 128/264 (48%), Gaps = 22/264 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+AIVTG   G GE   R F + GA+VVIADI+      +A  +         +  D
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI---GEAAIAIQAD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+   D++ ++   +SK GRLDIL NNAG+     ++K + + D  EFD +  +NV+   
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGI---THRNKPMLEVDEEEFDRVFAVNVKSIY 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  +     M  +  G II+ AS A L    G   Y  SK  +V  TK  A EL    IR
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK-GVTLKARDIA 251
           VNC+ P    T +L          M    P        E   +  A +  G      DIA
Sbjct: 177 VNCLCPVAGETPLL-------SMFMGEDTP--------ENRAKFRATIPLGRLSTPDDIA 221

Query: 252 EAALYLASDESKYISGHNLVVDGG 275
            AALYLASDE+ +I+G  L VDGG
Sbjct: 222 NAALYLASDEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  168 bits (427), Expect = 3e-51
 Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+A+VTG +RGIG A        GAKV + D  + A     + + +       L  DVS 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
            + ++ L+    ++ G +DIL NNAG+    ++   +      ++D +I +N+ G     
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGI----TRDNLLMRMSEEDWDAVINVNLTGVFNVT 116

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +   + M+ RRSG II+ +SV  L+G  G   Y  SK  ++G TK+ A EL   GI VN 
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----ARDIA 251
           ++P  + T M                  E+ +EK+         LK + L       ++A
Sbjct: 177 VAPGFIDTDMT-------------DALPEKVKEKI---------LKQIPLGRLGTPEEVA 214

Query: 252 EAALYLASDESKYISGHNLVVDGG 275
            A  +LASD++ YI+G  L V+GG
Sbjct: 215 NAVAFLASDDASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  163 bits (413), Expect = 3e-49
 Identities = 91/263 (34%), Positives = 133/263 (50%), Gaps = 17/263 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+AIVTG   GIG A      + GA+VV+ADID  A  A+   +   +  +     D
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALR---VD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ EQ +  L    + + G LD+L NNAG +       +I D D   +D  + IN+RG  
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAM---HLTPAIIDTDLAVWDQTMAINLRGTF 114

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  ++AA  M+ R  G I++ +S+A   G  G  AY  SK AI  LT+  A EL   GIR
Sbjct: 115 LCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIR 174

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N ++P  + T +L+      E  +  G            L+     L+G   +  D+A 
Sbjct: 175 CNALAPGLIDTPLLLAKLAGFEGALGPGG---------FHLLI--HQLQGRLGRPEDVAA 223

Query: 253 AALYLASDESKYISGHNLVVDGG 275
           A ++L SD++ +I+G  L VDGG
Sbjct: 224 AVVFLLSDDASFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  162 bits (411), Expect = 8e-49
 Identities = 84/264 (31%), Positives = 126/264 (47%), Gaps = 21/264 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK A+VTG ARG+G A      + GA V   D   A    LA +L ++      +  D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++    +Q   +   +  G LD L NNAG+       KS T+ D + +D ++ +NVRG  
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGIT----NSKSATELDIDTWDAVMNVNVRGTF 120

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L ++ A   +     G I++ AS  +L G     AY  SK A++G+T++ A ELG  GI 
Sbjct: 121 LMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGIT 180

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN I+P   AT                  P +E      +  R L  L+       D+A 
Sbjct: 181 VNAIAPGLTATEATAYV------------PADERHAYYLKG-RALERLQVP----DDVAG 223

Query: 253 AALYLASDESKYISGHNLVVDGGF 276
           A L+L SD +++++G  L V+GGF
Sbjct: 224 AVLFLLSDAARFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  159 bits (405), Expect = 7e-48
 Identities = 84/273 (30%), Positives = 130/273 (47%), Gaps = 13/273 (4%)

Query: 5   TEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP 64
           +     K L+G   +VTGGA GIG A    F + GA+V + D+ +AA  A A  L  +  
Sbjct: 1   SAIDLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAK- 59

Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
            VT    DV+    ++ + +  + + G LD+L NNAG+ G       I +    +++  +
Sbjct: 60  -VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAG---PTGGIDEITPEQWEQTL 115

Query: 125 RINVRGAALGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
            +N+ G     + A  ++     G  II+ +SVA  +G  G   Y  SK A+VGL K+ A
Sbjct: 116 AVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLA 175

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            ELG  GIRVN I P  V    +              +      ++ME+      +L   
Sbjct: 176 IELGPLGIRVNAILPGIVRGPRMRR------VIEARAQQLGIGLDEMEQEYLEKISLGR- 228

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
            ++  DIA  AL+LAS  ++YI+G  + VDG  
Sbjct: 229 MVEPEDIAATALFLASPAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  159 bits (404), Expect = 1e-47
 Identities = 98/268 (36%), Positives = 139/268 (51%), Gaps = 28/268 (10%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            L GK+A+VTGGA GIG A   LF   GA+V + D        +A  LL  +     L C
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-EDVAEVAAQLLGGN--AKGLVC 68

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS  Q ++  +   IS  GR+DIL N+AGV    +  + +++ D   +D  I IN++G+
Sbjct: 69  DVSDSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVSEED---WDKTIDINLKGS 124

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  +   + M+    G I++ AS A ++      AY  SK  +VG+TK  A E G YGI
Sbjct: 125 FLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGI 184

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL--VRGLANLKGVTLKARD 249
            VN ISP  V T +   AW        +G    E+ E+ ++L      A          +
Sbjct: 185 TVNAISPTVVLTELGKKAW--------AG----EKGERAKKLIPAGRFA-------YPEE 225

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA AAL+LASD +  I+G NLV+DGG+T
Sbjct: 226 IAAAALFLASDAAAMITGENLVIDGGYT 253

Length = 255

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  158 bits (402), Expect = 1e-47
 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 31/263 (11%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLE 76
           A+VTG +RGIG A      K GAKV+I     +     + + L +       + CDVS  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           +D++ ++     + G +DIL NNAG+    ++   +      ++D +I  N+ G     +
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGI----TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQ 116

Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
              ++M+ +RSG II+ +SV  LMG  G   Y  SK  ++G TK+ A EL    I VN +
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----ARDIAE 252
           +P  + T M             + K  E+ ++K+         L  + L       ++A 
Sbjct: 177 APGFIDTDM-------------TDKLSEKVKKKI---------LSQIPLGRFGTPEEVAN 214

Query: 253 AALYLASDESKYISGHNLVVDGG 275
           A  +LASDE+ YI+G  + VDGG
Sbjct: 215 AVAFLASDEASYITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  157 bits (400), Expect = 3e-47
 Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 25/267 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G++A++TGG  GIG AT R     GA VV+ DID  AG A AD +        ++  D
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----GGLFVPTD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E  +  L +     +G +DI FNNAG+  +  +  SI +   + +  +  +N+    
Sbjct: 60  VTDEDAVNALFDTAAETYGSVDIAFNNAGI--SPPEDDSILNTGLDAWQRVQDVNLTSVY 117

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
           L  K A   MV +  G II+TAS  ++MG      +YT SK  ++ +++    +  + GI
Sbjct: 118 LCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK-GVTLKARDI 250
           RVN + P  V T +L                 E   +  E   R L ++  G   +  +I
Sbjct: 178 RVNALCPGPVNTPLLQ----------------ELFAKDPERAARRLVHVPMGRFAEPEEI 221

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A A  +LASD++ +I+    +VDGG +
Sbjct: 222 AAAVAFLASDDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  157 bits (399), Expect = 6e-47
 Identities = 94/265 (35%), Positives = 136/265 (51%), Gaps = 14/265 (5%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           GK A+VTG A GIG A  R     GA VV+ D  +    A A     +   V YL  DV+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVRGAAL 133
            E +I ++I    ++ G LDIL NNAG+     +H + I +F   ++D II + +  A  
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGI-----QHVAPIEEFPPEDWDRIIAVMLTSAFH 115

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
            ++ A   M  +  G II+ AS   L+      AY  +KH ++GLTK  A E+ ++GI V
Sbjct: 116 TIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITV 175

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDS-GKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           N I P  V T  LV   K   D   + G P   EE+ + E++          +   ++AE
Sbjct: 176 NAICPGYVRTP-LVE--KQIADQAKTRGIP---EEQVIREVMLKGQ-PTKRFVTVDEVAE 228

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
            ALYLASD +  I+G  +V+DGG+T
Sbjct: 229 TALYLASDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  156 bits (396), Expect = 1e-46
 Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 23/268 (8%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL 69
              L+ K+AIVTGG++GIG+A V    + G+ V+  DI + +              V Y 
Sbjct: 1   DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND-----------VDYF 49

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DVS ++ +   I+  ISK+GR+DIL NNAG+      + +I   + +E+D II +NV 
Sbjct: 50  KVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI----ESYGAIHAVEEDEWDRIINVNVN 105

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G  L  KY    M+ +  G II+ ASV S        AY  SKHA++GLT++ A +    
Sbjct: 106 GIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT 165

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            IR   + P  + T +L  A +     ++ GK  E  E K+ E   G  +      K  +
Sbjct: 166 -IRCVAVCPGSIRTPLLEWAAE-----LEVGKDPEHVERKIREW--GEMHPMKRVGKPEE 217

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +A    +LASD + +I+G  + VDGG  
Sbjct: 218 VAYVVAFLASDLASFITGECVTVDGGLR 245

Length = 258

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  155 bits (395), Expect = 2e-46
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 22/267 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLH 70
           L GK+A+VTG A+GIG A  R F + GA V +AD+D A     A ++        V  + 
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+    +   +       G LD+L NNAG+         +   D  ++     +++ G
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI---NVFADPLAMTDE-DWRRCFAVDLDG 120

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA--YTVSKHAIVGLTKNTACELGK 188
           A  G +     MV R  G I++ AS  +    + P    Y V+KH ++GLT+    E   
Sbjct: 121 AWNGCRAVLPGMVERGRGSIVNIASTHAFK--IIPGCFPYPVAKHGLLGLTRALGIEYAA 178

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
             +RVN I+P  + T +  + W +  D      P     E +      L  +K +  +  
Sbjct: 179 RNVRVNAIAPGYIETQLTEDWWNAQPD------PAAARAETLA-----LQPMKRIG-RPE 226

Query: 249 DIAEAALYLASDESKYISGHNLVVDGG 275
           ++A  A++LASDE+ +I+   + +DGG
Sbjct: 227 EVAMTAVFLASDEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  155 bits (394), Expect = 3e-46
 Identities = 83/270 (30%), Positives = 126/270 (46%), Gaps = 25/270 (9%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLH 70
           +L+GK+AIVTGG+RGIG A  R   + GA V I           A+ L     +      
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDVS ++ ++          G++DIL  NAG+    + HK   D+   +++ +I +N+ G
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGI----TVHKPALDYTYEQWNKVIDVNLNG 120

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGK 188
                + AAK+   +  G +I TAS++  +        AY  SK A++ L K+ A E  K
Sbjct: 121 VFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAK 180

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
           Y IRVN ISP  + T +     K      +S  P +                        
Sbjct: 181 YFIRVNSISPGYIDTDLTDFVDKELRKKWESYIPLKRIAL------------------PE 222

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFTT 278
           ++  A LYLASD S Y +G +L++DGG+T 
Sbjct: 223 ELVGAYLYLASDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  154 bits (390), Expect = 1e-45
 Identities = 85/269 (31%), Positives = 128/269 (47%), Gaps = 26/269 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI---ADIDDAAGIALADSLLSSSPLVTYL 69
           L+GK+A+VTG + GIG+A        GA VV+   +  D A    + + + +       +
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAE--EVVEEIKAVGGKAIAV 58

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DVS E+D+  L    I + G LDIL NNAG+ G+ S H    +    +++ +I +N+ 
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSH----EMTLEDWNKVIDVNLT 114

Query: 130 GAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           G  L  + A K     +  G II+ +SV   +   G   Y  SK  +  +TK  A E   
Sbjct: 115 GQFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAP 174

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            GIRVN I+P  + T +   AW              E+   +  L+       G   +  
Sbjct: 175 KGIRVNAIAPGAINTPINAEAWDD-----------PEQRADLLSLIP-----MGRIGEPE 218

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           +IA AA +LASDE+ Y++G  L VDGG T
Sbjct: 219 EIAAAAAWLASDEASYVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  151 bits (384), Expect = 7e-45
 Identities = 86/265 (32%), Positives = 135/265 (50%), Gaps = 26/265 (9%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
           +GK+A++T  A+GIG A    F + GA V+  DI++          L   P +T    DV
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEK-----LKELERGPGITTRVLDV 55

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           + ++ +  L      + GR+D+LFN AG +     H SI D + +++D  + +NVR   L
Sbjct: 56  TDKEQVAALAK----EEGRIDVLFNCAGFV----HHGSILDCEDDDWDFAMNLNVRSMYL 107

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSKHAIVGLTKNTACELGKYGIR 192
            +K     M+ R+ G II+ +SVAS + G+     Y+ +K A++GLTK+ A +  + GIR
Sbjct: 108 MIKAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIR 167

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N I P  V T  L       E       P    EE ++          G      ++A 
Sbjct: 168 CNAICPGTVDTPSLE------ERIQAQPDP----EEALKAFAA--RQPLGRLATPEEVAA 215

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
            A+YLASDES Y++G  +V+DGG++
Sbjct: 216 LAVYLASDESAYVTGTAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 8e-45
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 20/269 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+AI+TG + GIG A  +LF + GAKVV+     A    L   + +       L  D
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V  E   + L+ + + + G LDI FNNAG LG       + +     +   +  N+  A 
Sbjct: 64  VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM---GPVAEMSLEGWRETLATNLTSAF 120

Query: 133 LGMKYAAKVMVPRRSGCIISTAS-VASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           LG K+    M+ R  G +I T++ V    G  G  AY  SK  ++GLT+  A E G  GI
Sbjct: 121 LGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGI 180

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN + P G  T M              G+   +  E +   V GL  LK +  +  +IA
Sbjct: 181 RVNALLPGGTDTPM--------------GRAMGDTPEAL-AFVAGLHALKRMA-QPEEIA 224

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTSK 280
           +AAL+LASD + +++G  L+VDGG + ++
Sbjct: 225 QAALFLASDAASFVTGTALLVDGGVSITR 253

Length = 254

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 8e-45
 Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 27/270 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+A++TG A GIGEA    ++  GA+VVIADI  A     A  +    P    +  D
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +  I  ++   + + G +DILFNNA +         I D   + +D +  +NV+G  
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMA----PILDISRDSYDRLFAVNVKGLF 116

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             M+  A+ MV + R G II+ AS A   G      Y  +K A++  T++ A  L ++GI
Sbjct: 117 FLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGI 176

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDS------GKPCEEEEEKMEELVRGLANLKGVTL 245
            VN I+P  V T M    W    D +D+       +P  E+    + LV G A   G   
Sbjct: 177 NVNAIAPGVVDTPM----W----DQVDALFARYENRPPGEK----KRLV-GEAVPLGRMG 223

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
              D+   AL+LAS ++ YI      VDGG
Sbjct: 224 VPDDLTGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  151 bits (384), Expect = 1e-44
 Identities = 91/262 (34%), Positives = 138/262 (52%), Gaps = 18/262 (6%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT-YLHCDV 73
            K+ IVTGG+RGIG   VR FV++GAKVV     +AAG AL   L  + P    ++ CDV
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDV 68

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           + E+DI+ LI+VT+ + GR+D L NNAG       H++  +  A EF +++ +N+    L
Sbjct: 69  TKEEDIKTLISVTVERFGRIDCLVNNAGW---HPPHQTTDETSAQEFRDLLNLNLISYFL 125

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
             KYA   +   + G II+ +S+   +G      Y  +K AI  +TK  A +  +YG+RV
Sbjct: 126 ASKYALPHLRKSQ-GNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRV 184

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           NCISP  + T +         D + + K  E             A L G      +   A
Sbjct: 185 NCISPGNIWTPLWEELAAQTPDTLATIKEGEL------------AQLLGRMGTEAESGLA 232

Query: 254 ALYLASDESKYISGHNLVVDGG 275
           AL+LA+ E+ + +G +L++ GG
Sbjct: 233 ALFLAA-EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  150 bits (381), Expect = 3e-44
 Identities = 92/275 (33%), Positives = 132/275 (48%), Gaps = 37/275 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-----ADIDDAAGIALADSLLSSSPLVT 67
           L GK A+VTGG+RG+G        + GA+VV+      ++++AA       L +      
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA-----HLEALGIDAL 64

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
           ++  DV+ E DI+ L   T+ + G +DIL NNAG     +      D     +D ++ +N
Sbjct: 65  WIAADVADEADIERLAEETLERFGHVDILVNNAGA----TWGAPAEDHPVEAWDKVMNLN 120

Query: 128 VRGAALGMKYAAKV-MVPRRSGCIISTASVASLMGG----LGPHAYTVSKHAIVGLTKNT 182
           VRG  L  +  AK  M+PR  G II+ ASVA L G     +   AY  SK A++  T+  
Sbjct: 121 VRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRAL 180

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
           A E G +GIRVN I+P    T M     +   + + +  P              L  L  
Sbjct: 181 AAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTP--------------LGRLGD 226

Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                 D+  AAL LASD SK+I+G  L VDGG +
Sbjct: 227 DE----DLKGAALLLASDASKHITGQILAVDGGVS 257

Length = 259

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  149 bits (378), Expect = 1e-43
 Identities = 84/265 (31%), Positives = 141/265 (53%), Gaps = 15/265 (5%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K LE K+A++TG + GIG+A+     + GA V+  DI +A      D + S+       H
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSET-VDKIKSNGGKAKAYH 60

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S EQ +++  +    + GR+D+LFNNAGV     +   I ++  + FD I+ +++RG
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGR---IHEYPVDVFDKIMAVDMRG 117

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             L  K    +M+  + G II+T+S +     L    Y  +K A++  TK+ A E G+ G
Sbjct: 118 TFLMTKMLLPLMM-EQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDG 176

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IR N I+P  + T ++     + ED  ++GK   E ++ M  L        G   K  ++
Sbjct: 177 IRANAIAPGTIETPLVDKLTGTSED--EAGKTFRENQKWMTPL--------GRLGKPEEV 226

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A+  ++LASD+S +I+G  + +DGG
Sbjct: 227 AKLVVFLASDDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  155 bits (392), Expect = 1e-43
 Identities = 90/265 (33%), Positives = 129/265 (48%), Gaps = 21/265 (7%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
           + ++ +VTG A GIG A  + F + G +VV+AD +       ADSL            DV
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--GPDHHAL-AMDV 60

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           S E  I+        + GR+D+L NNAGV        +  D    EF  +  IN+ GA L
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMT--ATLDTTLEEFARLQAINLTGAYL 118

Query: 134 GMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             + A ++M+       I++ AS A L+      AY+ SK A++ LT++ ACE    GIR
Sbjct: 119 VAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIR 178

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN + P  V T M+        +   +GK            VR    L G   +  +IAE
Sbjct: 179 VNAVLPGYVRTQMV-------AELERAGK-------LDPSAVRSRIPL-GRLGRPEEIAE 223

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           A  +LASD++ YI+G  LVVDGG+T
Sbjct: 224 AVFFLASDQASYITGSTLVVDGGWT 248

Length = 520

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  146 bits (370), Expect = 1e-42
 Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 24/268 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-----ADIDDAAGIALADSLLSSSPLVT 67
           L GK+AI+TG + GIG  T  LF + GA++ +       +++     L   +     L+ 
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILL- 59

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            +  D++ E+    +I+ T++K GRLDIL NNAG+L          D D  E+D ++ +N
Sbjct: 60  -VVADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGG----GEDQDIEEYDKVMNLN 114

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           +R A + +   A   + +  G I++ +SVA      G   Y +SK A+   T+ TA EL 
Sbjct: 115 LR-AVIYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELA 173

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             G+RVN +SP  + T                G P EE+  K     +    L G     
Sbjct: 174 PKGVRVNSVSPGVIVTGFHRRM----------GMP-EEQYIKFLSRAKETHPL-GRPGTV 221

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGG 275
            ++AEA  +LASD S +I+G  L VDGG
Sbjct: 222 DEVAEAIAFLASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 2e-42
 Identities = 87/282 (30%), Positives = 131/282 (46%), Gaps = 41/282 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GKI IVTGG+ GIG A V+  + +GA VV ADI    G               ++  D
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG---------QHENYQFVPTD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV-----LGNQSKHKSITDFDANEFDNIIRIN 127
           VS  +++ + +   I K GR+D L NNAG+     L ++       + +   FD +  IN
Sbjct: 58  VSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNIN 117

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            +G  L  +  A+ MV +  G I++ +S A L G  G   Y  +K A+   T++ A ELG
Sbjct: 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG 177

Query: 188 KYGIRVNCISPFGV--ATSMLVNAWKSCEDCMDSGKPCEEEE------EKMEELVRGLAN 239
           K+ IRV  ++P G+  AT +                P  EE         +E+L  G   
Sbjct: 178 KHNIRVVGVAP-GILEATGL--------------RTPEYEEALAYTRGITVEQLRAGYTK 222

Query: 240 LKGVTL----KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              + L    K  ++A+   YL SD + YI+G    + GG T
Sbjct: 223 TSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  144 bits (366), Expect = 4e-42
 Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 35/270 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI--ADIDDAAGIALADSLLSSSPLVTYLH 70
            +GK+A++TGG RGIG A    F++ GAKV +     ++ A        L    + T   
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA------KELREKGVFTI-K 57

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV     ++    V   + GR+D+L NNAG++          +FD  +++ +I+IN+ G
Sbjct: 58  CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMP----FEEFDEEKYNKMIKINLNG 113

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-----YTVSKHAIVGLTKNTACE 185
           A         ++   ++G I++ AS A    G+G  A     Y ++K  I+ LT+  A E
Sbjct: 114 AIYTTYEFLPLLKLSKNGAIVNIASNA----GIGTAAEGTTFYAITKAGIIILTRRLAFE 169

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           LGKYGIRVN ++P  V T M +           SGK  +EE EK+ EL R    LK  T 
Sbjct: 170 LGKYGIRVNAVAPGWVETDMTL-----------SGK-SQEEAEKLRELFRNKTVLK-TTG 216

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
           K  DIA   L+LASD+++YI+G  +V DGG
Sbjct: 217 KPEDIANIVLFLASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  144 bits (366), Expect = 5e-42
 Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 14/266 (5%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPL-VTYLHCD 72
           GK+A+VTG   GIG    R     GA +V+    DAA I A+   L +   + V Y   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH-KSITDFDANEFDNIIRINVRGA 131
           +S    I++++     + G +DIL NNAG+     +H   I DF   ++D II +N+   
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGI-----QHVAPIEDFPTEKWDAIIALNLSAV 116

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + A   M  +  G II+ ASV  L+      AY  +KH +VGLTK  A E    G+
Sbjct: 117 FHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGV 176

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
             N I P  V T  LV   K             +E+   E L+    + + VT +   + 
Sbjct: 177 TCNAICPGWVLTP-LVE--KQISALAQK-NGVPQEQAARELLLEKQPSKQFVTPE--QLG 230

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
           + A++LASD +  I+G  + VDGG+T
Sbjct: 231 DTAVFLASDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  144 bits (364), Expect = 8e-42
 Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 27/279 (9%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA--AGIALADS 58
           M L+     + +L+GK+AIVTGG  G+G+       K GA ++I            L + 
Sbjct: 1   MELDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEK 60

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                  VT++  D++  +  + ++   + + G++DIL NNAG +    +   + ++   
Sbjct: 61  EGRK---VTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTI----RRAPLLEYKDE 113

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           +++ ++ IN+       +  AKVM  + SG II+ AS+ S  GG    AYT SKH + GL
Sbjct: 114 DWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGL 173

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE-LVRGL 237
           TK  A EL  Y I+VN I+P  + T+              +  P   ++ + +E L R  
Sbjct: 174 TKAFANELAAYNIQVNAIAPGYIKTA--------------NTAPIRADKNRNDEILKRIP 219

Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
           A   G   +  D+  AA++LAS  S Y++GH L VDGG+
Sbjct: 220 AGRWG---EPDDLMGAAVFLASRASDYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  142 bits (361), Expect = 2e-41
 Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 17/265 (6%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDV 73
            K+AI+TG A+GIG A        G  +V+AD++           +S        +  DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           + + D++ LI+  + K G  D++ NNAG+         +      +   +  +NV G   
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITP----LLTITEEDLKKVYAVNVFGVLF 117

Query: 134 GMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           G++ AA+        G II+ +S+A + G     AY+ SK A+ GLT+  A EL   GI 
Sbjct: 118 GIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGIT 177

Query: 193 VNCISPFGVATSMLVNAWKSCEDCM--DSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           VN  +P  V T M    W   ++ +   +GKP   E E   E    +    G   +  D+
Sbjct: 178 VNAYAPGIVKTEM----WDYIDEEVGEIAGKP---EGEGFAEFSSSIP--LGRLSEPEDV 228

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A    +LAS++S YI+G  ++VDGG
Sbjct: 229 AGLVSFLASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  142 bits (360), Expect = 4e-41
 Identities = 93/279 (33%), Positives = 132/279 (47%), Gaps = 32/279 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI----DDAAGIALA--DSLLSSSPLV 66
           LEGK+A +TG ARG G A        GA ++  D+     D     LA  + L  ++ LV
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 67  TYL-------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
             L         DV    +++ ++   + + GRLD++  NAGVL          +    +
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSW----ELSEEQ 116

Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           +D ++ IN+ G     K     M+ R +G  II T+SVA L    G   Y  +KH +VGL
Sbjct: 117 WDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGL 176

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           TK  A EL +YGIRVN I P+ V T M+       E   ++         K  E  R   
Sbjct: 177 TKTLANELAEYGIRVNSIHPYSVDTPMIAP-----EAMREAFL-------KYPEAARAFM 224

Query: 239 N--LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                   +   D+A+A L+LASDES+YI+GH L VD G
Sbjct: 225 PALPVSGFVPPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  141 bits (358), Expect = 7e-41
 Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 31/270 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA----DIDDAAGIALADSLLSSSPLVTY 68
           L+GK+A +TGG  GIG+A  + F + GA V IA    ++ +AA   ++ +          
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR---AHP 57

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGN-QSKHKSITDFDANEFDNIIRIN 127
           + CDV   + ++  ++ T+ + G++DIL NNA   GN  +  +S++    N F  +I I+
Sbjct: 58  IQCDVRDPEAVEAAVDETLKEFGKIDILINNAA--GNFLAPAESLS---PNGFKTVIDID 112

Query: 128 VRGAALGMKYAAK-VMVPRRSGCIIS-TASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           + G     K   K ++  +  G I++ +A+ A        H+   +K  +  LT++ A E
Sbjct: 113 LNGTFNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHS-AAAKAGVDALTRSLAVE 171

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
            G YGIRVN I+P  + T           + M+   P  + E+KM E V       G   
Sbjct: 172 WGPYGIRVNAIAPGPIPT----------TEGMERLAPSGKSEKKMIERVP--LGRLGTP- 218

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
              +IA  AL+L SD + YI+G  LVVDGG
Sbjct: 219 --EEIANLALFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  141 bits (358), Expect = 8e-41
 Identities = 94/272 (34%), Positives = 133/272 (48%), Gaps = 28/272 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK A++TG  +GIGE   R+F +HGA +++ DI       LAD L       T +  D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVAD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEFDNIIRINVRG 130
           V     +   I     K GR+DIL NNAGV  LG+        D    + D  I IN++G
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGS------FLDMSDEDRDFHIDINIKG 116

Query: 131 AALGMKYAAKVMVPRRSGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                K     M+ R+ G I+  +SV   ++   G  AY ++K AIVGLTK+ A E  + 
Sbjct: 117 VWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQS 176

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK--- 246
           GIRVN I P  V T M  +  +            +   E  E ++  +A  K + L+   
Sbjct: 177 GIRVNAICPGYVRTPMAESIAR------------QSNPEDPESVLTEMA--KAIPLRRLA 222

Query: 247 -ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              ++ E A +LASDES Y++G   V+DGG T
Sbjct: 223 DPLEVGELAAFLASDESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  140 bits (356), Expect = 9e-41
 Identities = 82/271 (30%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHC 71
           L GK+A+VTG +RGIG A  +   + GA VV+      A    +   + ++      +  
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS    +  L +      G +DIL NNAGV+      K I +    EFD +  +N +GA
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGVM----LKKPIAETSEEEFDRMFTVNTKGA 116

Query: 132 ALGMKYAAKVMVPRRSGCIISTAS--VASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              ++ AAK +  R  G II+ +S   A+     G  AY  SK A+   T+  A ELG  
Sbjct: 117 FFVLQEAAKRL--RDGGRIINISSSLTAAYTPNYG--AYAGSKAAVEAFTRVLAKELGGR 172

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN---LKGVTLK 246
           GI VN ++P  V T M                       K EE V G A    L  +  +
Sbjct: 173 GITVNAVAPGPVDTDMF-------------------YAGKTEEAVEGYAKMSPLGRLG-E 212

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             DIA    +LAS + ++++G  +  +GG+ 
Sbjct: 213 PEDIAPVVAFLASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  140 bits (356), Expect = 1e-40
 Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 33/271 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             GK   VTG A+GIG A    FV+ GAKV+        G   A       P  T+   D
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVI--------GFDQAFLTQEDYPFATF-VLD 56

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS    +  +    +++ G LD+L N AG+L    +  +       ++     +N  GA 
Sbjct: 57  VSDAAAVAQVCQRLLAETGPLDVLVNAAGIL----RMGATDSLSDEDWQQTFAVNAGGAF 112

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +        +RSG I++  S A+ +  +G  AY  SK A+  L K    EL  YG+R
Sbjct: 113 NLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVR 172

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-LANLK-GVTLK--AR 248
            N +SP    T M    W                E+  ++++ G     K G+ L   AR
Sbjct: 173 CNVVSPGSTDTDMQRTLWVD--------------EDGEQQVIAGFPEQFKLGIPLGKIAR 218

Query: 249 --DIAEAALYLASDESKYISGHNLVVDGGFT 277
             +IA A L+LASD + +I+  ++VVDGG T
Sbjct: 219 PQEIANAVLFLASDLASHITLQDIVVDGGAT 249

Length = 252

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  140 bits (355), Expect = 1e-40
 Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 34/266 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              K  ++TG A GIG A  R F+  GA+V   D  D     L+ +         +L  D
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--LSGNF-------HFLQLD 53

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S   D++ L +        +DIL N AG+L +   +K + D    E+ +I   N+    
Sbjct: 54  LS--DDLEPLFDWV----PSVDILCNTAGILDD---YKPLLDTSLEEWQHIFDTNLTSTF 104

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  +     M+ R+SG II+  S+AS + G G  AYT SKHA+ G TK  A +  K GI+
Sbjct: 105 LLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQ 164

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           V  I+P  V T M   A              + E   + + V     +K    +  ++AE
Sbjct: 165 VFGIAPGAVKTPM--TA-------------ADFEPGGLADWVARETPIKRWA-EPEEVAE 208

Query: 253 AALYLASDESKYISGHNLVVDGGFTT 278
             L+LAS ++ Y+ G  + +DGG+T 
Sbjct: 209 LTLFLASGKADYMQGTIVPIDGGWTL 234

Length = 235

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  140 bits (355), Expect = 1e-40
 Identities = 79/257 (30%), Positives = 113/257 (43%), Gaps = 38/257 (14%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+AI+TGGA GIG AT +L +K GAKV I D ++  G A     ++     T++ CDV+ 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN----VRGA 131
            + +       I K GR+DIL NNAG+L  +S   +       E    I +N    +   
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWE--KTIDVNLTGVINTT 118

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH----AYTVSKHAIVGLTKNTACEL- 186
            L + Y  K     + G I++  SVA    GL P      Y+ SKH +VG T++ A  L 
Sbjct: 119 YLALHYMDKNK-GGKGGVIVNIGSVA----GLYPAPQFPVYSASKHGVVGFTRSLADLLE 173

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
            K G+RVN I P    T +L                   +    E            T  
Sbjct: 174 YKTGVRVNAICPGFTNTPLL------------------PDLVAKEA----EMLPSAPTQS 211

Query: 247 ARDIAEAALYLASDESK 263
              +A+A +YL  D+ K
Sbjct: 212 PEVVAKAIVYLIEDDEK 228

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  140 bits (356), Expect = 2e-40
 Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 23/267 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
             L GK+AIVTGGA  IG A  R  V  GA+V I DID   G A+A SL        ++ 
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGER---ARFIA 58

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D++ +  I+  +   +++ GR+DIL N A    +     S  D+ A      + +N+  
Sbjct: 59  TDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAA-----LDVNLVS 113

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           AA+  + A   +  R  G I++  S+++     G   Y  SK AI  LT++ A +L   G
Sbjct: 114 AAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDG 172

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN +SP           W    D +  G     +  K + +      L  V     ++
Sbjct: 173 IRVNSVSPGWT--------WSRVMDELSGG-----DRAKADRVAAPFHLLGRVG-DPEEV 218

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A+   +L SD + +++G +  VDGG++
Sbjct: 219 AQVVAFLCSDAASFVTGADYAVDGGYS 245

Length = 261

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  140 bits (354), Expect = 3e-40
 Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 22/263 (8%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSL--LSSSPLVTYLHCDVS 74
           A +TG A G+G A  R   + GAKV + DI+DAAG+ A A  +       +      DV+
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E   Q L+       G L +L NNAGV        +I   + +E+  ++ INV    LG
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSF----GAIEQIELDEWRRVMAINVESIFLG 117

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA--CELGKYGIR 192
            K+A   +   +   I++ +SVA+        AY  SK A+  LTK+ A  C      +R
Sbjct: 118 CKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR 177

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N I P  + T ++   ++              EEE   +L RG+    G   +  D+A 
Sbjct: 178 CNSIHPTFIRTGIVDPIFQRL-----------GEEEATRKLARGVP--LGRLGEPDDVAH 224

Query: 253 AALYLASDESKYISGHNLVVDGG 275
           A LYLASDES++++G  LV+DGG
Sbjct: 225 AVLYLASDESRFVTGAELVIDGG 247

Length = 251

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  139 bits (353), Expect = 7e-40
 Identities = 70/195 (35%), Positives = 94/195 (48%), Gaps = 12/195 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+  +TGGARGIG AT R     GA+V I D+D+A     A  L     LV     D
Sbjct: 3   LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL----GLVVGGPLD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEFDNIIRINVRG 130
           V+        ++   +  G +D+L NNAGV  +G         D        I+ +NV G
Sbjct: 59  VTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVG------PFLDEPDAVTRRILDVNVYG 112

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             LG K AA  MVPR  G +++ AS+A  +   G   Y  SKHA+VG T     EL   G
Sbjct: 113 VILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTG 172

Query: 191 IRVNCISPFGVATSM 205
           + V+ + P  V T +
Sbjct: 173 VHVSVVLPSFVNTEL 187

Length = 273

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  137 bits (346), Expect = 4e-39
 Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 16/263 (6%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+A+VTGGA+GIG+       K G  V +AD+++      A  +  +         DVS 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           +  + + I+    K G  D++ NNAGV    +    I +    E   +  +NV+G   G+
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGV----APITPILEITEEELKKVYNVNVKGVLFGI 116

Query: 136 KYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           + AA+    +   G II+ AS+A   G     AY+ +K A+ GLT+  A EL   GI VN
Sbjct: 117 QAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVN 176

Query: 195 CISPFGVATSMLVNAWKSCEDCMD--SGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
              P  V T M    W+  ++     +GKP     E  EE    +A   G   +  D+A 
Sbjct: 177 AYCPGIVKTPM----WEEIDEETSEIAGKP---IGEGFEEFSSEIA--LGRPSEPEDVAG 227

Query: 253 AALYLASDESKYISGHNLVVDGG 275
              +LAS++S YI+G +++VDGG
Sbjct: 228 LVSFLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  135 bits (343), Expect = 9e-39
 Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 23/263 (8%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVI--ADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           A+VTGG+RGIG+A      + GA VVI      DAA   +A  +         +  DVS 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAA-AEVAAEIEELGGKAVVVRADVSQ 59

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
            QD++ +      + GRLD+L +NA         + +++     +D  +  N++      
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNA----AAGAFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           + AAK+M  R  G I++ +S+ S+       A   +K A+  L +  A ELG  GIRVN 
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL 255
           +SP  + T  L   + + ED +      E                 G     +D+A+A  
Sbjct: 176 VSPGVIDTDAL-AHFPNREDLL------EAAAANT---------PAGRVGTPQDVADAVG 219

Query: 256 YLASDESKYISGHNLVVDGGFTT 278
           +L SD ++ I+G  LVVDGG + 
Sbjct: 220 FLCSDAARMITGQTLVVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  143 bits (363), Expect = 1e-38
 Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 32/277 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K L GK+A+VTG A GIG+AT +     GA VV+AD+D+ A  A A  L      +  + 
Sbjct: 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALG-VA 476

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ E  +Q          G +DI+ +NAG+    +    I +    ++     +N  G
Sbjct: 477 CDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI----AISGPIEETSDEDWRRSFDVNATG 532

Query: 131 AALGMKYAAKVMVPRRS---GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
             L  + A ++M  +     G I+  AS  ++  G    AY  +K A + L +  A ELG
Sbjct: 533 HFLVAREAVRIM--KAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG 590

Query: 188 KYGIRVNCISPFGV--ATSMLVNAWKSCEDCMDSGKPCEE-------EEEKMEELVRGLA 238
             GIRVN ++P  V   + +    W             E         EE++EE  R   
Sbjct: 591 PDGIRVNGVNPDAVVRGSGIWTGEWI------------EARAAAYGLSEEELEEFYRA-R 637

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           NL    +   D+AEA ++LAS      +G  + VDGG
Sbjct: 638 NLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  135 bits (341), Expect = 2e-38
 Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 26/267 (9%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLE 76
            +VTG A+GIG A  R   + GA+V   D +    + L   L     P  TY   DV+  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYK-LDVADS 59

Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
             +  ++     ++G +D+L N AG+L    +  +I      ++     +N  G     +
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGIL----RLGAIDSLSDEDWQATFAVNTFGVFNVSQ 115

Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
             +  M  RRSG I++  S A+ +  +G  AY  SK A+  LTK    EL  YGIR N +
Sbjct: 116 AVSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVV 175

Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-LANLK-GVTLK--AR--DI 250
           SP    T M    W       + G+         ++++ G     + G+ L   A   DI
Sbjct: 176 SPGSTDTEMQRQLWND-----EYGE---------QQVIAGSPEQFRLGIPLGKIAEPSDI 221

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A A L+LASD + +I+ H+LVVDGG T
Sbjct: 222 ANAVLFLASDLASHITMHDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  134 bits (339), Expect = 3e-38
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 26/263 (9%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           GK+AIVTGG  GIG+     F++ G KVV ADID+  G   A++     P + ++H DV+
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAE---GPNLFFVHGDVA 57

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E  ++ ++   + K GR+D+L NNA           ++     E+D I+ +N+ G    
Sbjct: 58  DETLVKFVVYAMLEKLGRIDVLVNNAARGSK----GILSSLLLEEWDRILSVNLTGPYEL 113

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            +Y    ++ +  G II+ AS  +        AY  SK  +V LT   A  LG   IRVN
Sbjct: 114 SRYCRDELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVN 171

Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
           CISP  + T+         E    +  P  +E+           +  G     +DIA   
Sbjct: 172 CISPGWINTT---------EQQEFTAAPLTQEDHA--------QHPAGRVGTPKDIANLV 214

Query: 255 LYLASDESKYISGHNLVVDGGFT 277
           L+L   ++ +I+G   +VDGG T
Sbjct: 215 LFLCQQDAGFITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  133 bits (337), Expect = 8e-38
 Identities = 83/250 (33%), Positives = 124/250 (49%), Gaps = 25/250 (10%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
            TL+GK+A++TG + GIGEAT R   + GAKVV+A   +    ALAD +   +     L 
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI--GAGAALALA 59

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANEFDNIIRINVR 129
            DV+    ++  I     + GR+DIL NNAG+ LG+      + + D +++D +I  NV+
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGD-----PLDEADLDDWDRMIDTNVK 114

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G   G +     MV R+SG II+  S+A      G   Y  +K A+   +     EL   
Sbjct: 115 GLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGT 174

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           GIRV  ISP  V T+              S    E ++E+ +++ +G     G  L   D
Sbjct: 175 GIRVTVISPGLVETTEF------------STVRFEGDDERADKVYKG-----GTALTPED 217

Query: 250 IAEAALYLAS 259
           IAEA L+ A+
Sbjct: 218 IAEAVLFAAT 227

Length = 246

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 1e-37
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 35/274 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD--IDDAAGIALADSLLSSSPLVTYLH 70
           L GKIA+VTG +RGIGEA  +L  + GA V+++   +D     A+AD+++++      L 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQ--AVADAIVAAGGKAEALA 63

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGV---LGNQSKHKSITDFDANEFDNIIRIN 127
           C +   + I  L      +HGRLDIL NNA      G+      I D D   F   + +N
Sbjct: 64  CHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGH------ILDTDLGAFQKTVDVN 117

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           +RG       A K+M  +  G I++ ASV  +  G     Y+++K A++ +TK  A E  
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177

Query: 188 KYGIRVNCISPFGVAT---SMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
            +GIRVN + P    T   S L                   + + + +       L+   
Sbjct: 178 PFGIRVNALLPGLTDTKFASALF------------------KNDAILKQALAHIPLRRHA 219

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
            +  ++A A LYLASD S Y +G  L VDGG+ +
Sbjct: 220 -EPSEMAGAVLYLASDASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  132 bits (335), Expect = 1e-37
 Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 14/202 (6%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
           +G +A+VTGGA G+G ATV   +  GAKVVI D+ ++ G  +A           ++  DV
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVA----KLGDNCRFVPVDV 56

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSK---HKSITDFDANEFDNIIRINVRG 130
           + E+D++  + +  +K GRLDI+ N AG+    +K    K         F  +I +N+ G
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAGI-AVAAKTYNKKGQQPHSLELFQRVINVNLIG 115

Query: 131 AALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
               ++ AA  M           G II+TASVA+  G +G  AY+ SK  IVG+T   A 
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIAR 175

Query: 185 ELGKYGIRVNCISPFGVATSML 206
           +L   GIRV  I+P    T +L
Sbjct: 176 DLAPQGIRVVTIAPGLFDTPLL 197

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  131 bits (330), Expect = 6e-37
 Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 32/263 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+  +TGG  G+G AT       GA+V +     A        + + +  +  +  D
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI--D 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +   Q  +  ++    + GRLD L N AG     +    I D DA+ +D +  +NV+   
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGT----IADGDADTWDRMYGVNVKTTL 118

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K A   +     G I++  + A+L  G G  AY  +K  +  LT+  A EL   GI 
Sbjct: 119 NASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGIT 178

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN + P  + T                  P    +    +  R         +    IA 
Sbjct: 179 VNAVLPSIIDT------------------PPNRADMPDADFSR--------WVTPEQIAA 212

Query: 253 AALYLASDESKYISGHNLVVDGG 275
              +L SDE++ I+G ++ VDGG
Sbjct: 213 VIAFLLSDEAQAITGASIPVDGG 235

Length = 239

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  131 bits (330), Expect = 8e-37
 Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 21/267 (7%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            LEGK A+VTGG +GIG A V      GA+V     +                 V    C
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62

Query: 72  DVSLEQDIQNLIN-VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           DVS   + Q L++ V     G+L+IL NNAG     +  K   D+   ++  I+  N   
Sbjct: 63  DVSSRSERQELMDTVASHFGGKLNILVNNAGT----NIRKEAKDYTEEDYSLIMSTNFEA 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A    + A  ++    +G I+  +SVA ++       Y  +K A+  LT++ ACE  K  
Sbjct: 119 AYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDN 178

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN ++P+ +AT  LV                +++E   + + R    LK    +  ++
Sbjct: 179 IRVNAVAPWVIATP-LVEP------------VIQQKENLDKVIER--TPLKRFG-EPEEV 222

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A    +L    + YI+G  + VDGG T
Sbjct: 223 AALVAFLCMPAASYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 1e-36
 Identities = 84/270 (31%), Positives = 124/270 (45%), Gaps = 42/270 (15%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           GK  +VTG + GIG A      + GA+VV A  + AA   LA              C+  
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET----------GCEP- 57

Query: 75  LEQDIQN--LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           L  D+ +   I   ++  G  D L N AG+    +  +S  D  A  FD ++ +N RGAA
Sbjct: 58  LRLDVGDDAAIRAALAAAGAFDGLVNCAGI----ASLESALDMTAEGFDRVMAVNARGAA 113

Query: 133 LGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  ++ A+ M+   R G I++ +S A+L+G     AY  SK A+  +T+    ELG +GI
Sbjct: 114 LVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGI 173

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
           RVN ++P    T M   AW               + +K          L  + L      
Sbjct: 174 RVNSVNPTVTLTPMAAEAW--------------SDPQKSG------PMLAAIPLGRFAEV 213

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            D+A   L+L SD +  +SG +L VDGG+T
Sbjct: 214 DDVAAPILFLLSDAASMVSGVSLPVDGGYT 243

Length = 245

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 2e-36
 Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 29/269 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL----VTY 68
           L+ +  ++TGG+ G+G A        GA V++ DI    G A AD++ +           
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           L  DV      +  ++  + + GRLDIL NNAG+    +   +  +    E+D++I +N+
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGI----ATDAAFAELSIEEWDDVIDVNL 119

Query: 129 RGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            G     + A   M+  RR G I++ ASVA + G  G   Y  SK  ++GLTK  A EL 
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA 179

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             GI VN ++P  + T M  NA                      E +     ++ +  + 
Sbjct: 180 PRGITVNAVAPGAINTPMADNA-------------------APTEHLLNPVPVQRLG-EP 219

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
            ++A    +L SD + Y++G  + VDGGF
Sbjct: 220 DEVAALVAFLVSDAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  129 bits (326), Expect = 3e-36
 Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 42/277 (15%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHC 71
           E KI ++TG A  IG+A  +  +  GA++++ADI+  A   L + L +   + ++  L  
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVI-ALEL 59

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D++ ++ I+ LI   + K GR+DIL NNA     +       +F   +++ ++ +N+ GA
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYP-SPKVWGSRFEEFPYEQWNEVLNVNLGGA 118

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-------------AYTVSKHAIVGL 178
            L  +   K+   +  G II+   +AS+ G + P               Y+V K  I+ L
Sbjct: 119 FLCSQAFIKLFKKQGKGSIIN---IASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHL 175

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           TK  A      GIRVN ISP G+                 + +P     E +E+      
Sbjct: 176 TKYLAKYYADTGIRVNAISPGGIL----------------NNQP----SEFLEKY-TKKC 214

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            LK + L   D+  A ++L SD S Y++G NLV+DGG
Sbjct: 215 PLKRM-LNPEDLRGAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  128 bits (324), Expect = 6e-36
 Identities = 87/263 (33%), Positives = 123/263 (46%), Gaps = 21/263 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK A++TGG  GIG  T R F+  GA+V I    D A +  A + L  S LV  +  D
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGR-DPASLEAARAELGESALV--IRAD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
                  + L        GRLD +F NAGV    +K   + D+D   FD     NV+G  
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGV----AKFAPLEDWDEAMFDRSFNTNVKGPY 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             ++  A + +      I+   S+ + +G      Y  SK A++ L K  + EL   GIR
Sbjct: 117 FLIQ--ALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIR 174

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN +SP  V T +              G P E   + +   ++ L  L G      +IA+
Sbjct: 175 VNAVSPGPVQTPLYGKL----------GLP-EATLDAVAAQIQALVPL-GRFGTPEEIAK 222

Query: 253 AALYLASDESKYISGHNLVVDGG 275
           A LYLASDES +I G  ++VDGG
Sbjct: 223 AVLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 1e-35
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 31/274 (11%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL--HC 71
             ++A+V GG + +G        + G +V +ADI+      +A  + +            
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D + EQ +  L        GR+D+L  NAG+     K   ITDF   +FD  +++N+ G 
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIA----KAAFITDFQLGDFDRSLQVNLVGY 116

Query: 132 ALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
            L  +  +++M+     G II   S +  +G      Y+ +K   VGLT++ A +L +YG
Sbjct: 117 FLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYG 176

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE-----EEKMEELVRGLANLKGVTL 245
           I V+ +        ML N  KS      S  P   +      +++E+       +  V L
Sbjct: 177 ITVHSL--------MLGNLLKS--PMFQSLLPQYAKKLGIKPDEVEQ-----YYIDKVPL 221

Query: 246 KA----RDIAEAALYLASDESKYISGHNLVVDGG 275
           K     +D+    L+ AS ++ Y +G ++ V GG
Sbjct: 222 KRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  127 bits (322), Expect = 1e-35
 Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 31/266 (11%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
            IVTG A+GIG A  R  ++ GA V+  D+           LL     +     DV+   
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLP-------FVLLLEYGDPLRLTPLDVADAA 53

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
            ++ + +  +++HG +D L N AGVL    +  +       +++    +NV G    ++ 
Sbjct: 54  AVREVCSRLLAEHGPIDALVNCAGVL----RPGATDPLSTEDWEQTFAVNVTGVFNLLQA 109

Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
            A  M  RR+G I++ AS A+ +  +   AY  SK A+  L+K    EL  YG+R N +S
Sbjct: 110 VAPHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVS 169

Query: 198 PFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL--KGVTLK--AR--DIA 251
           P    T+M    W               +E+   +++ G+      G+ L   A+  DIA
Sbjct: 170 PGSTDTAMQRTLW--------------HDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIA 215

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
            A L+LASD++ +I+ H+LVVDGG T
Sbjct: 216 NAVLFLASDQAGHITMHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  127 bits (322), Expect = 1e-35
 Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 24/268 (8%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYL 69
            L+G+ A++TG ++GIG A  R F+  GA V+I   D  A     D L    P   V  L
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 70  HCDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             DVS ++D + +++  +  H   L IL NNAG  GN    K+  D+  +E+  I   N+
Sbjct: 66  AADVSDDEDRRAILD-WVEDHWDGLHILVNNAG--GNIR--KAAIDYTEDEWRGIFETNL 120

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
             A    +YA  ++    S  I++  SV+ L        Y ++K A++ +T+N A E  +
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE 180

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            GIRVN ++P+ + T +                    + +  E+++     ++ V  +  
Sbjct: 181 DGIRVNAVAPWYIRTPLT--------------SGPLSDPDYYEQVIE-RTPMRRVG-EPE 224

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGF 276
           ++A A  +L    + YI+G  + VDGGF
Sbjct: 225 EVAAAVAFLCMPAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 2e-35
 Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 29/269 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            + K+AIVTG A GIG+A      + GA VV+ADI+      +A  +++       +  D
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS     + + + T+S  G +D L NNA + G   K   +     + +   + +N+ GA 
Sbjct: 64  VSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGM-KLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +  +   K M  R  G I++ +S A+ +       Y ++K  + GLT+  A ELG   IR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLYS-NF--YGLAKVGLNGLTQQLARELGGMNIR 179

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR---- 248
           VN I+P  + T              ++ +         +E V  +  +KG+ L       
Sbjct: 180 VNAIAPGPIDT--------------EATRTVTP-----KEFVADM--VKGIPLSRMGTPE 218

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           D+    L+L SDE+ +I+G    VDGG  
Sbjct: 219 DLVGMCLFLLSDEASWITGQIFNVDGGQI 247

Length = 250

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 2e-35
 Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 32/270 (11%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLH 70
           TL  K+AIVTG +RGIG A  R     G  V +     AA    L   + ++      + 
Sbjct: 2   TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQ 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+    +  L +   +  GR+D+L NNAGV+       +I DFD  +FD  I  N+RG
Sbjct: 62  ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMP----LGTIADFDLEDFDRTIATNLRG 117

Query: 131 AALGMKYAAKVMVPRRSGCII--STASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           A + ++ AA+ +   + G II  ST+ +A  + G GP  Y  SK A+ GL    A EL  
Sbjct: 118 AFVVLREAARHL--GQGGRIINLSTSVIALPLPGYGP--YAASKAAVEGLVHVLANELRG 173

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            GI VN ++P  VAT +  N                    K  E +  LA L  +     
Sbjct: 174 RGITVNAVAPGPVATELFFNG-------------------KSAEQIDQLAGLAPLERLGT 214

Query: 249 --DIAEAALYLASDESKYISGHNLVVDGGF 276
             +IA A  +LA  +  +++G  L V+GGF
Sbjct: 215 PEEIAAAVAFLAGPDGAWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  126 bits (319), Expect = 4e-35
 Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 14/262 (5%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           GK+A+VTGGA GIG A  +     GA VV+ADI D              P    + CDV+
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADI-DPEIAEKVAEAAQGGPRALGVQCDVT 59

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E  +Q+     + + G LDI+ +NAG+    +    I +    +++  + IN+ G  L 
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVSNAGI----ATSSPIAETSLEDWNRSMDINLTGHFLV 115

Query: 135 MKYAAKVM-VPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
            + A ++M      G I+  AS  ++  G    AY+ +K A   L +  A E G+ GIRV
Sbjct: 116 SREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRV 175

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           N ++P  V     +                 +    +EE  R   NL    +   D+AEA
Sbjct: 176 NTVNPDAVFRGSKIWE-------GVWRAARAKAYGLLEEEYRT-RNLLKREVLPEDVAEA 227

Query: 254 ALYLASDESKYISGHNLVVDGG 275
            + +AS++    +G  + VDGG
Sbjct: 228 VVAMASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  126 bits (318), Expect = 4e-35
 Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 29/269 (10%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVV---IADIDDAAGIALADSLLSSSPLVTY 68
           +LEGK+A+VTG   G+G+       + GA +V    ++  +      A      S     
Sbjct: 2   SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLS----- 56

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           L  D+S  + I+ L++  + + G +DIL NNAG++    +     +F   ++D+++ +N+
Sbjct: 57  LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGII----RRADAEEFSEKDWDDVMNVNL 112

Query: 129 RGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           +      + AAK  + + R G II+ AS+ S  GG+   +YT SKHA+ GLTK  A E  
Sbjct: 113 KSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWA 172

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             GI VN I+P  +AT              ++ +    +E++   ++  +    G     
Sbjct: 173 AKGINVNAIAPGYMAT--------------NNTQALRADEDRNAAILERIP--AGRWGTP 216

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
            DI   A++LAS  S Y++G+ L VDGG+
Sbjct: 217 DDIGGPAVFLASSASDYVNGYTLAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 1e-34
 Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 26/272 (9%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTY 68
           Y  LEGK+ ++TGG+ G+G A    F K  AKVVI    D      +A+ +  +      
Sbjct: 2   YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIA 61

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV++E D+ NLI   + + G LD++ NNAG+   ++   S  +    +++ +I  N+
Sbjct: 62  VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGI---ENAVPS-HEMSLEDWNKVINTNL 117

Query: 129 RGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACE 185
            GA LG + A K  V     G II+ +SV   +    P    Y  SK  +  +T+  A E
Sbjct: 118 TGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP--WPLFVHYAASKGGVKLMTETLAME 175

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
               GIRVN I P  + T   +NA K  +          ++   +E ++       G   
Sbjct: 176 YAPKGIRVNNIGPGAINTP--INAEKFAD---------PKQRADVESMIP-----MGYIG 219

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           K  +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 220 KPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

Length = 261

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  125 bits (315), Expect = 1e-34
 Identities = 84/264 (31%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK A++TG ARGIG A  + +V+ GA+V IADI+  A  A A  +    P    +  D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEI---GPAACAISLD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +  I   +   + + G +DIL NNA +         I D     +D +  INV G  
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALF----DLAPIVDITRESYDRLFAINVSGTL 113

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             M+  A+ M+ + R G II+ AS A   G      Y  +K A++ LT++    L ++GI
Sbjct: 114 FMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 173

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
            VN I+P  V        W    D   +        EK   +  G A   G   +A D+ 
Sbjct: 174 NVNAIAPGVVDGEH----WDGV-DAKFARYENRPRGEKKRLV--GEAVPFGRMGRAEDLT 226

Query: 252 EAALYLASDESKYISGHNLVVDGG 275
             A++LAS ++ YI      VDGG
Sbjct: 227 GMAIFLASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  130 bits (328), Expect = 2e-34
 Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 23/267 (8%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            ++  +TGGARGIG A    F   G +++I D D      LA++L      V     D++
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSV---QADIT 325

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E  +++      ++ GRLD+L NNAG+       K   +  A +F  +  +N+ GA   
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGI---AEVFKPSLEQSAEDFTRVYDVNLSGAFAC 382

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            + AA++M   + G I++  S+ASL+     +AY  SK A+  L+++ ACE    GIRVN
Sbjct: 383 ARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVN 440

Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
            ++P G   +  V A K+      SG          + + R +    G      ++AEA 
Sbjct: 441 TVAP-GYIETPAVLALKA------SG------RADFDSIRRRIP--LGRLGDPEEVAEAI 485

Query: 255 LYLASDESKYISGHNLVVDGGFTTSKN 281
            +LAS  + Y++G  L VDGG+T   +
Sbjct: 486 AFLASPAASYVNGATLTVDGGWTAFGD 512

Length = 520

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  125 bits (314), Expect = 2e-34
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 13/268 (4%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            L GK A+VTG A GIG+       + GA V IAD++     A+AD +  +      +  
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVRG 130
           DV+ E  +   I+    + G +DIL +NAG+     +  + I ++   ++  +  I+V G
Sbjct: 64  DVTNEDAVNAGIDKVAERFGSVDILVSNAGI-----QIVNPIENYSFADWKKMQAIHVDG 118

Query: 131 AALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           A L  K A K M    R G +I   SV S        AY  +KH ++GL +  A E  K+
Sbjct: 119 AFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            +R + + P G   + LV+         +  K     EE++ + V     + GV     D
Sbjct: 179 NVRSHVVCP-GFVRTPLVDK-----QIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVED 232

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +A+  L+L+S  S  ++G + VV  G+ 
Sbjct: 233 VAQTVLFLSSFPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 3e-34
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 24/268 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA---GIALADSLLSSSPLVTYL 69
           L+GKIA++TG + GIG A  + + K GA +V  DI+      G+A    L   +    Y+
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEA--HGYV 65

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            CDV+ E  +Q +++    + G +DIL NNAG++    K   + +  A +F  +I I++ 
Sbjct: 66  -CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGII----KRIPMLEMSAEDFRQVIDIDLN 120

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              +  K     M+ +  G II+  S+ S +G     AY  +K  +  LTKN A E G+ 
Sbjct: 121 APFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEA 180

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV--RGLANLKGVTLKA 247
            I+ N I P  +AT       +   D   S  P        ++ +  +  A   G     
Sbjct: 181 NIQCNGIGPGYIATPQTAPLRELQAD--GSRHP-------FDQFIIAKTPAARWG---DP 228

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGG 275
            D+A  A++LASD S +++GH L VDGG
Sbjct: 229 EDLAGPAVFLASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 3e-34
 Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 38/274 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI----ADIDDAAGIALADSLLSSSPLVTY 68
           L G++A+VTG ARG+G    R     GA V++    A   +AA  AL  +  ++  L   
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF- 67

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
              D++ E+ +        ++HGRLDIL NN G        + + + D      ++  ++
Sbjct: 68  ---DIADEEAVAAAFARIDAEHGRLDILVNNVGA----RDRRPLAELDDAAIRALLETDL 120

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
               L  + AA+ M  +  G II+  S+A  +   G   Y  +K  + GL +  A E G 
Sbjct: 121 VAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM---EELVRGLANLKGVTL 245
           +GI  N I+P   AT                     E    M     +   LA    +  
Sbjct: 181 HGITSNAIAPGYFAT---------------------ETNAAMAADPAVGPWLAQRTPLGR 219

Query: 246 KAR--DIAEAALYLASDESKYISGHNLVVDGGFT 277
             R  +IA AA++LAS  + Y++GH L VDGG++
Sbjct: 220 WGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  124 bits (313), Expect = 3e-34
 Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 17/266 (6%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHCDV 73
           GK+A+VT  + GIG A  R   + GA+V I   +    +  A S L +    V  +  D+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARN-RENLERAASELRAGGAGVLAVVADL 59

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           +  +DI  L+       GR+DIL NNAG            +    ++     + +     
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAG----GPPPGPFAELTDEDWLEAFDLKLLSVIR 115

Query: 134 GMKYAAKVMVPRRSGCI--ISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            ++     M  R  G I  IS+ +V      L      V++  ++GL K  + EL   G+
Sbjct: 116 IVRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSN--VARAGLIGLVKTLSRELAPDGV 173

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
            VN + P  + T  +    +         +      E+ E+ V     L  V  K  ++A
Sbjct: 174 TVNSVLPGYIDTERVRRLLE------ARAEKEGISVEEAEKEVASQIPLGRVG-KPEELA 226

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
               +LAS+++ YI+G  ++VDGG T
Sbjct: 227 ALIAFLASEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  123 bits (309), Expect = 1e-33
 Identities = 94/277 (33%), Positives = 130/277 (46%), Gaps = 43/277 (15%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-----DIDDAAGIALADSLLSSSPL 65
             L  K+A+VT    GIG A  R   + GA VV++     ++D A       + L    L
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAV------ATLQGEGL 59

Query: 66  -VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV---LGNQSKHKSITDFDANEFD 121
            VT   C V   +D + L+   ++ HG +DIL +NA V    GN      I D     +D
Sbjct: 60  SVTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGN------ILDSTEEVWD 113

Query: 122 NIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL--MGGLGPHAYTVSKHAIVGLT 179
            I+ +NV+  AL  K     M  R  G ++  +SVA+     GLGP  Y VSK A++GLT
Sbjct: 114 KILDVNVKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP--YNVSKTALLGLT 171

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL-VRGLA 238
           KN A EL    IRVNC++P  + TS     W      MD       EE   E L +R L 
Sbjct: 172 KNLAPELAPRNIRVNCLAPGLIKTSFSSALW------MDKAV----EESMKETLRIRRLG 221

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                  +  D A    +L S+++ YI+G  +VV GG
Sbjct: 222 -------QPEDCAGIVSFLCSEDASYITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  122 bits (309), Expect = 2e-33
 Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 20/269 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G++A++TGG  GIG A V  F+  GA+V + +       +L         +V     D
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVV---EGD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE----FDNIIRINV 128
           V+   D Q  ++ T+   G+LD    NAG+      + S+ D  A      FD I  +NV
Sbjct: 61  VTSYADNQRAVDQTVDAFGKLDCFVGNAGIW---DYNTSLVDIPAETLDTAFDEIFNVNV 117

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           +G  LG K A   +     G +I T S +S   G G   YT SKHA+VGL +  A EL  
Sbjct: 118 KGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAP 176

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
             IRVN ++P G  T +     +     +  G+    +   + +++  +  L     +  
Sbjct: 177 K-IRVNGVAPGGTVTDL-----RGPAS-LGQGETSISDSPGLADMIAAITPL-QFAPQPE 228

Query: 249 DIAEAALYLASDE-SKYISGHNLVVDGGF 276
           D     + LAS   S+ ++G  +  DGG 
Sbjct: 229 DHTGPYVLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  121 bits (307), Expect = 2e-33
 Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 7/192 (3%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE 76
           I ++TGG  GIG      F K GAKVVI DI++      A+++  +   V Y  CDVS  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           +++         + G + IL NNAGV+      K + +    E +    +N        K
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVVSG----KKLLELPDEEIEKTFEVNTLAHFWTTK 116

Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL---GKYGIRV 193
                M+ R  G I++ ASVA L+   G   Y  SK A VG  ++   EL   GK GI+ 
Sbjct: 117 AFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKT 176

Query: 194 NCISPFGVATSM 205
             + P+ + T M
Sbjct: 177 TLVCPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 5e-33
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 27/262 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           L+GK+A+VTGG +G+G A  R F + GA  +VI   +   G A A  L +      ++  
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+S  +D + ++       GRLD L N AG+    +   +I D     FD    +NVR  
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGL----TDRGTILDTSPELFDRHFAVNVRAP 119

Query: 132 ALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
              M+ A K+M  R++ G I++  S+++  G     AY  SK A+  LT+N A  L +  
Sbjct: 120 FFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNR 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCM-----DSGKPCEEEEEKMEELVRGLANLKGVTL 245
           IRVN ++   +AT          ED +      +     E+    +          G  L
Sbjct: 180 IRVNGLNIGWMATEG--------EDRIQREFHGAPDDWLEKAAATQPF--------GRLL 223

Query: 246 KARDIAEAALYLASDESKYISG 267
              ++A A  +L SDES  ++G
Sbjct: 224 DPDEVARAVAFLLSDESGLMTG 245

Length = 260

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  120 bits (303), Expect = 6e-33
 Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 18/266 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K AIVTGG  GIG AT R F + GAKV + D++  A   +A  + +         CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++    +   +       G +D+L NNAG      K    T  +   ++ +I IN+ G A
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAG----WDKFGPFTKTEPPLWERLIAINLTG-A 115

Query: 133 LGMKYA-AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L M +A    MV R +G I++ AS A+ +G  G   Y   K  +V  +K  A E  ++GI
Sbjct: 116 LHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
            VN + P    T++L +       C  +  P    E+  E   R +    G   +  D+ 
Sbjct: 176 TVNVVCPGPTDTALLDDI------CGGAENP----EKLREAFTRAIP--LGRLGQPDDLP 223

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
            A L+ +SD++ +I+G  L V GG T
Sbjct: 224 GAILFFSSDDASFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  120 bits (303), Expect = 6e-33
 Identities = 85/259 (32%), Positives = 125/259 (48%), Gaps = 20/259 (7%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE 76
           +AIVTGGA GIG+A      K GA VVIAD+      A+A ++  +      L C+V+ E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           QD++ ++  T+S+ G + IL NNAG  G              +F+   ++N+  A    +
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGG---PKPFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
             A  M     G I++ +S++S    +   AY  SK A+  +T+N A +LG  GIRVN +
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAV 177

Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALY 256
           +P  V T  L +             P  E E  M +         G   +  DIA AAL+
Sbjct: 178 APGAVKTDALASV----------LTP--EIERAMLK-----HTPLGRLGEPEDIANAALF 220

Query: 257 LASDESKYISGHNLVVDGG 275
           L S  S ++SG  L V GG
Sbjct: 221 LCSPASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 1e-32
 Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 34/281 (12%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           M+LN        L+ K+ IVTGGA GIG A      + GA  VI     A     A+ L 
Sbjct: 1   MDLN--------LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELR 51

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
           +  P   ++  D++ +   ++ +  T++K GR+D L NNAGV            F A+  
Sbjct: 52  ALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLE 111

Query: 121 DNIIRINVRGAALGMKYA-AKVMVP--RRS-GCIISTASVASLMGGLGPHAYTVSKHAIV 176
            N+I            Y  A   +P  + S G I++ +S  +L G  G   Y  +K A +
Sbjct: 112 RNLIHY----------YVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQL 161

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
            LT+  A  L K G+RVN + P  V T +  N   + +D           E K+  +   
Sbjct: 162 ALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDD----------PEAKLAAITAK 211

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +     +T  A +IA+ A++L S+ S + +G  L VDGG+ 
Sbjct: 212 IPLGHRMT-TAEEIADTAVFLLSERSSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 1e-32
 Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 6/192 (3%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           +L+GK+A++TGG++GIG A     +  G KV I    D   +  A + L++   V  L  
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITA-RDQKELEEAAAELNNKGNVLGLAA 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV  E D+Q  ++  ++  G LD+L  NAGV         + +    E+  +I  N+ GA
Sbjct: 62  DVRDEADVQRAVDAIVAAFGGLDVLIANAGV----GHFAPVEELTPEEWRLVIDTNLTGA 117

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +K A   +  R  G II+ +S+A      G  AY  SK  +VG ++    +L +YGI
Sbjct: 118 FYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGI 176

Query: 192 RVNCISPFGVAT 203
           +V+ I P  VAT
Sbjct: 177 KVSTIMPGSVAT 188

Length = 237

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 3e-32
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 22/262 (8%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           + A+VTG A GIG+A  R F+  G +V+  DID AA  A AD+L         + CD++ 
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL--GDARFVPVACDLTD 60

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
              +   +    ++ G +D+L  NAG     S H   T   +   DN   +N+  A L +
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAASLHD--TTPASWRADN--ALNLEAAYLCV 116

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +   + M+ R  G +++  SV   M  LG  AY+ +K  ++  TK  A E G++GIR N 
Sbjct: 117 EAVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANA 175

Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL 255
           ++P  V T     AW++               +  EEL +        T    D+A A L
Sbjct: 176 VAPGTVKTQ----AWEA---------RVAANPQVFEELKKWYPLQDFAT--PDDVANAVL 220

Query: 256 YLASDESKYISGHNLVVDGGFT 277
           +LAS  ++ I+G  L VDGG T
Sbjct: 221 FLASPAARAITGVCLPVDGGLT 242

Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 6e-32
 Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 38/276 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+ A+VTG ++GIG A      + GA+V++   D A   A A+SL         L  D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVRGA 131
           V+    ++  I+   ++ G +DIL NNAG+     + ++ + DF A+ F+ ++R N+   
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGM-----QFRTPLEDFPADAFERLLRTNISSV 122

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +  A+ M+ R +G II+ ASV S +   G   YT +K A+  LTK  A +  K+G+
Sbjct: 123 FYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGL 182

Query: 192 RVNCISPFGVATSM---LV-----NAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
           + N I+P    T +   LV     +AW   E    +G+       K+EELV         
Sbjct: 183 QCNAIAPGYFDTPLNAALVADPEFSAW--LEKRTPAGR-----WGKVEELV--------- 226

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
                    A ++LASD S +++GH L VDGG T S
Sbjct: 227 --------GACVFLASDASSFVNGHVLYVDGGITAS 254

Length = 255

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  117 bits (296), Expect = 7e-32
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 27/267 (10%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVS 74
           ++ +VTG +RG+G A  R F + GA+VV+          A+A      +  +     DV 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAI---QADVR 57

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQS----KHKSITDFDANEFDNIIRINVRG 130
               +Q +I    +  G +D + NNA  L +      + K+    D  ++   +   V+G
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNA--LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKG 115

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A   ++        R SG +I+  +       +  H YT +K A++G T+N A ELG YG
Sbjct: 116 ALNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYG 175

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           I VN +S   +  +             D+     +E   + + +     L  VT    DI
Sbjct: 176 ITVNMVSGGLLKVT-------------DASAATPKE---VFDAIAQTTPLGKVTTPQ-DI 218

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A+A L+ AS  ++ ++G NLVVDGG  
Sbjct: 219 ADAVLFFASPWARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  123 bits (309), Expect = 2e-31
 Identities = 84/270 (31%), Positives = 126/270 (46%), Gaps = 15/270 (5%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTY 68
           KTL  ++A VTGGA GIG  T R     GA VV+AD++  A  A+A  +     +     
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA 469

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           L  DV+ EQ ++         +G +DI+ NNAG+    +      +    E+   + I  
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI----ATSSPFEETTLQEWQLNLDILA 525

Query: 129 RGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            G  L  + A + M  +   G I+  AS  ++  G    AY+ +K A   L +  A E G
Sbjct: 526 TGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGG 585

Query: 188 KYGIRVNCISPFGV--ATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
            YGIRVN ++P  V   + +    W+  E     G P     +++EE       LK   +
Sbjct: 586 TYGIRVNTVNPDAVLQGSGIWDGEWRE-ERAAAYGIP----ADELEEHYAKRTLLK-RHI 639

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
              DIAEA  +LAS +S+  +G  + VDGG
Sbjct: 640 FPADIAEAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  116 bits (292), Expect = 5e-31
 Identities = 82/271 (30%), Positives = 125/271 (46%), Gaps = 36/271 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA----DIDDAAGIALADSLLSSSPLVTY 68
           L+GK A++TGG  GIG A    F + GA V I     + DDA              L+  
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLL-- 81

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  D+  E   ++L+   + + G+LDIL NNA     Q   +SI D    + +   R N+
Sbjct: 82  IPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAY---QHPQESIEDITTEQLEKTFRTNI 138

Query: 129 RGAALGMKYAAKVMVP--RRSGCIISTASVASLMGGLGPHA--YTVSKHAIVGLTKNTAC 184
                 M Y  K  +P  ++   II+T SV +  G   PH   Y  +K AIV  T+  + 
Sbjct: 139 ----FSMFYLTKAALPHLKKGSSIINTTSVTAYKG--SPHLLDYAATKGAIVAFTRGLSL 192

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           +L + GIRVN ++P  + T ++               P    EEK+ E   G     G  
Sbjct: 193 QLAEKGIRVNAVAPGPIWTPLI---------------PSSFPEEKVSEF--GSQVPMGRA 235

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGG 275
            +  ++A A ++LAS +S Y++G  L V+GG
Sbjct: 236 GQPAEVAPAYVFLASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  115 bits (290), Expect = 8e-31
 Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 51/285 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLH 70
           L+GK  ++TG    IG A V+  ++ G  V+ ADID  A   L +SL     S  ++ + 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH--KSITDFDANEFDNIIRINV 128
            D++ ++ ++  ++ +  K+G++D   N A     ++K   K   D   ++F+  + +++
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAY---PRNKDYGKKFFDVSLDDFNENLSLHL 118

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-------------AYTVSKHAI 175
             + L  +  AK    +  G +++   ++S+ G + P               Y   K  I
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVN---ISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGI 175

Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLV---NAWKSCEDCMDSGKPCEEEEEKMEE 232
           + LTK  A       IRVNC+SP G+  +      NA+K C         C         
Sbjct: 176 IHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKC---------C--------- 217

Query: 233 LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                 N KG+ L   DI    ++L SD+SKYI+G N++VD GF+
Sbjct: 218 ------NGKGM-LDPDDICGTLVFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 9e-31
 Identities = 82/279 (29%), Positives = 124/279 (44%), Gaps = 43/279 (15%)

Query: 8   KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID---DAAGIALADSLLSSSP 64
           K    L+GK+A++TGG  GIG A   LF K GA + I  +D   DA              
Sbjct: 39  KGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKC 98

Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
           L+  +  DVS E   ++ +  T+ + GRLDIL NNA     Q   +S+ D  A + D   
Sbjct: 99  LL--IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAF---QYPQQSLEDITAEQLDKTF 153

Query: 125 RINVRGAALGMKYAAKVMVP--RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           + N+        +  K  +P  ++   II+T S+    G      Y+ +K AI   T++ 
Sbjct: 154 KTNI----YSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSL 209

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSG------KPCEEEEEKMEELVRG 236
           A  L + GIRVN ++P  + T  L+ +    E     G      +P + EE         
Sbjct: 210 AQSLVQKGIRVNAVAPGPIWTP-LIPSDFDEEKVSQFGSNTPMQRPGQPEE--------- 259

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                        +A A ++LAS +S YI+G  L V+GG
Sbjct: 260 -------------LAPAYVFLASPDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  114 bits (288), Expect = 1e-30
 Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 30/267 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK AI+TG   GIG+     F   GA VV++DI+  A   + D +           CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ EQ++  L +  +SK G++DIL NNAG  G +       D    +F     +NV    
Sbjct: 69  ITSEQELSALADFALSKLGKVDILVNNAGGGGPKP-----FDMPMADFRRAYELNVFSFF 123

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +  A  M     G I++  S+A+    +   +Y  SK A   L +N A +LG+  IR
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----AR 248
           VN I+P  + T  L +                E E+KM         L+   ++     +
Sbjct: 184 VNGIAPGAILTDALKSVITP------------EIEQKM---------LQHTPIRRLGQPQ 222

Query: 249 DIAEAALYLASDESKYISGHNLVVDGG 275
           DIA AAL+L S  + ++SG  L V GG
Sbjct: 223 DIANAALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  114 bits (288), Expect = 1e-30
 Identities = 81/268 (30%), Positives = 122/268 (45%), Gaps = 32/268 (11%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVS 74
           ++AIVT    GIG+A   L  + G  + I    D  G    A+ + S          D+S
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS 62

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
              +    ++  I + GR+D+L NNAG +          D D +E+  I  ++V GA L 
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAP----FLDMDFDEWRKIFTVDVDGAFLC 118

Query: 135 MKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
            + AA+ MV + + G II+  SV       G  AYT +KHA+ GLTK  A EL ++GI V
Sbjct: 119 SQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILV 178

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----ARD 249
           N ++P  +AT M         + MD      +                G+ L       +
Sbjct: 179 NAVAPGAIATPM---------NGMDDSDVKPDSRP-------------GIPLGRPGDTHE 216

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA    +L S+ + Y +G +L+VDGGF 
Sbjct: 217 IASLVAWLCSEGASYTTGQSLIVDGGFM 244

Length = 256

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 3e-30
 Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA-LADSLLSSSPLVTYLHC 71
           L+G++A VTG   GIG+       + GA V + D+    G+A  A+ + ++      +  
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+ + D++  +  T ++ G L +  N AG+           + +  ++  ++ IN+ G 
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAE----EMEEEQWQTVMDINLTGV 121

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLM--GGLGPHAYTVSKHAIVGLTKNTACELGKY 189
            L  +  A+ M+    G I++ AS++ ++   GL    Y  SK  ++ L+K+ A E    
Sbjct: 122 FLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGR 181

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           GIRVN ISP   AT M             + +P    + K+ E    +  +  V     +
Sbjct: 182 GIRVNSISPGYTATPM-------------NTRPEMVHQTKLFEEQTPMQRMAKV----DE 224

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +   A++L SD + + +G +L+VDGGF 
Sbjct: 225 MVGPAVFLLSDAASFCTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 3e-30
 Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 25/265 (9%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVS 74
           K+ I+TG +RGIG AT  L  + G  V +  + +  A  A+  ++         +  DV+
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E D+  L      + GRLD L NNAG+L  Q +   +   DA     I   NV G+ L 
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMR---LEQMDAARLTRIFATNVVGSFLC 119

Query: 135 MKYAAKVMVPR---RSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTACELGKYG 190
            + A K M  R   R G I++ +S+A+ +G  G +  Y  SK AI  +T   A E+   G
Sbjct: 120 AREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEG 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN + P  + T +  +           G+P      +++ +  G+   +G T  A ++
Sbjct: 180 IRVNAVRPGVIYTEIHASG----------GEP-----GRVDRVKAGIPMGRGGT--AEEV 222

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A A L+L SDE+ Y +G  + V GG
Sbjct: 223 ARAILWLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  112 bits (283), Expect = 7e-30
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 49/228 (21%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD---------------------AA 51
            +G++ +VTG   G+G A    F + GAKVV+ D+                       A 
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAG 62

Query: 52  GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS 111
           G A+A+               V   +D + ++   I   GR+DIL NNAG+L ++S  K 
Sbjct: 63  GKAVANY------------DSV---EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAK- 106

Query: 112 ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS 171
           +++ D   +D ++R++++G+    + A   M  ++ G II+T+S A L G  G   Y+ +
Sbjct: 107 MSEED---WDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAA 163

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSM--------LVNAWK 211
           K  ++GL+   A E  KY I  N I+P    + M        L +A K
Sbjct: 164 KLGLLGLSNTLAIEGAKYNITCNTIAP-AAGSRMTETVMPEDLFDALK 210

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  112 bits (281), Expect = 1e-29
 Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 22/268 (8%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
             K+A+VTG  +GIG A  +  V+ G KV I D ++    A AD L         +  DV
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           S    +   +   +   G L+++ NNAGV    +  ++IT+    +FD +  INV G   
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGV-APTTPIETITE---EQFDKVYNINVGGVIW 116

Query: 134 GMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           G++ A +        G II+  S A ++G      Y+ +K A+ GLT+  A +L   GI 
Sbjct: 117 GIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGIT 176

Query: 193 VNCISPFGVATSMLVN-AWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
           VN  +P  V T M+ + A +  E   ++GKP   +E  ME+        K +TL      
Sbjct: 177 VNAYAPGIVKTPMMFDIAHQVGE---NAGKP---DEWGMEQFA------KDITLGRLSEP 224

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGG 275
            D+A    +LA  +S YI+G  ++VDGG
Sbjct: 225 EDVANCVSFLAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (280), Expect = 2e-29
 Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 24/269 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHC 71
           +  +  +VTGG+RG+G A  R F + GA+VV+     + A  ALAD L         L  
Sbjct: 3   ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQA 59

Query: 72  DVSLEQDIQNLINVTISKHGR-LDILFNNA--GVLGNQSKHKSITDFDANEFDNIIRINV 128
           DV+  + +Q +        G+ +  + NNA      +    K   D    +F   +  +V
Sbjct: 60  DVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSV 119

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           +GA   ++ A   M  +  G II+  +       +  H YT +K A++GLT+N A ELG 
Sbjct: 120 KGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGP 179

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
           YGI VN +S   + T+             D+     +E   + +L+     L+ VT    
Sbjct: 180 YGITVNMVSGGLLRTT-------------DASAATPDE---VFDLIAATTPLRKVTTPQ- 222

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           + A+A L+ AS  ++ ++G NLVVDGG  
Sbjct: 223 EFADAVLFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  110 bits (277), Expect = 4e-29
 Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 15/265 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            EGK+ +VTG A+GIG          GA+V++ D  +     +   +L++         D
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSE-LVHEVLAEILAAGDAAHVHTAD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +      Q ++   + + GR+D+L NN    G     K    ++  + +  IR ++    
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNV---GGTIWAKPYEHYEEEQIEAEIRRSLFPTL 117

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M+ R+ G I++ +S+A+   G+    Y+ +K  +  LT + A E  + GIR
Sbjct: 118 WCCRAVLPHMLERQQGVIVNVSSIATR--GIYRIPYSAAKGGVNALTASLAFEHARDGIR 175

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV--RGLANLKGVTLKARDI 250
           VN ++P G          K      ++    E+E+   + +V     ++L G      + 
Sbjct: 176 VNAVAPGGTEAP----PRKIPR---NAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQ 228

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
             A L+LASDE+ YI+G  L V GG
Sbjct: 229 VRAILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 6e-29
 Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 30/269 (11%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           +L GK  ++TG A+GIG        ++GA+++I DI           L            
Sbjct: 6   SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPF 65

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +V+ +Q+++  I       G +D+L NNAG+   Q +H   T+F   E++++I +N    
Sbjct: 66  NVTHKQEVEAAIEHIEKDIGPIDVLINNAGI---QRRH-PFTEFPEQEWNDVIAVNQTAV 121

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  +  A+ MV R++G II+  S+ S +G      Y  SK A+  LT+    EL ++ I
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR--- 248
           +VN I+P    T M               K   E+E     L +        T  AR   
Sbjct: 182 QVNGIAPGYFKTEMT--------------KALVEDEAFTAWLCKR-------TPAARWGD 220

Query: 249 --DIAEAALYLASDESKYISGHNLVVDGG 275
             ++  AA++L+S  S +++GH L VDGG
Sbjct: 221 PQELIGAAVFLSSKASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  109 bits (275), Expect = 1e-28
 Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 15/265 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+G++A++TGG  G+G A V  FV  GAKV + D   A  +A   +    + +      D
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDR-SAEKVAELRADFGDAVVGV--EGD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE-FDNIIRINVRGA 131
           V    D +  +   + + G+LD    NAG+    +    I +   +E FD +  INV+G 
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            LG K A   +     G +I T S A    G G   YT SKHA+VGL K  A EL  + I
Sbjct: 119 ILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-I 176

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P G+ T  L       +       P       ++++++ +  L G   +  D  
Sbjct: 177 RVNGVAPGGMVTD-LRGPASLGQGETSISTP------PLDDMLKSILPL-GFAPEPEDYT 228

Query: 252 EAALYLAS-DESKYISGHNLVVDGG 275
            A ++LAS  +++  +G  +  DGG
Sbjct: 229 GAYVFLASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  106 bits (268), Expect = 1e-28
 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 11/174 (6%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADI--DDAAGIA-LADSLLSSSPLVTYLHCD 72
              ++TGG  G+G A  R     GA+ ++       A G A L   L +    VT   CD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +  L+    +  G LD + +NAGVL +      + +     F+ ++   V GA 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDD----GPLEELTPERFERVLAPKVTGAW 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
                  ++      G  +  +SVA ++G  G   Y  +  A+  L ++   E 
Sbjct: 117 ----NLHELTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  109 bits (273), Expect = 2e-28
 Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 26/268 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK A++TG + GIG+     +V+ GA+V IA     A   LAD + +S   V  + CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  Q + ++++   ++ G +DI   NAG++        + D    EF  +   NV G  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVT----PMLDMPLEEFQRLQNTNVTGVF 122

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHA--YTVSKHAIVGLTKNTACELGKY 189
           L  + AAK MV + + G II+TAS++  +  +      Y  SK A++ LTK  A EL  +
Sbjct: 123 LTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPH 182

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            IRVN +SP  + T ++              +P  E +   E  +       G   +  +
Sbjct: 183 KIRVNSVSPGYILTELV--------------EPYTEYQPLWEPKIP-----LGRLGRPEE 223

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +A   LYLAS+ S Y++G ++V+DGG+T
Sbjct: 224 LAGLYLYLASEASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  108 bits (272), Expect = 2e-28
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 4/196 (2%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK A++TG  RGIG A      K G  V +    +    A+A+ + +    V     D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  +++   I    ++ G +DIL NNAG+    SK     + D  E++ II++N+ G  
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGI----SKFGKFLELDPAEWEKIIQVNLMGVY 120

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M+ R+SG II+ +S A   G     AY+ SK  ++GLT++   E+ K+ IR
Sbjct: 121 YATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIR 180

Query: 193 VNCISPFGVATSMLVN 208
           V  ++P  VAT M V+
Sbjct: 181 VTALTPSTVATDMAVD 196

Length = 239

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 3e-28
 Identities = 75/238 (31%), Positives = 107/238 (44%), Gaps = 29/238 (12%)

Query: 20  VTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDI 79
           +TG A GIG AT  LF   G +V   DI++A   ALA  L + +     L  DV+     
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGAL--DVTDRAAW 63

Query: 80  QN-LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
              L +   +  GRLD+LFNNAG+L    +     D      D +I INV+G   G  +A
Sbjct: 64  DAALADFAAATGGRLDVLFNNAGIL----RGGPFEDIPLEAHDRVIDINVKGVLNGA-HA 118

Query: 139 AKVMVPRRSG-CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
           A   +    G  +I+T+S +++ G  G   Y+ +K A+ GLT+    E  ++GIRV  + 
Sbjct: 119 ALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVM 178

Query: 198 PFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL 255
           P  V T+ML                     E      + L    GV L   D+AEA  
Sbjct: 179 PLFVDTAMLDGT----------------SNEVDAGSTKRL----GVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  108 bits (270), Expect = 4e-28
 Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 24/266 (9%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLH 70
            L GK+AIVTGGA+GIG+A      + GAKVVI  +    A   L + L      V  + 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS  +D   L+   ++  G++DIL NNAG+    ++ ++    +  +++ +I +N+  
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGI----TRDRTFKKLNREDWERVIDVNLSS 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                      +     G IIS +S+    GG G   Y+ +K  ++G TK+ A EL K  
Sbjct: 119 VFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTN 178

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           + VN I P  + T M+                 E  EE  +++V  +   K    +A +I
Sbjct: 179 VTVNAICPGFIDTEMVA----------------EVPEEVRQKIVAKIP--KKRFGQADEI 220

Query: 251 AEAALYLASDESKYISGHNLVVDGGF 276
           A+  +YL  D + YI+G  L ++GG 
Sbjct: 221 AKGVVYLCRDGA-YITGQQLNINGGL 245

Length = 247

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  108 bits (270), Expect = 4e-28
 Identities = 79/266 (29%), Positives = 135/266 (50%), Gaps = 25/266 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+AI+TG   G+G+       K GA +V   + +A         L       ++  D
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRK--FHFITAD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +  ++DI ++++  +   G +DIL NNAG++    + + + +F   ++D++I IN +   
Sbjct: 64  LIQQKDIDSIVSQAVEVMGHIDILINNAGII----RRQDLLEFGNKDWDDVININQKTVF 119

Query: 133 LGMKYAAKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  AK  V + +G  II+ AS+ S  GG+   +YT SK A++GLT+  A EL +Y I
Sbjct: 120 FLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNI 179

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV-RGLANLKGVTLKARDI 250
            VN I+P  +AT              D+      +  + E ++ R  A+  G      D+
Sbjct: 180 NVNAIAPGYMAT--------------DNTAALRADTARNEAILERIPASRWGT---PDDL 222

Query: 251 AEAALYLASDESKYISGHNLVVDGGF 276
           A  A++L+S  S Y++G+ L VDGG+
Sbjct: 223 AGPAIFLSSSASDYVTGYTLAVDGGW 248

Length = 251

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  107 bits (269), Expect = 7e-28
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 23/262 (8%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVS 74
           KIA+VTG  RGIG A  R  +  G +V+      +       +    +   V     DV+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
             ++    +     + G +DIL NNAG+    ++          E++++I  N+      
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGI----TRDSVFKRMSHQEWNDVINTNLNSVFNV 118

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            +     M  +  G II+ +SV  L G  G   Y+ +K  ++G TK  A E  +YGI VN
Sbjct: 119 TQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVN 178

Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
           CI+P  +AT M V       + + S       +  M+ L               +IA A 
Sbjct: 179 CIAPGYIATPM-VEQMG--PEVLQSIV----NQIPMKRLG-----------TPEEIAAAV 220

Query: 255 LYLASDESKYISGHNLVVDGGF 276
            +L S+ + +I+G  + ++GG 
Sbjct: 221 AFLVSEAAGFITGETISINGGL 242

Length = 245

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  107 bits (270), Expect = 9e-28
 Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 5/197 (2%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTY 68
              ++GK A++TG + GIG    +   + G  +++    +    ALA  L   +   V  
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEV 60

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  D+S  + ++ L +    + G +D+L NNAG            +   +E + +I++N+
Sbjct: 61  IPADLSDPEALERLEDELKERGGPIDVLVNNAG----FGTFGPFLELSLDEEEEMIQLNI 116

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
                  K     MV R +G II+  S A L+       Y+ +K  ++  ++    EL  
Sbjct: 117 LALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKG 176

Query: 189 YGIRVNCISPFGVATSM 205
            G++V  + P    T  
Sbjct: 177 TGVKVTAVCPGPTRTEF 193

Length = 265

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 1e-27
 Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 8/197 (4%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL--LSSSPLVTYLHCD 72
           GK+ I+TG + GIG A      + GA++V+A  ++    +LA  L       LV  +  D
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALV--VPTD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  +  + LI   +++ G +DIL NNAG+    S+   +TD     F+ ++R+N  GA 
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGI-TMWSRFDELTDLSV--FERVMRVNYLGAV 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
                A   +   R G I+  +S+A L G      Y  SKHA+ G   +   EL   G+ 
Sbjct: 116 YCTHAALPHLKASR-GQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Query: 193 VNCISPFGVATSMLVNA 209
           V  + P  VAT +   A
Sbjct: 175 VTVVCPGFVATDIRKRA 191

Length = 263

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  106 bits (267), Expect = 1e-27
 Identities = 82/272 (30%), Positives = 127/272 (46%), Gaps = 32/272 (11%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           ++ GKI +VTGG+RGIG    + F++ GA+V+I+     A    A+  LS+      +  
Sbjct: 3   SVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEE-LSAYGECIAIPA 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG- 130
           D+S E+ I+ L+     +  RLD+L NNAG     +    +  F  + +D ++ INV+  
Sbjct: 62  DLSSEEGIEALVARVAERSDRLDVLVNNAGA----TWGAPLEAFPESGWDKVMDINVKSV 117

Query: 131 -----AALGM-KYAAKVMVPRRSGCIISTASVASLMG-GLGPHAYTVSKHAIVGLTKNTA 183
                A L + + AA    P R   +I+  S+A ++  GL  ++Y  SK A+  LT+  A
Sbjct: 118 FFLTQALLPLLRAAATAENPAR---VINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLA 174

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            EL    I VN I+P    + M                   E EEK   L R        
Sbjct: 175 KELAGEHITVNAIAPGRFPSKMTAFLLND--------PAALEAEEKSIPLGR-------- 218

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             +  D+A  A+ LAS    Y++G  + VDGG
Sbjct: 219 WGRPEDMAGLAIMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 1e-27
 Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 20/235 (8%)

Query: 20  VTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDI 79
           +TG A G+G A    + + G ++ +AD+++  G      L  +     Y  CDV     +
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 80  QNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAA 139
             L      K G +D++ NNAGV    +      +    ++D  I IN+ G   G K   
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGV----ASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 140 KVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPF 199
            +   ++SG I++ AS+A LM G    +Y V+K  +V L++    EL    I V+ + P 
Sbjct: 121 PLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPS 180

Query: 200 GVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
              T++L        D      P       M+  V  L  L+   + A DIA+  
Sbjct: 181 FFQTNLL--------DSFRGPNP------AMKAQVGKL--LEKSPITAADIADYI 219

Length = 270

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  106 bits (267), Expect = 1e-27
 Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 43/277 (15%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI--ADIDDAAGIALAD-SLLSSSPLVTYL 69
             GK+A+VTG +RGIG+A      + G  + +  A    AA     +   L    L   +
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALA--V 59

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNA--GVLGNQSKHKSITDFDANEFDNIIRIN 127
             +V   + I+ +      + GRLD+  NNA  GVL      +   + + + +D  + IN
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVL------RPAMELEESHWDWTMNIN 113

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT-------VSKHAIVGLTK 180
            +      + AAK+M     G IIS +S       LG   Y        VSK A+  LT+
Sbjct: 114 AKALLFCAQEAAKLMEKVGGGKIISLSS-------LGSIRYLENYTTVGVSKAALEALTR 166

Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL 240
             A EL   GI VN +S   V T  L              K     EE +E+        
Sbjct: 167 YLAVELAPKGIAVNAVSGGAVDTDAL--------------KHFPNREELLEDARA--KTP 210

Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            G  ++  D+A A L+L S E+  I G  ++VDGG +
Sbjct: 211 AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 2e-27
 Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)

Query: 13  LEGKIAIVTGGA-RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL--VTYL 69
           L GK+ +VT  A  GIG AT R  ++ GA+VVI+DI +      AD L +   L  V  +
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            CDV+ E  +  LI+  + + GRLD+L NNAG LG Q     + D   +E+  ++ + + 
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVNNAG-LGGQ---TPVVDMTDDEWSRVLDVTLT 130

Query: 130 GAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           G     + A + M  R   G I++ ASV       G   Y  +K  ++ LT+ +A E  +
Sbjct: 131 GTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAE 190

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
           YG+R+N ++P       L                     E ++EL    A   G   +  
Sbjct: 191 YGVRINAVAPSIAMHPFLAKV---------------TSAELLDELAAREAF--GRAAEPW 233

Query: 249 DIAEAALYLASDESKYISG 267
           ++A    +LASD S Y++G
Sbjct: 234 EVANVIAFLASDYSSYLTG 252

Length = 262

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  105 bits (265), Expect = 3e-27
 Identities = 69/202 (34%), Positives = 91/202 (45%), Gaps = 24/202 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLL----------- 60
           L GK+A VTG +RGIG A      K GA VV+ A          A SL            
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 61  ----SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD 116
                + P+V     DV  E  ++ L+  T+ + GRLDIL NNAG     S    + D  
Sbjct: 61  AAGGQALPIV----VDVRDEDQVRALVEATVDQFGRLDILVNNAGA-IWLS---LVEDTP 112

Query: 117 ANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV 176
           A  FD + R+N+RG  L  + A   MV    G I++ +   SL    G  AY   K  + 
Sbjct: 113 AKRFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMS 172

Query: 177 GLTKNTACELGKYGIRVNCISP 198
            LT   A EL ++GI VN + P
Sbjct: 173 RLTLGLAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 3e-27
 Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 57/286 (19%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI------------ADIDDAAGIALADSLL 60
           LEGK+A+VTG + G+G    ++  + GAKVV+            A+I+   G A   SL 
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSL- 65

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                      DV+  Q I+  +    ++ G +DIL NN+GV    S  + + D    +F
Sbjct: 66  -----------DVTDYQSIKAAVAHAETEAGTIDILVNNSGV----STTQKLVDVTPADF 110

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGC--------IISTASVASL--MGGLGPHAYTV 170
           D +   N RGA    +  AK M+ R  G         II+ ASVA L  +  +G   Y +
Sbjct: 111 DFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG--LYCM 168

Query: 171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM 230
           SK A+V +T+  A E G++GI VN I P  + T +  + W++               E+ 
Sbjct: 169 SKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET---------------EQG 213

Query: 231 EELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
           ++LV  L   K V  K  D+    L LA+DES++I+G  +  D GF
Sbjct: 214 QKLVSMLPR-KRVG-KPEDLDGLLLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 4e-27
 Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 26/268 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ ++A+VTG  RG+G A    F + GA V+IA   ++    +A+ + ++      +  D
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++  +    L    +   GRLDI+ NN G     +    +      +  +    NV  A 
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVG----GTMPNPLLSTSTKDLADAFTFNVATAH 123

Query: 133 LGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
                A  +M+     G +I+ +S    + G G  AY  +K A+   T+  A +L    I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-I 182

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL--VRGLANLKGVTLKARD 249
           RVN I+P  + TS L       E    +    +E    ME+   +R L +         D
Sbjct: 183 RVNAIAPGSILTSAL-------EVVAAN----DELRAPMEKATPLRRLGD-------PED 224

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA AA+YLAS    Y++G  L VDGG T
Sbjct: 225 IAAAAVYLASPAGSYLTGKTLEVDGGLT 252

Length = 263

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  104 bits (260), Expect = 6e-27
 Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 7/188 (3%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K A+VTG +RGIGEAT RL    G +V I   D+A   A A   L     V  L  DV  
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQEL---EGVLGLAGDVRD 57

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E D++  ++      G LD L NNAGV       K + +    E+  ++  N+ GA   +
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGV----GVMKPVEELTPEEWRLVLDTNLTGAFYCI 113

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
             AA  ++ R  G I++  S+A      G  AY  SK  ++GL++    +L +  IRV  
Sbjct: 114 HKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVN 173

Query: 196 ISPFGVAT 203
           + P  V T
Sbjct: 174 VMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (262), Expect = 7e-27
 Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 31/271 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K+ ++TGGA+G+G A      + GAK+ + D++            +    V     +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGN----QSK-HKSITDFDANEFDNIIRIN 127
           V+ E+D++          G+L+ L NNAG+L +    ++K  K  +     +F ++I +N
Sbjct: 63  VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 128 VRGAALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           + G  L  + AA  M+     G II+ +S+A   G +G   Y+ SK  +  +T   A EL
Sbjct: 123 LTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNMGQTNYSASKAGVAAMTVTWAKEL 181

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL--VRGLANLKGVT 244
            +YGIRV  I+P  + T M             + KP  E  E++E++  V  L       
Sbjct: 182 ARYGIRVAAIAPGVIETEMT-----------AAMKP--EALERLEKMIPVGRLG------ 222

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGG 275
            +  +IA    ++   E+ Y++G  L +DGG
Sbjct: 223 -EPEEIAHTVRFII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  104 bits (262), Expect = 1e-26
 Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 42/285 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K+A++TGG   +G A  R   + GAKV     +   G  +A  + +       L  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSK------------HKSITDFDANEF 120
           V     ++      +++ G +DIL N AG  GN                ++  D D   +
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAG--GNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           + +  +N+ G+ L  +   K M+ ++ G II+ +S+ +        AY+ +K A+   T+
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQ 180

Query: 181 NTACELGKYGIRVNCISP-FGVA---TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
             A E    G+RVN I+P F V      +L+N           G   +          R 
Sbjct: 181 WLAVEFATTGVRVNAIAPGFFVTPQNRKLLIN---------PDGSYTD----------RS 221

Query: 237 LANLKGVTL----KARDIAEAALYLASDE-SKYISGHNLVVDGGF 276
              L    +    K  ++  A L+LAS++ S +++G  + VDGGF
Sbjct: 222 NKILGRTPMGRFGKPEELLGALLFLASEKASSFVTGVVIPVDGGF 266

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 1e-26
 Identities = 76/273 (27%), Positives = 114/273 (41%), Gaps = 48/273 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI---ADIDDAAGIALADSLLSSSPLVTYL 69
           L G++ +VTGG RGIG    R F+  GA VV+      +   G               + 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRP-----------AEFH 52

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV     +  L++  + +HGRLD+L NNAG     S +    +      + I+ +N+ 
Sbjct: 53  AADVRDPDQVAALVDAIVERHGRLDVLVNNAG----GSPYALAAEASPRFHEKIVELNLL 108

Query: 130 GAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
              L  + A  VM  +   G I++  SV+      G  AY  +K  ++ LT++ A E   
Sbjct: 109 APLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP 168

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
             +RVN +    V T               S     + E        G+A +   T+   
Sbjct: 169 -KVRVNAVVVGLVRTEQ-------------SELHYGDAE--------GIAAV-AATVPLG 205

Query: 249 ------DIAEAALYLASDESKYISGHNLVVDGG 275
                 DIA A L+LASD + Y+SG NL V GG
Sbjct: 206 RLATPADIAWACLFLASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  104 bits (262), Expect = 1e-26
 Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 13/252 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHC 71
           L+GK+ I+TG + GIGE       + GA++V++   +     +    L   +P    +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+S  +D + ++   +   G LDIL NNAG+    S      D   +    I+ +N  G 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGI----SMRSLFHDTSIDVDRKIMEVNYFGP 116

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               K A   ++ R  G I+  +S+A  +G     AY  SKHA+ G   +   EL +  I
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNI 176

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM------EELVRGLANLKGVTL 245
            V  + P  + T++ +NA     D   S K  +     M       E+++ +A  K    
Sbjct: 177 SVTVVCPGLIDTNIAMNALS--GDGSMSAKMDDTTANGMSPEECALEILKAIALRKREVF 234

Query: 246 KARDIAEAALYL 257
            AR +   A+YL
Sbjct: 235 YARQVPLLAVYL 246

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 1e-26
 Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 42/280 (15%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI---------DDAAGIALADSLLSS 62
            L+G++ IVTG   GIG A    F   GA+VV+ DI           +A  A+ D ++++
Sbjct: 3   LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62

Query: 63  SPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    D++      NL++  +   G LD+L NNAG+L    + + I +    E+D 
Sbjct: 63  GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGIL----RDRMIANMSEEEWDA 118

Query: 123 IIRINVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIV 176
           +I ++++G    +++AA                II+T+S A L G +G   Y+ +K  I 
Sbjct: 119 VIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIA 178

Query: 177 GLTKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
            LT   A ELG+YG+ VN I+P   A T M    +    + M   KP E E + M     
Sbjct: 179 ALTLVAAAELGRYGVTVNAIAP--AARTRMTETVFA---EMM--AKPEEGEFDAMAP--- 228

Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
              N          ++   ++L S ES+ ++G    V+GG
Sbjct: 229 --EN----------VSPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 1e-26
 Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYL 69
             L GK A+VTGG +GIG ATV   ++ GA+VV            A S     P  V ++
Sbjct: 5   LELAGKRALVTGGTKGIGAATVARLLEAGARVVTT----------ARSRPDDLPEGVEFV 54

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN-- 127
             D++  +    +    + + G +DIL +  G  G+ +           E+ + + +N  
Sbjct: 55  AADLTTAEGCAAVARAVLERLGGVDILVHVLG--GSSAPAGGFAALTDEEWQDELNLNLL 112

Query: 128 --VR-GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTA 183
             VR   AL        M+ R SG II   S+   +       AY  +K A+   +K+ +
Sbjct: 113 AAVRLDRAL-----LPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            E+   G+RVN +SP  + T   V A    E   ++     E  +++      + +L G+
Sbjct: 168 KEVAPKGVRVNTVSPGWIETEAAV-ALA--ERLAEAAGTDYEGAKQII-----MDSLGGI 219

Query: 244 TL----KARDIAEAALYLASDESKYISGHNLVVDGG 275
            L    +  ++AE   +LASD +  I+G   V+DGG
Sbjct: 220 PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  103 bits (260), Expect = 3e-26
 Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 47/288 (16%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+A++TGG   +G A  +   + GAKV I D +     A+   + ++      +  D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAG-----------VLGNQSKHKSITDFDANEFD 121
           V  ++ ++      +   G  DIL N AG                   K+  D D   F+
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 122 NIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP----HAYTVSKHAIVG 177
            +  +N+ G  L  +  AK MV R+ G II+ +S    M    P     AY+ +K AI  
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS----MNAFTPLTKVPAYSAAKAAISN 183

Query: 178 LTKNTACELGKYGIRVNCISP-FGVAT---SMLVNAWKSCEDCMDSGKPCEEEEEKMEEL 233
            T+  A    K GIRVN I+P F +     ++L N         + G   E         
Sbjct: 184 FTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFN---------EDGSLTE--------- 225

Query: 234 VRGLANLKGVTL----KARDIAEAALYLASDE-SKYISGHNLVVDGGF 276
            R    L    +    K  ++    L+LA ++ S +++G  L VDGGF
Sbjct: 226 -RANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272

Length = 278

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  101 bits (254), Expect = 1e-25
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTY-LHCD 72
             ++A+V GG + +GE       + G  V +ADI+      +AD + +      Y    D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            + EQ +  L         R+D+L  +AG+    +K   ITDF+  +FD  +++N+ G  
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGI----AKSAKITDFELGDFDRSLQVNLVGYF 116

Query: 133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  +  +K+M+     G II   S +  +G      Y+ +K   VGLT++ A +L ++GI
Sbjct: 117 LCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGI 176

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDS-----GKPCEEEEEKMEELVRGLANLK-GVTL 245
            VN +        ML N  KS      S      K    +E ++E+       LK G   
Sbjct: 177 TVNSL--------MLGNLLKS--PMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDY 226

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
           +  D+    L+ AS ++ Y +G ++ + GG
Sbjct: 227 Q--DVLNMLLFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  101 bits (253), Expect = 1e-25
 Identities = 76/283 (26%), Positives = 115/283 (40%), Gaps = 58/283 (20%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI---ADIDDAAGIALADSLLSSSP-LV 66
            T   K+A++TGGAR IG A  R     G +V I       +A   ALA  L +  P   
Sbjct: 2   MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEAD--ALAAELNALRPGSA 59

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             L  D+     +  L+   ++  GRLD L NNA           +      ++D++   
Sbjct: 60  AALQADLLDPDALPELVAACVAAFGRLDALVNNASSF----YPTPLGSITEAQWDDLFAS 115

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA---------YTVSKHAIVG 177
           N++ A   +  AA   + ++ G I++   +         HA         Y  +K A+  
Sbjct: 116 NLK-APFFLSQAAAPQLRKQRGAIVNITDI---------HAERPLKGYPVYCAAKAALEM 165

Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL 237
           LT++ A EL    +RVN ++P G         W           P  E+    +E  R  
Sbjct: 166 LTRSLALELAP-EVRVNAVAP-G------AILW-----------P--EDGNSFDEEAR-- 202

Query: 238 ANLKGVTLKAR-----DIAEAALYLASDESKYISGHNLVVDGG 275
             +   T   R     DIAEA  +L +D S +I+G  L VDGG
Sbjct: 203 QAILARTPLKRIGTPEDIAEAVRFLLADAS-FITGQILAVDGG 244

Length = 249

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  101 bits (253), Expect = 1e-25
 Identities = 84/274 (30%), Positives = 117/274 (42%), Gaps = 41/274 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             GK A+VTG  +GIG ATV+   K GA+VV      +   A  DSL+   P +  +  D
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAV----SRTQADLDSLVRECPGIEPVCVD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S     +      +   G +D+L NNA V   Q       +     FD    +NVR   
Sbjct: 61  LSDWDATEE----ALGSVGPVDLLVNNAAVAILQP----FLEVTKEAFDRSFDVNVRAVI 112

Query: 133 LGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ M+ R   G I++ +S AS         Y  +K A+  LTK  A ELG + I
Sbjct: 113 HVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKI 172

Query: 192 RVNCISPFGVATSMLVNAW------KSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           RVN ++P  V T M  + W      K   + +  GK  E E                   
Sbjct: 173 RVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVE------------------- 213

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
              D+  A L+L SD+S   +G  L VDGGF  S
Sbjct: 214 ---DVVNAILFLLSDKSSMTTGSTLPVDGGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  101 bits (253), Expect = 2e-25
 Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 33/271 (12%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-----ALADSLLSSSPLV 66
           +LEGK+A+VTG   G+G+       + G  +V  +I +         AL    LS     
Sbjct: 7   SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLS----- 61

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             L  D+     I  L+   +++ G +DIL NNAG++    + +   +F   ++D+++ +
Sbjct: 62  --LTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI----RREDAIEFSEKDWDDVMNL 115

Query: 127 NVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           N++      + AAK  + +   G II+ AS+ S  GG+   +YT SK  ++G+T+  A E
Sbjct: 116 NIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANE 175

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
             K+ I VN I+P  +AT+             ++ +   +E+   E L R  A   G+  
Sbjct: 176 WAKHNINVNAIAPGYMATN-------------NTQQLRADEQRSAEILDRIPAGRWGL-- 220

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGF 276
              D+    ++LAS  S YI+G+ + VDGG+
Sbjct: 221 -PSDLMGPVVFLASSASDYINGYTIAVDGGW 250

Length = 253

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  100 bits (251), Expect = 3e-25
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADID----DAAGIALADSLLSSSPLVTYLH 70
           GK  ++TGG+ GIG+A  +  VK GA V+I        + A   +     +S   V+Y+ 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S  ++++      + K G  D++ N AG+    S      D  A EF+  + +N  G
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGI----SIPGLFEDLTAEEFERGMDVNYFG 116

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           +         +M  +R G I+  +S A+L+G  G  AY  SK A+ GL ++   EL  Y 
Sbjct: 117 SLNVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYN 176

Query: 191 IRVNCISPFGVATSMLVN 208
           IRV+ + P    T     
Sbjct: 177 IRVSVVYPPDTDTPGFEE 194

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  100 bits (251), Expect = 3e-25
 Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 6/194 (3%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+G++ +VTGGA G+G A V  FV  GA+V + D   AAG+   ++    +  V  +  D
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD-KSAAGLQELEAAHGDA--VVGVEGD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE-FDNIIRINVRGA 131
           V    D +  +   ++  G++D L  NAG+    +    I D   +E FD +  INV+G 
Sbjct: 60  VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L +K A   +V  R   I + ++      G GP  YT +KHA+VGL K  A EL  Y +
Sbjct: 120 LLAVKAALPALVASRGSVIFTISNAGFYPNGGGP-LYTAAKHAVVGLVKELAFELAPY-V 177

Query: 192 RVNCISPFGVATSM 205
           RVN ++P G+++ +
Sbjct: 178 RVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  103 bits (260), Expect = 5e-25
 Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 7/195 (3%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
               GK+ +VTG   GIG  T   F + GA+VV +DID+AA    A+ L+ ++  V + +
Sbjct: 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAE-LIRAAGAVAHAY 369

Query: 71  -CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DVS    ++       ++HG  DI+ NNAG+           D  A ++D ++ +N+ 
Sbjct: 370 RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI----GMAGGFLDTSAEDWDRVLDVNLW 425

Query: 130 GAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           G   G +   + MV R   G I++ AS A+        AY  SK A++ L++    EL  
Sbjct: 426 GVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAA 485

Query: 189 YGIRVNCISPFGVAT 203
            GI V  I P  V T
Sbjct: 486 AGIGVTAICPGFVDT 500

Length = 582

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 99.6 bits (249), Expect = 6e-25
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 11/193 (5%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+ ++TG + GIG A        G +V IA   +   +     LL+ +  +  L  DV+ 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRV-IATARNPDKLESLGELLNDN--LEVLELDVTD 57

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E+ I+  +   I + GR+D+L NNAG          + +    E   +  +NV G     
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGY----GLFGPLEETSIEEVRELFEVNVFGPLRVT 113

Query: 136 KYAAKVMVPRRSGCIISTASVASLMG--GLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           +    +M  + SG I++ +SVA L+    LGP  Y  SK A+  L+++   EL  +GI+V
Sbjct: 114 RAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGP--YCASKAALEALSESLRLELAPFGIKV 171

Query: 194 NCISPFGVATSML 206
             I P  V T   
Sbjct: 172 TIIEPGPVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 36/276 (13%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSL 75
           +AIVTG +RGIG A        G  + I D+ DD     +   +L++     Y   D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             D + L++      GRLD L NNAG+         + D   + FD +I IN+RG     
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGI--AVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 136 KYAAKVMV------PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           +  A+ MV            II   S+ + +       Y +SK  +   T+  A  L   
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADE 180

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR- 248
           GI V+ I P  + T M                     +EK +EL+       G+    R 
Sbjct: 181 GIAVHEIRPGLIHTDMTAPV-----------------KEKYDELIA-----AGLVPIRRW 218

Query: 249 ----DIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
               DIA+A   LAS    Y +G  + +DGG +  +
Sbjct: 219 GQPEDIAKAVRTLASGLLPYSTGQPINIDGGLSMRR 254

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 98.4 bits (245), Expect = 2e-24
 Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 25/246 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+A+VTG + GIGEAT R     GA V IA        ALAD L +       L  D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEFDNIIRINVRG 130
           V+ EQ +   +  T+   GRLDIL NNAG+  LG       + D D  ++  +I  N+ G
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLG------PVEDADTTDWTRMIDTNLLG 114

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                  A    + R  G I++ +SVA  +       Y  +K  +   ++    E+ + G
Sbjct: 115 LMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERG 174

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           +RV  I P  V T +                      ++  E    ++ ++   L+A DI
Sbjct: 175 VRVVVIEPGTVDTEL-------------RDHITHTITKEAYE--ERISTIR--KLQAEDI 217

Query: 251 AEAALY 256
           A A  Y
Sbjct: 218 AAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 97.1 bits (242), Expect = 5e-24
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 25/262 (9%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADI--DDAAGIALADSLLSSSPLVTYLHCDV 73
           +IA+VTGG  GIG A  +   K G +V  A+   ++    A      +       +  DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVA-ANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           S  +  +  +    ++ G +D+L NNAG+  + +  K        ++  +I  N+     
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKK----MTYEQWSAVIDTNLNSVFN 115

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
             +     M  R  G II+ +SV    G  G   Y+ +K  ++G TK  A E    G+ V
Sbjct: 116 VTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTV 175

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           N ISP  +AT M++   +   + + +  P           V  L        +  +IA A
Sbjct: 176 NTISPGYIATDMVMAMREDVLNSIVAQIP-----------VGRLG-------RPEEIAAA 217

Query: 254 ALYLASDESKYISGHNLVVDGG 275
             +LAS+E+ YI+G  L ++GG
Sbjct: 218 VAFLASEEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.3 bits (243), Expect = 5e-24
 Identities = 69/277 (24%), Positives = 107/277 (38%), Gaps = 36/277 (12%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP-LVTYLHCDVS 74
            +A+VTGG RGIG    R     G  + I D  D   +A     L +    V +   DV+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
                + +++   +  GR+D L NNAGV         + D     FD ++ IN+RG    
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGV--GVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 135 MKYAAKVMV------PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            +  AK M+            I+  +SV ++M       Y +SK  +    +  A  L +
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            GI V  + P  + T M                       K + L+       G+    R
Sbjct: 181 EGIGVYEVRPGLIKTDMTAPV-----------------TAKYDALIAK-----GLVPMPR 218

Query: 249 -----DIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
                D+A A   LAS +  Y +G  + VDGG +  +
Sbjct: 219 WGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSIPR 255

Length = 256

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 96.8 bits (241), Expect = 7e-24
 Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 53/279 (18%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHG-------------AKVVIADIDDAAGIALADSLLSS 62
           K+ ++TG +RGIG AT  L    G             A+     +  A G A        
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACV------ 56

Query: 63  SPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                 +  DV+ E D+  + +   S  GRLD L NNAG++        + D DA     
Sbjct: 57  ------VAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP---LADMDAARLRR 107

Query: 123 IIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGLGPHA---YTVSKHAIV 176
           +   NV GA L  + AA+ +   R    G I++ +S+AS +G   P+    Y  SK A+ 
Sbjct: 108 MFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG--SPNEYVDYAGSKGAVD 165

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
            LT   A ELG +G+RVN + P  + T +  +           G+P      +   L  G
Sbjct: 166 TLTLGLAKELGPHGVRVNAVRPGLIETEIHASG----------GQP-----GRAARL--G 208

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                G   +A ++AE  ++L SD + Y++G  L V GG
Sbjct: 209 AQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 34/209 (16%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
             K+A+VTG + GIG AT     + G +V         G +   +  +  P V  L  DV
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF--------GTSRNPARAAPIPGVELLELDV 54

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITD----FDANEFDNIIR-IN 127
           + +  +Q  ++  I++ GR+D+L NNAGV L   ++  SI      FD N F  I+R   
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVF-GILRMTR 113

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASV-----ASLMGGLGPHAYTVSKHAIVGLTKNT 182
              A L        M  + SG II+ +SV     A  M       Y  SKHA+ G +++ 
Sbjct: 114 ---AVL------PHMRAQGSGRIINISSVLGFLPAPYMA-----LYAASKHAVEGYSESL 159

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWK 211
             E+ ++GIRV+ + P    T+   NA +
Sbjct: 160 DHEVRQFGIRVSLVEPAYTKTNFDANAPE 188

Length = 270

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 97.0 bits (242), Expect = 1e-23
 Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K   GK+A++TG A G G A  R+    G K+V+AD+   A       L +    V  + 
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVR 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS    ++ L +  + + G + +LFNNAGV         + +    +++ ++ +N+ G
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG----GLVWENSLADWEWVLGVNLWG 117

Query: 131 AALGMKYAAKVMV------PRRSGCIISTASVASLMGGLGPHA---YTVSKHAIVGLTKN 181
              G++    +M+      P   G I++TAS+A   G L P A   Y VSKHA+V LT+ 
Sbjct: 118 VIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA---GLLAPPAMGIYNVSKHAVVSLTET 174

Query: 182 TACELGKYGIRVNC--ISPFGVAT 203
              +L     +V    + P+ V T
Sbjct: 175 LYQDLSLVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.1 bits (248), Expect = 1e-23
 Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L GK+A+VTG ARGIG A   +  + GA VV  D+  AAG ALA   +++    T L 
Sbjct: 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDV-PAAGEALAA--VANRVGGTALA 262

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D++       +      +HG LDI+ +NAG+    ++ K++ + D   +D+++ +N+  
Sbjct: 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGI----TRDKTLANMDEARWDSVLAVNLL- 317

Query: 131 AALGMK---YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           A L +     AA  +     G I+  +S++ + G  G   Y  SK  ++GL +  A  L 
Sbjct: 318 APLRITEALLAAGAL--GDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLA 375

Query: 188 KYGIRVNCISPFGVATSM 205
           + GI +N ++P  + T M
Sbjct: 376 ERGITINAVAPGFIETQM 393

Length = 450

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 30/262 (11%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            +A+VTG A+ IG A        G +VV+  +  +A    L D L +       +  D+S
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
                 +L+       GR D+L NNA           +     + +  +  IN++   L 
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFYPT----PLGQGSEDAWAELFGINLKAPYLL 116

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGIRV 193
           ++  A+ +   R+G II+    A     L  + AY +SK A+ GLT++ A EL    IRV
Sbjct: 117 IQAFARRLAGSRNGSIINI-IDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IRV 174

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           N I+P      +L           D      E   +   L             A +IA+A
Sbjct: 175 NGIAP---GLILLP---------EDMDAEYRENALRKVPL--------KRRPSAEEIADA 214

Query: 254 ALYLASDESKYISGHNLVVDGG 275
            ++L    S YI+G  + VDGG
Sbjct: 215 VIFLLD--SNYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 94.8 bits (236), Expect = 3e-23
 Identities = 73/266 (27%), Positives = 110/266 (41%), Gaps = 40/266 (15%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           GK  +V GG+RGIG A VR FV  GA V        AG   A   L+     T +  D +
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFT----YAGSKDAAERLAQETGATAVQTDSA 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
              D   +I+  + K G LDIL  NAG+           + DA++ D + +IN+      
Sbjct: 62  ---DRDAVID-VVRKSGALDILVVNAGIAVFGDAL----ELDADDIDRLFKINIHAP--- 110

Query: 135 MKYAAKVMVPRR---SGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             Y A V   R+    G II   SV    M   G  AY  SK A+ G+ +  A + G  G
Sbjct: 111 --YHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRG 168

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           I +N + P  + T                          M++++     +K    +  ++
Sbjct: 169 ITINVVQPGPIDTDA------------------NPANGPMKDMMHSFMAIKR-HGRPEEV 209

Query: 251 AEAALYLASDESKYISGHNLVVDGGF 276
           A    +LA  E+ +++G    +DG F
Sbjct: 210 AGMVAWLAGPEASFVTGAMHTIDGAF 235

Length = 237

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 95.0 bits (236), Expect = 4e-23
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 24/263 (9%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           G++A+VTG ARGIG       +  G +VV+AD+D   G  +A +L  ++  +     DV+
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAM---DVA 66

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E  +   +   + + GRLD L  NA +      + ++       ++ ++ +N+ G  L 
Sbjct: 67  DEAQVAAGVAEVLGQFGRLDALVCNAAIA--DPHNTTLESLSLAHWNRVLAVNLTGPMLL 124

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            K+ A  +     G I++ AS  +        AY  SK  ++ LT   A  LG   IRVN
Sbjct: 125 AKHCAPYLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVN 182

Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
            +SP           W      +D+  P +   E + E      +  G      D+A   
Sbjct: 183 AVSP----------GW------IDARDPSQRRAEPLSEADHA-QHPAGRVGTVEDVAAMV 225

Query: 255 LYLASDESKYISGHNLVVDGGFT 277
            +L S ++ +++G   VVDGG T
Sbjct: 226 AWLLSRQAGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 94.5 bits (235), Expect = 4e-23
 Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 29/254 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHC 71
             G++A+VTG + GIG A  R  V+HG KVV          ALA    S+  P +    C
Sbjct: 4   WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+S E+ I ++ +   ++H  +D+  NNAG+     + + +       +  +  +NV   
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGLA----RPEPLLSGKTEGWKEMFDVNVLAL 119

Query: 132 ALGMKYAAKVMVPRR--SGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACEL- 186
           ++  + A + M  R    G II+  S++          H Y  +KHA+  LT+    EL 
Sbjct: 120 SICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELR 179

Query: 187 -GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
             K  IR   ISP  V T                 K  + + EK       +       L
Sbjct: 180 EAKTHIRATSISPGLVETEFAF-------------KLHDNDPEKAAATYESIP-----CL 221

Query: 246 KARDIAEAALYLAS 259
           K  D+A A LY+ S
Sbjct: 222 KPEDVANAVLYVLS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 94.5 bits (235), Expect = 4e-23
 Identities = 76/277 (27%), Positives = 119/277 (42%), Gaps = 49/277 (17%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKV-------------VIADIDDAAGIALADSLLSS 62
            IA+VTGG+RGIG AT  L  + G  V             V+  I  A G A        
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV------ 55

Query: 63  SPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                 L  D+S E  +  +          L  L NNAG+L  Q    ++ +  A   + 
Sbjct: 56  ------LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQC---TVENLTAERINR 106

Query: 123 IIRINVRGAALGMKYAAKVMVPR---RSGCIISTASVASLMGGLGPHA-YTVSKHAIVGL 178
           ++  NV G  L  + A K M  +     G I++ +S AS +G  G +  Y  SK AI  L
Sbjct: 107 VLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTL 166

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           T   + E+   GIRVNC+ P  + T M              G+P      +++ +   + 
Sbjct: 167 TTGLSLEVAAQGIRVNCVRPGFIYTEMHA----------SGGEP-----GRVDRVKSNIP 211

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             +G      ++A+A ++L SD++ Y++G  + + GG
Sbjct: 212 MQRGGQ--PEEVAQAIVWLLSDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 93.9 bits (234), Expect = 1e-22
 Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 27/270 (10%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
            GK+ +VTG A+GIG          GA+VV+ D  +     +A  L ++      L  D+
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVH-EVAAELRAAGGEALALTADL 65

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
                 Q  +   +   GR+D+L NN   +G     K   +++  + +  IR ++     
Sbjct: 66  ETYAGAQAAMAAAVEAFGRIDVLINN---VGGTIWAKPFEEYEEEQIEAEIRRSLFPTLW 122

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
             +     M+ +  G I++ +S+A+   G+    Y+ +K  +  LT + A E  ++GIRV
Sbjct: 123 CCRAVLPHMLAQGGGAIVNVSSIAT--RGINRVPYSAAKGGVNALTASLAFEYAEHGIRV 180

Query: 194 NCISPFGV-ATSMLV--NAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR-- 248
           N ++P G  A    V  NA              E+E+   +++V         +L  R  
Sbjct: 181 NAVAPGGTEAPPRRVPRNA----------APQSEQEKAWYQQIVD---QTLDSSLMKRYG 227

Query: 249 ---DIAEAALYLASDESKYISGHNLVVDGG 275
              +   A L+LASDE+ YI+G  L V GG
Sbjct: 228 TIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 92.8 bits (231), Expect = 1e-22
 Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 8/191 (4%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+A+VTG +RGIG    R   + G +V +             +L +S   V  +  D   
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLG----LRNPEDLAALSASGGDVEAVPYDARD 56

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
            +D + L++    + GR+D+L +NAG+        ++ +    E +    INV   A   
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGR----PTTLREGSDAELEAHFSINVIAPAELT 112

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +     +    SG ++   S++      G   Y+ SK A+  L      E   +G+RV+ 
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSA 172

Query: 196 ISPFGVATSML 206
           + P  V T M 
Sbjct: 173 VCPGFVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 93.0 bits (231), Expect = 2e-22
 Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           ++A+VTG   GIG A  R   K G +V +    +         L  +        CDV  
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRS 63

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             +I+ L+   ++++G +D+L NNAG  G      +  +     + +++  N+ G     
Sbjct: 64  VPEIEALVAAAVARYGPIDVLVNNAGRSGG----GATAELADELWLDVVETNLTGVFRVT 119

Query: 136 K--YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           K    A  M+ R +G II+ AS     G +    Y+ SKH +VG TK    EL + GI V
Sbjct: 120 KEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 179

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           N + P  V T M  +  +   D  +     EE  +++   V       G  +   ++A  
Sbjct: 180 NAVCPGFVETPMAASVREHYADIWEVST--EEAFDRITARVP-----LGRYVTPEEVAGM 232

Query: 254 ALYLASDESKYISGHNLVVDGG 275
             YL  D +  ++   L V GG
Sbjct: 233 VAYLIGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 92.0 bits (229), Expect = 3e-22
 Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 4/188 (2%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
            ++TG + GIG A  R F K G  V +A         L   LL+ +P V     DV+ E+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
             Q +I    ++ G LD++  NAGV     K  S+ D     F   I  N+ GAA  ++ 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGV----GKGTSLGDLSFKAFRETIDTNLLGAAAILEA 116

Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
           A      +  G ++  +SVA+L G  G  AY+ SK A+  L ++   ++ K GIRV  I+
Sbjct: 117 ALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVIN 176

Query: 198 PFGVATSM 205
           P  + T +
Sbjct: 177 PGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 92.1 bits (229), Expect = 5e-22
 Identities = 78/276 (28%), Positives = 110/276 (39%), Gaps = 48/276 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAGIALADSL 59
           L+ K+ +VTG  RGIG A      K G+ VV+               + +  G  +    
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--- 60

Query: 60  LSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                    +  DVS  +  + L   TI ++G  DIL NNAG LG  S      + D   
Sbjct: 61  ---------VLADVSTREGCETLAKATIDRYGVADILVNNAG-LGLFS---PFLNVDDKL 107

Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
            D  I  + +      +  AK M  R  G I++ ASVA +    G   Y   K A++ LT
Sbjct: 108 IDKHISTDFKSVIYCSQELAKEM--REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLT 165

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           K  A EL    IRVN I+P  V T +        E         E+E  +   L+     
Sbjct: 166 KYLALELAPK-IRVNAIAPGFVKTKL-------GESLFKVLGMSEKEFAEKFTLM----- 212

Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             G  L   ++AE    +   ES  I+G   V+D G
Sbjct: 213 --GKILDPEEVAEFVAAILKIES--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 92.2 bits (229), Expect = 6e-22
 Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 21/266 (7%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL--VTYL 69
           + + +  +VTGG  GIG+      V  GA V+I   +     A A+ + +      V Y 
Sbjct: 4   SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+ E  +   ++   + HGRL  + + AG  G+++    IT  D++ +   + +NV 
Sbjct: 64  PADVTDEDQVARAVDAATAWHGRLHGVVHCAG--GSETI-GPITQIDSDAWRRTVDLNVN 120

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    +K+AA+ +V    G  +  +S+A+        AY V+K A+  L K  A ELG  
Sbjct: 121 GTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPS 180

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            +RVN I P G+  + LV       +     + C             L  +  V     D
Sbjct: 181 WVRVNSIRP-GLIRTDLVAPITESPELSADYRACTP-----------LPRVGEVE----D 224

Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           +A  A++L SD + +I+G  + VDGG
Sbjct: 225 VANLAMFLLSDAASWITGQVINVDGG 250

Length = 276

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 90.9 bits (226), Expect = 8e-22
 Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 42/268 (15%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV-IA--DIDDAAGIALADSLLSSSPLVTYL 69
           +  +  +VTG  +GIG A        G +V+ IA   IDD  G   A             
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFA------------- 47

Query: 70  HCDVS-LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
            CD++ +EQ    L    I++   +D + NN G+   Q     +   D     ++  +NV
Sbjct: 48  -CDLADIEQTAATLAQ--INEIHPVDAIVNNVGIALPQP----LGKIDLAALQDVYDLNV 100

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           R A    +   + M  R  G I++  S A   G L   +Y+ +K A+VG T+  A EL +
Sbjct: 101 RAAVQVTQAFLEGMKLREQGRIVNICSRAIF-GALDRTSYSAAKSALVGCTRTWALELAE 159

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL-KA 247
           YGI VN ++P  + T +               +P   EEEK     R LA++    L   
Sbjct: 160 YGITVNAVAPGPIETELF-----------RQTRPVGSEEEK-----RVLASIPMRRLGTP 203

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGG 275
            ++A A  +L SD++ +I+G  L VDGG
Sbjct: 204 EEVAAAIAFLLSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 90.9 bits (226), Expect = 9e-22
 Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 5/178 (2%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP-LVTYLHCDVSL 75
           +A V G   G+G A  R F   G  V +A   +A   AL   ++  +      +  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E ++  L ++   + G L++L  NAG   N      I +     F+ +  +   G  L  
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG--ANVWF--PILETTPRVFEKVWEMAAFGGFLAA 116

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           + AAK M+ R  G II T + ASL G  G  A+  +K A+  L ++ A ELG  GI V
Sbjct: 117 REAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 8/191 (4%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           K+A+VTG  RGIG   VR   K G   V++   D   G A  + L +    V +   DV+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            +  I+   +    K+G LDIL NNAG+        + T   A E    ++ N  G    
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARE---TMKTNFFGTVDV 117

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            +    ++    +G I++   V+S +G L   AY VSK A+  LT+  A EL + GI+VN
Sbjct: 118 TQALLPLLKKSPAGRIVN---VSSGLGSLTS-AYGVSKAALNALTRILAKELKETGIKVN 173

Query: 195 CISPFGVATSM 205
              P  V T M
Sbjct: 174 ACCPGWVKTDM 184

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.4 bits (227), Expect = 2e-21
 Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 13/194 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHC 71
           L GK+A+VTG A G+G A      + GA VV+ D+  A     + D + ++      +  
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+S       L+   +   G LDI+ NNAG+     + + + +    E+D +I +++RG 
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGIT----RDRMLFNMSDEEWDAVIAVHLRGH 124

Query: 132 ALGMKYAAKVMVPRRS-------GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
            L  + AA     +         G I++T+S A L+G +G   Y  +K  I  LT + A 
Sbjct: 125 FLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAAR 184

Query: 185 ELGKYGIRVNCISP 198
            LG+YG+R N I P
Sbjct: 185 ALGRYGVRANAICP 198

Length = 306

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 90.6 bits (225), Expect = 2e-21
 Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 30/213 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKV-------------VIADIDDAAGIALADSL 59
           L GKIA+VTG +RGIG        + GA V                +I+   G  +    
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIP--- 57

Query: 60  LSSSPLVTYLHCDVSLEQDIQNLI-NVTISKHGRLDILFNNA--GV-LGNQSKHKSITDF 115
                    + CD S + +++ L   V   + GRLDIL NNA   V L      K   + 
Sbjct: 58  ---------VRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEE 108

Query: 116 DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI 175
               +D+I  + +R       YAA +MV    G I+  +S   L       AY V K AI
Sbjct: 109 PPTIWDDINNVGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNV-AYGVGKAAI 167

Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVN 208
             +  + A EL  +G+ V  + P  V T +++ 
Sbjct: 168 DRMAADMAHELKPHGVAVVSLWPGFVRTELVLE 200

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 90.0 bits (223), Expect = 2e-21
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 25/263 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+ A+VTG + GIGE   RL    GA V +         ALA  L      V     +
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPAN 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S   +++ L     +    +DIL NNAG+    +K          ++D+++ +N+    
Sbjct: 61  LSDRDEVKALGQKAEADLEGVDILVNNAGI----TKDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M+ RR G II+  SV  + G  G   Y  SK  ++G +K+ A E+    + 
Sbjct: 117 RLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVT 176

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VNC++P  + ++M             +GK      +K +E + G   +K +   A ++A 
Sbjct: 177 VNCVAPGFIESAM-------------TGK----LNDKQKEAIMGAIPMKRMGTGA-EVAS 218

Query: 253 AALYLASDESKYISGHNLVVDGG 275
           A  YLAS E+ Y++G  + V+GG
Sbjct: 219 AVAYLASSEAAYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 89.0 bits (221), Expect = 4e-21
 Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 9/189 (4%)

Query: 20  VTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDI 79
           +TG A GIG  T  LF ++G  V + DID+    ALA  L + + +   L  DV+     
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGAL--DVTDRAAW 62

Query: 80  QN-LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
              L +   +  GRLD LFNNAGV     +     D      D ++ INV+G   G  YA
Sbjct: 63  AAALADFAAATGGRLDALFNNAGVG----RGGPFEDVPLAAHDRMVDINVKGVLNGA-YA 117

Query: 139 AKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
           A   +    G  +I+TAS +++ G      Y+ +K A+ GLT+    E  ++GIRV  + 
Sbjct: 118 ALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVW 177

Query: 198 PFGVATSML 206
           P+ V T +L
Sbjct: 178 PWFVDTPIL 186

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.0 bits (221), Expect = 5e-21
 Identities = 75/279 (26%), Positives = 107/279 (38%), Gaps = 42/279 (15%)

Query: 13  LEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVI-----------ADIDDAAGIALADSL 59
           L  KIA+VTG +R  GIG A  R     G  +               + D   + L + +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 60  LSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
            S      ++  D+S       +      + G   IL NNA      S H  + +  A +
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAY----STHTRLEELTAEQ 118

Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
            D    +NVR   L     AK    +  G II+  S  SL       AY  +K AI   T
Sbjct: 119 LDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFT 178

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           K+ A EL + GI VN ++P    T      W      +         EE    LV     
Sbjct: 179 KSLAPELAEKGITVNAVNPGPTDT-----GW------IT--------EELKHHLVPKFPQ 219

Query: 240 LKGVTLK--ARDIAEAALYLASDESKYISGHNLVVDGGF 276
            +       AR IA    +L S+E+K+I+G  +  +GGF
Sbjct: 220 GRVGEPVDAARLIA----FLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 7e-21
 Identities = 83/279 (29%), Positives = 121/279 (43%), Gaps = 38/279 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL--H 70
           LEG++A+VTGG+ GIG ATV L ++ GA V I   D+    +    L    P    L   
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE-----FDNIIR 125
           CDV  E D+        ++ G +D+L NNAG  G  S     TD    +     + ++I 
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAG-QGRVSTFADTTDDAWRDELELKYFSVIN 124

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV----SKHAIVGLTKN 181
              R A L +         R S    S   V SL+  L P  + V    ++  ++ L K+
Sbjct: 125 -PTR-AFLPLL--------RASA-AASIVCVNSLL-ALQPEPHMVATSAARAGLLNLVKS 172

Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK 241
            A EL   G+RVN I   G+  S     W+   +         +  +  E     LA  K
Sbjct: 173 LATELAPKGVRVNSIL-LGLVES---GQWRRRYEAR------ADPGQSWEAWTAALARKK 222

Query: 242 GVTL----KARDIAEAALYLASDESKYISGHNLVVDGGF 276
           G+ L    +  + A A  +LAS  S Y +G ++ V GGF
Sbjct: 223 GIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 88.0 bits (219), Expect = 9e-21
 Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 23/258 (8%)

Query: 22  GGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQN 81
                I  A  +   + GA+VV+     A  +   D L    P    +  DV+ ++DI  
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELP-ADVIPLDVTSDEDIDE 61

Query: 82  LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV 141
           L        G++D L ++  +     K K   D     F   + I+        K A  +
Sbjct: 62  LFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPL 121

Query: 142 MVPRRSGCIISTASVAS--LMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPF 199
           M     G I++ + +A+  +  G G     V+K A+  L +  A ELG+ GIRVN IS  
Sbjct: 122 MNE--GGSIVALSYIAAERVFPGYG--GMGVAKAALESLARYLAYELGRKGIRVNTISAG 177

Query: 200 GVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLAS 259
              T+    A                  +KM E    +A L G    A ++A AA +L S
Sbjct: 178 PTKTT----AGSGIGG-----------FDKMVEYAEEMAPL-GRNASAEEVANAAAFLLS 221

Query: 260 DESKYISGHNLVVDGGFT 277
           D ++ I+G  L VDGGF+
Sbjct: 222 DLARGITGQILYVDGGFS 239

Length = 239

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 77/284 (27%), Positives = 119/284 (41%), Gaps = 48/284 (16%)

Query: 11  KTLEGKIAIVTGGAR--GIGEATVRLFVKHGA-----------KVVIADIDDAAGIALAD 57
             L+ K+A+VTG +R  GIG A  +   + GA           K +   +D    I L +
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 58  SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDF-- 115
            LL +   V+ +  D++     + L+N    + G   IL NNA        + +  DF  
Sbjct: 62  ELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAA-------YSTNNDFSN 114

Query: 116 -DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA 174
             A E D    +NVR   L     A+    +  G II+  S       +G  AY  +K A
Sbjct: 115 LTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGA 174

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV 234
           I  LT + A E+   GI VN I+P    T      W +                  EE+ 
Sbjct: 175 IDALTSSLAAEVAHLGITVNAINPGPTDT-----GWMT------------------EEIK 211

Query: 235 RGLANL--KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
           +GL  +   G   + +D A    +LAS+E+++I+G  +  +GGF
Sbjct: 212 QGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 56/270 (20%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV-----------IADIDDAAGIALADSLLS 61
           L+ +I +VTG   GIG      + +HGA V+           + D  +AAG         
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG--------- 60

Query: 62  SSPLVTYLHCDVS--LEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDAN 118
             P    +  D+     Q+ Q L + TI +  GRLD + +NAG+LG       +   D  
Sbjct: 61  -GPQPAIIPLDLLTATPQNYQQLAD-TIEEQFGRLDGVLHNAGLLGELG---PMEQQDPE 115

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
            + +++++NV    +  +    +++   +  ++ T+S     G     AY VSK A  G+
Sbjct: 116 VWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGM 175

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
            +  A E     +RVNCI+P G  T+M  +A+   ED                       
Sbjct: 176 MQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG-EDPQ--------------------- 213

Query: 239 NLKGVTLK-ARDIAEAALYLASDESKYISG 267
                 LK   DI    LYL  D+S+  +G
Sbjct: 214 -----KLKTPEDIMPLYLYLMGDDSRRKNG 238

Length = 247

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 87.7 bits (218), Expect = 2e-20
 Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 22/212 (10%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLHCD 72
           GK+ ++TG   GIG+ T R   K GA V+IA  ++  G   A  +   +    V  +  D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S    ++      +++  RLDIL NNAG++      + +T    + F+    +N  G  
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPP---RRLT---KDGFELQFAVNYLGHF 114

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMG-------------GLGPH-AYTVSKHAIVGL 178
           L       V+       I++ +S+A   G                P+ AY  SK A +  
Sbjct: 115 LLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILF 174

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAW 210
           T+  A  L   G+ VN + P  V T +L    
Sbjct: 175 TRELARRLEGTGVTVNALHPGVVRTELLRRNG 206

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 86.6 bits (215), Expect = 4e-20
 Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 24/246 (9%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTY-LHCDVS 74
           K  ++TG + GIGEAT R F K GAK+++          LAD L +  P+    L  DVS
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
             + I+  +     +   +DIL NNAG  LG         + D  +++ +I  NV+G   
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQ----EADLEDWETMIDTNVKGLLN 116

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
             +    +M+ R  G II+  S+A      G + Y  +K A+   + N   +L   GIRV
Sbjct: 117 VTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRV 176

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
             I P  V T   +  +               ++EK +++  G+       L   DIAE 
Sbjct: 177 TNIEPGLVETEFSLVRFHG-------------DKEKADKVYEGV-----EPLTPEDIAET 218

Query: 254 ALYLAS 259
            L++AS
Sbjct: 219 ILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 85.1 bits (211), Expect = 1e-19
 Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 6/187 (3%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD 78
           ++TG + GIG AT   F + GAKVV+A     A   LA  +         +  DV+    
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQ 63

Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
           ++   +  + + GR+D   NNAGV    +      D    EF  +  +N  G   G   A
Sbjct: 64  VERAADTAVERFGRIDTWVNNAGV----AVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAA 119

Query: 139 AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG--IRVNCI 196
              +  R  G +I+  S+          AY+ SKHA+ G T++   EL   G  I V  +
Sbjct: 120 LPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLV 179

Query: 197 SPFGVAT 203
            P  + T
Sbjct: 180 QPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 1e-19
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           +L GK+ +VTG ARGIG    R     GAK+ + D+++A   ALA  L      V  +  
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD-RVLTVVA 64

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+    +Q      + + G +D++  NAG+    +   S+   D + F  +I +N+ G 
Sbjct: 65  DVTDLAAMQAAAEEAVERFGGIDVVVANAGI----ASGGSVAQVDPDAFRRVIDVNLLGV 120

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              ++ A    +  R G ++  +S+A+     G  AY  SK  +         E+  +G+
Sbjct: 121 FHTVR-ATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGV 179

Query: 192 RV 193
            V
Sbjct: 180 TV 181

Length = 296

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 85.7 bits (212), Expect = 2e-19
 Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 51/284 (17%)

Query: 8   KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKV--------------VIADIDDAAGI 53
           K +  L+G+ A++TG   GIG AT   F + GA +              V+  I      
Sbjct: 48  KGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK 107

Query: 54  ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT 113
           A+A            L  D+  E   + L+   + + G LDIL N A   G Q+  K I 
Sbjct: 108 AVA------------LPGDLKDEAFCRQLVERAVKELGGLDILVNIA---GKQTAVKDIA 152

Query: 114 DFDANEFDNIIRINVRGAALGMKYAAKVMVP--RRSGCIISTASVASLMGGLGPHAYTVS 171
           D    +FD   + NV      M +  K  +P       II+T S+ S         Y  +
Sbjct: 153 DITTEQFDATFKTNV----YAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYAST 208

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME 231
           K AIV  TK  A ++ + GIRVN ++P  V T +  +           G+P     EK+ 
Sbjct: 209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG----------GQP----PEKIP 254

Query: 232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           +   G         +  ++A   + LAS ES Y++G    V GG
Sbjct: 255 DF--GSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 85.0 bits (210), Expect = 3e-19
 Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 13/202 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             G+ A++TGGA GIG AT   F + GA+VV+ D+D        + L +    V  + CD
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V   +++ +L +      G +D++F+NAG++        I +   +++  +I +++ G+ 
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIV----VGGPIVEMTHDDWRWVIDVDLWGSI 119

Query: 133 LGMKYAAKVMVPR-----RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
               +  +  +PR       G ++ TAS A L+   G  AY V+K+ +VGL +  A E+ 
Sbjct: 120 ----HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT 175

Query: 188 KYGIRVNCISPFGVATSMLVNA 209
             GI V+ + P  V T+++ N+
Sbjct: 176 ADGIGVSVLCPMVVETNLVANS 197

Length = 275

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 84.1 bits (208), Expect = 4e-19
 Identities = 65/292 (22%), Positives = 98/292 (33%), Gaps = 73/292 (25%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD 78
           ++TG A GIG AT  L    G  V+  D+ +A                  +  D+S  + 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREA-----------------DVIADLSTPEG 45

Query: 79  IQNLI-NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
               I +V     G LD L N AGV G                  ++++N  G    M+ 
Sbjct: 46  RAAAIADVLARCSGVLDGLVNCAGVGGTTVA------------GLVLKVNYFGLRALMEA 93

Query: 138 AAKVMVPRRSGCIISTASVASLMGG-----------------------LGPH----AYTV 170
               +        +  +S+A                                    AY  
Sbjct: 94  LLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAG 153

Query: 171 SKHAIVGLTKNTACE-LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK 229
           SK A+   T+  A   L   G+RVN ++P  V T +L                   ++ +
Sbjct: 154 SKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAF---------------LQDPR 198

Query: 230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
             E V       G   +  +IA    +LASD + +I+G NL VDGG   S  
Sbjct: 199 GGESVDAFVTPMGRRAEPDEIAPVIAFLASDAASWINGANLFVDGGLDASMR 250

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 83.4 bits (206), Expect = 5e-19
 Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 32/261 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD---SLLSSSPLVTYL 69
           L  +I +VTG + GIG      + ++GA V++   ++     +AD         P    L
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ Q L       + RLD + +NAG+LG+              + ++ ++NV 
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQV---WQDVXQVNVN 118

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              +  +    +++   +G ++ T+S     G     AY VSK A  GL +  A E  + 
Sbjct: 119 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQR 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            +RVNCI+P G  T+M  +A+           P E+ +            LK       D
Sbjct: 179 NLRVNCINPGGTRTAMRASAF-----------PTEDPQ-----------KLK----TPAD 212

Query: 250 IAEAALYLASDESKYISGHNL 270
           I    L+L  D+S+  +G   
Sbjct: 213 IMPLYLWLMGDDSRRKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 8e-19
 Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 16/200 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K +  ++ ++TG + G+G AT R F + GAKVV+    +    ALA  + ++      + 
Sbjct: 4   KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVV 63

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+  + +Q   +    + G +D   NNA V       + +T     EF  +  +   G
Sbjct: 64  ADVADAEAVQAAADRAEEELGPIDTWVNNAMV-TVFGPFEDVT---PEEFRRVTEVTYLG 119

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVAS-----LMGGLGPHAYTVSKHAIVGLTKNTACE 185
              G   A + M PR  G II   S  +     L       AY  +KHAI G T +  CE
Sbjct: 120 VVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQS-----AYCAAKHAIRGFTDSLRCE 174

Query: 186 L--GKYGIRVNCISPFGVAT 203
           L      + V  + P  V T
Sbjct: 175 LLHDGSPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 41/278 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA------------DIDDAAGIALADSLL 60
           L+GK+ +V+G   G+G        + GA VV+A            +IDD    ALA    
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALA---- 58

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
               + T    D++ E    NL+ + + + GR+D L NNA  + +    K + D D   +
Sbjct: 59  ----VPT----DITDEDQCANLVALALERFGRVDALVNNAFRVPSM---KPLADADFAHW 107

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
             +I +NV G  L +  A    +    G I+   S+          AY ++K A++  ++
Sbjct: 108 RAVIELNVLGT-LRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQ 166

Query: 181 NTACELGKYGIRVNCISP---FGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL 237
           + A ELG  GIRVN ++P   +G                   G      E+   E     
Sbjct: 167 SLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKY-----GVT---VEQIYAETAANS 218

Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             LK +     ++A A L+LASD ++ I+G  L V+ G
Sbjct: 219 D-LKRLPTDD-EVASAVLFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 61/234 (26%), Positives = 91/234 (38%), Gaps = 38/234 (16%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-------------------DIDDAA 51
            +L GK   +TG +RGIG A      + GA +VIA                   +I+ A 
Sbjct: 2   MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG 61

Query: 52  GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS 111
           G AL             L  DV  E  +   +   + + G +DI  NNA  +        
Sbjct: 62  GQALP------------LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAI----NLTG 105

Query: 112 ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-GLGPH-AYT 169
             D     FD + +INVRG  L  +     +    +  I++ +   +L      PH AYT
Sbjct: 106 TEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYT 165

Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISP-FGVATSMLVNAWKSCEDCMDSGKP 222
           ++K+ +   T   A E    GI VN + P   +AT+ + N     E    S  P
Sbjct: 166 MAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTP 219

Length = 273

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 10/193 (5%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
            ++TG +RGIG   VR  +  G   VIA   D +      +L +S   +  L  DV+ E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 78  D--IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
               + +          LD+L NNAG+L +       ++ D+ +   + ++NV G  L  
Sbjct: 61  AESAEAVAERL--GDAGLDVLINNAGILHSYGP---ASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 136 KYAAKVMVPRRSGCIIS-TASVASL--MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +    +++      II+ ++ V S+      G ++Y  SK A+  LTK+ A EL + GI 
Sbjct: 116 QAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 193 VNCISPFGVATSM 205
           V  + P  V T M
Sbjct: 176 VVSLHPGWVRTDM 188

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 76/271 (28%), Positives = 116/271 (42%), Gaps = 37/271 (13%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            K+ I+TGG+ G+G+A  + F + GA VVI              +      V  +  DV 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA--- 131
             +D+Q ++     K GR+D L NNA   GN        D   N ++++I I + G    
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAA--GNFICPAE--DLSVNGWNSVIDIVLNGTFYC 116

Query: 132 --ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG-K 188
             A+G  +  K       G II+  +  +   G G      +K  ++ +T+  A E G K
Sbjct: 117 SQAVGKYWIEK----GIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRK 172

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL--- 245
           YGIRVN I+P  +            E    + K  E EE            ++ V L   
Sbjct: 173 YGIRVNAIAPGPI------------ERTGGADKLWESEEAAK-------RTIQSVPLGRL 213

Query: 246 -KARDIAEAALYLASDESKYISGHNLVVDGG 275
               +IA  A +L SDE+ YI+G  + +DGG
Sbjct: 214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 78.0 bits (193), Expect = 5e-17
 Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 36/272 (13%)

Query: 15  GKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGI---ALADSLLSSSPLVTYL 69
           GK  ++TG A  R I     +   + GA++      +A       LA+ L  S+ +   L
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALV---L 57

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            CDVS +++I+ L        G+LD L ++              D     F   + I+  
Sbjct: 58  PCDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAY 117

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLM-----GGLGPHAYTVSKHAIVGLTKNTAC 184
                 K A  +M     G I++ + + S         +G     V+K A+    +  A 
Sbjct: 118 SLVSLAKAALPIM--NPGGSIVTLSYLGSERVVPGYNVMG-----VAKAALESSVRYLAY 170

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           ELG+ GIRVN IS   + T               SG    ++  +  E    L       
Sbjct: 171 ELGRKGIRVNAISAGPIKTL------------AASGITGFDKMLEYSEQRAPLGR----N 214

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGF 276
           + A ++   A +L SD S  I+G  + VDGG+
Sbjct: 215 VTAEEVGNTAAFLLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 10/193 (5%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
             A++TG + GIG+AT   F K G  + +      A  ALA  L S+         D+S 
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN 66

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
            + I   I   + + G  D+L NNAG+         + +   +++  +I++N+       
Sbjct: 67  PEAIAPGIAELLEQFGCPDVLINNAGMAYT----GPLLEMPLSDWQWVIQLNLTSV---F 119

Query: 136 KYAAKV---MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +  + V   M  R  G II+ +S+A+        AY VSK A+   TK  A E   +GIR
Sbjct: 120 QCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIR 179

Query: 193 VNCISPFGVATSM 205
           V  I+   V T +
Sbjct: 180 VCTITLGAVNTPL 192

Length = 241

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 5e-17
 Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 57/290 (19%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD 78
           +V  GA GIG+A  R  V  G KV++AD ++    A A +L  +   V+    DVS  + 
Sbjct: 5   VVVIGAGGIGQAIARR-VGAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63

Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
           ++ L   T    G +  L + AGV  +Q+             + I+++++ G AL ++  
Sbjct: 64  VKALAA-TAQTLGPVTGLVHTAGVSPSQAS-----------PEAILKVDLYGTALVLEEF 111

Query: 139 AKVMVPRRSGCIISTASVASLMGGLGP-----------------------------HAYT 169
            KV+ P  +G +I++ S    +  L                               HAY 
Sbjct: 112 GKVIAPGGAGVVIASQS-GHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQ 170

Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK 229
           ++K A        A + G+ G R+N ISP  ++T +  +                   + 
Sbjct: 171 IAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG------------PRGDG 218

Query: 230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
              +       +  T    +IA  A +L      +I+G + +VDGG T S
Sbjct: 219 YRNMFAKSPAGRPGT--PDEIAALAEFLMGPRGSFITGSDFLVDGGATAS 266

Length = 275

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 77.4 bits (191), Expect = 7e-17
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 9/193 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           ++ K  +VTG  RGIG+A V   + HGAK V A + D      A  +      V  L  D
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGS--AAHLVAKYGDKVVPLRLD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+  + I+        +   +D++ NNAGVL   +  +     +A + +  + +NV G  
Sbjct: 59  VTDPESIKAAAA----QAKDVDVVINNAGVLKPATLLEE-GALEALKQE--MDVNVFGLL 111

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +  A V+     G I++  SVASL        Y+ SK A   LT+    EL   G  
Sbjct: 112 RLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTL 171

Query: 193 VNCISPFGVATSM 205
           V  + P  + T M
Sbjct: 172 VLSVHPGPIDTRM 184

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 77.0 bits (189), Expect = 1e-16
 Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 49/283 (17%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKV-------------VIADIDDAAGIA-LA 56
           K L+GK+A+VTG +RGIG A        GA V              I +I+   G A L 
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 57  DSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD 116
           ++ L+S   V        L + ++N + + +     +DIL NNAG+ G Q   ++ T+  
Sbjct: 62  EADLNSIDGVK------KLVEQLKNELQIRVGT-SEIDILVNNAGI-GTQGTIENTTE-- 111

Query: 117 ANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV 176
              FD I+ +N++     ++    ++  R  G +I+ +S    +G  G  AY +SK A+ 
Sbjct: 112 -EIFDEIMAVNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALN 168

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
            +T   A  LG+ GI VN I P    T +             + K  ++ E      +R 
Sbjct: 169 TMTLPLAKHLGERGITVNTIMPGYTKTDI-------------NAKLLDDPE------IRN 209

Query: 237 LA---NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
            A   ++ G   +  DIA+A  +LAS +S++++G  + V GGF
Sbjct: 210 FATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 74/270 (27%), Positives = 110/270 (40%), Gaps = 34/270 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA--DIDDAAGIALADSLLSSSPLVTYLH 70
             GK  +V GG  GI     + F + GA V +A    +     A    L  + P    + 
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVD--AAVAQLQQAGPEGLGVS 64

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV     ++        + G +D+L   +G  GN           AN F  ++ I++ G
Sbjct: 65  ADVRDYAAVEAAFAQIADEFGPIDVLV--SGAAGNFP--APAAGMSANGFKTVVDIDLLG 120

Query: 131 AALGMKYAAKVMVPRRSGCIIS-TASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               +K A  ++  R    II  +A  A +   +  H    +K  +  LT+  A E G  
Sbjct: 121 TFNVLKAAYPLLR-RPGASIIQISAPQAFVPMPMQAHV-CAAKAGVDMLTRTLALEWGPE 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK--- 246
           GIRVN I P  +A +          + M    P  E +  +          + V LK   
Sbjct: 179 GIRVNSIVPGPIAGT----------EGMARLAPSPELQAAVA---------QSVPLKRNG 219

Query: 247 -ARDIAEAALYLASDESKYISGHNLVVDGG 275
             +DIA AAL+LASD + YI+G  L VDGG
Sbjct: 220 TKQDIANAALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 26/196 (13%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL----VTYLHC 71
           K+A+VTG + GIG+AT R     G  V  A          A  +     L    V  L  
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGA----------ARRVDKMEDLASLGVHPLSL 53

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+ E  I+  ++  I++ GR+D+L NNAG       + +I D   +E      +N+ GA
Sbjct: 54  DVTDEASIKAAVDTIIAEEGRIDVLVNNAGY----GSYGAIEDVPIDEARRQFEVNLFGA 109

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVA----SLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           A   +     M  +RSG II+ +S+     + +G      Y  +K A+ G +     E+ 
Sbjct: 110 ARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAW----YHATKFALEGFSDALRLEVA 165

Query: 188 KYGIRVNCISPFGVAT 203
            +GI V  I P G+ T
Sbjct: 166 PFGIDVVVIEPGGIKT 181

Length = 273

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 74.2 bits (182), Expect = 3e-16
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+AIVTGG  GIG  T  L  K GAKV++ DID  +G A  + + +      ++  D
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV 102
           +  + D Q +I++T++   R+D+LF NAG+
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 26/203 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G   ++TGG  GIG A  R F++ G  V+I    +              P +  +  D
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREER----LAEAKKELPNIHTIVLD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V   + ++ L    +S++  LDIL NNAG+          +D D    D  I  N+ G  
Sbjct: 59  VGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDK--ADTEIDTNLIGPI 116

Query: 133 LGMKYAAKVMVP----RRSGCIISTASVASLMGGLG--PHA----YTVSKHAIVGLTKNT 182
                  K  +P    +    I++ +S      GL   P A    Y  +K A+   T   
Sbjct: 117 ----RLIKAFLPHLKKQPEATIVNVSS------GLAFVPMAANPVYCATKAALHSYTLAL 166

Query: 183 ACELGKYGIRVNCISPFGVATSM 205
             +L   G+ V  I P  V T +
Sbjct: 167 RHQLKDTGVEVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 75.5 bits (186), Expect = 5e-16
 Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 37/281 (13%)

Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS----SP 64
           A  +L+GK+ ++ GGA+ +G    R     GAK V    + AA  A A+  +++      
Sbjct: 2   ADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA 61

Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITDFDANEFDNI 123
                  D++    ++ L +   +  GR DI  N  G VL      K I +    E+D +
Sbjct: 62  KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL-----KKPIVEISEAEYDEM 116

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKN 181
             +N + A   +K A + +        +    V SL+G   P   AY  SK  +   T+ 
Sbjct: 117 FAVNSKSAFFFIKEAGRHLNDNGKIVTL----VTSLLGAFTPFYSAYAGSKAPVEHFTRA 172

Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME----ELVRGL 237
            + E G  GI V  + P  + T                     E  E +           
Sbjct: 173 ASKEFGARGISVTAVGPGPMDTPFFYPQ---------------EGAEAVAYHKTAAALSP 217

Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
            +  G+T    DI     +L +D   +I+G  ++++GG+TT
Sbjct: 218 FSKTGLT-DIEDIVPFIRFLVTD-GWWITGQTILINGGYTT 256

Length = 257

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 75.3 bits (185), Expect = 6e-16
 Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 44/283 (15%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYL-HCDVS 74
            A+VTG A+ IG +      + G +VV+      AA   LA  L +  P        D+S
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 75  LEQDI----QNLINVTISKHGRLDILFNNA----------GVLGNQSKHKSITDFDANEF 120
               +    + +I+      GR D+L NNA          G  G     K   +    E 
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAE- 121

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------LGPHAYTVSKHA 174
             +   N       +K  A+     R+    +  S+ +L         LG   YT++KHA
Sbjct: 122 --LFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHA 179

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV 234
           + GLT++ A EL    IRVN ++P     S+L +A            P E +E+   ++ 
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAP---GLSLLPDA-----------MPFEVQEDYRRKVP 225

Query: 235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            G          A  IA+  ++L S ++KYI+G  + VDGG +
Sbjct: 226 LGQRE-----ASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 74.9 bits (184), Expect = 6e-16
 Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 33/263 (12%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQ 77
           +VTG +RGIG A        G ++ +      +   ++  ++ +       L  DV+   
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
             + L+   I++HG    +  NAG+    ++  +       ++D +I  N+ G    +  
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGI----TRDAAFPALSEEDWDIVIHTNLDGFYNVIHP 117

Query: 138 AAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
               M+  R+ G II+ ASV+ +MG  G   Y+ +K  ++G TK  A EL K  I VNCI
Sbjct: 118 CTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCI 177

Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL----KARDIAE 252
           +P  + T ML                  E E  ++E       LK V +    +  ++A 
Sbjct: 178 APGLIDTEML-----------------AEVEHDLDE------ALKTVPMNRMGQPAEVAS 214

Query: 253 AALYLASDESKYISGHNLVVDGG 275
            A +L SD + Y++   + V+GG
Sbjct: 215 LAGFLMSDGASYVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 75/275 (27%), Positives = 112/275 (40%), Gaps = 37/275 (13%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLH 70
            L GK  ++TG ++GIG A    F   G  + +   D  A  ALA  L ++  + V    
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S  +  + L     ++ G +DIL NNAG +        + D D   +     + V G
Sbjct: 64  LDLSSPEAREQL----AAEAGDIDILVNNAGAI----PGGGLDDVDDAAWRAGWELKVFG 115

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTA-----C 184
                + A   M  R SG I++         G  P A Y      I G   N A      
Sbjct: 116 YIDLTRLAYPRMKARGSGVIVNVIG----AAGENPDADY------ICGSAGNAALMAFTR 165

Query: 185 ELGKY----GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL 240
            LG      G+RV  ++P  VAT  ++   K         +    +E + +EL+ GL   
Sbjct: 166 ALGGKSLDDGVRVVGVNPGPVATDRMLTLLKG------RARAELGDESRWQELLAGLP-- 217

Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            G      ++A+   +LAS  S Y SG  + VDGG
Sbjct: 218 LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252

Length = 259

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 10/195 (5%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL--ADSLLSSSPLVTYLHCDV 73
           K   VTG A GIG AT       GA++ + D  DA G+A   AD+      +  +   D+
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDR-DADGLAQTVADARALGGTVPEHRALDI 59

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           S    +        + HG +D++ N AG+    S   ++      ++  ++ +N+ G   
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGI----SAWGTVDRLTHEQWRRMVDVNLMGPIH 115

Query: 134 GMK-YAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
            ++ +   ++   R G +++ +S A L+  L  H AY+ SK  + GL++    +L ++GI
Sbjct: 116 VIETFVPPMVAAGRGGHLVNVSSAAGLV-ALPWHAAYSASKFGLRGLSEVLRFDLARHGI 174

Query: 192 RVNCISPFGVATSML 206
            V+ + P  V T ++
Sbjct: 175 GVSVVVPGAVKTPLV 189

Length = 272

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 13/190 (6%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIA--DIDDAAGIALADSLLSSSPLVTYLHC 71
             KIAIVTG + G G  T     K G  V+    + +    +    + L+    +     
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITDFDANEFDNIIRINVRG 130
           DV+ +  I N   + + + GR+D+L NNAG   G   +   + ++   +F+     NV G
Sbjct: 62  DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYR-KQFE----TNVFG 115

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMG--GLGPHAYTVSKHAIVGLTKNTACELGK 188
           A    +     M  ++SG II+ +S++  +G  GL P  Y  SK+A+ G +++   EL  
Sbjct: 116 AISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSP--YVSSKYALEGFSESLRLELKP 173

Query: 189 YGIRVNCISP 198
           +GI V  I P
Sbjct: 174 FGIDVALIEP 183

Length = 280

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 73.0 bits (180), Expect = 3e-15
 Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 8/194 (4%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT-YLHCDV 73
           G  A+VTG   GIG+A      K G  V++         A+A  +     + T  +  D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 74  SLEQDIQNLINVTISKHGRLDI--LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           S   DI   I   +     LDI  L NN G+  +  ++    +   +E  +II +NV   
Sbjct: 61  SAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYF--LETPEDELQDIINVNVMAT 115

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +     MV R+ G I++ +S A L+       Y+ SK  +   ++    E    GI
Sbjct: 116 LKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGI 175

Query: 192 RVNCISPFGVATSM 205
            V  + P+ VAT M
Sbjct: 176 DVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 66/265 (24%), Positives = 110/265 (41%), Gaps = 36/265 (13%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVI---ADIDDAAGIALADSLLSSSPLVTYLHCD 72
           + A+VTG AR IG A       HG  V +      D+A   ALA  + +       L  D
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAE--ALAAEIRALGRRAVALQAD 67

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ E +++ L+    +  G + +L NNA +     ++ S   F    +D  +  N+R   
Sbjct: 68  LADEAEVRALVARASAALGPITLLVNNASLF----EYDSAASFTRASWDRHMATNLRAPF 123

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYG 190
           +  +  A+ +     G +++   +   +  L P   +YT+SK A+   T+  A  L    
Sbjct: 124 VLAQAFARALPADARGLVVNM--IDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR- 180

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN I P G                + SG+   E+  +           +G T +  +I
Sbjct: 181 IRVNAIGP-GPT--------------LPSGRQSPEDFARQ---HAATPLGRGSTPE--EI 220

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A A  YL    S  ++G  + VDGG
Sbjct: 221 AAAVRYLLDAPS--VTGQMIAVDGG 243

Length = 258

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 72.5 bits (178), Expect = 6e-15
 Identities = 76/283 (26%), Positives = 120/283 (42%), Gaps = 48/283 (16%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHG-------------AKVVIADIDDAAGIALADSL 59
           ++GK  +++GG RGIG+A V  F + G             A  +  D++   GI      
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 60  LSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNA-----GVLGNQSKHKSITD 114
           L+     TY      +++D             R+D   +NA      V+G  +K   +  
Sbjct: 66  LNILEPETYKELFKKIDEDFD-----------RVDFFISNAIISGRAVVGGYTKFMRLKP 114

Query: 115 FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA 174
              N   NI    V    +G + AAK M     G IIS +S  +L+       +  SK A
Sbjct: 115 KGLN---NIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAA 171

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV 234
           +  + K  A ELG+  IRVN +S   + T    +A K+  +          EE K +   
Sbjct: 172 VETMVKYAATELGEKNIRVNAVSGGPIDT----DALKAFTN---------YEEVKAKTEE 218

Query: 235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               N  G   +  D+A A L+L S+++ +++G  +VVDGG T
Sbjct: 219 LSPLNRMG---QPEDLAGACLFLCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 71.5 bits (176), Expect = 9e-15
 Identities = 59/258 (22%), Positives = 95/258 (36%), Gaps = 33/258 (12%)

Query: 19  IVTGGARGIGEATVRLFVK--HGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE 76
           I+TG +RGIG A     +K    + VV+    +     L + L      VT +  D+S  
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLR-VTTVKADLSDA 61

Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA----A 132
             ++ L+       G  D+L NNAG LG       I   D +E      +N+       +
Sbjct: 62  AGVEQLLEAIRKLDGERDLLINNAGSLG---PVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             ++   K  + +    +++ +S A++    G   Y  SK A     +  A E     +R
Sbjct: 119 TLLRAFKKRGLKKT---VVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVR 173

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKARDI 250
           V   +P  V T M     ++  D                E      +LK  G  L     
Sbjct: 174 VLSYAPGVVDTDMQREIRETSAD---------------PETRSRFRSLKEKGELLDPEQS 218

Query: 251 AEAALYLASDESKYISGH 268
           AE    L  ++ K+ SG 
Sbjct: 219 AEKLANLL-EKDKFESGA 235

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 70.8 bits (173), Expect = 4e-14
 Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 36/279 (12%)

Query: 7   KKAYK---TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI----ADIDDAAGI-ALADS 58
           +K Y     L+ + A+VTGG  GIG A    + + GA V I     + +DA  +  + + 
Sbjct: 38  EKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE 97

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
               + L   L  D+S E+  ++L++      G LDI+   A V G Q     I D  + 
Sbjct: 98  CGRKAVL---LPGDLSDEKFARSLVHEAHKALGGLDIM---ALVAGKQVAIPDIADLTSE 151

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA--YTVSKHAIV 176
           +F     INV  A   +   A  ++P+ +  II+T+S+ +      PH   Y  +K AI+
Sbjct: 152 QFQKTFAINVF-ALFWLTQEAIPLLPKGAS-IITTSSIQAYQP--SPHLLDYAATKAAIL 207

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
             ++  A ++ + GIRVN ++P  + T++ ++           G+     ++K+ +  + 
Sbjct: 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG----------GQT----QDKIPQFGQQ 253

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
              +K     A ++A   +YLAS ES Y++     V GG
Sbjct: 254 TP-MKRAGQPA-ELAPVYVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 7e-14
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 12/201 (5%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            L GK+ ++TG + GIG AT     + GA V +   +  A   L   + +         C
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTC 427

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD-FD-ANEFDNIIRINVR 129
           D++    + + +   +++HG +D L NNAG    +S  +S+ +  D  ++++  + +N  
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYLVNNAG----RSIRRSVENSTDRFHDYERTMAVNYF 483

Query: 130 GAA---LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           GA    LG+      M  RR G +++ +S+          AY  SK A+   +   A E 
Sbjct: 484 GAVRLILGL---LPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASET 540

Query: 187 GKYGIRVNCISPFGVATSMLV 207
              GI    I    V T M+ 
Sbjct: 541 LSDGITFTTIHMPLVRTPMIA 561

Length = 657

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 68.8 bits (169), Expect = 9e-14
 Identities = 55/194 (28%), Positives = 77/194 (39%), Gaps = 15/194 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           ++GK+ +VTG  RGIG A V   +  GA  V A   D   +          P V  L  D
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLG------PRVVPLQLD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +             + IL NNAG+    S    + + D +     +  N  G  
Sbjct: 58  VTDPASVAAAAEAA----SDVTILVNNAGIFRTGS---LLLEGDEDALRAEMETNYFG-P 109

Query: 133 LGMKYA-AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L M  A A V+     G I++  SV S +       Y+ SK A   LT+    EL   G 
Sbjct: 110 LAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGT 169

Query: 192 RVNCISPFGVATSM 205
           RV  + P  + T M
Sbjct: 170 RVLGVHPGPIDTDM 183

Length = 238

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 68.2 bits (166), Expect = 2e-13
 Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 43/277 (15%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-------------DIDDAAGIALA-DS 58
           L+GK+A+VTG +RGIG A  +     GA V I              +I    G A +  +
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
            L S   V  L+   SL+ ++QN    T     + DIL NNAG+       ++   F   
Sbjct: 62  NLESLHGVEALYS--SLDNELQNRTGST-----KFDILINNAGIGPGAFIEETTEQF--- 111

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
            FD ++ +N +     ++ A   +  R +  II+ +S A+ +      AY+++K AI  +
Sbjct: 112 -FDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTM 168

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           T   A +LG  GI VN I P  + T M  NA    +  M           ++ E+     
Sbjct: 169 TFTLAKQLGARGITVNAILPGFIKTDM--NAELLSDPMMKQYATTISAFNRLGEV----- 221

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                     DIA+ A +LAS +S++++G  + V GG
Sbjct: 222 ---------EDIADTAAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 19/204 (9%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
            L GK  ++TG + GIGEA    F + GA VV     +    A+AD +  +      + C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN---- 127
           D+S    +  L+     + G +DIL NNAG    +   +S+  +  ++ +  + +N    
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRW--HDVERTMVLNYYAP 154

Query: 128 ---VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNT 182
              +RG A G       M+ R  G II+ A+   ++    P    Y  SK A+  +++  
Sbjct: 155 LRLIRGLAPG-------MLERGDGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRVI 206

Query: 183 ACELGKYGIRVNCISPFGVATSML 206
             E G  G+    +    VAT M+
Sbjct: 207 ETEWGDRGVHSTTLYYPLVATPMI 230

Length = 293

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 3e-13
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G + ++TG + GIG+AT   F + GA++V+A  D+ A  A+A+   +    V  +  D
Sbjct: 5   LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEFDNIIRINVRG 130
           V+    ++ L     S  GR+D+  NN GV  +G   +    T  +A+E   +I+ N+ G
Sbjct: 65  VTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEE----TPIEAHE--QVIQTNLIG 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY- 189
                  A  +   +  G  I+  S+          AY+ SK  + G ++    EL  + 
Sbjct: 119 YMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHP 178

Query: 190 GIRVNCISPFGVAT 203
            I V  + P  + T
Sbjct: 179 DIHVCDVYPAFMDT 192

Length = 330

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 67.6 bits (165), Expect = 4e-13
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 13/264 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L GK+A  T  ++GIG    R+  + GA V++   ++       + + S S + V+Y+  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D++  +D++  +   +   G  DI F + G      K     +    +++  +++ +  A
Sbjct: 66  DLTKREDLERTVK-ELKNIGEPDIFFFSTG----GPKPGYFMEMSMEDWEGAVKLLLYPA 120

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +     M  +  G II + SVA            V + ++ GL +  A ELG  GI
Sbjct: 121 VYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGI 180

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
            VN I P  + T  ++   +  +     GK     EE ++E  + +    G   +  +I 
Sbjct: 181 TVNGIMPGIIRTDRVIQLAQ--DRAKREGKSV---EEALQEYAKPIP--LGRLGEPEEIG 233

Query: 252 EAALYLASDESKYISGHNLVVDGG 275
               +LASD   YI+G  + VDGG
Sbjct: 234 YLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 68/277 (24%), Positives = 105/277 (37%), Gaps = 80/277 (28%)

Query: 31  TVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH 90
           T RL    GA+V+  D     G+ L            ++  D+     I   +    +  
Sbjct: 1   TARLLRFLGARVIGVDRR-EPGMTLDG----------FIQADLGDPASIDAAVA---ALP 46

Query: 91  GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR--RSG 148
           GR+D LFN AGV G           +      + R+N     LG+++  + ++PR    G
Sbjct: 47  GRIDALFNIAGVPG-------TAPVEL-----VARVNF----LGLRHLTEALLPRMAPGG 90

Query: 149 CIISTASVA------------SLMGGLG---------------PHAYTVSKHAIVGLTKN 181
            I++ AS+A            +L                       Y +SK A++  T  
Sbjct: 91  AIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150

Query: 182 TACE-LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM--EELVRGLA 238
            A    G  GIRVNC++P  V T +L                   +   M  +E V   A
Sbjct: 151 QAQPWFGARGIRVNCVAPGPVFTPIL------------------GDFRSMLGQERVDSDA 192

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
              G    A + A   ++L SD +++I+G NL VDGG
Sbjct: 193 KRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 19/195 (9%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA----DSLLSSSPLVTYLH 70
            K+  +TG +RG G A     ++ G +VV    D A    LA    D LL        L 
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLP-------LA 55

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAG--VLGNQSKHKSITDFDANEFDNIIRINV 128
            DV+    +   +   +   GRLDI+ NNAG  + G       I +   +E    I  N 
Sbjct: 56  LDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFG------MIEEVTESEARAQIDTNF 109

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            GA    +     +  +RSG II  +S+  +        Y  SK A+ G+++  A E+ +
Sbjct: 110 FGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAE 169

Query: 189 YGIRVNCISPFGVAT 203
           +GI+V  + P G +T
Sbjct: 170 FGIKVTLVEPGGYST 184

Length = 275

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 24/216 (11%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKV--VIADIDD---------AAGIALADSLLSSSP 64
            + ++TG + GIG           +K   V A + D         AAG     +L     
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTL----- 55

Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
               L  DV   + +   +         +D+L  NAGV G     +++++   +   ++ 
Sbjct: 56  --ETLQLDVCDSKSVAAAVERV--TERHVDVLVCNAGV-GLLGPLEALSE---DAMASVF 107

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
            +NV G    ++     M  R SG I+ T+SV  L G      Y  SK A+ GL ++ A 
Sbjct: 108 DVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAV 167

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSG 220
           +L  + + ++ I    V T+ +     S E+ +D  
Sbjct: 168 QLLPFNVHLSLIECGPVHTAFMEKVLGSPEEVLDRT 203

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 63.2 bits (154), Expect = 8e-12
 Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 37/207 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-------------------DIDDAAGI 53
           L GK   +TG +RGIG+A      + GA VVIA                   +I+ A G 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 54  ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT 113
           AL                D+  E  ++  +   + K G +DIL NNA  +          
Sbjct: 61  ALP------------CIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAI----SLTGTL 104

Query: 114 DFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-LGPH-AYTVS 171
           D     +D ++ +N RG  L  K     +   ++  I++ +   +L       H AYT++
Sbjct: 105 DTPMKRYDLMMGVNTRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMA 164

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISP 198
           K+ +       A E    GI VN + P
Sbjct: 165 KYGMSMCVLGMAEEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 12/96 (12%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           G++A+VTG   G+G  T       GA VV+A  +   G A A  + +++P       DV+
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-----GADVT 70

Query: 75  LEQ-DIQNLINVTI------SKHGRLDILFNNAGVL 103
           L++ D+ +L +V        + + R+D+L NNAGV+
Sbjct: 71  LQELDLTSLASVRAAADALRAAYPRIDLLINNAGVM 106

Length = 306

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 5e-11
 Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K  ++TG + GIG+A        GA++++   +     ALA  L         +  D
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRW-VVAD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ E   + ++     + G +++L NNAGV    +    + D D    + ++ +N+    
Sbjct: 62  LTSEAGREAVLAR-AREMGGINVLINNAGV----NHFALLEDQDPEAIERLLALNLTAPM 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +    ++  + S  +++  S    +G  G  +Y  SK A+ G ++    EL   G+R
Sbjct: 117 QLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVR 176

Query: 193 VNCISPFGVATSM 205
           V  ++P    T+M
Sbjct: 177 VLYLAPRATRTAM 189

Length = 263

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 70/283 (24%), Positives = 108/283 (38%), Gaps = 51/283 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           LEGK  ++ G A  R I     +   + GA++      +        LA+ L   S LV 
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL--GSDLV- 60

Query: 68  YLHCDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
            L CDV+ ++ I  L   TI K  G+LD L ++      +       D     F   + I
Sbjct: 61  -LPCDVTNDESIDALFA-TIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDI 118

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGL 178
           +        K A  +M     G I++   + S        +MG        V+K A+   
Sbjct: 119 SAYSFTALAKAARPLM--NNGGSILTLTYLGSERVVPNYNVMG--------VAKAALEAS 168

Query: 179 TKNTACELGKYGIRVNCISPFGVAT---SMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
            +  A +LGK GIRVN IS   + T   S + +                    KM +   
Sbjct: 169 VRYLAADLGKEGIRVNAISAGPIRTLAASGIGDF------------------RKMLKENE 210

Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
             A L+   +   ++   A +L SD S  I+G  + VD G+  
Sbjct: 211 ANAPLR-RNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHI 252

Length = 259

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 60.9 bits (148), Expect = 7e-11
 Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 8/183 (4%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE 76
           I +VTG   G GE   R F++ G KV+           L D L  +   +     DV   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN---LYIAQLDVRNR 58

Query: 77  QDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             I+ ++    ++   +D+L NNAG+ LG +  HK+  +    +++ +I  N +G     
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVE----DWETMIDTNNKGLVYMT 114

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +     MV R  G II+  S A      G + Y  +K  +   + N   +L    +RV  
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174

Query: 196 ISP 198
           I P
Sbjct: 175 IEP 177

Length = 248

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 7e-11
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 13/188 (6%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
             K  ++TG + G G A  +  +  G +VV     +AA        L     +  L  DV
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--LHPDRALARL-LDV 59

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR---INVRG 130
           +    I  ++    +  G +D+L NNAG       H+     + +    + R   +NV G
Sbjct: 60  TDFDAIDAVVADAEATFGPIDVLVNNAGY-----GHEGA--IEESPLAEMRRQFEVNVFG 112

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A    K     M  RR G I++  S+  L+   G   Y  SK A+ G++++ A E+  +G
Sbjct: 113 AVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFG 172

Query: 191 IRVNCISP 198
           I V  + P
Sbjct: 173 IHVTAVEP 180

Length = 277

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 21/212 (9%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIA---DIDDAAGIALADSLLSSSPLVTYLHCD 72
            + ++TG + GIG A    F K     V A     +D   +A A          T +  D
Sbjct: 2   PVVLITGCSSGIGRALADAF-KAAGYEVWATARKAEDVEALAAAG--------FTAVQLD 52

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAG--VLGNQSKHKSITDFDANEFDNIIRINVRG 130
           V+    +  L     ++HG LD+L NNAG   +G       + D            NV  
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAGYGAMG------PLLDGGVEAMRRQFETNVF- 105

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A +G+  A   ++ R  G +++  SV+ ++      AY  SK A+  L+     EL  +G
Sbjct: 106 AVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFG 165

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
           ++V  + P  +A+    NA +  E  +    P
Sbjct: 166 VQVMEVQPGAIASQFASNASREAEQLLAEQSP 197

Length = 274

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 19/187 (10%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            ++ +V GG   +G A V+ F   G  V  A ID A       S       +  L  D  
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWV--ASIDLAENEEADAS-------IIVLDSDSF 51

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVL-GNQSKHKSITDFDANEFDNIIRINVRGAAL 133
            EQ  + ++       G++D L   AG   G  +K KS        +D + + N+  + +
Sbjct: 52  TEQ-AKQVVASVARLSGKVDALICVAGGWAGGSAKSKS----FVKNWDLMWKQNLWTSFI 106

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG--KYGI 191
               A K +     G ++ T + A+L    G   Y  +K A+  LT++ A E      G 
Sbjct: 107 ASHLATKHL--LSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGS 164

Query: 192 RVNCISP 198
             N I P
Sbjct: 165 TANAILP 171

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 5e-10
 Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 28/248 (11%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
           A+V G + GIG AT       G  V +          L D + +          DV+   
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
            +++ +       G +++L + AG       H+  T+    +F++ ++I++ GA    + 
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTE----QFESQVQIHLVGA---NRL 125

Query: 138 AAKV---MVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYGIR 192
           A  V   M+ RR G +I   S  +L     PH  AY  +K  +  +  N   EL   G+R
Sbjct: 126 ATAVLPGMIERRRGDLIFVGSDVALRQR--PHMGAYGAAKAGLEAMVTNLQMELEGTGVR 183

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-GLANLKGVTLKARDIA 251
            + + P    T M    W           P E     +E+  + G A      L+A D+A
Sbjct: 184 ASIVHPGPTLTGM---GWSL---------PAEVIGPMLEDWAKWGQAR-HDYFLRASDLA 230

Query: 252 EAALYLAS 259
            A  ++A 
Sbjct: 231 RAITFVAE 238

Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK AIVTGG  G+G  T R   + GA V++     A    +A   L+    V  +  D
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVP----ARRPDVAREALAGIDGVEVVMLD 79

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVL 103
           ++  + ++      +    R+DIL NNAGV+
Sbjct: 80  LADLESVRAFAERFLDSGRRIDILINNAGVM 110

Length = 315

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 35/214 (16%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADID----DAAGIALADSLLSSSPLVTYLH 70
           GK  I+TG   GIG+ T R   + GA+V++A  D    + A   +    L+   +V   H
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVR--H 58

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD-----FDANEFDNIIR 125
            D++  + I+      +++  RLD+L NNAGV+  +  +    D     F  N   + + 
Sbjct: 59  LDLASLKSIRAFAAEFLAEEDRLDVLINNAGVM--RCPYSKTEDGFEMQFGVNHLGHFLL 116

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH------------AYTVSKH 173
            N+    L +    K   P R   I++ +S+A   G +               AY  SK 
Sbjct: 117 TNL---LLDL---LKKSAPSR---IVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKL 167

Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLV 207
           A V  T+  A  L   G+ VN + P GV  + L 
Sbjct: 168 ANVLFTRELARRLQGTGVTVNALHP-GVVRTELG 200

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 12/193 (6%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC---DV 73
              +TG + GIG+A  R + + GA + +     A       +  +  P    +     DV
Sbjct: 4   KVFITGASSGIGQALAREYARQGATLGLV----ARRTDALQAFAARLPKAARVSVYAADV 59

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANEFDNIIRINVRGAA 132
                +       I+ HG  D++  NAG+ +G  ++ +   D     F  ++  N  G  
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEERE--DLAV--FREVMDTNYFGMV 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M   R G ++  ASVA + G  G  AY+ SK A +   ++   EL   G+R
Sbjct: 116 ATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVR 175

Query: 193 VNCISPFGVATSM 205
           V  I+P  + T M
Sbjct: 176 VVTIAPGYIRTPM 188

Length = 257

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 18/163 (11%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKH-GAKVV------IADIDDAAGIALADSLLSSSPLV 66
            G + +VTGGA GIG A  R   +  GA++V      +   ++     LA +L +    V
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLA-ALEALGARV 262

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
            Y+  DV+    ++ L+     ++G +D + + AGVL    +   +    A +F+ ++  
Sbjct: 263 LYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL----RDALLAQKTAEDFEAVLAP 318

Query: 127 NVRG-AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY 168
            V G   L     A+ +        +  +SV++  GG G   Y
Sbjct: 319 KVDGLLNL-----AQALADEPLDFFVLFSSVSAFFGGAGQADY 356

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 54.6 bits (131), Expect = 8e-09
 Identities = 65/273 (23%), Positives = 104/273 (38%), Gaps = 45/273 (16%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIA------------DIDDAAGIALADSLLSSS 63
           +IA VTGG  GIG +  +   K G KVV              +   A G     S     
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIAS----- 58

Query: 64  PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
                   +V      +   +   ++ G +D+L NNAG+    ++          ++  +
Sbjct: 59  ------EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGI----TRDVVFRKMTREDWTAV 108

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           I  N+       K     MV R  G II+ +SV    G  G   Y+ +K  I G T + A
Sbjct: 109 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 168

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            E+   G+ VN +SP  + T M+        + + +  P           VR L      
Sbjct: 169 QEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP-----------VRRLG----- 212

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                +I     +LAS+ES + +G +  ++GG 
Sbjct: 213 --SPDEIGSIVAWLASEESGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 26/192 (13%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH---- 70
            K  ++TG   G G        + G  V+       AG+ +A       P VT L     
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVI-------AGVQIA-------PQVTALRAEAA 47

Query: 71  -CDVSLEQ---DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
              ++L     D+ + I+   +    +D+L NNAG+     +  ++ D        +   
Sbjct: 48  RRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGI----GEAGAVVDIPVELVRELFET 103

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           NV G     +   + MV R  G ++ T+S+A L+ G    AY  SKHA+  + +    EL
Sbjct: 104 NVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAEL 163

Query: 187 GKYGIRVNCISP 198
             +GI+V  ++P
Sbjct: 164 KPFGIQVATVNP 175

Length = 257

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 47/223 (21%), Positives = 76/223 (34%), Gaps = 50/223 (22%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
            +VTGG+ GIG A  R     G+  V                     LV           
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKV---------------------LVVS--------- 30

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
                         R D++ +NA +L +               +  IR NV G    ++ 
Sbjct: 31  --------------RRDVVVHNAAILDDGRLIDLTGS----RIERAIRANVVGTRRLLEA 72

Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
           A ++M  +R G  I  +SVA L G  G   Y  SK A+ GL +  A E    G+    ++
Sbjct: 73  ARELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVA 132

Query: 198 PFGVATSMLVNAWKSCEDCMDSGKPCEEE--EEKMEELVRGLA 238
               A S +     + E+ + + +        E++   +    
Sbjct: 133 CGTWAGSGMAKGPVAPEEILGNRRHGVRTMPPEEVARALLNAL 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 25/102 (24%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAGIALADS 58
            L GK A+VTG +RGIG  T ++    GA VV+             A+I+ A G A A  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA-- 60

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNA 100
                     +  D++ E+ +  L++    + G LD L  NA
Sbjct: 61  ----------VGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 52.5 bits (127), Expect = 2e-08
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 8/118 (6%)

Query: 19  IVTGGARGIGEATVRLFVKHGA-KVVIA---DIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           ++TGG  G+G A  R   + GA ++V+      D     AL   L ++   VT + CDV+
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDVA 63

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
               +  ++    +  G L  + + AGVL        +       F  ++     GA 
Sbjct: 64  DRDALAAVLAAIPAVEGPLTGVIHAAGVL----DDGVLASLTPERFAAVLAPKAAGAW 117

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 26/272 (9%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD 78
           +VT  +RGIG    R  +K GA+VVI+  ++   +  A   L     V  +  D+S + D
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEEN-LEKALKELKEYGEVYAVKADLSDKDD 62

Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
           ++NL+       G +D L  NAG +  +         +A   D +    +   A G  Y 
Sbjct: 63  LKNLVKEAWELLGGIDALVWNAGNVRCEPCMLH----EAGYSDWLEAALLHLVAPG--YL 116

Query: 139 AKVMVP-----RRSGCIISTASVASLMGGLGPHAYT-VSKHAIVGLTKNTACELGKYGIR 192
             +++      +  G ++  +SV S+   + P     V++  +V L K  +   G  GIR
Sbjct: 117 TTLLIQAWLEKKMKGVLVYLSSV-SVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIR 175

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL---ANLKGVTLKARD 249
                    A ++L+ ++ +     +  +  EE     EE              T +  +
Sbjct: 176 ---------AYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEE 226

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
           +     +L S+ ++Y+ G  +V DG  T   N
Sbjct: 227 LGSLIAFLLSENAEYMLGSTIVFDGAMTRGVN 258

Length = 259

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 52.6 bits (126), Expect = 4e-08
 Identities = 56/262 (21%), Positives = 92/262 (35%), Gaps = 22/262 (8%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE 76
           IA+VT      G A+     + G  VV  D   A       +  S +P    L      E
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQ-AFESENPGTKALS-----E 56

Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           Q  + L++  +   G +D+L +N  +    +     ++ D  +    + I     AL ++
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSI--FPFAL-LQ 113

Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
            A   M     G II   S            Y  ++ A V L ++ A EL +  I V  I
Sbjct: 114 AAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAI 173

Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALY 256
            P         N + S      +    E   E  E + R +    G   +  ++     +
Sbjct: 174 GP---------NFFNS-PTYFPT-SDWENNPELRERVKRDVP--LGRLGRPDEMGALVAF 220

Query: 257 LASDESKYISGHNLVVDGGFTT 278
           LAS  +  I+G      GG+  
Sbjct: 221 LASRRADPITGQFFAFAGGYLP 242

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 59/263 (22%), Positives = 94/263 (35%), Gaps = 43/263 (16%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD 78
           +V GG+ GIG A  R F   GA+V IA        A A +L   +P+ T    D++ E  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAA-LDITDEAA 59

Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
           +         + G  D +   A      +    +           +     GA    + A
Sbjct: 60  VDAFFA----EAGPFDHVVITAA----DTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-A 110

Query: 139 AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISP 198
           A++      G +   +  A++              A+  L +  A EL    +RVN +SP
Sbjct: 111 ARI---APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSP 165

Query: 199 FGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR------DIAE 252
             V T +    W                 +  E +    A      L AR      D+A 
Sbjct: 166 GLVDTPL----WSKLAG------------DAREAMFAAAAE----RLPARRVGQPEDVAN 205

Query: 253 AALYLASDESKYISGHNLVVDGG 275
           A L+LA   + + +G  ++VDGG
Sbjct: 206 AILFLA--ANGFTTGSTVLVDGG 226

Length = 230

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 8/196 (4%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           G  A+VTG   GIG+       + G  +V+   +      ++DS+ S           V 
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 75  LEQDI-QNLINVTISKHGRLD--ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
              DI + +  +  +  G LD  +L NN GV  +    +   + D     N+I++NV G 
Sbjct: 113 FSGDIDEGVKRIKETIEG-LDVGVLINNVGV--SYPYARFFHEVDEELLKNLIKVNVEGT 169

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACELGKY 189
               +     M+ R+ G II+  S A+++    P    Y  +K  I   ++    E  K 
Sbjct: 170 TKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKS 229

Query: 190 GIRVNCISPFGVATSM 205
           GI V C  P  VAT M
Sbjct: 230 GIDVQCQVPLYVATKM 245

Length = 320

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 72/290 (24%), Positives = 109/290 (37%), Gaps = 67/290 (23%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           LEGK  +V G A  R I     R     GAK+V     +        LAD+L     L+ 
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLL- 63

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLD-----ILFNNAGVLGNQSKHKSITDFDANEFDN 122
            L CDV+ +++I         + G +      I F N              +    EF  
Sbjct: 64  -LPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFAN-------------KEDLRGEFLE 109

Query: 123 IIR--------INVRGAALGMKYAAKVMVPRRSGCIISTASVA--------SLMGGLGPH 166
             R        I+        + A K+M     G I++   +         ++MG     
Sbjct: 110 TSRDGFLLAQNISAYSLTAVAREAKKLMT--EGGSIVTLTYLGGERVVQNYNVMG----- 162

Query: 167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE 226
              V+K ++    K  A +LGK GIRVN IS   + T   ++A K         K  EE 
Sbjct: 163 ---VAKASLEASVKYLANDLGKDGIRVNAISAGPIRT---LSA-KGVGGFNSILKEIEER 215

Query: 227 EEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                      A L+  T    ++ + A +L SD S+ ++G N+ VD G+
Sbjct: 216 -----------APLRR-TTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 57/215 (26%), Positives = 81/215 (37%), Gaps = 39/215 (18%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL--ADSLLSSSPLVTYLHCDVSLE 76
           ++TG + GIG    R     G +V  A       +A   A+ L            D +  
Sbjct: 8   LITGCSSGIGAYCARALQSDGWRV-FATCRKEEDVAALEAEGL-------EAFQLDYAEP 59

Query: 77  QDIQNLINVTISK-HGRLDILFNN-----AGVLGNQSKHKSITDFDANEF---DNIIRIN 127
           + I  L+   +    GRLD LFNN      G + +         F+AN F   D   R+ 
Sbjct: 60  ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV- 118

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH----AYTVSKHAIVGLTKNTA 183
                        VM  +  G I+  +S+     GL P     AY  SK AI GL+    
Sbjct: 119 -----------IPVMRKQGQGRIVQCSSIL----GLVPMKYRGAYNASKFAIEGLSLTLR 163

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMD 218
            EL   GI V+ I P  + T    NA  + +  +D
Sbjct: 164 MELQGSGIHVSLIEPGPIETRFRANALAAFKRWID 198

Length = 277

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 41/199 (20%), Positives = 70/199 (35%), Gaps = 46/199 (23%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
            IV G    IG A  +L   HG +V+ A                SS        D++ E 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAG--------------RSSGDY---QVDITDEA 43

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
            I+ L      K G  D + + AG     ++   + +    +F   +   + G    +++
Sbjct: 44  SIKAL----FEKVGHFDAIVSTAGD----AEFAPLAELTDADFQRGLNSKLLGQINLVRH 95

Query: 138 AAKVMVPRRSGCIIS---------TASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
               +    S  + S           + A+ + G           A+ G  +  A EL +
Sbjct: 96  GLPYLNDGGSITLTSGILAQRPIPGGAAAATVNG-----------ALEGFVRAAAIELPR 144

Query: 189 YGIRVNCISPFGVATSMLV 207
            GIR+N +SP  V  S+  
Sbjct: 145 -GIRINAVSPGVVEESLEA 162

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 50/204 (24%), Positives = 77/204 (37%), Gaps = 39/204 (19%)

Query: 16  KIAIVTGGARGIGEATVR-LFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
             A++TG +RGIG A  R L   H   +++          LA  L  ++P    L    +
Sbjct: 4   PTALITGASRGIGAAIARELAPTH--TLLLGGRPAERLDELAAELPGATPFPVDLTDPEA 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA-- 132
           +   ++ L        GRLD+L +NAGV    +    + +   +E+   + +NV   A  
Sbjct: 62  IAAAVEQL--------GRLDVLVHNAGV----ADLGPVAESTVDEWRATLEVNVVAPAEL 109

Query: 133 ----LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA----YTVSKHAIVGLTKN-TA 183
               L    AA        G ++   S A    GL  +     Y  SK A+  L      
Sbjct: 110 TRLLLPALRAAH-------GHVVFINSGA----GLRANPGWGSYAASKFALRALADALRE 158

Query: 184 CELGKYGIRVNCISPFGVATSMLV 207
            E G   +RV  + P    T M  
Sbjct: 159 EEPGN--VRVTSVHPGRTDTDMQR 180

Length = 227

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 12/154 (7%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVI----ADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           +VTGG  G+G    R   + GA+ ++    +   D    AL   L +    VT + CDVS
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
               ++ L+    +    L  + + AGVL +      + +  A +F  ++   V GA   
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRD----ALLANMTAEDFARVLAPKVTGAWNL 119

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY 168
            +        R     +  +S+A ++G  G   Y
Sbjct: 120 HEATR----DRPLDFFVLFSSIAGVLGSPGQANY 149

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 54/265 (20%), Positives = 104/265 (39%), Gaps = 35/265 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK   + G + G+G A     +K GA+V I   ++     +  +L S    + Y+  D
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL-SKYGNIHYVVGD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  +  +N+I         +D L    G       +   T  + +  + ++  +++   
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVG------GYVEDTVEEFSGLEEMLTNHIKIPL 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
             +  + + +  +    I+  +S++ +        +Y V+K  +    +  A EL   GI
Sbjct: 116 YAVNASLRFL--KEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGI 173

Query: 192 RVNCISPFGVATSMLVN-AWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           RVN I+P  ++        WK      D   P E                        D 
Sbjct: 174 RVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPE------------------------DF 209

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A+  ++L +DE+ ++ G  + VDGG
Sbjct: 210 AKVIIWLLTDEADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 23/190 (12%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIA--DIDDAAGIALADSLLSSSPLVTYLHCDV 73
           K  ++TG + GIG        + G +V+ A    DD A +    + L  + ++  L    
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSLGFTGILLDLDDPE 58

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGV-----LGNQSKHKSITDFDANEFDNIIRINV 128
           S+E+    +I +T     RL  LFNNAG      L   S+ +    F  N F        
Sbjct: 59  SVERAADEVIALT---DNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFF-------- 107

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            G           M+P   G I+ T+SV  L+   G  AY  SK+A+   +     EL  
Sbjct: 108 -GTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRH 166

Query: 189 YGIRVNCISP 198
            GI+V+ I P
Sbjct: 167 SGIKVSLIEP 176

Length = 256

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCD 72
           GK+ I+TG   GIG  T R F  HGA V++A  + +   A    +L       V  +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLG 104
           ++  + +Q       +K+  L +L  NA V  
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFA 92

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 69/278 (24%), Positives = 104/278 (37%), Gaps = 38/278 (13%)

Query: 12  TLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT-- 67
            L GK A+VTG A  R I     +     GA++ I  + D  G         + PL    
Sbjct: 3   DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSL 62

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
           +L CDV  +  I+        K G+LDIL +     G +      +      F   + I+
Sbjct: 63  FLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEIS 122

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGLT 179
               A   K A  +M     G I++   +          +MG        V+K A+    
Sbjct: 123 AYSLAPLCKAAKPLM--SEGGSIVTLTYLGGVRAIPNYNVMG--------VAKAALEASV 172

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           +  A ELG   IRVN IS    A  +   A  +    +D           M   V   A 
Sbjct: 173 RYLAAELGPKNIRVNAIS----AGPIRTLASSAVGGILD-----------MIHHVEEKAP 217

Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           L+  T+   ++   A +L SD +  I+G  + VD G+ 
Sbjct: 218 LRR-TVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC 254

Length = 258

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK A+VTG + G+G    R     GA+V++   + A G A   ++ ++ P        
Sbjct: 12  LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP-----DAK 66

Query: 73  VSLEQ-DIQNLINV-----TISKHGR-LDILFNNAGVL 103
           +SL   D+ +L +V      +   GR + +L NNAGV+
Sbjct: 67  LSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVM 104

Length = 313

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 22/200 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYL 69
            TL  K  +VTG ++G+GE   + +   GA V++          + D+++ +  P    +
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 70  HCDV-SLEQDIQNLINVTISK--HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             D+ S E+        TI++   G+LD + + AG     S    +      E+ N  RI
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALS---PLDFQTVAEWVNQYRI 118

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---GLGPHAY----TVSKHAIVGLT 179
           N   A +G+  A   ++ +        ASV   +G   G  P AY      SK A+  L 
Sbjct: 119 NTV-APMGLTRALFPLLKQS-----PDASVI-FVGESHGETPKAYWGGFGASKAALNYLC 171

Query: 180 KNTACELGKYG-IRVNCISP 198
           K  A E  ++G +R N + P
Sbjct: 172 KVAADEWERFGNLRANVLVP 191

Length = 239

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 24/168 (14%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K  ++ G +RGIG   VR +   G + VIA   DAA +A   +L + +  +     DV+ 
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAALAALQALGAEALAL-----DVAD 55

Query: 76  EQDIQNLINVTISKHG--RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
              +  L      K     LD     AGV G ++  + +      +FD ++  NV G   
Sbjct: 56  PASVAGL----AWKLDGEALDAAVYVAGVYGPRT--EGVEPITREDFDAVMHTNVLGPMQ 109

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA------YTVSKHAI 175
            +      +V    G +   A ++S MG +G         Y  SK A+
Sbjct: 110 LLPILLP-LVEAAGGVL---AVLSSRMGSIGDATGTTGWLYRASKAAL 153

Length = 222

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 29/216 (13%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K  ++TG   G G    +     G  V+   +      A     + S  L T L  DV+ 
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRT-LQLDVTK 59

Query: 76  EQDIQNLINVTISKHGRLDI--LFNNAGVLGNQSKHKSITDFDANEFDNI---IRINVRG 130
            + I+          G   +  L NNAG+LG         D +    D+    + +N+ G
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGF------GGDEELLPMDDYRKCMEVNLFG 113

Query: 131 AALGMKYAAKVMVP--RRS-GCIISTAS----VASLMGGLGPHAYTVSKHAIVGLTKNTA 183
                    K  +P  RR+ G +++ +S    V    GG    AY  SK A+   + +  
Sbjct: 114 TV----EVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGG----AYCASKAAVEAFSDSLR 165

Query: 184 CELGKYGIRVNCISP--FGVATSMLVNAWKSCEDCM 217
            EL  +G++V+ I P  F    +     W+     +
Sbjct: 166 RELQPWGVKVSIIEPGNFKTGITGNSELWEKQAKKL 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 42.8 bits (101), Expect = 8e-05
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 26/205 (12%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
              G   ++TGGA GIG A  + F++ G  V+I   ++           + +P +    C
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER----LAEAKAENPEIHTEVC 57

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+     + L+     ++  L++L NNAG+  N+    +    D  E +  I  N+   
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE--IATNL--- 112

Query: 132 ALGMKYAAKVMVP----RRSGCIISTASVASLMGGLG--PHA----YTVSKHAIVGLTKN 181
            L       +++P    +    II+ +S      GL   P A    Y  +K AI   T  
Sbjct: 113 -LAPIRLTALLLPHLLRQPEATIINVSS------GLAFVPMASTPVYCATKAAIHSYTLA 165

Query: 182 TACELGKYGIRVNCISPFGVATSML 206
              +L    + V  ++P  V T+  
Sbjct: 166 LREQLKDTSVEVIELAPPLVDTTEG 190

Length = 245

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 9e-05
 Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 33/203 (16%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV-- 73
           + A++ G +RG+G   V   ++ G +V  A +         D+ L + P V     D+  
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQV-TATVRGPQQ----DTALQALPGVHIEKLDMND 56

Query: 74  --SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE-----FDNIIR- 125
             SL+Q +Q L      +  R D+LF NAG+ G    H+S  D  A E       N I  
Sbjct: 57  PASLDQLLQRL------QGQRFDLLFVNAGISGPA--HQSAADATAAEIGQLFLTNAIAP 108

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASV-ASLMGGLGPHA--YTVSKHAIVGLTKNT 182
           I +    LG        V    G +   +S   S+    G     Y  SK A+  +T++ 
Sbjct: 109 IRLARRLLG-------QVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSF 161

Query: 183 ACELGKYGIRVNCISPFGVATSM 205
             ELG+  + V  + P  V T M
Sbjct: 162 VAELGEPTLTVLSMHPGWVKTDM 184

Length = 225

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 49/196 (25%), Positives = 72/196 (36%), Gaps = 19/196 (9%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVS 74
           KI I+ G    I  A  R +   GA++ +A  D      LAD L +  +  V+    D+ 
Sbjct: 3   KILII-GATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDIL 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
                   ++   S     DI+    G LG+Q+  ++    D        R N  G    
Sbjct: 62  DTASHAAFLD---SLPALPDIVLIAVGTLGDQAACEA----DPALALREFRTNFEGPIAL 114

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE-----LGKY 189
           +   A     R SG I+  +SVA   G    + Y  +K     LT           L K 
Sbjct: 115 LTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAK---AALT--AFLSGLRNRLFKS 169

Query: 190 GIRVNCISPFGVATSM 205
           G+ V  + P  V T M
Sbjct: 170 GVHVLTVKPGFVRTPM 185

Length = 243

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 51/282 (18%)

Query: 12  TLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGI---ALADSLLSSSPLV 66
            L GK  +V G A  + I     R F   GA++ +  ++D A      LA+ L   +P+ 
Sbjct: 7   PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--DAPIF 64

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             L  DV     ++ +      + GRLD L ++      +  H  + D     F   + +
Sbjct: 65  --LPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDV 122

Query: 127 N----VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHA 174
           +    +R A    + A  +M     G +++ +   +        LMG          K A
Sbjct: 123 SCHSFIRMA----RLAEPLM--TNGGSLLTMSYYGAEKVVENYNLMG--------PVKAA 168

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV 234
           +    +  A ELG  GIRV+ ISP  + T               SG    + +  +E+  
Sbjct: 169 LESSVRYLAAELGPKGIRVHAISPGPLKTRAA------------SGID--DFDALLEDAA 214

Query: 235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                 + V +   D+   A +LASD ++ ++G+ L +DGG+
Sbjct: 215 ERAPLRRLVDID--DVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 20/159 (12%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVI---ADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           ++TGG  G+G    R     GA+ ++            A A  L +    V+ + CDV+ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
              +  L+   ++  G L  + + AGVL +      + +     F  ++   V GA    
Sbjct: 214 PAALAALLA-ELAAGGPLAGVIHAAGVLRDA----LLAELTPAAFAAVLAAKVAGALN-- 266

Query: 136 KYAAKVM---VPRRSGC-IISTASVASLMGGLGPHAYTV 170
                 +    P       +  +SVA+L+GG G  AY  
Sbjct: 267 ------LHELTPDLPLDFFVLFSSVAALLGGAGQAAYAA 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 24/203 (11%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVV-IADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           +  I+TG ++G+GEA     ++ G  V+ I+  ++     LA+     +  +T+   D+ 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQ 58

Query: 75  LEQDIQNLIN---VTISKHGRLDI-LFNNAGVL------GNQSKHKSITDFDANEFDNII 124
              +++   N    +I +     I L NNAG++            + IT+   N    +I
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMI 118

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             +       MK+     V +R    IS+ +  +   G    AY  SK  +   T+  A 
Sbjct: 119 LTSTF-----MKHTKDWKVDKRV-INISSGAAKNPYFGWS--AYCSSKAGLDMFTQTVAT 170

Query: 185 E--LGKYGIRVNCISPFGVATSM 205
           E    +Y +++   SP  + T+M
Sbjct: 171 EQEEEEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 41/194 (21%), Positives = 66/194 (34%), Gaps = 36/194 (18%)

Query: 19  IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD 78
           +VTGGA  IG   V   +  G  V   D        L          V ++  D++    
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDL 56

Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
           +  L        G  D + + A          S+ D +A++    + +NV G    ++ A
Sbjct: 57  VDELAK------GVPDAVIHLAAQS-------SVPDSNASDPAEFLDVNVDGTLNLLEAA 103

Query: 139 AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV-----GLTKNTACEL------G 187
               V R     +  +SV+ + G   P                G++K  A E        
Sbjct: 104 RAAGVKR----FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSK-LAAEQLLRAYAR 158

Query: 188 KYGIRVNCISPFGV 201
            YG+ V  + PF V
Sbjct: 159 LYGLPVVILRPFNV 172

Length = 314

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 19/187 (10%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
           A++ G   GIG A  R     G +++++  D  A   LA  + + +        DV+ E 
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA-----RPADVAAEL 55

Query: 78  DIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           ++  L      + G LD+L   AG +LG     K +       +  I+  N+ GAAL +K
Sbjct: 56  EVWAL----AQELGPLDLLVYAAGAILG-----KPLARTKPAAWRRILDANLTGAALVLK 106

Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
           +A  ++        +       ++ GL   AY  +K A+    +    E+   G+R+  +
Sbjct: 107 HALALLAAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEV--RGLRLTLV 162

Query: 197 SPFGVAT 203
            P  V T
Sbjct: 163 RPPAVDT 169

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 22/210 (10%)

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
            HCDV+ E  I  +      K G+LD + +  G            D   + F   + I+V
Sbjct: 65  GHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISV 124

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACEL 186
                  + A K+M    S   ++      +M    PH     V+K A+    K  A +L
Sbjct: 125 YSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM----PHYNVMGVAKAALEASVKYLAVDL 180

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
           G   IRVN IS   + T               SG        K  E    L   + VT++
Sbjct: 181 GPKNIRVNAISAGPIKT------------LAASGIGDFRYILKWNEYNAPLR--RTVTIE 226

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGF 276
             ++ ++ALYL SD S+ ++G    VD G+
Sbjct: 227 --EVGDSALYLLSDLSRGVTGEVHHVDSGY 254

Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	285
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK08264	238	short chain dehydrogenase; Validated	99.98
PRK08177	225	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.88
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.87
PRK06720	169	hypothetical protein; Provisional	99.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.84
PLN00198	338	anthocyanidin reductase; Provisional	99.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.83
PLN02214	342	cinnamoyl-CoA reductase	99.82
PLN02650	351	dihydroflavonol-4-reductase	99.82
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.79
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.79
PLN02572	442	UDP-sulfoquinovose synthase	99.79
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.78
PLN02686	367	cinnamoyl-CoA reductase	99.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.75
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.75
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.74
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.74
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.74
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.73
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.71
PLN02427	386	UDP-apiose/xylose synthase	99.71
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.68
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.66
PLN02260	668	probable rhamnose biosynthetic enzyme	99.65
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.65
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.64
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.64
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.64
PLN02206	442	UDP-glucuronate decarboxylase	99.6
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.6
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.58
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.58
CHL00194	317	ycf39 Ycf39; Provisional	99.58
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.55
PRK07201	657	short chain dehydrogenase; Provisional	99.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.49
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.49
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.48
PRK05865	854	hypothetical protein; Provisional	99.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.47
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.45
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.43
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.42
PLN02996	491	fatty acyl-CoA reductase	99.38
PRK08309	177	short chain dehydrogenase; Provisional	99.37
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.32
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.32
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.3
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.28
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.26
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.23
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.22
PLN02778	298	3,5-epimerase/4-reductase	99.21
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.2
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.19
PLN00016	378	RNA-binding protein; Provisional	99.17
PLN02503	605	fatty acyl-CoA reductase 2	99.14
PRK12320	699	hypothetical protein; Provisional	99.1
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.05
PLN02260	668	probable rhamnose biosynthetic enzyme	99.04
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.98
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.88
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.86
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.83
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.79
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.77
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.72
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.69
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.6
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.59
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.57
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.51
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.43
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.38
COG2910	211	Putative NADH-flavin reductase [General function p	98.35
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.3
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.3
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.27
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.23
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.21
PLN00106	323	malate dehydrogenase	98.2
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.19
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.19
PRK09620	229	hypothetical protein; Provisional	98.06
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.03
PRK14982	340	acyl-ACP reductase; Provisional	98.03
KOG2774	366	consensus NAD dependent epimerase [General functio	97.95
PTZ00325	321	malate dehydrogenase; Provisional	97.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.79
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.79
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.76
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.74
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.72
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.64
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.6
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.47
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.45
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.44
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.42
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.39
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.38
PRK06849	389	hypothetical protein; Provisional	97.37
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.37
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.36
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.35
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.33
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.3
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.25
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.24
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.2
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.19
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.18
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.07
PRK14968	188	putative methyltransferase; Provisional	97.07
PRK05086	312	malate dehydrogenase; Provisional	97.07
COG3268	382	Uncharacterized conserved protein [Function unknow	97.05
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.04
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.04
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.03
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.03
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.02
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.0
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.99
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.95
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.94
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.9
KOG4288	283	consensus Predicted oxidoreductase [General functi	96.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.83
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.83
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.81
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.8
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.78
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.78
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.74
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.72
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.72
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.72
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.69
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.69
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.69
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.68
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.67
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.64
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.56
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.56
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.56
PRK09496	453	trkA potassium transporter peripheral membrane com	96.56
PRK04148	134	hypothetical protein; Provisional	96.47
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.46
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.46
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.44
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.43
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.43
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.41
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.38
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.37
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.32
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.28
PLN00203	519	glutamyl-tRNA reductase	96.28
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.27
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.27
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.26
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.25
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.24
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.15
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.12
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.12
PLN02494	477	adenosylhomocysteinase	96.11
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.11
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.11
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.08
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.03
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.02
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.01
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.98
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.96
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.93
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.83
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.82
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.82
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.82
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.8
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.8
PTZ00117	319	malate dehydrogenase; Provisional	95.79
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.79
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.78
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.77
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.74
PRK09496	453	trkA potassium transporter peripheral membrane com	95.7
PRK05442	326	malate dehydrogenase; Provisional	95.69
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.68
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.68
PRK14967	223	putative methyltransferase; Provisional	95.67
PRK12480	330	D-lactate dehydrogenase; Provisional	95.64
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.63
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.63
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.61
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.59
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.59
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.58
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.58
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.57
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.55
PRK13243	333	glyoxylate reductase; Reviewed	95.55
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.53
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.52
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.52
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.51
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.48
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.47
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.43
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.43
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.4
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.4
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.39
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.36
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.35
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.32
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.31
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.31
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.29
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.29
PRK06932	314	glycerate dehydrogenase; Provisional	95.28
PLN02740	381	Alcohol dehydrogenase-like	95.27
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.25
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.25
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.24
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.23
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.23
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.19
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.19
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.18
PRK08655	437	prephenate dehydrogenase; Provisional	95.18
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.17
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.17
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.14
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.14
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.11
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.11
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.09
PLN03139	386	formate dehydrogenase; Provisional	95.08
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	95.02
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.01
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.01
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.99
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.99
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	94.98
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.98
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.95
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.94
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.94
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.92
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.92
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.92
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.88
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.87
PRK11207	197	tellurite resistance protein TehB; Provisional	94.86
PLN02602	350	lactate dehydrogenase	94.84
PTZ00354	334	alcohol dehydrogenase; Provisional	94.84
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.82
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.81
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.77
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	94.75
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.74
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.73

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=8.1e-50  Score=311.57  Aligned_cols=244  Identities=33%  Similarity=0.485  Sum_probs=219.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .++.|+++||||++|||++++..|++.|++|++++++....++....+... .....+.||+++..+++.++++..+.+|
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999888888777432 4667789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh--hcCCCCceEEEEcccccccCCCCCccch
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++||||||+...    ..+..+..++|++.+.+|+.|.|+..|++.+.  +.++.+.+||++||+.+..+.-+...|+
T Consensus        90 ~psvlVncAGItrD----~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYA  165 (256)
T KOG1200|consen   90 TPSVLVNCAGITRD----GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYA  165 (256)
T ss_pred             CCcEEEEcCccccc----cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhh
Confidence            99999999999755    67888999999999999999999999999998  4444566999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+++.+|+|++|+|++++|||||.+.||+|.|||+....+                ....+....  -|.+|+..+||
T Consensus       166 AsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~----------------~v~~ki~~~--iPmgr~G~~Ee  227 (256)
T KOG1200|consen  166 ASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP----------------KVLDKILGM--IPMGRLGEAEE  227 (256)
T ss_pred             hhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH----------------HHHHHHHcc--CCccccCCHHH
Confidence            999999999999999999999999999999999999876432                233333332  58899999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+.++||+|+.++|+||+.+.|+||..+
T Consensus       228 vA~~V~fLAS~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  228 VANLVLFLASDASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             HHHHHHHHhccccccccceeEEEeccccC
Confidence            99999999999999999999999999863

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-48  Score=334.25  Aligned_cols=259  Identities=24%  Similarity=0.305  Sum_probs=220.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++++|++|.++++++++++. 
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-
Confidence            34689999999999999999999999999999999999998888887777543 4578899999999999999999985 


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|
T Consensus        82 ~~g~iD~lv~nag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y  157 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKP----GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALS  157 (263)
T ss_pred             hhCCCcEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhh
Confidence            58999999999997543    56778999999999999999999999999999988878999999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+++++.|++++|||||+|+||+|+|++..........     ......++..+....  ..|.+++.+|+
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~p~~r~~~p~  230 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAK-----REGKSVEEALQEYAK--PIPLGRLGEPE  230 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhh-----ccCCCHHHHHHHHhc--cCCcccCcCHH
Confidence            99999999999999999999999999999999999987543211000     000011122222222  24678999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++||+++.+.++||+++.+|||+..+-
T Consensus       231 dva~~v~fL~s~~~~~itG~~~~vdgG~~~~~  262 (263)
T PRK08339        231 EIGYLVAFLASDLGSYINGAMIPVDGGRLNSV  262 (263)
T ss_pred             HHHHHHHHHhcchhcCccCceEEECCCccccC
Confidence            99999999999999999999999999998763

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-47  Score=327.72  Aligned_cols=247  Identities=22%  Similarity=0.279  Sum_probs=209.9

Q ss_pred             ccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..|++|+++||||+  +|||+++|++|+++|++|++++|+. +..+..+++.  ..++.+++||++|.++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            34789999999999  8999999999999999999999984 4444444442  24678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||+++|.++..+.+.+..|
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y  157 (252)
T PRK06079         80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVM  157 (252)
T ss_pred             HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhh
Confidence            99999999999998643222357788999999999999999999999999999953  5899999999988888899999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+++++.|++++||+||+|+||+|+|++......              .++..+....  ..|.++..+||
T Consensus       158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~r~~~pe  221 (252)
T PRK06079        158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG--------------HKDLLKESDS--RTVDGVGVTIE  221 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC--------------hHHHHHHHHh--cCcccCCCCHH
Confidence            9999999999999999999999999999999999997543210              0112222222  24678899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+++.+.+++|+++.+|||+++
T Consensus       222 dva~~~~~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        222 EVGNTAAFLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             HHHHHHHHHhCcccccccccEEEeCCceec
Confidence            999999999999999999999999999864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-47  Score=330.11  Aligned_cols=249  Identities=17%  Similarity=0.212  Sum_probs=206.7

Q ss_pred             ccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        11 ~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      |.|++|++|||||+  +|||+++|++|+++|++|++++|+.+ ..+..+++.+ .+.+ .++++|++|.++++++++++.
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            46789999999997  89999999999999999999998853 2223333322 2333 678999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      ++++++|+||||||+........++.+.+.++|+++|++|+.+++.++++++|.|.+  .|+||++||.++..+.|++..
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~  156 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNV  156 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchh
Confidence            999999999999998532112256788999999999999999999999999999964  489999999988888888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+.+|+++++.|++++||+||+|+||+|+|++......              . +...... ....|.++..+|
T Consensus       157 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--------------~-~~~~~~~-~~~~pl~r~~~p  220 (274)
T PRK08415        157 MGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD--------------F-RMILKWN-EINAPLKKNVSI  220 (274)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch--------------h-hHHhhhh-hhhCchhccCCH
Confidence            99999999999999999999999999999999999987542100              0 0011111 112467888999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ||+|++++||+++.+.++||+++.+|||+...
T Consensus       221 edva~~v~fL~s~~~~~itG~~i~vdGG~~~~  252 (274)
T PRK08415        221 EEVGNSGMYLLSDLSSGVTGEIHYVDAGYNIM  252 (274)
T ss_pred             HHHHHHHHHHhhhhhhcccccEEEEcCccccc
Confidence            99999999999999999999999999998764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-47  Score=325.80  Aligned_cols=247  Identities=30%  Similarity=0.478  Sum_probs=212.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|+++||||++|||++++++|+++|++|++++|+..  ++..+.+.+.+.++.++++|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999988643  3344444444667899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|
T Consensus        81 ~g~iD~lv~~ag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  156 (251)
T PRK12481         81 MGHIDILINNAGIIRR----QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSY  156 (251)
T ss_pred             cCCCCEEEECCCcCCC----CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcch
Confidence            9999999999998643    5677889999999999999999999999999997654 5899999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++.......              .+.......  ..|.++..+||
T Consensus       157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~--------------~~~~~~~~~--~~p~~~~~~pe  220 (251)
T PRK12481        157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD--------------TARNEAILE--RIPASRWGTPD  220 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC--------------hHHHHHHHh--cCCCCCCcCHH
Confidence            99999999999999999999999999999999999986542110              111112222  24678889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+++.+.+++|++|.+|||+..
T Consensus       221 eva~~~~~L~s~~~~~~~G~~i~vdgg~~~  250 (251)
T PRK12481        221 DLAGPAIFLSSSASDYVTGYTLAVDGGWLA  250 (251)
T ss_pred             HHHHHHHHHhCccccCcCCceEEECCCEec
Confidence            999999999999999999999999999864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-47  Score=329.11  Aligned_cols=249  Identities=22%  Similarity=0.245  Sum_probs=206.3

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|++|++|||||++  |||+++|++|+++|++|++++|+.+..+. .+++.+..+...++++|++|.++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            47899999999996  99999999999999999999987643333 3333222223357899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +|++|+||||||+....+...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||+++|..+..+.|++..|+
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  160 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMG  160 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhh
Confidence            9999999999998542111246778999999999999999999999999999963  48999999999888888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+.+|+|+|+.|++++|||||+|+||+|+|++.....              +. +........ ..|.++..+|||
T Consensus       161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~--------------~~-~~~~~~~~~-~~p~~r~~~pee  224 (271)
T PRK06505        161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG--------------DA-RAIFSYQQR-NSPLRRTVTIDE  224 (271)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc--------------ch-HHHHHHHhh-cCCccccCCHHH
Confidence            99999999999999999999999999999999998753210              00 111111111 246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.+.++||++|.+|||++..
T Consensus       225 va~~~~fL~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        225 VGGSALYLLSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             HHHHHHHHhCccccccCceEEeecCCcccC
Confidence            999999999999999999999999998754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3e-47  Score=326.38  Aligned_cols=252  Identities=23%  Similarity=0.264  Sum_probs=211.1

Q ss_pred             cccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCch--hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDA--AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        10 ~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      |+++++|+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+...++.++++|++|.+++++++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence            356899999999986  89999999999999999998876543  33445555544445577899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.++++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.|+.
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence            99999999999999997532112256788899999999999999999999999999964  5899999999998888999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++|+++|+.|++++||+||+|+||+|+|++.... ..             ..+..+....  ..|.++..
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~-------------~~~~~~~~~~--~~p~~r~~  222 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GG-------------ILDMIHHVEE--KAPLRRTV  222 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-cc-------------chhhhhhhhh--cCCcCcCC
Confidence            99999999999999999999999999999999999999975421 10             0011111111  24678899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++++++||+++.++++||+++.+|||+++.
T Consensus       223 ~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        223 TQTEVGNTAAFLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             CHHHHHHHHHHHhChhhccccCcEEEECCccccc
Confidence            9999999999999999999999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.3e-47  Score=324.74  Aligned_cols=250  Identities=22%  Similarity=0.205  Sum_probs=207.9

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|++|+++||||++  |||+++|++|+++|++|++++|+. ..++..+++.+..+...++++|++|.++++++++++.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999997  999999999999999999998874 334444444333223356799999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||+++|..+..+.++...|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence            9999999999997532111246778899999999999999999999999999953  58999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.....              ...+..+....  ..|.++..+|||
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--------------~~~~~~~~~~~--~~p~~r~~~ped  225 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG--------------DFSTMLKSHAA--TAPLKRNTTQED  225 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC--------------CcHHHHHHHHh--cCCcCCCCCHHH
Confidence            99999999999999999999999999999999999753210              00111122221  246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|++++||+++.+.++||++|.+|||+....
T Consensus       226 va~~~~~L~s~~~~~itG~~i~vdgG~~~~~  256 (260)
T PRK06603        226 VGGAAVYLFSELSKGVTGEIHYVDCGYNIMG  256 (260)
T ss_pred             HHHHHHHHhCcccccCcceEEEeCCcccccC
Confidence            9999999999999999999999999988743

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-47  Score=325.07  Aligned_cols=253  Identities=28%  Similarity=0.436  Sum_probs=219.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+  .+.++.++++|+++.+++.++++++.
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999999988888887765  35678899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus        82 ~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVF----ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFP  157 (260)
T ss_pred             HHhCCCcEEEECCCcCCC----CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchH
Confidence            999999999999997543    4556788999999999999999999999999998777899999999999888888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|+|+++++++++.|++++||+||+|+||+|+|++....+..        .+  ...........  ..|.+++.+|
T Consensus       158 Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~--------~~--~~~~~~~~~~~--~~~~~r~~~~  225 (260)
T PRK07063        158 YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNA--------QP--DPAAARAETLA--LQPMKRIGRP  225 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhc--------cC--ChHHHHHHHHh--cCCCCCCCCH
Confidence            999999999999999999999999999999999999987654321        00  00111111111  2467889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|++++||+++.+.|+||++|.+|||++.
T Consensus       226 ~~va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        226 EEVAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HHHHHHHHHHcCccccccCCcEEEECCCeee
Confidence            9999999999999999999999999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6e-47  Score=324.55  Aligned_cols=252  Identities=21%  Similarity=0.288  Sum_probs=209.8

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      +.++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+....+.+++||++|.++++++++++
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence            3456899999999999  59999999999999999999999865422 22233222234568899999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .++++++|++|||||+........++.+.+.++|++.+++|+.+++.+++.++|.|+  +.|+||++||..+..+.+++.
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~~~~~~~~~  160 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGAEKVVENYN  160 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEeccccccCCccch
Confidence            999999999999999854322235678889999999999999999999999999995  358999999998888888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+++|+++|+.|++++||+||+|+||+|+|++.+....              ..+..+....  ..|.+++.+
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~r~~~  224 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD--------------FDALLEDAAE--RAPLRRLVD  224 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC--------------cHHHHHHHHh--cCCcCCCCC
Confidence            999999999999999999999999999999999999998643210              0111122222  246788999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|+|++++||+++++.+++|+.+.+|||++.+
T Consensus       225 p~dva~~~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        225 IDDVGAVAAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HHHHHHHHHHHhChhhccccCcEEeeCCccccc
Confidence            999999999999999999999999999998765

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.6e-47  Score=325.24  Aligned_cols=250  Identities=20%  Similarity=0.225  Sum_probs=207.4

Q ss_pred             ccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..|++|++|||||  ++|||+++|++|+++|++|++++|+. +..+..+++.+..+....++||++|.++++++++++.+
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH
Confidence            3478999999997  67999999999999999999988764 33444455543334456799999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCC-CCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++++|++|||||+........+ +.+.+.++|+..+++|+.+++.+.++++|.|+++ .|+||++||.++..+.|++..
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCccc
Confidence            99999999999998643211112 4567889999999999999999999999999644 589999999999888899999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|+|+++|+++++.|++++||+||+|+||+|+|++......              ..+.......  ..|.+|+.+|
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~r~~~p  223 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD--------------FGKLLGHVAA--HNPLRRNVTI  223 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc--------------hHHHHHHHhh--cCCCCCCCCH
Confidence            99999999999999999999999999999999999998643210              0111112212  2477889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ||+|++++||+++.+.+++|++|.+|||+..
T Consensus       224 eevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        224 EEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            9999999999999999999999999999875

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.1e-46  Score=322.33  Aligned_cols=259  Identities=40%  Similarity=0.528  Sum_probs=218.4

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC---CCceEEEeccCCCHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS---SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ++..|.+|+++|||+++|||+++|++|++.|++|++++|+.+.+++..+.+...   +.++..+.||+++.+++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999999888877653   34699999999999999999999


Q ss_pred             HHHH-cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhh-HHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           86 TISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG-AALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        86 i~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      ..++ +|++|++|||||.....   .+..+.+.++|++.+++|+.| .+.+.+.+.+.+.+++.|.|+++||..+..+.+
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~---~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~  158 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLT---GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP  158 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCC---CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence            9998 79999999999997553   378999999999999999995 666667777777777899999999998887766


Q ss_pred             CC-ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          164 GP-HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       164 ~~-~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      .. ..|+++|+|+++|+|++|.||+++|||||+|+||+|.|++.......           ....+..+....+-..|.+
T Consensus       159 ~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~-----------~~~~~~~~~~~~~~~~p~g  227 (270)
T KOG0725|consen  159 GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDD-----------GEMEEFKEATDSKGAVPLG  227 (270)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccccccc-----------chhhHHhhhhccccccccC
Confidence            65 79999999999999999999999999999999999999982211111           0011111111112235789


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +...|+|+++.+.||++++++|++|++|.+|||++...+
T Consensus       228 r~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~~~~  266 (270)
T KOG0725|consen  228 RVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTVVGP  266 (270)
T ss_pred             CccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEeecc
Confidence            999999999999999999988999999999999998664

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-46  Score=320.88  Aligned_cols=246  Identities=34%  Similarity=0.443  Sum_probs=214.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+|+++.++++++++++.+.
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999888888887666677889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCC-C-CCc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGG-L-GPH  166 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~-~-~~~  166 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++|+++||..+..+. + ...
T Consensus        84 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~  159 (253)
T PRK05867         84 LGGIDIAVCNAGIITV----TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS  159 (253)
T ss_pred             hCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCcc
Confidence            9999999999998643    5677889999999999999999999999999997654 5799999998776433 3 457


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|++++++++++|++++||+||+|+||+|+|++.....                 +....+..  ..+.+++.+
T Consensus       160 ~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~-----------------~~~~~~~~--~~~~~r~~~  220 (253)
T PRK05867        160 HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT-----------------EYQPLWEP--KIPLGRLGR  220 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch-----------------HHHHHHHh--cCCCCCCcC
Confidence            89999999999999999999999999999999999999864310                 11111111  246788999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+|++++||+++.++++||+.|.+|||++.
T Consensus       221 p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        221 PEELAGLYLYLASEASSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             HHHHHHHHHHHcCcccCCcCCCeEEECCCccC
Confidence            99999999999999999999999999999864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-46  Score=320.77  Aligned_cols=250  Identities=23%  Similarity=0.252  Sum_probs=209.5

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCc---hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDD---AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      ||+++++|+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.  +.++.++++|++|.+++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHH
Confidence            4678999999999997  8999999999999999999998753   33334433331  456889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +++.++++++|++|||||+........++.+.+.++|.+.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~  156 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQ  156 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCC
Confidence            9999999999999999997643222356778899999999999999999999999999954  58999999999988888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      .+..|++||+|+++|+++++.|++++||+||+|+||+++|++......              ..+.......  ..|.++
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~r  220 (257)
T PRK08594        157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG--------------FNSILKEIEE--RAPLRR  220 (257)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc--------------ccHHHHHHhh--cCCccc
Confidence            899999999999999999999999999999999999999997542100              0011111111  236778


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..+|+|+|+.++||+++.++++||+++.+|||+..
T Consensus       221 ~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        221 TTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             cCCHHHHHHHHHHHcCcccccccceEEEECCchhc
Confidence            89999999999999999999999999999999864

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-46  Score=318.62  Aligned_cols=252  Identities=33%  Similarity=0.501  Sum_probs=219.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ||++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|+++.++++++++++.++
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999888888888766678899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~~Y  168 (285)
                      ++++|+||||||.....   .++.+.+.++|++.+++|+.+++.+.++++|.|++++.++||++||..+. .+.++...|
T Consensus        81 ~~~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y  157 (254)
T PRK07478         81 FGGLDIAFNNAGTLGEM---GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAY  157 (254)
T ss_pred             cCCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchh
Confidence            99999999999985332   46778899999999999999999999999999988888999999998876 467888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|++.++++++.|++++||+||+|+||+++|++.+.....           .    ........ ..+.+++.+|+
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----------~----~~~~~~~~-~~~~~~~~~~~  221 (254)
T PRK07478        158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-----------P----EALAFVAG-LHALKRMAQPE  221 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-----------H----HHHHHHHh-cCCCCCCcCHH
Confidence            99999999999999999999999999999999999986532110           1    11112221 23567888999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|+.++||+++.+.+++|+.|.+|||++.-+
T Consensus       222 ~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~~  253 (254)
T PRK07478        222 EIAQAALFLASDAASFVTGTALLVDGGVSITR  253 (254)
T ss_pred             HHHHHHHHHcCchhcCCCCCeEEeCCchhccC
Confidence            99999999999999999999999999987643

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-46  Score=320.01  Aligned_cols=260  Identities=25%  Similarity=0.330  Sum_probs=220.9

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|.++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999998888877777554  246889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++..
T Consensus        82 ~~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  157 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGRV----STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMV  157 (265)
T ss_pred             HHhcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCch
Confidence            9999999999999998543    567788999999999999999999999999999887789999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+.+++++++.|++++||+||+|+||+|+|++....+....      .......+...+.......|.+++.+
T Consensus       158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~r~~~  231 (265)
T PRK07062        158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARA------DPGQSWEAWTAALARKKGIPLGRLGR  231 (265)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhh------ccCCChHHHHHHHhhcCCCCcCCCCC
Confidence            999999999999999999999999999999999999998654332100      00001111111211112347788999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+|++++||+++.+.++||+++.+|||+..
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEcCceEe
Confidence            99999999999999999999999999999764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.7e-46  Score=320.73  Aligned_cols=249  Identities=23%  Similarity=0.248  Sum_probs=206.1

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|++|++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+.......+++|++|.++++++++++.++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            4689999999997  89999999999999999999987632 23333333322234567899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||+........++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||+++|.++..+.|++..|+
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~  163 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMG  163 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhh
Confidence            9999999999998643222356778899999999999999999999999999953  58999999998888889999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+.+|+++|+.|++++||+||+|+||+++|++.... +.             . +...+... ...|.++..+|||
T Consensus       164 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-------------~-~~~~~~~~-~~~p~~r~~~pee  227 (272)
T PRK08159        164 VAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GD-------------F-RYILKWNE-YNAPLRRTVTIEE  227 (272)
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Cc-------------c-hHHHHHHH-hCCcccccCCHHH
Confidence            9999999999999999999999999999999999875321 00             0 01111111 1246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.+.++||++|.+|||++..
T Consensus       228 vA~~~~~L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        228 VGDSALYLLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HHHHHHHHhCccccCccceEEEECCCceee
Confidence            999999999999999999999999998753

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-45  Score=319.09  Aligned_cols=258  Identities=31%  Similarity=0.495  Sum_probs=218.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++.+.+.++.++++|+++.++++++++++.+.+
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999 77777777776656678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||.....   .++.+.+.+.|++++++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++
T Consensus        81 g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  156 (272)
T PRK08589         81 GRVDVLFNNAGVDNAA---GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNA  156 (272)
T ss_pred             CCcCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHH
Confidence            9999999999986321   4567789999999999999999999999999997654 89999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++|+++++.|++++||+||+|+||+|+|++........+         ......+..... ...+.+++.+|+|+
T Consensus       157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~v  226 (272)
T PRK08589        157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE---------DEAGKTFRENQK-WMTPLGRLGKPEEV  226 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch---------hhHHHHHhhhhh-ccCCCCCCcCHHHH
Confidence            99999999999999999999999999999999998754321100         000011111111 12467788899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccccccccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTSKNCVG  284 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~~  284 (285)
                      ++.++||+++.+++++|+++.+|||+... .|.|
T Consensus       227 a~~~~~l~s~~~~~~~G~~i~vdgg~~~~-~~~~  259 (272)
T PRK08589        227 AKLVVFLASDDSSFITGETIRIDGGVMAY-TWPG  259 (272)
T ss_pred             HHHHHHHcCchhcCcCCCEEEECCCcccC-CCCC
Confidence            99999999999999999999999998643 5554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-45  Score=317.06  Aligned_cols=247  Identities=19%  Similarity=0.205  Sum_probs=205.9

Q ss_pred             CCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++|++|||||++  |||+++|++|+++|++|++++|+ +++++..+++....+++.+++||++|.++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            7899999999986  99999999999999999999987 34455556665444567789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKH-KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|++|||||+....... .++.+.+.++|++.+++|+.+++.+.+++.|.+.  ..|+||++||.++..+.+++..|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhH
Confidence            9999999999975321111 1256778999999999999999999999998664  348999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.... +             +..+..+....  ..|.++..+|+|
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~-------------~~~~~~~~~~~--~~p~~r~~~ped  224 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-K-------------DFRKMLAHCEA--VTPIRRTVTIED  224 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-C-------------chHHHHHHHHH--cCCCcCCCCHHH
Confidence            9999999999999999999999999999999999874321 0             00111111111  246788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++||+++.+++++|+++.+|||+..
T Consensus       225 va~~~~~L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        225 VGNSAAFLCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             HHHHHHHHcCcccccccCcEEEECCCccc
Confidence            99999999999999999999999999865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=6e-46  Score=303.01  Aligned_cols=231  Identities=34%  Similarity=0.463  Sum_probs=206.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |..+++|+++|||||||||.++|++|+++|++|+++.|+.++++++++++.+  .++.++..|++|.++++.+++.+.++
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            3467889999999999999999999999999999999999999999999954  67999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      |+++|+||||||....    .++.+.+.++|++++++|+.|.++..++++|.|.+++.|+||++||.++..+.|+.+.|+
T Consensus        79 ~g~iDiLvNNAGl~~g----~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~  154 (246)
T COG4221          79 FGRIDILVNNAGLALG----DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYG  154 (246)
T ss_pred             hCcccEEEecCCCCcC----ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccch
Confidence            9999999999999754    788999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+++..|++.|+.|+..++|||.+|.||.+.|.........            ...+.....+.     .....+|+|
T Consensus       155 ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~------------g~~~~~~~~y~-----~~~~l~p~d  217 (246)
T COG4221         155 ATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE------------GDDERADKVYK-----GGTALTPED  217 (246)
T ss_pred             hhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC------------chhhhHHHHhc-----cCCCCCHHH
Confidence            9999999999999999999999999999999987765443221            12334433332     234679999


Q ss_pred             HHHHHHHHhcCCCC
Q 040531          250 IAEAALYLASDESK  263 (285)
Q Consensus       250 va~~~~~l~s~~~~  263 (285)
                      +|+.+.|.++.+.+
T Consensus       218 IA~~V~~~~~~P~~  231 (246)
T COG4221         218 IAEAVLFAATQPQH  231 (246)
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999977654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-45  Score=317.24  Aligned_cols=250  Identities=17%  Similarity=0.180  Sum_probs=202.0

Q ss_pred             ccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..|++|++|||||  ++|||+++|++|+++|++|++++|.... .+..+++.+..+...++++|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHH
Confidence            3478999999996  6899999999999999999998764222 222223322222335789999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCC-CCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++++|++|||||+........+ +.+.+.++|++.|++|+.+++.++++++|.|.  +.|+||++||..+..+.++...
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcch
Confidence            99999999999998533111112 45678999999999999999999999999994  3589999999998888888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++......              ..+..+....  ..|.++..+|
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~r~~~p  222 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD--------------FGKILDFVES--NAPLRRNVTI  222 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc--------------hhhHHHHHHh--cCcccccCCH
Confidence            99999999999999999999999999999999999987532110              0111112111  2467888999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ||++++++||+++++.|+||++|.+|||++..
T Consensus       223 edva~~~~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        223 EEVGNVAAFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             HHHHHHHHHHhCccccCcceeEEEEcCChhhc
Confidence            99999999999999999999999999998764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=315.46  Aligned_cols=249  Identities=26%  Similarity=0.407  Sum_probs=214.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ++++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+.+.+.+.++.++++|+++++++.++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998764 45666666665566788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC--Cc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG--PH  166 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~--~~  166 (285)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++  ..
T Consensus        83 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  158 (254)
T PRK06114         83 ELGALTLAVNAAGIANA----NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQA  158 (254)
T ss_pred             HcCCCCEEEECCCCCCC----CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcc
Confidence            99999999999998643    5677889999999999999999999999999998888899999999988766553  67


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+++++++++.|+.++||+||+|+||+++|++....               ...+..+....  ..|.++..+
T Consensus       159 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~---------------~~~~~~~~~~~--~~p~~r~~~  221 (254)
T PRK06114        159 HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP---------------EMVHQTKLFEE--QTPMQRMAK  221 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc---------------cchHHHHHHHh--cCCCCCCcC
Confidence            9999999999999999999999999999999999999985421               00011112212  347789999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |||+++.++||+++.++|+||++|.+|||+..+
T Consensus       222 ~~dva~~~~~l~s~~~~~~tG~~i~~dgg~~~~  254 (254)
T PRK06114        222 VDEMVGPAVFLLSDAASFCTGVDLLVDGGFVCW  254 (254)
T ss_pred             HHHHHHHHHHHcCccccCcCCceEEECcCEecC
Confidence            999999999999999999999999999998753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-45  Score=315.13  Aligned_cols=254  Identities=25%  Similarity=0.313  Sum_probs=215.4

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++.+|++|+++||||++|||++++++|+++|++|++++| +.+.++...+.+.. .+.++.++++|++|.++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            566899999999999999999999999999999998865 45555666655543 2457899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCC--CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQ--SKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG  164 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~  164 (285)
                      .+.++++|++|||||.....  ....++.+.+.++|++.+++|+.+++.+.+.++|.|++++.|+||++||..+..+.++
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            99999999999999875321  1224677788999999999999999999999999998777899999999988888889


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      +..|+++|+|+++++++++.|++++||+||+|+||+++|++......              .++..+....  ..|.++.
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~--------------~~~~~~~~~~--~~~~~r~  225 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN--------------YEEVKAKTEE--LSPLNRM  225 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC--------------CHHHHHHHHh--cCCCCCC
Confidence            99999999999999999999999999999999999999998653211              0111111122  2467888


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+|+|++++++||+++.+.+++|+.+.+|||+++
T Consensus       226 ~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        226 GQPEDLAGACLFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             CCHHHHHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence            9999999999999999999999999999999865

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-45  Score=312.67  Aligned_cols=249  Identities=22%  Similarity=0.168  Sum_probs=203.7

Q ss_pred             ccccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         9 ~~~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      ||.++++|+++||||  ++|||++++++|+++|++|++++|++  +.+++..+++   ..++.++++|++|.++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHH
Confidence            456789999999999  89999999999999999999998764  3334443333   2357789999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG  164 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~  164 (285)
                      ++.++++++|++|||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++++.+ ..+.+.
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~  154 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPA  154 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCc
Confidence            999999999999999998632111235778889999999999999999999999999963  48999998753 455677


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC-C
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG-V  243 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  243 (285)
                      +..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+....            .  .+....+..  ..|.+ +
T Consensus       155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~------------~--~~~~~~~~~--~~p~~~~  218 (256)
T PRK07889        155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG------------F--ELLEEGWDE--RAPLGWD  218 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC------------c--HHHHHHHHh--cCccccc
Confidence            88899999999999999999999999999999999999998643210            0  011111111  23555 5


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +.+|+|+|+.++||+++.+.+++|+++.+|||++..
T Consensus       219 ~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        219 VKDPTPVARAVVALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             cCCHHHHHHHHHHHhCcccccccceEEEEcCceecc
Confidence            789999999999999999999999999999998754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.6e-45  Score=318.11  Aligned_cols=251  Identities=22%  Similarity=0.214  Sum_probs=207.6

Q ss_pred             ccccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC----------C---CceEEEeccC
Q 040531            9 AYKTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS----------S---PLVTYLHCDV   73 (285)
Q Consensus         9 ~~~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~----------~---~~v~~~~~D~   73 (285)
                      +.++|+||++|||||  ++|||+++|+.|+++|++|++ .|+.+.++++...+.+.          +   .....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            456799999999999  899999999999999999998 78888887777666421          1   1146788998


Q ss_pred             --CC------------------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHH
Q 040531           74 --SL------------------EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL  133 (285)
Q Consensus        74 --s~------------------~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  133 (285)
                        ++                  .++++++++++.+.+|++|+||||||....  ...++.+.+.++|++++++|+.+++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~--~~~~~~~~~~e~~~~~~~vN~~~~~~  159 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPE--VTKPLLETSRKGYLAAISASSYSFVS  159 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc--CCCChhhCCHHHHHHHHHHHhHHHHH
Confidence              33                  448999999999999999999999986421  12578889999999999999999999


Q ss_pred             HHHHHHHhhcCCCCceEEEEcccccccCCCCC-ccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhhc
Q 040531          134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGP-HAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAWK  211 (285)
Q Consensus       134 l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~-~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~~  211 (285)
                      ++|+++|.|++  .|+||++||..+..+.|++ ..|++||+|+++|+++|+.|+++ +|||||+|+||+|+|++.... +
T Consensus       160 l~~~~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~-~  236 (303)
T PLN02730        160 LLQHFGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI-G  236 (303)
T ss_pred             HHHHHHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc-c
Confidence            99999999965  3999999999888887765 47999999999999999999986 799999999999999987541 1


Q ss_pred             ccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          212 SCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      .           .  ++.......  ..|.++..+|+|+++.++||+|+.+.+++|+.+.+|||++..+
T Consensus       237 ~-----------~--~~~~~~~~~--~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g  290 (303)
T PLN02730        237 F-----------I--DDMIEYSYA--NAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG  290 (303)
T ss_pred             c-----------c--HHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccc
Confidence            0           0  111111111  2356788899999999999999999999999999999987643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-45  Score=310.80  Aligned_cols=249  Identities=28%  Similarity=0.378  Sum_probs=219.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999998888888877665667888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||+|....    .++.+.+.++|++.+++|+.+++.+.+++.+.+++++.++||++||..+..+.++...|+
T Consensus        84 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (254)
T PRK08085         84 IGPIDVLINNAGIQRR----HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYA  159 (254)
T ss_pred             cCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchH
Confidence            9999999999997543    567788999999999999999999999999999877789999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++++++++.|++++||++|+|+||+++|++.......               +.+.+.... ..|.+++.+|||
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~---------------~~~~~~~~~-~~p~~~~~~~~~  223 (254)
T PRK08085        160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED---------------EAFTAWLCK-RTPAARWGDPQE  223 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC---------------HHHHHHHHh-cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999986542110               111111111 356788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++||+++.+++++|+.+.+|||+..
T Consensus       224 va~~~~~l~~~~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        224 LIGAAVFLSSKASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             HHHHHHHHhCccccCCcCCEEEECCCeee
Confidence            99999999999999999999999999865

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-45  Score=311.99  Aligned_cols=252  Identities=29%  Similarity=0.436  Sum_probs=215.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|+++.+++.++++.+.+.
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988777766655   456889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....    .. .+.+.++|++.+++|+.+++.++++++|.|. ++.|+||++||..+..+.++...|+
T Consensus        78 ~g~id~lv~~ag~~~~----~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~  151 (261)
T PRK08265         78 FGRVDILVNLACTYLD----DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYP  151 (261)
T ss_pred             hCCCCEEEECCCCCCC----Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhH
Confidence            9999999999997543    22 2568899999999999999999999999997 6679999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++++++++.|++++||+||+|+||+++|++.......             ..+..... .....+.+++.+|+|
T Consensus       152 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~-------------~~~~~~~~-~~~~~p~~r~~~p~d  217 (261)
T PRK08265        152 ASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG-------------DRAKADRV-AAPFHLLGRVGDPEE  217 (261)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc-------------chhHHHHh-hcccCCCCCccCHHH
Confidence            9999999999999999999999999999999999986543211             00111111 111246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNCVG  284 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~~  284 (285)
                      +|++++||+++.+.+++|+.|.+|||++..++..|
T Consensus       218 va~~~~~l~s~~~~~~tG~~i~vdgg~~~~~~~~~  252 (261)
T PRK08265        218 VAQVVAFLCSDAASFVTGADYAVDGGYSALGPEQG  252 (261)
T ss_pred             HHHHHHHHcCccccCccCcEEEECCCeeccCCCCC
Confidence            99999999999999999999999999988765443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-44  Score=313.80  Aligned_cols=259  Identities=27%  Similarity=0.373  Sum_probs=221.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.+.++.++++|+++.+++..+++++.+++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999999999999999888888877776656678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC-----------CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc
Q 040531           91 GRLDILFNNAGVLGNQS-----------KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL  159 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~-----------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~  159 (285)
                      +++|++|||||......           ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            99999999999754321           1235678889999999999999999999999999987778999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          160 MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       160 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      .+.++...|+++|+|+++++++++.|++++||+||+|+||+|.|++.+.......         ....+..+....  ..
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~~--~~  234 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED---------GSLTERANKILA--HT  234 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccc---------ccchhHHHHHhc--cC
Confidence            9989999999999999999999999999999999999999999998654322100         001111122222  24


Q ss_pred             ccCCCCCHHHHHHHHHHHhcC-CCCcccccEEEecCCccccc
Q 040531          240 LKGVTLKARDIAEAALYLASD-ESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~-~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |.+++.+|+|+|++++||+++ .+.++||+.|.+|||++...
T Consensus       235 p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~  276 (278)
T PRK08277        235 PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAYS  276 (278)
T ss_pred             CccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeeccc
Confidence            778899999999999999999 89999999999999988654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.2e-45  Score=313.47  Aligned_cols=237  Identities=34%  Similarity=0.502  Sum_probs=206.4

Q ss_pred             cCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc-CCccEEEE
Q 040531           22 GGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH-GRLDILFN   98 (285)
Q Consensus        22 Gas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~-~~id~lv~   98 (285)
                      |++  +|||+++|++|+++|++|++++|+.+.+.+..+++.+..+ ..++++|++++++++++++++.+.+ |++|+|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            667  9999999999999999999999999987777766655333 2259999999999999999999999 99999999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHHHH
Q 040531           99 NAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL  178 (285)
Q Consensus        99 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l  178 (285)
                      |+|.........++.+.+.++|++.+++|+.+++.++|++.|.|.+  .|+||++||..+..+.+++..|+++|+|+++|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~l  157 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEGL  157 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHHH
Confidence            9998654223477888999999999999999999999999998854  49999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHH
Q 040531          179 TKNTACELGK-YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYL  257 (285)
Q Consensus       179 ~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l  257 (285)
                      +|++|.||++ +|||||+|+||++.|++......              .++..+....  ..|.+|..+|+|+|++++||
T Consensus       158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~--------------~~~~~~~~~~--~~pl~r~~~~~evA~~v~fL  221 (241)
T PF13561_consen  158 TRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG--------------NEEFLEELKK--RIPLGRLGTPEEVANAVLFL  221 (241)
T ss_dssp             HHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT--------------HHHHHHHHHH--HSTTSSHBEHHHHHHHHHHH
T ss_pred             HHHHHHHhccccCeeeeeecccceeccchhcccc--------------ccchhhhhhh--hhccCCCcCHHHHHHHHHHH
Confidence            9999999999 99999999999999998654321              1122222222  46889989999999999999


Q ss_pred             hcCCCCcccccEEEecCCcc
Q 040531          258 ASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       258 ~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+.++|+|||+|.||||++
T Consensus       222 ~s~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  222 ASDAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             HSGGGTTGTSEEEEESTTGG
T ss_pred             hCccccCccCCeEEECCCcC
Confidence            99999999999999999986

...

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=309.77  Aligned_cols=256  Identities=20%  Similarity=0.217  Sum_probs=214.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. .++.++++|++|.++++++++++.+.++++|+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            37999999999999999999999999999999998888888777543 46889999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc-CCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ||||||....  ...++.+.+.++|.+.+++|+.+++.+.+.++|.|. +++.|+||++||..+..+.++...|+++|+|
T Consensus        80 li~naG~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa  157 (259)
T PRK08340         80 LVWNAGNVRC--EPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAG  157 (259)
T ss_pred             EEECCCCCCC--CccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHH
Confidence            9999997532  124567788999999999999999999999999886 3567999999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH-HHHHhhhhcccCCCCCHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM-EELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++++++++.|++++||+||+|+||+++|++.+...........     ...++.+ .....  ..|.+|+.+|+|+|++
T Consensus       158 ~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~p~~r~~~p~dva~~  230 (259)
T PRK08340        158 LVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERG-----VSFEETWEREVLE--RTPLKRTGRWEELGSL  230 (259)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccC-----CchHHHHHHHHhc--cCCccCCCCHHHHHHH
Confidence            99999999999999999999999999999987643221110000     0011111 12222  3467889999999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCcccccc
Q 040531          254 ALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      ++||++++++++||+++.+|||+...-|
T Consensus       231 ~~fL~s~~~~~itG~~i~vdgg~~~~~~  258 (259)
T PRK08340        231 IAFLLSENAEYMLGSTIVFDGAMTRGVN  258 (259)
T ss_pred             HHHHcCcccccccCceEeecCCcCCCCC
Confidence            9999999999999999999999876544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-44  Score=308.02  Aligned_cols=249  Identities=31%  Similarity=0.494  Sum_probs=215.6

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+ +..++..+.+.+.+.++.++++|+++.++++++++++.+
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3356899999999999999999999999999999999998 555566555555566789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|
T Consensus        88 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (258)
T PRK06935         88 EFGKIDILVNNAGTIRR----APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAY  163 (258)
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhh
Confidence            99999999999998643    56778889999999999999999999999999988888999999999988888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|++++++++++|+.++||+||+|+||+++|++.+.....           .   +.......  ..+.++..+|+
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~~~~  227 (258)
T PRK06935        164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----------K---NRNDEILK--RIPAGRWGEPD  227 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----------h---HHHHHHHh--cCCCCCCCCHH
Confidence            99999999999999999999999999999999999986432110           1   11112222  24678899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++.++||+++.+.+++|+++.+|||+..
T Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        228 DLMGAAVFLASRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             HHHHHHHHHcChhhcCCCCCEEEECCCeec
Confidence            999999999999999999999999999765

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-44  Score=306.45  Aligned_cols=252  Identities=40%  Similarity=0.614  Sum_probs=220.6

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.+.+.++.++.+|+++.+++.++++.+.+
T Consensus         1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999888888777766667899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||+|.....   .++.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.++...|
T Consensus        81 ~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y  157 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQ---GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIY  157 (253)
T ss_pred             HhCCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchh
Confidence            999999999999975432   45677899999999999999999999999999987778999999999999898999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++++++++.|+.++||+|++|+||+++|++.......             ..+. .+.+.. ..+.++..+|+
T Consensus       158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~-------------~~~~-~~~~~~-~~~~~~~~~p~  222 (253)
T PRK06172        158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA-------------DPRK-AEFAAA-MHPVGRIGKVE  222 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc-------------ChHH-HHHHhc-cCCCCCccCHH
Confidence            99999999999999999999999999999999999987643221             0111 111111 24667889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++.++||+++.+.+++|++|.+|||+++
T Consensus       223 ~ia~~~~~l~~~~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        223 EVASAVLYLCSDGASFTTGHALMVDGGATA  252 (253)
T ss_pred             HHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            999999999999999999999999999864

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-44  Score=313.48  Aligned_cols=240  Identities=31%  Similarity=0.514  Sum_probs=209.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---------hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD---------AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      .+++|++|||||++|||++++++|+++|++|++++++.         +.+++..+++.+.+.++.++++|++|.+++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            57899999999999999999999999999999998876         667777777766667788999999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC------CceEEEEccc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR------SGCIISTASV  156 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~ii~vss~  156 (285)
                      ++++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|+++.      .|+||++||.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~  158 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRD----RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG  158 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence            99999999999999999998643    5678899999999999999999999999999986532      3799999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          157 ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       157 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .+..+.++...|+++|+|+++|+++++.|++++||+||+|+|| +.|++......                    .....
T Consensus       159 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~--------------------~~~~~  217 (286)
T PRK07791        159 AGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA--------------------EMMAK  217 (286)
T ss_pred             hhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH--------------------HHHhc
Confidence            9999999999999999999999999999999999999999999 88887532211                    11111


Q ss_pred             hhcccC--CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          237 LANLKG--VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       237 ~~~~~~--~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        .+.+  +..+|||+|++++||+++.+.+++|++|.+|||+..
T Consensus       218 --~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        218 --PEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             --CcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence              1222  356999999999999999999999999999999875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.8e-44  Score=305.67  Aligned_cols=246  Identities=28%  Similarity=0.448  Sum_probs=210.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++||+++||||++|||++++++|+++|++|++++++..  .+..+.+.+.+.++.++++|++|.++++++++++.+++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999998877543  34444554445678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|+
T Consensus        84 ~~~D~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (253)
T PRK08993         84 GHIDILVNNAGLIRR----EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYT  159 (253)
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchH
Confidence            999999999998543    4577889999999999999999999999999997664 58999999998888888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++++++++.|+.++||+||+|+||+++|++.....+.              .+.......  ..|.+++.+|+|
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~--------------~~~~~~~~~--~~p~~r~~~p~e  223 (253)
T PRK08993        160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD--------------EQRSAEILD--RIPAGRWGLPSD  223 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc--------------hHHHHHHHh--cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999986542110              011112222  246788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+.++||+++.+.+++|+++.+|||+..
T Consensus       224 va~~~~~l~s~~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        224 LMGPVVFLASSASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             HHHHHHHHhCccccCccCcEEEECCCEec
Confidence            99999999999999999999999999764

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=7.5e-44  Score=305.36  Aligned_cols=247  Identities=35%  Similarity=0.489  Sum_probs=209.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+|++|++|||||++|||++++++|+++|++|++++|+.+..           .++.+++||+++.++++++++++.++
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999876542           25788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        70 ~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  145 (258)
T PRK06398         70 YGRIDILVNNAGIESY----GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYV  145 (258)
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhh
Confidence            9999999999998533    577888999999999999999999999999999877789999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++++++++.|+.++ |+||+|+||+++|++.........    ...+ ....+....+..  ..+.+++.+|+|
T Consensus       146 ~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~----~~~~-~~~~~~~~~~~~--~~~~~~~~~p~e  217 (258)
T PRK06398        146 TSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEV----GKDP-EHVERKIREWGE--MHPMKRVGKPEE  217 (258)
T ss_pred             hhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccc----cCCh-hhhHHHHHhhhh--cCCcCCCcCHHH
Confidence            99999999999999999986 999999999999998764321100    0000 001111111111  246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.+.+++|+++.+|||++..
T Consensus       218 va~~~~~l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        218 VAYVVAFLASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             HHHHHHHHcCcccCCCCCcEEEECCccccC
Confidence            999999999999999999999999998765

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-43  Score=302.11  Aligned_cols=243  Identities=27%  Similarity=0.342  Sum_probs=206.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH--
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK--   89 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~--   89 (285)
                      +++|+++||||++|||++++++|+++|++|++++ ++.+..++...++.+.+.++..+++|+++.+++..+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 5566666666677655667888999999999999999888753  


Q ss_pred             --cC--CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           90 --HG--RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        90 --~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                        ++  ++|+||||||....    .++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||..+..+.++.
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  155 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPG----AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDF  155 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCc
Confidence              34  89999999997532    46778899999999999999999999999999954  4899999999999888889


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++++++++.|++++||+||+|+||+|+|++.......            .   ........ ..+.+++.
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~------------~---~~~~~~~~-~~~~~~~~  219 (252)
T PRK12747        156 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD------------P---MMKQYATT-ISAFNRLG  219 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC------------H---HHHHHHHh-cCcccCCC
Confidence            99999999999999999999999999999999999999986543211            0   11111111 23567889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+|+|+++.||+++.+.+++|+.+.+|||+.
T Consensus       220 ~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        220 EVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             CHHHHHHHHHHHcCccccCcCCcEEEecCCcc
Confidence            99999999999999999999999999999975

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-43  Score=302.98  Aligned_cols=249  Identities=32%  Similarity=0.425  Sum_probs=219.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+.+.+.++.++++|++|.++++++++.+.+.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35889999999999999999999999999999999999988888877776656778999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.++...|++
T Consensus        86 ~~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~  161 (255)
T PRK07523         86 GPIDILVNNAGMQFR----TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTA  161 (255)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHH
Confidence            999999999998643    5778889999999999999999999999999998777899999999988888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.++++++.|++++||+||+|+||+++|++.......               ..+...+.. ..+.+++.+|+|+
T Consensus       162 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~dv  225 (255)
T PRK07523        162 TKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD---------------PEFSAWLEK-RTPAGRWGKVEEL  225 (255)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC---------------HHHHHHHHh-cCCCCCCcCHHHH
Confidence            999999999999999999999999999999999986543211               111112221 2467888999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |++++||+++++.+++|+.|.+|||+..+
T Consensus       226 a~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        226 VGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            99999999999999999999999998765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-44  Score=306.75  Aligned_cols=255  Identities=30%  Similarity=0.422  Sum_probs=209.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+   ..++.++++|+++.++++.+++++.+.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999988877666554   4468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHH----HHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANE----FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      +++|+||||||+....   .++.+.+.++    |++++++|+.+++.++++++|.|+++ .|+||+++|..+..+.++..
T Consensus        79 g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~  154 (263)
T PRK06200         79 GKLDCFVGNAGIWDYN---TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGP  154 (263)
T ss_pred             CCCCEEEECCCCcccC---CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCc
Confidence            9999999999975321   3455566655    88999999999999999999998654 58999999999988888888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+++|+++++.|+++. |+||+|+||+|+|++........    .. ......++..+.. .. ..|.+++.+
T Consensus       155 ~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~----~~-~~~~~~~~~~~~~-~~-~~p~~r~~~  226 (263)
T PRK06200        155 LYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQ----GE-TSISDSPGLADMI-AA-ITPLQFAPQ  226 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCC----CC-cccccccchhHHh-hc-CCCCCCCCC
Confidence            99999999999999999999985 99999999999999854221100    00 0000001111111 11 247789999


Q ss_pred             HHHHHHHHHHHhcCC-CCcccccEEEecCCccccc
Q 040531          247 ARDIAEAALYLASDE-SKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       247 ~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++++||+++. +.|+||+.|.+|||++..+
T Consensus       227 ~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        227 PEDHTGPYVLLASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             HHHHhhhhhheecccccCcccceEEEEcCceeecc
Confidence            999999999999998 9999999999999987654

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-43  Score=301.35  Aligned_cols=249  Identities=33%  Similarity=0.477  Sum_probs=218.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888888887665667888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|++++.++|+++||..+..+.++.+.|+
T Consensus        83 ~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  159 (252)
T PRK07035         83 HGRLDILVNNAAANPY---FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYS  159 (252)
T ss_pred             cCCCCEEEECCCcCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchH
Confidence            9999999999997422   2566778999999999999999999999999999887789999999998888888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+++++++++++.|+.++||+|++|+||+|+|++.......              .+.......  ..+.++..+|+|
T Consensus       160 ~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~~~~  223 (252)
T PRK07035        160 ITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN--------------DAILKQALA--HIPLRRHAEPSE  223 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC--------------HHHHHHHHc--cCCCCCcCCHHH
Confidence            9999999999999999999999999999999999986543211              111222222  235678899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+.++||+++.+.+++|+++.+|||++
T Consensus       224 va~~~~~l~~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        224 MAGAVLYLASDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             HHHHHHHHhCccccCccCCEEEeCCCcC
Confidence            9999999999999999999999999975

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-43  Score=307.50  Aligned_cols=246  Identities=24%  Similarity=0.313  Sum_probs=208.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+++|++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+.+.+.++.++++|+++.+++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999988653  3444555555444567889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.++...|+
T Consensus       126 ~g~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~  200 (294)
T PRK07985        126 LGGLDIMALVAGKQVA---IPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_pred             hCCCCEEEECCCCCcC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhH
Confidence            9999999999997432   146778899999999999999999999999999853  48999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|++++++.++.|++++||+||+|+||+|+|++......              ..+.......  ..+.++..+|+|
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~--------------~~~~~~~~~~--~~~~~r~~~ped  264 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--------------TQDKIPQFGQ--QTPMKRAGQPAE  264 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC--------------CHHHHHHHhc--cCCCCCCCCHHH
Confidence            999999999999999999999999999999999998532100              0111112222  246778899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+++++.+++|+.|.+|||++.
T Consensus       265 va~~~~fL~s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        265 LAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             HHHHHHhhhChhcCCccccEEeeCCCeeC
Confidence            99999999999999999999999999864

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=8.8e-43  Score=296.75  Aligned_cols=245  Identities=31%  Similarity=0.471  Sum_probs=209.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|++|||||++|||++++++|+++|++|++++|+..  .+..+.+.+.+.++.++++|+++.+++..+++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999998653  344444444456789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      ++|++|||||....    .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+....|++
T Consensus        80 ~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  155 (248)
T TIGR01832        80 HIDILVNNAGIIRR----ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTA  155 (248)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHH
Confidence            99999999998643    4567788999999999999999999999999997665 689999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|++++++++++|+.++||+||+|+||+++|++.+.....           .   +.......  ..+.+++.+|+|+
T Consensus       156 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~~~~dv  219 (248)
T TIGR01832       156 SKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-----------E---DRNAAILE--RIPAGRWGTPDDI  219 (248)
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-----------h---HHHHHHHh--cCCCCCCcCHHHH
Confidence            999999999999999999999999999999999986532110           0   11112222  2356788999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++||+++.+.+++|+++.+|||+..
T Consensus       220 a~~~~~l~s~~~~~~~G~~i~~dgg~~~  247 (248)
T TIGR01832       220 GGPAVFLASSASDYVNGYTLAVDGGWLA  247 (248)
T ss_pred             HHHHHHHcCccccCcCCcEEEeCCCEec
Confidence            9999999999999999999999999753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=8.5e-43  Score=302.19  Aligned_cols=261  Identities=50%  Similarity=0.838  Sum_probs=215.7

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+...+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++. ...++.++++|++|.++++++++.+.
T Consensus        11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHH
Confidence            34556889999999999999999999999999999999998877776666653 24578899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+++++++.|.+++.|+||+++|..+..+.++...
T Consensus        90 ~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~  167 (280)
T PLN02253         90 DKFGTLDIMVNNAGLTGPP--CPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHA  167 (280)
T ss_pred             HHhCCCCEEEECCCcCCCC--CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcc
Confidence            9999999999999975321  13577889999999999999999999999999998777899999999998888888889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHH---HHHhhhhcccCCC
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME---ELVRGLANLKGVT  244 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  244 (285)
                      |+++|+|+++++++++.|++++||+||+++||.++|++.....+..          ....+.+.   ..........++.
T Consensus       168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~~  237 (280)
T PLN02253        168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPED----------ERTEDALAGFRAFAGKNANLKGVE  237 (280)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccc----------cchhhhhhhhHHHhhcCCCCcCCC
Confidence            9999999999999999999999999999999999999754322110          00011111   1111111122456


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      .+|+|+|++++||+++.+.|++|++|.+|||++....
T Consensus       238 ~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        238 LTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             CCHHHHHHHHHhhcCcccccccCcEEEECCchhhccc
Confidence            7999999999999999999999999999999876543

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=7.8e-43  Score=305.41  Aligned_cols=249  Identities=28%  Similarity=0.371  Sum_probs=211.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch--hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA--AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +..|++|++|||||++|||++++++|+++|++|++++++.+  ..++..+.+.+.+.++.++++|+++.++++++++++.
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999887543  3445555555556678899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.++...
T Consensus       130 ~~~g~iD~lV~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~  204 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAV---KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLD  204 (300)
T ss_pred             HHhCCCCEEEECCcccCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchh
Confidence            9999999999999975332   56778899999999999999999999999999853  479999999999888888899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|+|+++|+++++.|+.++||+||+|+||+++|++......              ..+....+..  ..+.++..+|
T Consensus       205 Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~--------------~~~~~~~~~~--~~p~~r~~~p  268 (300)
T PRK06128        205 YASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ--------------PPEKIPDFGS--ETPMKRPGQP  268 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC--------------CHHHHHHHhc--CCCCCCCcCH
Confidence            99999999999999999999999999999999999998542110              0112222211  3577889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|.+++||+++.+.+++|+.|.+|||+..+
T Consensus       269 ~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~~  300 (300)
T PRK06128        269 VEMAPLYVLLASQESSYVTGEVFGVTGGLLLS  300 (300)
T ss_pred             HHHHHHHHHHhCccccCccCcEEeeCCCEeCc
Confidence            99999999999999999999999999998653

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-43  Score=299.34  Aligned_cols=255  Identities=26%  Similarity=0.317  Sum_probs=214.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .|++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++++|+++.++++.+++    
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~----   77 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA----   77 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH----
Confidence            45789999999999999999999999999999999999998888877777543 4568899999999999988765    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||+|....    .++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||+++|..+..+.+.+..|
T Consensus        78 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  153 (259)
T PRK06125         78 EAGDIDILVNNAGAIPG----GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICG  153 (259)
T ss_pred             HhCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHh
Confidence            35789999999998633    57788999999999999999999999999999987777899999999888888888899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++++++++.|+.++||+||+|+||+++|++..........     .. ....+.+.....  ..+.+++.+|+
T Consensus       154 ~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-----~~-~~~~~~~~~~~~--~~~~~~~~~~~  225 (259)
T PRK06125        154 SAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRAR-----AE-LGDESRWQELLA--GLPLGRPATPE  225 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhh-----cc-cCCHHHHHHHhc--cCCcCCCcCHH
Confidence            99999999999999999999999999999999999976543321000     00 001122222222  23567888999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++||+++.+.+++|+.|.+|||+++.+
T Consensus       226 ~va~~~~~l~~~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        226 EVADLVAFLASPRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             HHHHHHHHHcCchhccccCceEEecCCeeecC
Confidence            99999999999999999999999999987654

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.7e-42  Score=296.38  Aligned_cols=253  Identities=30%  Similarity=0.463  Sum_probs=215.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++...++.+.+.++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999998888888777765566788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      ++|||||+...    .++.+.+.++|++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|+
T Consensus        82 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  157 (256)
T PRK08643         82 VVVNNAGVAPT----TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKF  157 (256)
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHH
Confidence            99999997543    5677889999999999999999999999999987654 589999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++.+++.++.|+.++||+||+|+||+++|++..........     ...............  ..+.+++.+|||+|+.
T Consensus       158 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~  230 (256)
T PRK08643        158 AVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGE-----NAGKPDEWGMEQFAK--DITLGRLSEPEDVANC  230 (256)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhcc-----ccCCCchHHHHHHhc--cCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999997653221000     000000001111222  2367788899999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccc
Q 040531          254 ALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++||+++.+.+++|++|.+|||++.
T Consensus       231 ~~~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        231 VSFLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             HHHHhCccccCccCcEEEeCCCeec
Confidence            9999999999999999999999875

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-42  Score=297.34  Aligned_cols=241  Identities=29%  Similarity=0.381  Sum_probs=207.8

Q ss_pred             ccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecC-----------chhhHHHHHHhhcCCCceEEEeccCCCHH
Q 040531           11 KTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADID-----------DAAGIALADSLLSSSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        11 ~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~D~s~~~   77 (285)
                      ..++||+++||||+  +|||+++|++|+++|++|++++|+           .+...+..+++.+.+.++.++++|+++.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46899999999999  599999999999999999987542           22333445555555678899999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ++.++++++.+.++++|++|||||....    .++.+.+.++|++.+++|+.+++.+.++++|.|.++..|+||++||..
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~  157 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTN----NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQ  157 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence            9999999999999999999999997543    567889999999999999999999999999999877789999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          158 SLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       158 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      +..+.++...|+++|+|+++|+++++.|++++||+||+|+||+++|++....                   ..+....  
T Consensus       158 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-------------------~~~~~~~--  216 (256)
T PRK12859        158 FQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-------------------IKQGLLP--  216 (256)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-------------------HHHHHHh--
Confidence            9888889999999999999999999999999999999999999999863211                   1111111  


Q ss_pred             hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       238 ~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ..+.++..+|+|+|+.++||+++.+.+++|++|.+|||+
T Consensus       217 ~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        217 MFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            235677889999999999999999999999999999996

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-42  Score=297.58  Aligned_cols=246  Identities=34%  Similarity=0.532  Sum_probs=205.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.+++|+++||||++|||++++++|+++|++|++++++.+...   +.+.+.  ++.++++|++|.++++++++++.+.
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999998877654322   222221  4788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-CCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-GGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~~~~~~~Y  168 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+.. +.++...|
T Consensus        77 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  152 (255)
T PRK06463         77 FGRVDVLVNNAGIMYL----MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFY  152 (255)
T ss_pred             cCCCCEEEECCCcCCC----CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHh
Confidence            9999999999998533    567788999999999999999999999999999877789999999988764 34677889


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......           +...+..+....  ..+.+++.+|+
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~  219 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ-----------EEAEKLRELFRN--KTVLKTTGKPE  219 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc-----------cchHHHHHHHHh--CCCcCCCcCHH
Confidence            99999999999999999999999999999999999987532111           111111111111  24677888999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+|+.++||+++.+.+++|+.+.+|||..
T Consensus       220 ~va~~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        220 DIANIVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             HHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            99999999999999999999999999975

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=296.79  Aligned_cols=253  Identities=31%  Similarity=0.447  Sum_probs=216.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..++++|+++||||++|||++++++|+++|+.|++++|+. +......+.+...+.++.++++|+++.+++.++++.+.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988854 445556666655566788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .++++|++|||||....    .++.+.+.++|++.+++|+.+++.+++.+++.|.++. .|+||++||..+..+.++...
T Consensus        82 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  157 (261)
T PRK08936         82 EFGTLDVMINNAGIENA----VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVH  157 (261)
T ss_pred             HcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcc
Confidence            99999999999997643    4677789999999999999999999999999997654 689999999988888888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|+|+++++++++.|+.++||+|++|+||+++|++....+..           .   +.......  ..+.+++.+|
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~~~  221 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-----------P---KQRADVES--MIPMGYIGKP  221 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-----------H---HHHHHHHh--cCCCCCCcCH
Confidence            999999999999999999999999999999999999986532111           1   11111111  2467888999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +|+++.++||+++.+.+++|+++.+|||+....++
T Consensus       222 ~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~~~~  256 (261)
T PRK08936        222 EEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_pred             HHHHHHHHHHcCcccCCccCcEEEECCCcccCccc
Confidence            99999999999999999999999999999866543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.1e-43  Score=305.16  Aligned_cols=251  Identities=22%  Similarity=0.218  Sum_probs=195.8

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh----------cCCC-----ceEEEec
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL----------SSSP-----LVTYLHC   71 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~----------~~~~-----~v~~~~~   71 (285)
                      ++.+++||+++||||+  +|||+++|++|+++|++|++.++.+ .+........          ..+.     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            5668999999999996  9999999999999999999987541 1111111100          0011     1112233


Q ss_pred             cCCCH------------------HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHH
Q 040531           72 DVSLE------------------QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL  133 (285)
Q Consensus        72 D~s~~------------------~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  133 (285)
                      |+++.                  ++++++++++.+++|++|+||||||....  ...++.+.+.++|++.+++|+.+++.
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~--~~~~~~~~~~e~~~~~~~vNl~g~~~  158 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE--ISKPLLETSRKGYLAALSTSSYSFVS  158 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc--cCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            33333                  46899999999999999999999986431  12578899999999999999999999


Q ss_pred             HHHHHHHhhcCCCCceEEEEcccccccCCCCCc-cchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhhc
Q 040531          134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAWK  211 (285)
Q Consensus       134 l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~-~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~~  211 (285)
                      ++++++|.|++  .|+||+++|..+..+.|++. .|+++|+|+++|+++|+.|+++ +|||||+|+||+++|++......
T Consensus       159 l~~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~  236 (299)
T PRK06300        159 LLSHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF  236 (299)
T ss_pred             HHHHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc
Confidence            99999999964  48999999998888888765 8999999999999999999987 59999999999999998643210


Q ss_pred             ccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          212 SCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                                  .  .+.......  ..+.++..+|+|+++.++||+++.+.++||+++.+|||++..+
T Consensus       237 ------------~--~~~~~~~~~--~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  289 (299)
T PRK06300        237 ------------I--ERMVDYYQD--WAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMG  289 (299)
T ss_pred             ------------c--HHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceec
Confidence                        0  011111111  2467888999999999999999999999999999999987743

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-43  Score=305.25  Aligned_cols=248  Identities=19%  Similarity=0.253  Sum_probs=200.5

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc----------hhhHHHHHHhhcCCCceEEEeccCCCHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD----------AAGIALADSLLSSSPLVTYLHCDVSLEQD   78 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~----------~~~~~~~~~~~~~~~~v~~~~~D~s~~~~   78 (285)
                      +|.+|++|+++||||++|||+++|++|+++|++|++++|+.          +.++++.+.+.+.+.++.++++|+++.++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            35678999999999999999999999999999999999974          34555566665555678899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECC-CCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           79 IQNLINVTISKHGRLDILFNNA-GVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ++++++++.+.++++|++|||| |.........++.+.+.++|.+.+++|+.+++.++++++|.|.+++.|+||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 752110112467788899999999999999999999999999877779999999976


Q ss_pred             ccc---CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH
Q 040531          158 SLM---GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV  234 (285)
Q Consensus       158 ~~~---~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                      +..   +.++...|+++|+|+.+|+++|+.|++++||+||+|+||+|+|++........          +   +.+.+..
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~----------~---~~~~~~~  228 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVT----------E---ENWRDAL  228 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccC----------c---cchhhhh
Confidence            543   23456789999999999999999999999999999999999999864321100          0   0011111


Q ss_pred             hhhhcc-cCCCCCHHHHHHHHHHHhcCCC-CcccccEEE
Q 040531          235 RGLANL-KGVTLKARDIAEAALYLASDES-KYISGHNLV  271 (285)
Q Consensus       235 ~~~~~~-~~~~~~~eeva~~~~~l~s~~~-~~~~G~~i~  271 (285)
                      .  ..| .++..+|||+|++++||+++.. .++||++|.
T Consensus       229 ~--~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        229 A--KEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             c--cccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            1  123 3566789999999999999874 699999876

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=3.6e-43  Score=301.73  Aligned_cols=254  Identities=29%  Similarity=0.435  Sum_probs=205.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+..   +.++.++++|+++.++++++++++.+.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH---GDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc---CCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999887766654322   4568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCC----HHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFD----ANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      +++|+||||||.....   .++.+.+    .++|++.+++|+.+++.++++++|.|.++ .|++|+++|..+..+.++..
T Consensus        78 g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~  153 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYS---TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGP  153 (262)
T ss_pred             CCCCEEEECCCCCccC---CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCc
Confidence            9999999999975321   2333333    25799999999999999999999999755 48899999998888888888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+++|+++++.|++++ |+||+|+||+++|++........    .. .....  ....+.... ..|.+|+.+
T Consensus       154 ~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~----~~-~~~~~--~~~~~~~~~-~~p~~r~~~  224 (262)
T TIGR03325       154 LYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGM----AD-KSIST--VPLGDMLKS-VLPIGRMPD  224 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcccccccc----cc-ccccc--cchhhhhhh-cCCCCCCCC
Confidence            99999999999999999999987 99999999999999864311000    00 00000  001121221 246889999


Q ss_pred             HHHHHHHHHHHhcC-CCCcccccEEEecCCccccc
Q 040531          247 ARDIAEAALYLASD-ESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       247 ~eeva~~~~~l~s~-~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|+|++++||+++ .+.++||++|.+|||+....
T Consensus       225 p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~~~  259 (262)
T TIGR03325       225 AEEYTGAYVFFATRGDTVPATGAVLNYDGGMGVRG  259 (262)
T ss_pred             hHHhhhheeeeecCCCcccccceEEEecCCeeecc
Confidence            99999999999997 46789999999999987654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.5e-42  Score=295.65  Aligned_cols=252  Identities=28%  Similarity=0.396  Sum_probs=220.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|+++.+++.++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            355789999999999999999999999999999999999998888887777554  457899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++..
T Consensus        83 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~  158 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIR----KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGA  158 (257)
T ss_pred             HHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCc
Confidence            9999999999999997532    567788999999999999999999999999999877789999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|++++.++++++.|+.++||++|+|+||+++|++.......              .+.......  ..+.++..+
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~  222 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--------------PDYYEQVIE--RTPMRRVGE  222 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--------------hHHHHHHHh--cCCCCCCcC
Confidence            9999999999999999999999999999999999999986543211              112222222  246678889


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++++||+++.+.+++|+.+.+|||+...+
T Consensus       223 ~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~~~~  256 (257)
T PRK09242        223 PEEVAAAVAFLCMPAASYITGQCIAVDGGFLRYG  256 (257)
T ss_pred             HHHHHHHHHHHhCcccccccCCEEEECCCeEeec
Confidence            9999999999999988999999999999987653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=6.9e-43  Score=292.98  Aligned_cols=226  Identities=23%  Similarity=0.303  Sum_probs=202.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..++++++||||||+|||+++|++|+++|++|+++.|+.+++.++.+++.+. +.++.++++|+++.+++.++.+++.+.
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999999999999999764 467999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ...||+||||||+...    +++.+.++++.++++++|+.+++.+.++++|.|.+++.|.||+++|.++..+.|..+.|+
T Consensus        82 ~~~IdvLVNNAG~g~~----g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~  157 (265)
T COG0300          82 GGPIDVLVNNAGFGTF----GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYS  157 (265)
T ss_pred             CCcccEEEECCCcCCc----cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHH
Confidence            8899999999999654    789999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+++.+|+++|+.|+++.||+|.+++||+|.|++.......                .      ....+.....+||+
T Consensus       158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~----------------~------~~~~~~~~~~~~~~  215 (265)
T COG0300         158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSD----------------V------YLLSPGELVLSPED  215 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccc----------------c------ccccchhhccCHHH
Confidence            9999999999999999999999999999999999987511000                0      00112334679999


Q ss_pred             HHHHHHHHhcCCC
Q 040531          250 IAEAALYLASDES  262 (285)
Q Consensus       250 va~~~~~l~s~~~  262 (285)
                      +|+.++..+....
T Consensus       216 va~~~~~~l~~~k  228 (265)
T COG0300         216 VAEAALKALEKGK  228 (265)
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999886543

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-42  Score=294.88  Aligned_cols=249  Identities=39%  Similarity=0.538  Sum_probs=213.4

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +...++++++|++|||||+++||++++++|+++|++|++++|+.+. .+..+++.  ..++.++++|+++.+++++++++
T Consensus         6 ~~~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   82 (255)
T PRK06841          6 QFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAA   82 (255)
T ss_pred             cchhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHH
Confidence            3445567899999999999999999999999999999999998764 33333332  34577899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|++|||||....    .++.+.+.++|++.+++|+.+++.+++.+.+.|++++.++||++||..+..+.+..
T Consensus        83 ~~~~~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  158 (255)
T PRK06841         83 VISAFGRIDILVNSAGVALL----APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH  158 (255)
T ss_pred             HHHHhCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC
Confidence            99999999999999998643    56677889999999999999999999999999987778999999999988898999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++++++++.|++++||++|+|+||+|+|++....+..            .   .......  ..+.+++.
T Consensus       159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------------~---~~~~~~~--~~~~~~~~  221 (255)
T PRK06841        159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG------------E---KGERAKK--LIPAGRFA  221 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch------------h---HHHHHHh--cCCCCCCc
Confidence            99999999999999999999999999999999999999986543211            1   1111222  24667889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+++.+++|+++.+.+++|+.+.+|||++.
T Consensus       222 ~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        222 YPEEIAAAALFLASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECCCccC
Confidence            999999999999999999999999999999864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=5.6e-42  Score=293.17  Aligned_cols=248  Identities=31%  Similarity=0.431  Sum_probs=215.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++.+.+.++.++.+|+++.+++.++++.+.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988888777777655667889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....    .++ +.+.++|++.+++|+.+++.++++++|.|.+.+.++||++||..+..+.++...|+
T Consensus        86 ~~~~d~li~~ag~~~~----~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  160 (255)
T PRK06113         86 LGKVDILVNNAGGGGP----KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_pred             cCCCCEEEECCCCCCC----CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhH
Confidence            9999999999997543    233 57889999999999999999999999999777778999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++++++++.|+.++||+||+|+||+++|++.......               +.......  ..+.++..+|+|
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~d  223 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---------------EIEQKMLQ--HTPIRRLGQPQD  223 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCH---------------HHHHHHHh--cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999986542111               11111222  235677889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++++++||+++.+.+++|+.|.+|||....
T Consensus       224 ~a~~~~~l~~~~~~~~~G~~i~~~gg~~~~  253 (255)
T PRK06113        224 IANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCCcccc
Confidence            999999999999999999999999997654

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-42  Score=293.99  Aligned_cols=258  Identities=25%  Similarity=0.346  Sum_probs=208.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +...|++|++|||||++|||++++++|+++|++|++++|+.. ..+..+++...+.++.++++|+++.+++.++++++.+
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            344588999999999999999999999999999999999753 4555566655566788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+.  .++...|
T Consensus        81 ~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y  155 (260)
T PRK12823         81 AFGRIDVLINNVGGTIW---AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPY  155 (260)
T ss_pred             HcCCCeEEEECCccccC---CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCcc
Confidence            99999999999996421   256778899999999999999999999999999987778899999998664  2345789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|++.|+++++.|++++||+||+|+||+|+|++....... .. . .........+.......  ..+.++..+|+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  230 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNA-AP-Q-SEQEKAWYQQIVDQTLD--SSLMKRYGTID  230 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhh-cc-c-cccccccHHHHHHHHhc--cCCcccCCCHH
Confidence            99999999999999999999999999999999999864321000 00 0 00000011122222222  34678888999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+|++++||+++.+.+++|+.+.+|||..
T Consensus       231 dva~~~~~l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        231 EQVAAILFLASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HHHHHHHHHcCcccccccCcEEeecCCCC
Confidence            99999999999999999999999999863

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-42  Score=294.09  Aligned_cols=255  Identities=36%  Similarity=0.504  Sum_probs=213.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.. ..+..+++.+.+.++.++++|+++.++++++++++.+++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999875 444555555445678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc-ccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS-LMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~-~~~~~~~~~Y~  169 (285)
                      +++|++|||||....    .++.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||..+ ..+.++...|+
T Consensus        81 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  156 (263)
T PRK08226         81 GRIDILVNNAGVCRL----GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYA  156 (263)
T ss_pred             CCCCEEEECCCcCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHH
Confidence            999999999998543    5677888999999999999999999999999987777789999999776 35667788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+++++++++++.|++++||+|++|+||+++|++........       .+ ....+.+.....  ..|.+++.+|+|
T Consensus       157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~-------~~-~~~~~~~~~~~~--~~p~~~~~~~~~  226 (263)
T PRK08226        157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQS-------NP-EDPESVLTEMAK--AIPLRRLADPLE  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhc-------cC-CCcHHHHHHHhc--cCCCCCCCCHHH
Confidence            99999999999999999999999999999999999876432110       00 001122222222  246778889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|+.++||+++.+.+++|++|.+|||.++..
T Consensus       227 va~~~~~l~~~~~~~~~g~~i~~dgg~~~~~  257 (263)
T PRK08226        227 VGELAAFLASDESSYLTGTQNVIDGGSTLPE  257 (263)
T ss_pred             HHHHHHHHcCchhcCCcCceEeECCCcccCc
Confidence            9999999999999999999999999988653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-42  Score=294.31  Aligned_cols=245  Identities=31%  Similarity=0.503  Sum_probs=212.9

Q ss_pred             ccCCCcEEEEecCCC-chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-C-CceEEEeccCCCHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGAR-GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-S-PLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        11 ~~l~~k~vlItGas~-gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..+++|+++||||++ |||++++++|+++|++|++++|+.+.+++..+.+.+. + .++.++++|+++.++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            356899999999985 9999999999999999999999988887777776542 2 468899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|+.+. .|+|++++|..+..+.++..
T Consensus        93 ~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~  168 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ----TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQA  168 (262)
T ss_pred             HHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCc
Confidence            999999999999997543    5677889999999999999999999999999998766 78999999998888888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+++++++++.|++++||+||+|+||+++|++......               .+..+....  ..+.++..+
T Consensus       169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~---------------~~~~~~~~~--~~~~~r~~~  231 (262)
T PRK07831        169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS---------------AELLDELAA--REAFGRAAE  231 (262)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC---------------HHHHHHHHh--cCCCCCCcC
Confidence            999999999999999999999999999999999999998643211               122222222  246788899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      |+|+|++++||+++.+.++||++|.+|+|+
T Consensus       232 p~~va~~~~~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        232 PWEVANVIAFLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             HHHHHHHHHHHcCchhcCcCCceEEeCCCC
Confidence            999999999999999999999999999975

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-42  Score=293.34  Aligned_cols=242  Identities=29%  Similarity=0.405  Sum_probs=208.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +|++++|++|||||++|||++++++|+++|++|++++|+.+.        ...+.++.++++|+++.++++++++.+.+.
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998754        112456889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++++.+.|.++ +.|+||++||..+..+.++...|
T Consensus        73 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  148 (252)
T PRK07856         73 HGRLDVLVNNAGGSPY----ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAY  148 (252)
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchh
Confidence            9999999999997533    456778899999999999999999999999998764 45899999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+++++|++.++.|++++ |++|+|+||+|+|++....+.+              .+.......  ..+.++..+|+
T Consensus       149 ~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~p~  211 (252)
T PRK07856        149 GAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD--------------AEGIAAVAA--TVPLGRLATPA  211 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC--------------HHHHHHHhh--cCCCCCCcCHH
Confidence            999999999999999999988 9999999999999986543211              111122222  24678889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|+.++||+++.+++++|+.|.+|||+....
T Consensus       212 ~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~~  243 (252)
T PRK07856        212 DIAWACLFLASDLASYVSGANLEVHGGGERPA  243 (252)
T ss_pred             HHHHHHHHHcCcccCCccCCEEEECCCcchHH
Confidence            99999999999999999999999999987644

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-42  Score=292.71  Aligned_cols=249  Identities=29%  Similarity=0.416  Sum_probs=219.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|+++.+++.++++++.+
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999998888888777766667789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||+|....    .++.+.+.++|++.+++|+.+++.+.+.+++.|.+++.+++|++||..+..+.++...|
T Consensus        85 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  160 (256)
T PRK06124         85 EHGRLDILVNNVGARDR----RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVY  160 (256)
T ss_pred             hcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHh
Confidence            99999999999997543    57778899999999999999999999999999987778999999999998888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|++++++.++.|+.+.||++++|+||+++|++......+               +...+.... ..+.+++.+|+
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~  224 (256)
T PRK06124        161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD---------------PAVGPWLAQ-RTPLGRWGRPE  224 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC---------------hHHHHHHHh-cCCCCCCCCHH
Confidence            99999999999999999999999999999999999985432111               111111111 23567788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |++++++||+++.+.+++|+.+.+|||+.
T Consensus       225 ~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        225 EIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             HHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence            99999999999999999999999999976

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-42  Score=292.71  Aligned_cols=255  Identities=32%  Similarity=0.429  Sum_probs=214.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ||.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+   ..++.++++|+++.++++++++++.+.
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998877776655   346888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|++|||||....    .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.++...|
T Consensus        78 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  153 (257)
T PRK07067         78 FGGIDILFNNAALFDM----APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHY  153 (257)
T ss_pred             cCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchh
Confidence            9999999999997643    5677889999999999999999999999999987653 5899999999888888899999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||++++.+++.++.|+.++||++|+|+||+++|++..........    ... ....+.......  ..+.+++.+|+
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~----~~~-~~~~~~~~~~~~--~~~~~~~~~~~  226 (257)
T PRK07067        154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFAR----YEN-RPPGEKKRLVGE--AVPLGRMGVPD  226 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhh----ccC-CCHHHHHHHHhh--cCCCCCccCHH
Confidence            99999999999999999999999999999999999986532111000    000 001111112111  34678899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+++.+.+++|+++++|||...
T Consensus       227 dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        227 DLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            999999999999999999999999999754

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.3e-42  Score=322.21  Aligned_cols=249  Identities=31%  Similarity=0.462  Sum_probs=216.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ...+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++..+++|++|.++++++++++.++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999999999999999999988887776655   45678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||.....   .++.+.+.++|++++++|+.+++.++++++|.|  ++.|+||++||..+..+.++...|+++
T Consensus       343 ~id~li~nAg~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~as  417 (520)
T PRK06484        343 RLDVLVNNAGIAEVF---KPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCAS  417 (520)
T ss_pred             CCCEEEECCCCcCCC---CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHH
Confidence            999999999976322   467788999999999999999999999999999  456899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+++++.|++++||+||+|+||+|+|++.......             ..+......+  ..+.+++.+|+|+|
T Consensus       418 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-------------~~~~~~~~~~--~~~~~~~~~~~dia  482 (520)
T PRK06484        418 KAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-------------GRADFDSIRR--RIPLGRLGDPEEVA  482 (520)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-------------cHHHHHHHHh--cCCCCCCcCHHHHH
Confidence            99999999999999999999999999999999987543211             0111222222  23667889999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccccccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTTSKNCV  283 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  283 (285)
                      +.++||+++.+.+++|+.|.+|||+....+|.
T Consensus       483 ~~~~~l~s~~~~~~~G~~i~vdgg~~~~~~~~  514 (520)
T PRK06484        483 EAIAFLASPAASYVNGATLTVDGGWTAFGDAG  514 (520)
T ss_pred             HHHHHHhCccccCccCcEEEECCCccCCCCCc
Confidence            99999999999999999999999998877763

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=8.5e-42  Score=292.25  Aligned_cols=247  Identities=31%  Similarity=0.406  Sum_probs=214.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|++|||||++|||++++++|+++|++|+++.+ +.+.++...+++...+.++.++++|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988865 5556666667776667789999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhhH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      |+||||+|....    .++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|+++|
T Consensus        82 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  157 (256)
T PRK12743         82 DVLVNNAGAMTK----APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAK  157 (256)
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHH
Confidence            999999998643    4567789999999999999999999999999996553 58999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +++++++++++.++.++||++++|+||+++|++.....                .+.......  ..+.++..+|+|+++
T Consensus       158 ~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~----------------~~~~~~~~~--~~~~~~~~~~~dva~  219 (256)
T PRK12743        158 HALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD----------------SDVKPDSRP--GIPLGRPGDTHEIAS  219 (256)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC----------------hHHHHHHHh--cCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999998854210                011111111  245677889999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccccccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTTSKNCV  283 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  283 (285)
                      .+.||+++.+.+++|+++.+|||+.+..+|+
T Consensus       220 ~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  250 (256)
T PRK12743        220 LVAWLCSEGASYTTGQSLIVDGGFMLANPQF  250 (256)
T ss_pred             HHHHHhCccccCcCCcEEEECCCccccCCcc
Confidence            9999999999999999999999999998886

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=292.40  Aligned_cols=254  Identities=29%  Similarity=0.401  Sum_probs=219.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.+.+.++.++++|+++.++++++++++.+.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999999988888777776656689999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||....    .++.+.+.++|++++++|+.+++.+.+.++|.|++++.++||++||..+..+.++...|++
T Consensus        86 ~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         86 GVIDILVNNAGIIKR----IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence            999999999998644    5677889999999999999999999999999998878899999999988888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|++++++++++|+.++||+|++|.||+++|++.........       . .. ...+.+.... ..+.+++.+|+|+
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-------~-~~-~~~~~~~~~~-~~~~~~~~~~~dv  231 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQA-------D-GS-RHPFDQFIIA-KTPAARWGDPEDL  231 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccc-------c-cc-chhHHHHHHh-cCCccCCcCHHHH
Confidence            99999999999999999999999999999999998654321000       0 00 0111111111 2356778899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+.++||+++.+.+++|+.+.+|||+..
T Consensus       232 a~~~~~l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        232 AGPAVFLASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             HHHHHHHhCcccCCCCCCEEEECCCcee
Confidence            9999999999999999999999999765

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.5e-44  Score=275.30  Aligned_cols=242  Identities=30%  Similarity=0.407  Sum_probs=213.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..++.|+.+++||+..|||++++..|++.|++|+.+.|+++.+..+..+.   ..-+..++.|+++.+.+.+++.    .
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~----~   74 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLV----P   74 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhc----c
Confidence            34789999999999999999999999999999999999999998887765   4558999999999887776654    3


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .+++|.+|||||+...    .|+.+.+.++|+..|++|+++++.+.|...+.+..+ .+|.|+++||.++.++..+...|
T Consensus        75 v~pidgLVNNAgvA~~----~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvY  150 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVATN----HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVY  150 (245)
T ss_pred             cCchhhhhccchhhhc----chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEE
Confidence            4689999999999755    789999999999999999999999999977766544 47889999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++++|++|.|+++++||||++.|..|.|.|.+..|.++..              -..+..  .-|.+|+..++
T Consensus       151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--------------~k~mL~--riPl~rFaEV~  214 (245)
T KOG1207|consen  151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--------------KKKMLD--RIPLKRFAEVD  214 (245)
T ss_pred             eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--------------ccchhh--hCchhhhhHHH
Confidence            99999999999999999999999999999999999999998876321              111222  24788999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+.++++||+|+.++..||.++.++|||+.
T Consensus       215 eVVnA~lfLLSd~ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  215 EVVNAVLFLLSDNSSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             HHHhhheeeeecCcCcccCceeeecCCccC
Confidence            999999999999999999999999999985

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=290.55  Aligned_cols=245  Identities=28%  Similarity=0.396  Sum_probs=209.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ||+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.+.+.++.++++|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            68999999999999999999999999999999998888877777765556789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      ++|||+|....    .++.+.+.++|++.+++|+.+++.+++++++.|.++ ..|+||++||..+..+.++...|+++|+
T Consensus        81 ~lI~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKa  156 (252)
T PRK07677         81 ALINNAAGNFI----CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA  156 (252)
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHH
Confidence            99999986432    567788999999999999999999999999998654 3689999999998888888889999999


Q ss_pred             HHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhh-hhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          174 AIVGLTKNTACELGK-YGIRVNCISPFGVATSML-VNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       174 a~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+++|+++|+.|+.+ +||+||+|+||+++|+.. ...+.              .++..+....  ..+.+++.+|+|++
T Consensus       157 a~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~--------------~~~~~~~~~~--~~~~~~~~~~~~va  220 (252)
T PRK07677        157 GVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE--------------SEEAAKRTIQ--SVPLGRLGTPEEIA  220 (252)
T ss_pred             HHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC--------------CHHHHHHHhc--cCCCCCCCCHHHHH
Confidence            999999999999975 799999999999996432 11111              1112222222  23567889999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +++.||+++.+.+++|+++.+|||+++.
T Consensus       221 ~~~~~l~~~~~~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        221 GLAYFLLSDEAAYINGTCITMDGGQWLN  248 (252)
T ss_pred             HHHHHHcCccccccCCCEEEECCCeecC
Confidence            9999999999999999999999997653

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-42  Score=295.82  Aligned_cols=239  Identities=26%  Similarity=0.352  Sum_probs=197.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++...+.++.++++|++|.+++.++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999997 8999999999988887777777655567889999999999999999988 5688999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------------  162 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------------  162 (285)
                      +||||||+..           ..++|++.+++|+.+++.++++++|.|.+  .+++|+++|..+..+.            
T Consensus        79 ~li~nAG~~~-----------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         79 GLVHTAGVSP-----------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             EEEECCCcCC-----------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccc
Confidence            9999999741           23568999999999999999999999954  3778999998776542            


Q ss_pred             ------------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCch
Q 040531          163 ------------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCE  224 (285)
Q Consensus       163 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                        ++...|++||+|++.+++.++.|++++||+||+|+||+++|++....+..            
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~------------  213 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG------------  213 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC------------
Confidence                              24678999999999999999999999999999999999999986542211            


Q ss_pred             HHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccccccc
Q 040531          225 EEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVG  284 (285)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~~  284 (285)
                      ...+.......  ..|.++..+|||+|++++||+++.++++||+.+.+|||+..+ .|+|
T Consensus       214 ~~~~~~~~~~~--~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~-~~~~  270 (275)
T PRK06940        214 PRGDGYRNMFA--KSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS-YRYG  270 (275)
T ss_pred             CchHHHHHHhh--hCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE-EecC
Confidence            00111122222  246788999999999999999999999999999999998655 4443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-42  Score=295.73  Aligned_cols=255  Identities=31%  Similarity=0.420  Sum_probs=207.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++|++|++|||||++|||++++++|+++|++|++++++.....         ..++.++++|+++.++++++++++.+.+
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999998876532         2367889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCC-----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           91 GRLDILFNNAGVLGNQSK-----HKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +++|++|||||.......     ..++.+.+.++|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.++.
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQ  155 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC
Confidence            999999999997543111     123456789999999999999999999999999988778999999999998888889


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ..|+++|+|+++|+++++.|++++||+||+|+||+++ |++....+... .....   .....+..+.+......|.++.
T Consensus       156 ~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~p~~r~  231 (266)
T PRK06171        156 SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEA-LAYTR---GITVEQLRAGYTKTSTIPLGRS  231 (266)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhh-hcccc---CCCHHHHHhhhcccccccCCCC
Confidence            9999999999999999999999999999999999997 66543221110 00000   0011111122211113477899


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+|+|+|+++.||+++.++++||++|.+|||++.
T Consensus       232 ~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        232 GKLSEVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             CCHHHhhhheeeeeccccccceeeEEEecCcccC
Confidence            9999999999999999999999999999999875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5e-42  Score=289.85  Aligned_cols=199  Identities=30%  Similarity=0.363  Sum_probs=182.8

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-C-ceEEEeccCCCHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-P-LVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~-~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ..+..+.||+|+|||||+|||.++|.+|+++|++++++.|+.++++...+++++.. . ++.+++||++|.+++.+++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            45667899999999999999999999999999999999999999999988886632 3 599999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +...+|++|+||||||+...    ..+.+.+.++++..|++|++|+..++++++|.|++++.|+||++||++++.+.|..
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~----~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~  160 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLV----GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR  160 (282)
T ss_pred             HHHhcCCCCEEEecCccccc----cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence            99999999999999999753    67788899999999999999999999999999998888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCC--cEEEEEeCCCccchhhhhhhc
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYG--IRVNCISPFGVATSMLVNAWK  211 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~  211 (285)
                      +.|++||+|+++|+++|+.|+.+++  |++ +|+||+|+|++......
T Consensus       161 ~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~  207 (282)
T KOG1205|consen  161 SIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELL  207 (282)
T ss_pred             cccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhc
Confidence            9999999999999999999999877  566 99999999998765543

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-41  Score=290.15  Aligned_cols=255  Identities=25%  Similarity=0.301  Sum_probs=215.9

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +||++++|+++||||++|||++++++|+++|++|++++|+.+.++...+.+.+.+.++.++++|+++.++++++++++.+
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998887777666655556778899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|+++ .|+|+++||..+..+.++...|
T Consensus        83 ~~~~iD~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y  157 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFP----APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHV  157 (264)
T ss_pred             HcCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHH
Confidence            99999999999986533    467788999999999999999999999999998644 5899999999888888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      +++|+|+++|+++++.|+.++||++++|+||+++ |+......+.               +........ ..+.++..+|
T Consensus       158 ~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~  221 (264)
T PRK07576        158 CAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS---------------PELQAAVAQ-SVPLKRNGTK  221 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC---------------HHHHHHHHh-cCCCCCCCCH
Confidence            9999999999999999999999999999999997 5543221110               111111111 2456778899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccccccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVG  284 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~~  284 (285)
                      +|+|+.++||+++.+.+++|+++.+|||+.+.+--+|
T Consensus       222 ~dva~~~~~l~~~~~~~~~G~~~~~~gg~~~~~~~~~  258 (264)
T PRK07576        222 QDIANAALFLASDMASYITGVVLPVDGGWSLGGASIA  258 (264)
T ss_pred             HHHHHHHHHHcChhhcCccCCEEEECCCcccCchHHH
Confidence            9999999999999889999999999999976554333

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-41  Score=288.56  Aligned_cols=253  Identities=25%  Similarity=0.359  Sum_probs=207.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+..         ...++.++++|++|.++++++++++.+.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999999986531         13457889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-CCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-~~~~Y~  169 (285)
                      +++|++|||||....  ...++.+.+.++|++.+++|+.+++.+.++++|.|++++.++||++||..+..+.+ +...|+
T Consensus        76 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~  153 (260)
T PRK06523         76 GGVDILVHVLGGSSA--PAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYA  153 (260)
T ss_pred             CCCCEEEECCccccc--CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhH
Confidence            999999999997532  12457778999999999999999999999999999887789999999998887755 788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+++++|+++++.|++++||++|+|+||+|+|++...........  .....++..+.+.....  ..|.++..+|+|
T Consensus       154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~  229 (260)
T PRK06523        154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEA--AGTDYEGAKQIIMDSLG--GIPLGRPAEPEE  229 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhh--cCCCHHHHHHHHHHHhc--cCccCCCCCHHH
Confidence            99999999999999999999999999999999999875433211000  00000111111111111  246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++||+++.+++++|+.+.+|||...
T Consensus       230 va~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        230 VAELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHHHHHhCcccccccCceEEecCCccC
Confidence            99999999999999999999999999764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=284.35  Aligned_cols=248  Identities=30%  Similarity=0.400  Sum_probs=205.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+++|++|||||++|||++++++|+++|++|+++.++ .+..+.....+   ..++.++++|+++.+++.++++++.+.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999887654 44444443333   357889999999999999999999988


Q ss_pred             cCC-ccEEEECCCCCCCC--CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           90 HGR-LDILFNNAGVLGNQ--SKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        90 ~~~-id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      ++. +|++|||||.....  ....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++|++++|..+..+.++..
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH  157 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence            887 99999999864211  112457788999999999999999999999999999877789999999987766666778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|++++++++++|++++||+||+|+||+++|+.......               ++.......  ..|.+++.+
T Consensus       158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~  220 (253)
T PRK08642        158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP---------------DEVFDLIAA--TTPLRKVTT  220 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC---------------HHHHHHHHh--cCCcCCCCC
Confidence            999999999999999999999999999999999999986432110               111222222  246678899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+++++.||+++.+.+++|+.|.+|||+..
T Consensus       221 ~~~va~~~~~l~~~~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        221 PQEFADAVLFFASPWARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCCCeec
Confidence            99999999999999999999999999999753

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=285.46  Aligned_cols=257  Identities=25%  Similarity=0.291  Sum_probs=216.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|+++.++++.+++++.+.+
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988888777776556678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||.....   .++.+.+.++|++.+++|+.+++.+++++.+.|.+. .++||++||..+..+.++...|++
T Consensus        81 g~~d~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~  156 (258)
T PRK07890         81 GRVDALVNNAFRVPSM---KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKM  156 (258)
T ss_pred             CCccEEEECCccCCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHH
Confidence            9999999999975432   467778899999999999999999999999998654 479999999998888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.++++++.|+++++|++++++||++.|++..........  .   ......+.......  ..+.++..+|+|+
T Consensus       157 sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~--~~~~~~~~~~~dv  229 (258)
T PRK07890        157 AKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAG--K---YGVTVEQIYAETAA--NSDLKRLPTDDEV  229 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhccc--c---cCCCHHHHHHHHhh--cCCccccCCHHHH
Confidence            999999999999999999999999999999999986543221000  0   00011122222222  2356678899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++++|++++.+.+++|+++.+|||+..
T Consensus       230 a~a~~~l~~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        230 ASAVLFLASDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HHHHHHHcCHhhhCccCcEEEeCCcccc
Confidence            9999999998888999999999999753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.2e-41  Score=293.65  Aligned_cols=249  Identities=27%  Similarity=0.425  Sum_probs=210.6

Q ss_pred             ccccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531            5 TEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      .+..+..++++|+++||||++|||++++++|+++|++|++++++. +..++..+++.+.+.++.++++|+++.+++.+++
T Consensus         2 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~   81 (306)
T PRK07792          2 PRTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELV   81 (306)
T ss_pred             CcccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            355677889999999999999999999999999999999998754 4566667777666778999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-------CCceEEEEccc
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-------RSGCIISTASV  156 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~g~ii~vss~  156 (285)
                      +.+.+ ++++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++++.+.|+++       ..|+||++||.
T Consensus        82 ~~~~~-~g~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~  156 (306)
T PRK07792         82 ATAVG-LGGLDIVVNNAGITRD----RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSE  156 (306)
T ss_pred             HHHHH-hCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCc
Confidence            99988 9999999999998654    457788999999999999999999999999988643       13799999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          157 ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       157 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .+..+.++...|+++|+|+++|++.++.|+.++||+||+|+|| +.|++....+...             .+...     
T Consensus       157 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~-------------~~~~~-----  217 (306)
T PRK07792        157 AGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDA-------------PDVEA-----  217 (306)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhcccc-------------chhhh-----
Confidence            9888888889999999999999999999999999999999999 4888764432110             00000     


Q ss_pred             hhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       237 ~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                         ......+|+++++.+.||+++.+.+++|+.+.+|||+....
T Consensus       218 ---~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~  258 (306)
T PRK07792        218 ---GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLV  258 (306)
T ss_pred             ---hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEE
Confidence               01123489999999999999999999999999999987643

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=284.88  Aligned_cols=252  Identities=28%  Similarity=0.394  Sum_probs=211.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++|++|++|||||++|||++++++|+++|++|++++|+++.. +..+.+.+.+.++.++++|+++.+++..+++++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3579999999999999999999999999999999999988776 666666655678999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....    ..+.+.+ ++|++.+++|+.+++.+.+.++|.+.++ .++|+++||..+..+.++...|+
T Consensus        81 ~~~id~vi~~ag~~~~----~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~  154 (258)
T PRK08628         81 FGRIDGLVNNAGVNDG----VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYA  154 (258)
T ss_pred             cCCCCEEEECCcccCC----CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhH
Confidence            9999999999997532    2344444 9999999999999999999999988654 58999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc-CCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK-GVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e  248 (285)
                      ++|++++++++.++.|+.++||++++|+||.++|++.......        .+  ...+.........  +. .++.+|+
T Consensus       155 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~--------~~--~~~~~~~~~~~~~--~~~~~~~~~~  222 (258)
T PRK08628        155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIAT--------FD--DPEAKLAAITAKI--PLGHRMTTAE  222 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhh--------cc--CHHHHHHHHHhcC--CccccCCCHH
Confidence            9999999999999999999999999999999999986543211        00  0111122222221  33 3678999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|+.++|++++.+.+++|+.+.+|||++...
T Consensus       223 dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        223 EIADTAVFLLSERSSHTTGQWLFVDGGYVHLD  254 (258)
T ss_pred             HHHHHHHHHhChhhccccCceEEecCCccccc
Confidence            99999999999999999999999999987654

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=284.59  Aligned_cols=245  Identities=33%  Similarity=0.446  Sum_probs=213.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.++++.+.+.....++.++.+|+++.+++.++++++.+.++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            58899999999999999999999999999999999999988888777765566789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--------CceEEEEcccccccCCC
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--------SGCIISTASVASLMGGL  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~ii~vss~~~~~~~~  163 (285)
                      ++|++|||+|....    .++.+.+.++|+.++++|+.+++.+.+++++.|.++.        .+++|+++|..+..+.+
T Consensus        86 ~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949         86 TIDILVNNSGVSTT----QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            99999999997543    4566778899999999999999999999999887553        47999999998888888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ....|+++|++++.+++.++.|+.+++|+|++|+||+|+|++....+..               +.......  ..+.++
T Consensus       162 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~~  224 (258)
T PRK06949        162 QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET---------------EQGQKLVS--MLPRKR  224 (258)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh---------------HHHHHHHh--cCCCCC
Confidence            8899999999999999999999999999999999999999987643221               11111111  235678


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ..+|+|+++.+.||+++.+++++|+.|.+|||+.
T Consensus       225 ~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        225 VGKPEDLDGLLLLLAADESQFINGAIISADDGFG  258 (258)
T ss_pred             CcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCCC
Confidence            8999999999999999999999999999999974

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.9e-40  Score=282.10  Aligned_cols=244  Identities=25%  Similarity=0.333  Sum_probs=210.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      |++|+++||||++|||++++++|+++|++|++. +++.....+..+++.+.+.++.++.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999998885 4455555555666655566788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.+.+++++.|++++.++||++||..+..+.++...|+++
T Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~s  156 (246)
T PRK12938         81 EIDVLVNNAGITRD----VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA  156 (246)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHH
Confidence            99999999998543    46778899999999999999999999999999987777999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|++.++++++.|+.++||++++|+||+++|++.+...+                +.......  ..+.+++.+|++++
T Consensus       157 K~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~v~  218 (246)
T PRK12938        157 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP----------------DVLEKIVA--TIPVRRLGSPDEIG  218 (246)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh----------------HHHHHHHh--cCCccCCcCHHHHH
Confidence            9999999999999999999999999999999998653211                11222211  23566788999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+.||+++.+.+++|+++.+|||..+
T Consensus       219 ~~~~~l~~~~~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        219 SIVAWLASEESGFSTGADFSLNGGLHM  245 (246)
T ss_pred             HHHHHHcCcccCCccCcEEEECCcccC
Confidence            999999999999999999999999754

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=287.38  Aligned_cols=241  Identities=24%  Similarity=0.272  Sum_probs=207.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-------hHHHHHHhhcCCCceEEEeccCCCHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-------GIALADSLLSSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ||++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..+++...+.++.++++|+++.+++.++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            567899999999999999999999999999999999997653       3444555555567789999999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG  162 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~  162 (285)
                      ++++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++|++++|..+..+.
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  156 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINL----TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK  156 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCC----CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc
Confidence            99999999999999999997543    46777899999999999999999999999999988778999999998877766


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCC-CccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          163 --LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPF-GVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       163 --~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                        ++...|++||+|+++++++++.|+.++||+||+|+|| .++|++.+.....                         ..
T Consensus       157 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-------------------------~~  211 (273)
T PRK08278        157 WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-------------------------DE  211 (273)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-------------------------cc
Confidence              7788999999999999999999999999999999999 6899876542111                         01


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +..+..+|+++|+.+++++++.+.+++|+.+ .|++.....
T Consensus       212 ~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~-~~~~~~~~~  251 (273)
T PRK08278        212 AMRRSRTPEIMADAAYEILSRPAREFTGNFL-IDEEVLREA  251 (273)
T ss_pred             cccccCCHHHHHHHHHHHhcCccccceeEEE-eccchhhcc
Confidence            2345679999999999999999999999988 688877643

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-40  Score=283.01  Aligned_cols=250  Identities=30%  Similarity=0.379  Sum_probs=210.7

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.++|++|++|||||+++||++++++|+++|++|++++|+.         +...+.++.++++|+++.++++++++++.+
T Consensus         2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999876         112245688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||+|....    .++.+.+.+++++.+++|+.+++.+++++++.|++++.++||++||..+..+.++...|
T Consensus        73 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  148 (252)
T PRK08220         73 ETGPLDVLVNAAGILRM----GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAY  148 (252)
T ss_pred             HcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchh
Confidence            99999999999998643    56777899999999999999999999999999988778999999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++++++|++++||+|+++.||+++|++....+....      ...............  ..+.+++.+|+
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~  220 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDED------GEQQVIAGFPEQFKL--GIPLGKIARPQ  220 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchh------hhhhhhhhHHHHHhh--cCCCcccCCHH
Confidence            9999999999999999999999999999999999998654332100      000000011111111  24667889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|++++||+++.+.+++|+++.+|||.++.
T Consensus       221 dva~~~~~l~~~~~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        221 EIANAVLFLASDLASHITLQDIVVDGGATLG  251 (252)
T ss_pred             HHHHHHHHHhcchhcCccCcEEEECCCeecC
Confidence            9999999999999999999999999998764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.8e-40  Score=279.43  Aligned_cols=232  Identities=20%  Similarity=0.209  Sum_probs=194.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+...+.   +.+.  .+.++.+|+++.++++.+++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDG---LRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            57999999999999999999999999999999987654332   2222  267889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccCCCCCccchhhH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      ++|||||....    ....+.+.++|++++++|+.+++.+.+.++|.|.++.  .++||++||..+..+.++...|+++|
T Consensus        77 ~lv~~ag~~~~----~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asK  152 (236)
T PRK06483         77 AIIHNASDWLA----EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASK  152 (236)
T ss_pred             EEEECCccccC----CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHH
Confidence            99999997543    3345678999999999999999999999999997765  68999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+++|+++++.|+++ +||||+|+||++.|+...    .           .   +..+....  ..+.++..+|+|+++
T Consensus       153 aal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~-----------~---~~~~~~~~--~~~~~~~~~~~~va~  211 (236)
T PRK06483        153 AALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----D-----------A---AYRQKALA--KSLLKIEPGEEEIID  211 (236)
T ss_pred             HHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC----C-----------H---HHHHHHhc--cCccccCCCHHHHHH
Confidence            9999999999999998 499999999999774311    0           0   11111111  246677889999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+.||++  +.++||++|.+|||++.
T Consensus       212 ~~~~l~~--~~~~~G~~i~vdgg~~~  235 (236)
T PRK06483        212 LVDYLLT--SCYVTGRSLPVDGGRHL  235 (236)
T ss_pred             HHHHHhc--CCCcCCcEEEeCccccc
Confidence            9999997  67999999999999875

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-40  Score=279.44  Aligned_cols=246  Identities=31%  Similarity=0.425  Sum_probs=208.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +.+++|+++||||+++||++++++|+++|++|++++|+.+.+.+..+++   +.++.++++|+++.+++..+++.+.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          2 SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999887766665554   4578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|..  .+++|+++|..+..+.+....|++
T Consensus        79 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~  152 (249)
T PRK06500         79 GRLDAVFINAGVAKF----APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAA  152 (249)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHH
Confidence            999999999997543    45677899999999999999999999999999843  478999999888888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++++++++++.|+.++||++++++||+++|++.......          .............  ..+.++..+|+|+
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~~~~v  220 (249)
T PRK06500        153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLP----------EATLDAVAAQIQA--LVPLGRFGTPEEI  220 (249)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccC----------ccchHHHHHHHHh--cCCCCCCcCHHHH
Confidence            999999999999999999999999999999999986542110          0011111122222  2356677899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++++||+++.+.|++|+.|.+|||.+
T Consensus       221 a~~~~~l~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        221 AKAVLYLASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             HHHHHHHcCccccCccCCeEEECCCcc
Confidence            999999999988999999999999965

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-40  Score=284.50  Aligned_cols=248  Identities=30%  Similarity=0.414  Sum_probs=211.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999864 34455555544456788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||.....   .++.+.+.++|.+.+++|+.+++.+++++++.|.+  .++||++||..+..+.++...|
T Consensus       121 ~~~~iD~lI~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y  195 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQ---QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDY  195 (290)
T ss_pred             HcCCCCEEEECCcccCCC---CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchh
Confidence            999999999999975332   45778899999999999999999999999999843  4799999999988888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|++.++++++.++.++||+|++|+||+++|++......               .+.......  ..+.++..+|+
T Consensus       196 ~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~  258 (290)
T PRK06701        196 SATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD---------------EEKVSQFGS--NTPMQRPGQPE  258 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC---------------HHHHHHHHh--cCCcCCCcCHH
Confidence            9999999999999999999999999999999999997643211               111222222  23567788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|++++||+++.+.+++|+.+.+|||...+
T Consensus       259 dva~~~~~ll~~~~~~~~G~~i~idgg~~~~  289 (290)
T PRK06701        259 ELAPAYVFLASPDSSYITGQMLHVNGGVIVN  289 (290)
T ss_pred             HHHHHHHHHcCcccCCccCcEEEeCCCcccC
Confidence            9999999999999999999999999998765

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=7.9e-40  Score=279.87  Aligned_cols=244  Identities=27%  Similarity=0.428  Sum_probs=207.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..++||+++||||+++||++++++|+++|++|++++|++++..+..+.+   +.++.++++|+++.+++.++++++.+++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999999999877766655443   4568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||....  ...++.+.+.++|++.+++|+.+++.+++++.|.|.++ .++||++||..+..+.++...|++
T Consensus        83 g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~  159 (255)
T PRK05717         83 GRLDALVCNAAIADP--HNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAA  159 (255)
T ss_pred             CCCCEEEECCCcccC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHH
Confidence            999999999998643  12466778999999999999999999999999998654 589999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|++.++++++.|+++ +|+|++|+||+++|++......            .    ....... ...+.++..+|+|+
T Consensus       160 sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~------------~----~~~~~~~-~~~~~~~~~~~~~v  221 (255)
T PRK05717        160 SKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRA------------E----PLSEADH-AQHPAGRVGTVEDV  221 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccc------------h----HHHHHHh-hcCCCCCCcCHHHH
Confidence            999999999999999987 4999999999999987432110            0    1111111 13466788999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++.||+++.+.+++|+.+.+|||++.
T Consensus       222 a~~~~~l~~~~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        222 AAMVAWLLSRQAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             HHHHHHHcCchhcCccCcEEEECCCceE
Confidence            9999999999889999999999999764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.7e-40  Score=279.24  Aligned_cols=246  Identities=28%  Similarity=0.362  Sum_probs=212.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEE-EecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      |++++++||||++|||++++++|+++|++|++ ..|+.+..++..+.+.+.+.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999876 57888777777777766667889999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||....    .++.+.+.++|+..+++|+.+++.+++++++.|++++.++||++||..+..+.++...|+++
T Consensus        82 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  157 (250)
T PRK08063         82 RLDVFVNNAASGVL----RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVS  157 (250)
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHH
Confidence            99999999997533    56778899999999999999999999999999988888999999998888888888999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |++++++++++++|+.++||++++|+||++.|++.......              .+.......  ..+.++.++++|+|
T Consensus       158 K~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~~~dva  221 (250)
T PRK08063        158 KAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR--------------EELLEDARA--KTPAGRMVEPEDVA  221 (250)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc--------------hHHHHHHhc--CCCCCCCcCHHHHH
Confidence            99999999999999999999999999999999986532110              111111111  23456788999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+.+++++...+++|+.+.+|||.+.
T Consensus       222 ~~~~~~~~~~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        222 NAVLFLCSPEADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             HHHHHHcCchhcCccCCEEEECCCeee
Confidence            999999998888999999999999764

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=277.77  Aligned_cols=249  Identities=32%  Similarity=0.423  Sum_probs=216.9

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +|.++++|+++||||+++||++++++|+++|++|++++|+.+..+...+.+.+.+.++.++++|+++.++++++++++.+
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35568899999999999999999999999999999999998888877777765566899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||+|....    .++.+.+.+++++.+++|+.+++.+.+.+.+.|.+++.|++|++||..+..+.+....|
T Consensus        81 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  156 (250)
T PRK12939         81 ALGGLDGLVNNAGITNS----KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAY  156 (250)
T ss_pred             HcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchH
Confidence            99999999999998644    45677899999999999999999999999999987778999999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.++.++.+++|++++|+||+++|++.+.....                ........ ..+..++.+|+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~  219 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD----------------ERHAYYLK-GRALERLQVPD  219 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh----------------HHHHHHHh-cCCCCCCCCHH
Confidence            99999999999999999999999999999999999986532110                11111111 23567788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++++++++++...+++|+.|.+|||+.+
T Consensus       220 dva~~~~~l~~~~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        220 DVAGAVLFLLSDAARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            999999999998888999999999999864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-40  Score=280.16  Aligned_cols=253  Identities=24%  Similarity=0.351  Sum_probs=211.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|++|||||+++||++++++|+++|++|++++|+...++...+.+....  .++.++.+|+++.+++..+++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888877777665432  46899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhh
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      +|++|||||....    .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+....|+++
T Consensus        82 id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  157 (259)
T PRK12384         82 VDLLVYNAGIAKA----AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAA  157 (259)
T ss_pred             CCEEEECCCcCCC----CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHH
Confidence            9999999997644    5677889999999999999999999999999998766 6899999998888887888899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCc-cchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGV-ATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      |+|+++++++++.|++++||+|++++||.+ .|++.....+.....    .. ...++.......  ..+.++..+|+|+
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~--~~~~~~~~~~~dv  230 (259)
T PRK12384        158 KFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKK----LG-IKPDEVEQYYID--KVPLKRGCDYQDV  230 (259)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHh----cC-CChHHHHHHHHH--hCcccCCCCHHHH
Confidence            999999999999999999999999999975 666654332211000    00 011122222222  3567888999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++++||+++.+.+++|+++++|||...
T Consensus       231 ~~~~~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        231 LNMLLFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HHHHHHHcCcccccccCceEEEcCCEEe
Confidence            9999999999889999999999999864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.6e-39  Score=276.87  Aligned_cols=249  Identities=31%  Similarity=0.442  Sum_probs=215.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..+++.+.+.+.+.++.++++|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999998888777777665677999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|++|||+|....    .++.+.+.++|++.+++|+.+++.+.+++.+.|++++.+++|++||..+..+.++...|+++|
T Consensus        81 ~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK  156 (250)
T TIGR03206        81 VDVLVNNAGWDKF----GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACK  156 (250)
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHH
Confidence            9999999998533    466778899999999999999999999999999877788999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|++.++++++.|+.+.+|+++.++||.++|++........        .  ...+.......  ..+.++..+|+|+|+
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~--------~--~~~~~~~~~~~--~~~~~~~~~~~dva~  224 (250)
T TIGR03206       157 GGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA--------E--NPEKLREAFTR--AIPLGRLGQPDDLPG  224 (250)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc--------C--ChHHHHHHHHh--cCCccCCcCHHHHHH
Confidence            99999999999999888999999999999999876543210        0  01111222222  235677889999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ++.+|+++...+++|+++.+|||+.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       225 AILFFSSDDASFITGQVLSVSGGLT  249 (250)
T ss_pred             HHHHHcCcccCCCcCcEEEeCCCcc
Confidence            9999999999999999999999975

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=277.05  Aligned_cols=251  Identities=37%  Similarity=0.562  Sum_probs=216.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+. .+.++.++++|++|.++++++++++.+++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999888777776664 35668999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||+|....    .++.+.+.+++++.+++|+.+++.+.+.+++.|++++.++|+++||..+..+.++...|++
T Consensus        80 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  155 (252)
T PRK06138         80 GRLDVLVNNAGFGCG----GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVA  155 (252)
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHH
Confidence            999999999997643    4567788999999999999999999999999998777899999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.++++++.|+++.||++++++||.++|++.......           ....+........ ..+..++.+|+|+
T Consensus       156 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~d~  223 (252)
T PRK06138        156 SKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFAR-----------HADPEALREALRA-RHPMNRFGTAEEV  223 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhcc-----------ccChHHHHHHHHh-cCCCCCCcCHHHH
Confidence            999999999999999998999999999999999987654321           0011122222211 2345567899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++.+++++++...+++|+.+.+|||++.
T Consensus       224 a~~~~~l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        224 AQAALFLASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             HHHHHHHcCchhcCccCCEEEECCCeec
Confidence            9999999999999999999999999876

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-40  Score=275.95  Aligned_cols=223  Identities=17%  Similarity=0.199  Sum_probs=193.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.++..+++|+++.++++++++++.+++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999999988888887666778889999999999999999999999


Q ss_pred             C-CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           91 G-RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        91 ~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      + ++|++|||||....   ..++.+.+.++|.+.+++|+.+++.+++.++|.|++++ .|+||++||..+   .++...|
T Consensus        81 g~~iD~li~nag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y  154 (227)
T PRK08862         81 NRAPDVLVNNWTSSPL---PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGV  154 (227)
T ss_pred             CCCCCEEEECCccCCC---CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchh
Confidence            8 99999999986432   25778889999999999999999999999999997654 689999999754   3567889


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+++++.|++++||+||+|+||+++|+....                  .+.+.+.             .|
T Consensus       155 ~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~------------------~~~~~~~-------------~~  203 (227)
T PRK08862        155 ESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD------------------AVHWAEI-------------QD  203 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC------------------HHHHHHH-------------HH
Confidence            9999999999999999999999999999999999973110                  0111110             17


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEe
Q 040531          249 DIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      |++.+..||++  +.|+||+.+..
T Consensus       204 ~~~~~~~~l~~--~~~~tg~~~~~  225 (227)
T PRK08862        204 ELIRNTEYIVA--NEYFSGRVVEA  225 (227)
T ss_pred             HHHhheeEEEe--cccccceEEee
Confidence            99999999997  67999999874

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=277.88  Aligned_cols=247  Identities=28%  Similarity=0.386  Sum_probs=213.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+...+.++.++++|+++.+++.++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999888887777776556678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||....    .++.+.+.+++++.+++|+.+++.+.+++.+.|.+ ++.+++|++||..+..+.++...|+
T Consensus        86 ~~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  161 (263)
T PRK07814         86 GRLDIVVNNVGGTMP----NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYG  161 (263)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhH
Confidence            999999999997543    56778899999999999999999999999999976 4678999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.++++++.|+.+ +|++++|+||++.|++.......               ..+...... ..+..+..+|+|
T Consensus       162 ~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~~  224 (263)
T PRK07814        162 TAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAAN---------------DELRAPMEK-ATPLRRLGDPED  224 (263)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCC---------------HHHHHHHHh-cCCCCCCcCHHH
Confidence            9999999999999999987 69999999999999876432100               111111111 235566789999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+.++|++++.+.+++|+.+.+|||...
T Consensus       225 va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        225 IAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             HHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            99999999999899999999999999876

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2.8e-39  Score=276.08  Aligned_cols=252  Identities=32%  Similarity=0.466  Sum_probs=213.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++..+.+...+.++.++.+|++|++++.++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888777777666677899999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhhHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ||||+|....    .++.+.+.++|++.+++|+.+++.+++.+++.|++++ .+++|++||..+..+.+....|+++|++
T Consensus        81 vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  156 (254)
T TIGR02415        81 MVNNAGVAPI----TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFA  156 (254)
T ss_pred             EEECCCcCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHH
Confidence            9999998543    5677889999999999999999999999999987764 4899999999998898999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.+++.++.|+.+.+|+|++++||+++|++...........  ...   ...........  ..+.++..+|+|+++++
T Consensus       157 ~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~--~~~---~~~~~~~~~~~--~~~~~~~~~~~~~a~~~  229 (254)
T TIGR02415       157 VRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEI--AGK---PIGEGFEEFSS--EIALGRPSEPEDVAGLV  229 (254)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhc--ccC---chHHHHHHHHh--hCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999999999865432211100  000   11111111111  24567789999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +||+++.+.+++|+++.+|||+..
T Consensus       230 ~~l~~~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       230 SFLASEDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             HhhcccccCCccCcEEEecCCccC
Confidence            999999999999999999999753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-39  Score=275.12  Aligned_cols=234  Identities=29%  Similarity=0.409  Sum_probs=193.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..|++|++|||||++|||++++++|+++|++|+++.++ .+..+++.+++     .+.++.+|++|.+++.++++    .
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~----~   72 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVR----K   72 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHH----H
Confidence            46889999999999999999999999999999888764 44444443332     25678899999998877664    3


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~~Y  168 (285)
                      ++++|++|||||....    .+..+.+.++|++.+++|+.+++.+++.+++.|.  ..+++|++||..+. .+.++...|
T Consensus        73 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y  146 (237)
T PRK12742         73 SGALDILVVNAGIAVF----GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAY  146 (237)
T ss_pred             hCCCcEEEECCCCCCC----CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccCCCCCCcch
Confidence            5789999999997643    4556788999999999999999999999999985  35899999998774 567788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.++.|+.++||+||+|+||+++|++....              .+..+    .... ..+.++..+|+
T Consensus       147 ~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~--------------~~~~~----~~~~-~~~~~~~~~p~  207 (237)
T PRK12742        147 AASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN--------------GPMKD----MMHS-FMAIKRHGRPE  207 (237)
T ss_pred             HHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc--------------cHHHH----HHHh-cCCCCCCCCHH
Confidence            99999999999999999999999999999999999985321              01111    1111 23567889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++++.||+++.+.+++|+.+.+|||++.
T Consensus       208 ~~a~~~~~l~s~~~~~~~G~~~~~dgg~~~  237 (237)
T PRK12742        208 EVAGMVAWLAGPEASFVTGAMHTIDGAFGA  237 (237)
T ss_pred             HHHHHHHHHcCcccCcccCCEEEeCCCcCC
Confidence            999999999999999999999999999863

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=277.55  Aligned_cols=259  Identities=29%  Similarity=0.394  Sum_probs=217.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.++++|++|||||+++||++++++|+++|++|++++|+++...+..+.+.+.+.++.++++|+++.++++++++.+.+.
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888888887666677889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhh-cCCCCceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVM-VPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|+||||||....    .++.+.+.++++..+++|+.+++.+++++++.| ++.+.++||++||..+..+.+....|
T Consensus        82 ~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y  157 (262)
T PRK13394         82 FGSVDILVSNAGIQIV----NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAY  157 (262)
T ss_pred             cCCCCEEEECCccCCC----CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCccc
Confidence            9999999999998643    456677889999999999999999999999999 66667899999999888888888899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++++++.++.++++.+|++++++||+++|++.....+.....    .. ....+.....+.. ..+.+++++|+
T Consensus       158 ~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~  231 (262)
T PRK13394        158 VTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKE----LG-ISEEEVVKKVMLG-KTVDGVFTTVE  231 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhc----cC-CChHHHHHHHHhc-CCCCCCCCCHH
Confidence            999999999999999999989999999999999999865443221000    00 0111222222221 23456789999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++++++++....+++|+.|.+|||+.+
T Consensus       232 dva~a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        232 DVAQTVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHHHHHcCccccCCcCCEEeeCCceec
Confidence            999999999998888899999999999753

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-40  Score=285.99  Aligned_cols=241  Identities=23%  Similarity=0.325  Sum_probs=208.0

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .++.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.. ..++..+++|++|.++++++++++.
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999988887777642 4567778899999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|++|||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.++...
T Consensus        81 ~~~g~id~vI~nAG~~~~----~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  155 (296)
T PRK05872         81 ERFGGIDVVVANAGIASG----GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAA  155 (296)
T ss_pred             HHcCCCCEEEECCCcCCC----cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchH
Confidence            999999999999998643    677889999999999999999999999999998754 589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+++++|+++++.|++++||+|++++||+++|++.+.....              .+...........+.++..+|
T Consensus       156 Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~--------------~~~~~~~~~~~~~p~~~~~~~  221 (296)
T PRK05872        156 YCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD--------------LPAFRELRARLPWPLRRTTSV  221 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc--------------chhHHHHHhhCCCcccCCCCH
Confidence            999999999999999999999999999999999999987643211              112222233333466788899


Q ss_pred             HHHHHHHHHHhcCCCCccccc
Q 040531          248 RDIAEAALYLASDESKYISGH  268 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~  268 (285)
                      +|+++.+++++++...+++|.
T Consensus       222 ~~va~~i~~~~~~~~~~i~~~  242 (296)
T PRK05872        222 EKCAAAFVDGIERRARRVYAP  242 (296)
T ss_pred             HHHHHHHHHHHhcCCCEEEch
Confidence            999999999999988888765

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=278.35  Aligned_cols=242  Identities=29%  Similarity=0.349  Sum_probs=205.5

Q ss_pred             ccCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecC-----------chhhHHHHHHhhcCCCceEEEeccCCCHH
Q 040531           11 KTLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADID-----------DAAGIALADSLLSSSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        11 ~~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~D~s~~~   77 (285)
                      +++++|++|||||++  |||++++++|+++|++|++++|+           ........+.+...+.++.++++|+++.+
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            467899999999994  99999999999999999999987           22222233444444567999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ++..+++++.++++++|+||||||....    .++.+.+.+++++.+++|+.+++.+.+++++.|.++..++||++||..
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~  156 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTH----TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQ  156 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCcc
Confidence            9999999999999999999999997543    567788999999999999999999999999999777778999999998


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          158 SLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       158 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      +..+.++...|+++|+|+++++++++.|+.+.||+|++++||+++|++.....                   ......  
T Consensus       157 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~-------------------~~~~~~--  215 (256)
T PRK12748        157 SLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEEL-------------------KHHLVP--  215 (256)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhH-------------------HHhhhc--
Confidence            88888888999999999999999999999999999999999999998643211                   001111  


Q ss_pred             hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       238 ~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ..+..+..+|+|+++.+.||+++.+.+++|+++.+|||++
T Consensus       216 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        216 KFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCcc
Confidence            1244567799999999999999999999999999999986

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-39  Score=276.62  Aligned_cols=246  Identities=37%  Similarity=0.472  Sum_probs=211.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+.++...+.+.+.+.++.++++|++|.++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999888777777776556678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh-hcCCCCceEEEEcccccccCCCC----C
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV-MVPRRSGCIISTASVASLMGGLG----P  165 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~g~ii~vss~~~~~~~~~----~  165 (285)
                      +++|++|||||....    .+..+.+.+.|++.+++|+.+++.+++++.+. |.+++.+++|++||..+..+.++    .
T Consensus        88 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~  163 (259)
T PRK08213         88 GHVDILVNNAGATWG----APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDT  163 (259)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCc
Confidence            999999999997533    45667889999999999999999999999998 76666789999999877665543    4


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|++++.+++++++++.++||+++.++||+++|++.....+                +.......  ..+..+..
T Consensus       164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~  225 (259)
T PRK08213        164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE----------------RLGEDLLA--HTPLGRLG  225 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH----------------HHHHHHHh--cCCCCCCc
Confidence            8899999999999999999999999999999999999987653321                11112222  23556778


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+++.+.||+++.+.+++|+.+.+|||.++
T Consensus       226 ~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        226 DDEDLKGAALLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            999999999999999999999999999999864

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=278.63  Aligned_cols=248  Identities=22%  Similarity=0.323  Sum_probs=196.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc----hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD----AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~----~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ++++++|+++||||++|||+++|++|+++|++|++++++.    +..+...+++...+.++.++++|+++.+++++++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            4568899999999999999999999999999977766443    334444445544456788999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++  .+++++++|.....+.+..
T Consensus        83 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~  156 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLK----KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFY  156 (257)
T ss_pred             HHHhhCCCCEEEECCcccCC----CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCc
Confidence            99999999999999998543    56778899999999999999999999999999854  3677776433322345678


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc--CC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GV  243 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  243 (285)
                      ..|+++|+|++.|+++++.|+.++||+|++++||++.|++.......            ...+.......  ..+.  .+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~  222 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA------------EAVAYHKTAAA--LSPFSKTG  222 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc------------chhhccccccc--ccccccCC
Confidence            89999999999999999999999999999999999999975331110            00000000000  1122  26


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+|+|++++++||+++ ..+++|+++.+|||+..
T Consensus       223 ~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        223 LTDIEDIVPFIRFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             CCCHHHHHHHHHHhhcc-cceeecceEeecCCccC
Confidence            78999999999999996 67999999999999875

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2e-39  Score=274.64  Aligned_cols=236  Identities=26%  Similarity=0.413  Sum_probs=203.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++||||++|||++++++|+++|++|++++|+ .+..+...+++.+.+.++.++++|+++.+++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999998865 455566666666666789999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHH-HhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAA-KVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      |||+|....    .++.+.+.++|+..+++|+.+++.++++++ |.+.+++.++||++||..+..+.++...|+++|+|+
T Consensus        81 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  156 (239)
T TIGR01831        81 VLNAGITRD----AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGL  156 (239)
T ss_pred             EECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHH
Confidence            999998643    456678899999999999999999999875 555555678999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      ++++++++.|+.++||++++++||+++|++.....                 +.......  ..|.++..+|+|++++++
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~--~~~~~~~~~~~~va~~~~  217 (239)
T TIGR01831       157 IGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE-----------------HDLDEALK--TVPMNRMGQPAEVASLAG  217 (239)
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh-----------------HHHHHHHh--cCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999865321                 11111222  246788899999999999


Q ss_pred             HHhcCCCCcccccEEEecCCc
Q 040531          256 YLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       256 ~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ||+++.+.+++|+.+.+|||+
T Consensus       218 ~l~~~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       218 FLMSDGASYVTRQVISVNGGM  238 (239)
T ss_pred             HHcCchhcCccCCEEEecCCc
Confidence            999999999999999999996

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-39  Score=275.01  Aligned_cols=250  Identities=38%  Similarity=0.515  Sum_probs=215.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+++++++|||||+++||++++++|+++|++|++++|+.+..+...+.+.+ +.++.++++|+++.++++++++++.+.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            458899999999999999999999999999999999999887777776644 5568899999999999999999998999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||+|.....   .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.
T Consensus        80 ~~~d~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  156 (251)
T PRK07231         80 GSVDILVNNAGTTHRN---GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNA  156 (251)
T ss_pred             CCCCEEEECCCCCCCC---CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHH
Confidence            9999999999975432   4577789999999999999999999999999998777899999999999889899999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.+++.++.+++++||++++++||+++|++.......            ...+.......  ..+.++..+|+|+
T Consensus       157 sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~dv  222 (251)
T PRK07231        157 SKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGE------------PTPENRAKFLA--TIPLGRLGTPEDI  222 (251)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcc------------cChHHHHHHhc--CCCCCCCcCHHHH
Confidence            999999999999999999999999999999999987654321            00111111222  2356678899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++++|+++...+++|+.+.+|||..+
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        223 ANAALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             HHHHHHHhCccccCCCCCeEEECCCccC
Confidence            9999999999889999999999999754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-39  Score=272.99  Aligned_cols=195  Identities=30%  Similarity=0.456  Sum_probs=185.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ...+++|++||||||++||||++|.+||++|+.+++.|.|.+...+..+++++. ++++.+.||+|+.+++.++.+++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHH
Confidence            566899999999999999999999999999999999999999999999999776 4899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +.|.||+||||||+...    .++.+.+.+++++++++|+.|++...|+++|.|.+++.|+||.++|.++..+.++...|
T Consensus       111 e~G~V~ILVNNAGI~~~----~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Y  186 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTG----KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADY  186 (300)
T ss_pred             hcCCceEEEeccccccC----CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhh
Confidence            99999999999999865    67888999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhC---CCCcEEEEEeCCCccchhhhh
Q 040531          169 TVSKHAIVGLTKNTACELG---KYGIRVNCISPFGVATSMLVN  208 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~---~~~i~v~~v~pg~v~t~~~~~  208 (285)
                      ++||+|+.+|.++|..|+.   ..||+...++|+.++|+|...
T Consensus       187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            9999999999999999985   457999999999999999875

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-39  Score=272.46  Aligned_cols=243  Identities=33%  Similarity=0.459  Sum_probs=208.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |++++|+++||||+++||++++++|+++|++|+++.|+.+ ..++..+++.+.+.++.++++|+++.++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988877644 445555666555678999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....    .++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||.++..+.++...|+
T Consensus        81 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~  154 (245)
T PRK12937         81 FGRIDVLVNNAGVMPL----GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYA  154 (245)
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhH
Confidence            9999999999998643    56677889999999999999999999999999853  58999999998888888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.++++++.|+.+.||++++++||++.|++......               .+.......  ..+.++..+|+|
T Consensus       155 ~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~d  217 (245)
T PRK12937        155 ASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS---------------AEQIDQLAG--LAPLERLGTPEE  217 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC---------------HHHHHHHHh--cCCCCCCCCHHH
Confidence            999999999999999999999999999999999998532110               111222222  246677889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      +++.++||+++.+.+++|+.+.+|||+
T Consensus       218 ~a~~~~~l~~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        218 IAAAVAFLAGPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             HHHHHHHHcCccccCccccEEEeCCCC
Confidence            999999999999999999999999986

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=5.2e-39  Score=272.75  Aligned_cols=244  Identities=27%  Similarity=0.411  Sum_probs=210.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+++++|+++||||+++||++++++|+++|+.|++.+|+.+.+++..+.+   +.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888777665544   456888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....    .++.+.+.++|++.+++|+.+++.+++++.+.+.+++.++||++||..+..+.++...|+
T Consensus        78 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  153 (245)
T PRK12936         78 LEGVDILVNNAGITKD----GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYC  153 (245)
T ss_pred             cCCCCEEEECCCCCCC----CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchH
Confidence            9999999999998643    456677889999999999999999999999988766778999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+.++++.++.++.+.|+++++++||+++|++.....+             ...+   ....  ..+..+..+|++
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-------------~~~~---~~~~--~~~~~~~~~~~~  215 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND-------------KQKE---AIMG--AIPMKRMGTGAE  215 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh-------------HHHH---HHhc--CCCCCCCcCHHH
Confidence            999999999999999999999999999999999987643210             1111   1111  235677889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++.+.||+++...+++|+++.+|||.+.
T Consensus       216 ia~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        216 VASAVAYLASSEAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             HHHHHHHHcCccccCcCCCEEEECCCccc
Confidence            99999999998888999999999999764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-39  Score=273.77  Aligned_cols=234  Identities=32%  Similarity=0.461  Sum_probs=197.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|+++||||++|||++++++|+++|++|++++|+....         ...++.++++|+++.      ++++.+.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~   65 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV   65 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh
Confidence            468899999999999999999999999999999999875431         134688999999886      44455667


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|.+++++.++||++||..+..+.++...|++
T Consensus        66 ~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  142 (235)
T PRK06550         66 PSVDILCNTAGILDD---YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTA  142 (235)
T ss_pred             CCCCEEEECCCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHH
Confidence            899999999997532   14567789999999999999999999999999998877899999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++++++++++.|+.++||++++|+||+++|++....++.               +.+...... ..+.+++.+|+|+
T Consensus       143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~~~  206 (235)
T PRK06550        143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP---------------GGLADWVAR-ETPIKRWAEPEEV  206 (235)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc---------------hHHHHHHhc-cCCcCCCCCHHHH
Confidence            999999999999999999999999999999999975432211               111111111 2467788899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++||+++.+.+++|+++.+|||++.
T Consensus       207 a~~~~~l~s~~~~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        207 AELTLFLASGKADYMQGTIVPIDGGWTL  234 (235)
T ss_pred             HHHHHHHcChhhccCCCcEEEECCceec
Confidence            9999999999999999999999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3e-39  Score=302.98  Aligned_cols=248  Identities=35%  Similarity=0.485  Sum_probs=212.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|+++.++++++++++.+.++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999999999999988887776665   45678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCc-eEEEEcccccccCCCCCccchh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      ++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..+.++...|++
T Consensus        79 ~iD~li~nag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~a  156 (520)
T PRK06484         79 RIDVLVNNAGVTDP--TMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSA  156 (520)
T ss_pred             CCCEEEECCCcCCC--CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHH
Confidence            99999999997432  12467788999999999999999999999999999776555 9999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++|+++++.|+.+++|+|++|+||+|+|++.......           ..  ........  ..+.++..+|+++
T Consensus       157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~-----------~~--~~~~~~~~--~~~~~~~~~~~~v  221 (520)
T PRK06484        157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERA-----------GK--LDPSAVRS--RIPLGRLGRPEEI  221 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhccc-----------ch--hhhHHHHh--cCCCCCCcCHHHH
Confidence            999999999999999999999999999999999987543211           00  00111111  1345677899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++.+.||+++.+.+++|+.+.+|||+...
T Consensus       222 a~~v~~l~~~~~~~~~G~~~~~~gg~~~~  250 (520)
T PRK06484        222 AEAVFFLASDQASYITGSTLVVDGGWTVY  250 (520)
T ss_pred             HHHHHHHhCccccCccCceEEecCCeecc
Confidence            99999999999999999999999998653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=272.51  Aligned_cols=256  Identities=37%  Similarity=0.486  Sum_probs=218.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..++..+++.+.+.++.++.||+++.++++++++++.+.++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999888887777666778999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||....    .++.+.+.++++..+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|
T Consensus        82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k  157 (258)
T PRK12429         82 VDILVNNAGIQHV----APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAK  157 (258)
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHH
Confidence            9999999997643    566778899999999999999999999999999888889999999999988999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      ++++++++.++.|+.+.+|++++++||+++|++...........     ............+.. ..+.+++++++|+|+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~  231 (258)
T PRK12429        158 HGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKE-----RGISEEEVLEDVLLP-LVPQKRFTTVEEIAD  231 (258)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccc-----cCCChHHHHHHHHhc-cCCccccCCHHHHHH
Confidence            99999999999999999999999999999999876543321100     001111222222222 234567899999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++|+++....++|+++.+|||++.
T Consensus       232 ~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        232 YALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHHHcCccccCccCCeEEeCCCEec
Confidence            99999988888899999999999874

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-39  Score=285.24  Aligned_cols=228  Identities=23%  Similarity=0.297  Sum_probs=198.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++|.++++++++++.+
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            46779999999999999999999999999999999999999999988888877677888999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||||+...    .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||+++|..+..+.|....|
T Consensus        81 ~~g~iD~lVnnAG~~~~----~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y  156 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAV----GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAY  156 (330)
T ss_pred             hcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhH
Confidence            89999999999998643    57788999999999999999999999999999988888999999999999899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCC-CcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          169 TVSKHAIVGLTKNTACELGKY-GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ++||+|+.+|+++|+.|+.++ ||+|++|+||+++|++.......                     ......+.....+|
T Consensus       157 ~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~---------------------~~~~~~~~~~~~~p  215 (330)
T PRK06139        157 SASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY---------------------TGRRLTPPPPVYDP  215 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc---------------------ccccccCCCCCCCH
Confidence            999999999999999999875 89999999999999986432110                     00001122335689


Q ss_pred             HHHHHHHHHHhcCC
Q 040531          248 RDIAEAALYLASDE  261 (285)
Q Consensus       248 eeva~~~~~l~s~~  261 (285)
                      |++|+.+++++.+.
T Consensus       216 e~vA~~il~~~~~~  229 (330)
T PRK06139        216 RRVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999888543

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-39  Score=269.13  Aligned_cols=217  Identities=23%  Similarity=0.257  Sum_probs=181.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++     ++.++++|+++.++++++++++.+   ++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            4899999999999999999999999999999988877665544     356789999999999999887643   69999


Q ss_pred             EECCCCCCC--CCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           97 FNNAGVLGN--QSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        97 v~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      |||||....  .+...++.+ +.++|++++++|+.+++.++++++|.|++  .|+||+++|..    .+....|+++|+|
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaa  146 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAA  146 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHH
Confidence            999985321  111123444 57899999999999999999999999953  58999999975    3456789999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +++|+++++.|++++||+||+|+||+++|++.....                           ..|.   .+|+|+++.+
T Consensus       147 l~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~---------------------------~~p~---~~~~~ia~~~  196 (223)
T PRK05884        147 LSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS---------------------------RTPP---PVAAEIARLA  196 (223)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc---------------------------CCCC---CCHHHHHHHH
Confidence            999999999999999999999999999998642110                           0121   2899999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .||+++.+.+++|+++.+|||+..
T Consensus       197 ~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        197 LFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             HHHcCchhhccCCcEEEeCCCeec
Confidence            999999999999999999999875

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=272.45  Aligned_cols=245  Identities=32%  Similarity=0.518  Sum_probs=206.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..|++|+++||||++|||++++++|+++|++|++++|+...+++..+++.     ..++++|+++.++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999998877666655542     2578999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-CCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-LGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-~~~~~Y~  169 (285)
                      +++|++|||||.....  ..++.+.+.+.|++.+++|+.+++.+++.++|.|++++.++||++||..+..+. ++...|+
T Consensus        78 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~  155 (255)
T PRK06057         78 GSVDIAFNNAGISPPE--DDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYT  155 (255)
T ss_pred             CCCCEEEECCCcCCCC--CCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchH
Confidence            9999999999975321  245677889999999999999999999999999987778999999998776665 3677899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|++++++.++.++.++||++++|+||+++|++....+..           .  .+.......  ..+.+++.+|+|
T Consensus       156 ~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----------~--~~~~~~~~~--~~~~~~~~~~~~  220 (255)
T PRK06057        156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-----------D--PERAARRLV--HVPMGRFAEPEE  220 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-----------C--HHHHHHHHh--cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999987543221           0  011111111  235677899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++++.||+++.+.+++|+.+.+|||..
T Consensus       221 ~a~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        221 IAAAVAFLASDDASFITASTFLVDGGIS  248 (255)
T ss_pred             HHHHHHHHhCccccCccCcEEEECCCee
Confidence            9999999999999999999999999975

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.4e-38  Score=271.95  Aligned_cols=242  Identities=27%  Similarity=0.398  Sum_probs=202.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  ...+.++++|++|.+++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888887777432  2346778999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--------  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--------  162 (285)
                      +++|++||||+..... ...++.+.+.+.|+..+++|+.+++.++++++|.|++++.++||++||..+..+.        
T Consensus        82 ~~id~vi~~A~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 GKIDGAVNCAYPRNKD-YGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CCccEEEECCcccccc-ccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence            9999999999764321 1246778899999999999999999999999999988778899999997765321        


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          163 --LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       163 --~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                        .....|+++|+++++++++++.|+.++||++++++||.+.++....                     +...+.. ..+
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~---------------------~~~~~~~-~~~  218 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA---------------------FLNAYKK-CCN  218 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH---------------------HHHHHHh-cCC
Confidence              1123699999999999999999999999999999999987754211                     0111111 124


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .++..+|+|+|+.++|++++.+.+++|+.+.+|||++
T Consensus       219 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        219 GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             ccCCCCHHHhhhhHhheeccccccccCceEEecCCcc
Confidence            4667899999999999999999999999999999975

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-38  Score=270.35  Aligned_cols=244  Identities=34%  Similarity=0.469  Sum_probs=206.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+.+.+..  ..+..+++|+++.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666666666664432  2356789999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ++|||||....    .++.+.+.+++++++++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|++
T Consensus        82 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a  157 (251)
T PRK07069         82 VLVNNAGVGSF----GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAA  157 (251)
T ss_pred             EEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHH
Confidence            99999998643    56778899999999999999999999999999988778999999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCCCC--cEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          175 IVGLTKNTACELGKYG--IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      ++.++++++.|+.+++  |+|++|+||+++|++.......           ....+........  .+.+++.+|+|+++
T Consensus       158 ~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~va~  224 (251)
T PRK07069        158 VASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQR-----------LGEEEATRKLARG--VPLGRLGEPDDVAH  224 (251)
T ss_pred             HHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhh-----------ccchhHHHHHhcc--CCCCCCcCHHHHHH
Confidence            9999999999998765  9999999999999987643221           0011122222222  35567789999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+++|+++.+.+++|+.+.+|||.+.
T Consensus       225 ~~~~l~~~~~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        225 AVLYLASDESRFVTGAELVIDGGICA  250 (251)
T ss_pred             HHHHHcCccccCccCCEEEECCCeec
Confidence            99999999999999999999999764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.2e-38  Score=272.88  Aligned_cols=240  Identities=22%  Similarity=0.237  Sum_probs=197.1

Q ss_pred             EEEEecCCCchhHHHHHHHHH----CCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           17 IAIVTGGARGIGEATVRLFVK----HGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~----~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++||||++|||++++++|++    +|++|++++|+.+.++++.+++.+.  +.++.++++|+++.++++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999888888877652  3468899999999999999999998877


Q ss_pred             CCc----cEEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccCCC
Q 040531           91 GRL----DILFNNAGVLGNQSKHKSITD-FDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMGGL  163 (285)
Q Consensus        91 ~~i----d~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~~~  163 (285)
                      +.+    |+||||||......  ....+ .+.++|++.+++|+.+++.+++.++|.|++++  .++||++||..+..+.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~--~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVS--KGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccc--cccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC
Confidence            643    69999999753211  12222 35789999999999999999999999997653  47999999999988889


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|++||+|+++|+++++.|++++||+||+++||+|+|++.+...+...           ..+.......  ..+.++
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~  226 (256)
T TIGR01500       160 GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESV-----------DPDMRKGLQE--LKAKGK  226 (256)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcC-----------ChhHHHHHHH--HHhcCC
Confidence            999999999999999999999999999999999999999999765422100           0011111111  246788


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEe
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      ..+|+|+|+.+++|++ .++++||+++..
T Consensus       227 ~~~p~eva~~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       227 LVDPKVSAQKLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             CCCHHHHHHHHHHHHh-cCCcCCcceeec
Confidence            8999999999999996 468999998864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=269.85  Aligned_cols=234  Identities=20%  Similarity=0.228  Sum_probs=202.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCC--HHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSL--EQDIQNLINVT   86 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~--~~~i~~~~~~i   86 (285)
                      |.+|++|+++||||++|||++++++|+++|++|++++|+.+.++...+++.+. ..++.++++|+++  .+++.++++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888877777543 3467788999986  57889999999


Q ss_pred             HHHc-CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           87 ISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        87 ~~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      .+.+ +.+|++|||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|.+.+.+++++++|..+..+.++.
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~  157 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYAL---SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYW  157 (239)
T ss_pred             HHHhCCCCCEEEEeccccccC---CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCc
Confidence            8888 8899999999975332   56788899999999999999999999999999987778999999999888888888


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCC-CcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKY-GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ..|++||+|++.+++.++.|+.++ +|+|++|.||+|+|++.....+.                          ....+.
T Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~--------------------------~~~~~~  211 (239)
T PRK08703        158 GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPG--------------------------EAKSER  211 (239)
T ss_pred             cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCC--------------------------CCcccc
Confidence            999999999999999999999887 69999999999999986543221                          001123


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEe
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      .+++|+++.++|++++++.++||++|.|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        212 KSYGDVLPAFVWWASAESKGRSGEIVYL  239 (239)
T ss_pred             CCHHHHHHHHHHHhCccccCcCCeEeeC
Confidence            4899999999999999999999999865

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-38  Score=272.91  Aligned_cols=249  Identities=28%  Similarity=0.353  Sum_probs=213.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ++|++|++|||||+++||++++++|+++|++|++++|+.+..+...+++.+.  ..++.++++|+++.+++.++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988777776666443  35688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||||.....   .++.+.+.++|.+.+++|+.+++.+++++++.|.+++.++|+++||..+..+.++...|
T Consensus        83 ~~~~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  159 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETI---GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAY  159 (276)
T ss_pred             HcCCCCEEEECCCcccCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcch
Confidence            999999999999975322   46677889999999999999999999999999987778899999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.+++|+.+.+|++++|+||+++|++.......              .........  ..+.++.++|+
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~~~  223 (276)
T PRK05875        160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES--------------PELSADYRA--CTPLPRVGEVE  223 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC--------------HHHHHHHHc--CCCCCCCcCHH
Confidence            99999999999999999999999999999999999986432111              011111111  24567788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++++||+++...+++|+.+.+|||...
T Consensus       224 dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        224 DVANLAMFLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             HHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence            999999999999888999999999999876

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.6e-38  Score=254.76  Aligned_cols=252  Identities=23%  Similarity=0.234  Sum_probs=220.0

Q ss_pred             cccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +..|+||++||+|-.  +.|+..||+.|.++|+++.+++.++ ++++..+++.+.-+.-.+++||+++.++++.+++++.
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence            357899999999965  8999999999999999999999876 6666666665544456789999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++|.+|.|||+.++.......+.+.+.+.|.|...+++..++...+.+++.|.|  +.+|.+|.++-.++....|.+..
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEeccceeecCCCch
Confidence            9999999999999987654455788889999999999999999999999999999  45899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      .+.+|+|++.-+|.||.+++++|||||.|+-|+|.|-.......              ....+.. . ....|++|.+++
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~--------------f~~~l~~-~-e~~aPl~r~vt~  221 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD--------------FRKMLKE-N-EANAPLRRNVTI  221 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc--------------HHHHHHH-H-HhhCCccCCCCH
Confidence            99999999999999999999999999999999999976654321              1122222 2 225789999999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |||++..+||+|+.++.+||+++.||+||++..
T Consensus       222 eeVG~tA~fLlSdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         222 EEVGNTAAFLLSDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             HHhhhhHHHHhcchhcccccceEEEcCCceeec
Confidence            999999999999999999999999999998753

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.7e-38  Score=273.45  Aligned_cols=241  Identities=27%  Similarity=0.328  Sum_probs=192.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcC-CCceEEEeccCCCHHHH----HHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSS-SPLVTYLHCDVSLEQDI----QNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i----~~~~~~i~~~   89 (285)
                      ++++||||++|||++++++|+++|++|++++|+ .+.++.+.+++... +.++.++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998654 56666666666432 34677899999999865    5556666677


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhhHHHHHHHHHHhhcCC------CCceEEE
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDA-----------NEFDNIIRINVRGAALGMKYAAKVMVPR------RSGCIIS  152 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~ii~  152 (285)
                      ++++|+||||||....    .++.+.+.           ++|.+++++|+.+++.++++++|.|+.+      ..+.|++
T Consensus        82 ~g~iD~lv~nAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP----TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             cCCceEEEECCccCCC----CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence            8999999999997543    22322232           3588999999999999999999998543      2468999


Q ss_pred             EcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH
Q 040531          153 TASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE  232 (285)
Q Consensus       153 vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      ++|..+..+.++...|++||+|+++|+++++.|+.++||+|++|+||++.|+....               ....+.+. 
T Consensus       158 ~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---------------~~~~~~~~-  221 (267)
T TIGR02685       158 LCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---------------FEVQEDYR-  221 (267)
T ss_pred             ehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---------------hhHHHHHH-
Confidence            99998888888899999999999999999999999999999999999998763110               01111111 


Q ss_pred             HHhhhhccc-CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          233 LVRGLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       233 ~~~~~~~~~-~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                        .  ..+. .+..+|+|+++.++||+++.+.+++|+.+.+|||+++.+
T Consensus       222 --~--~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (267)
T TIGR02685       222 --R--KVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTR  266 (267)
T ss_pred             --H--hCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceeccC
Confidence              1  1233 367899999999999999999999999999999998653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-38  Score=267.62  Aligned_cols=249  Identities=29%  Similarity=0.438  Sum_probs=210.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+++++|+++||||+++||++++++|+++|++|++++|+.+..+...+.+.+...++.++.+|+++.++++.+++++.+.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46689999999999999999999999999999999999987777776666555557888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||..... ...++.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||..+..   +.+.|+
T Consensus        81 ~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~  156 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGM-KLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYG  156 (250)
T ss_pred             hCCCCEEEECCCCcCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccH
Confidence            99999999999986421 22466778899999999999999999999999999877789999999987653   457899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|++.+++++++|+.+.||++++++||.++|++.....+.               +........  .+..+..+|+|
T Consensus       157 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~d  219 (250)
T PRK07774        157 LAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPK---------------EFVADMVKG--IPLSRMGTPED  219 (250)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCH---------------HHHHHHHhc--CCCCCCcCHHH
Confidence            9999999999999999998999999999999999986532111               122222222  23455679999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +++.+++++++.....+|+.+++|+|.++.
T Consensus       220 ~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        220 LVGMCLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence            999999999887778899999999998764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.3e-38  Score=267.15  Aligned_cols=244  Identities=32%  Similarity=0.489  Sum_probs=206.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..+++|+++||||++|||++++++|+++|++|+++.+ +.+..++..+.+.+.+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999987655 445555665666555667999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....    ..+.+.+.+.+++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.++...|+
T Consensus        82 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  157 (247)
T PRK12935         82 FGKVDILVNNAGITRD----RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYS  157 (247)
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchH
Confidence            9999999999998643    456678889999999999999999999999999877788999999998888888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++++++++.|+.+.||+++.++||+++|++......                ........  ..+.+++..|||
T Consensus       158 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~ed  219 (247)
T PRK12935        158 AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE----------------EVRQKIVA--KIPKKRFGQADE  219 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH----------------HHHHHHHH--hCCCCCCcCHHH
Confidence            999999999999999999899999999999999987543210                11111111  123456789999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++++++++++ ..+++|+.+++|||..
T Consensus       220 va~~~~~~~~~-~~~~~g~~~~i~~g~~  246 (247)
T PRK12935        220 IAKGVVYLCRD-GAYITGQQLNINGGLY  246 (247)
T ss_pred             HHHHHHHHcCc-ccCccCCEEEeCCCcc
Confidence            99999999976 4589999999999963

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-38  Score=268.00  Aligned_cols=241  Identities=32%  Similarity=0.433  Sum_probs=202.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+++||||++|||++++++|+++|++|+++. |+.+.++...+.+...+.++.+++||+++.++++++++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999998765 566666666666655566799999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCCCC-Cccchh
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGLG-PHAYTV  170 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~~~-~~~Y~a  170 (285)
                      ++|||||.....   .++.+.+.++|+..+++|+.+++.+++++++.+..++   .++||++||..+..+.+. +..|++
T Consensus        83 ~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~  159 (248)
T PRK06947         83 ALVNNAGIVAPS---MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAG  159 (248)
T ss_pred             EEEECCccCCCC---CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHh
Confidence            999999986432   4567788999999999999999999999999886543   578999999888777664 578999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++++++++++.++.+.||+|+.++||+++|++......            ..   .... .. ...+.++..+||++
T Consensus       160 sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~------------~~---~~~~-~~-~~~~~~~~~~~e~v  222 (248)
T PRK06947        160 SKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ------------PG---RAAR-LG-AQTPLGRAGEADEV  222 (248)
T ss_pred             hHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC------------HH---HHHH-Hh-hcCCCCCCcCHHHH
Confidence            99999999999999999999999999999999998542100            01   1111 11 12456777899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ++.++|++++.+.+++|++|.+|||.
T Consensus       223 a~~~~~l~~~~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        223 AETIVWLLSDAASYVTGALLDVGGGR  248 (248)
T ss_pred             HHHHHHHcCccccCcCCceEeeCCCC
Confidence            99999999999999999999999984

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-38  Score=269.74  Aligned_cols=225  Identities=19%  Similarity=0.232  Sum_probs=193.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC-ceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP-LVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+++||||++|||+++|++|+ +|++|++++|+.+.++++.+++.+.+. ++.+++||++|.++++++++++.+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 599999999999999988888866554 488899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      ++|||||....    .++.+.+.+.+.+.+++|+.+++.+++.++|.|.++. .|+||++||..+..+.++...|+++|+
T Consensus        80 ~lv~nag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  155 (246)
T PRK05599         80 LAVVAFGILGD----QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKA  155 (246)
T ss_pred             EEEEecCcCCC----chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHH
Confidence            99999998643    2345667788889999999999999999999997664 699999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      |+++|+++++.|++++||+||+++||+|+|++.....+                             .....+|||+|+.
T Consensus       156 a~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-----------------------------~~~~~~pe~~a~~  206 (246)
T PRK05599        156 GLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-----------------------------APMSVYPRDVAAA  206 (246)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-----------------------------CCCCCCHHHHHHH
Confidence            99999999999999999999999999999998543210                             0112489999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCcc
Q 040531          254 ALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++++++...   ++.+.+++++.
T Consensus       207 ~~~~~~~~~~---~~~~~~~~~~~  227 (246)
T PRK05599        207 VVSAITSSKR---STTLWIPGRLR  227 (246)
T ss_pred             HHHHHhcCCC---CceEEeCccHH
Confidence            9999977532   56688887753

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.2e-38  Score=267.19  Aligned_cols=241  Identities=27%  Similarity=0.418  Sum_probs=205.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+++||||+++||++++++|+++|++|++++|+.. ...+..+.....+.++.++++|+++.+++.++++.+.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999854 22233333333345789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ++|||+|....    .++.+.+.++|++.+++|+.+++.+.+.+++.+++++.++||++||..+..+.++...|+++|+|
T Consensus        83 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a  158 (245)
T PRK12824         83 ILVNNAGITRD----SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAG  158 (245)
T ss_pred             EEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHH
Confidence            99999998643    56778899999999999999999999999999987778999999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++++++.++.|+.+.||++++++||+++|++.+...+                +.......  ..+.+...+++|+++.+
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~va~~~  220 (245)
T PRK12824        159 MIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP----------------EVLQSIVN--QIPMKRLGTPEEIAAAV  220 (245)
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH----------------HHHHHHHh--cCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999988653211                11111111  23566778999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+|+++.+.+++|+.+.+|||+.+
T Consensus       221 ~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        221 AFLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HHHcCccccCccCcEEEECCCeec
Confidence            999998889999999999999864

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-38  Score=265.66  Aligned_cols=242  Identities=32%  Similarity=0.421  Sum_probs=201.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|++|||||+++||++++++|+++|+.|++++++ ++..+...+.+.+.+.++.++++|++|.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999888744 445555555565555678899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCCCC-Cccch
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGLG-PHAYT  169 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~~~-~~~Y~  169 (285)
                      |+||||||.....   .++.+.+.++|++.+++|+.+++.+++++++.|.++.   .|+||++||..+..+.++ ...|+
T Consensus        82 d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~  158 (248)
T PRK06123         82 DALVNNAGILEAQ---MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYA  158 (248)
T ss_pred             CEEEECCCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchH
Confidence            9999999986432   4567789999999999999999999999999986542   578999999988887776 36799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+++++++++++.|+.++||++++|+||.+.|++......               .+.......  ..|.++..+|+|
T Consensus       159 ~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~---------------~~~~~~~~~--~~p~~~~~~~~d  221 (248)
T PRK06123        159 ASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE---------------PGRVDRVKA--GIPMGRGGTAEE  221 (248)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC---------------HHHHHHHHh--cCCCCCCcCHHH
Confidence            999999999999999999999999999999999997532110               011111111  235667789999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ++++++|++++...+++|+.+.+|||.
T Consensus       222 ~a~~~~~l~~~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        222 VARAILWLLSDEASYTTGTFIDVSGGR  248 (248)
T ss_pred             HHHHHHHHhCccccCccCCEEeecCCC
Confidence            999999999998889999999999973

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.1e-37  Score=264.19  Aligned_cols=240  Identities=28%  Similarity=0.375  Sum_probs=206.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |++|||||+++||++++++|+++|++|+++.| +.+..++..+++...+.++.++.+|+++.+++.++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 55555555555544456789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +||||+|....    .++.+.+.++|++.+++|+.+++.+.+++++.|++++.++||++||..+..+.++...|+++|++
T Consensus        81 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a  156 (242)
T TIGR01829        81 VLVNNAGITRD----ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAG  156 (242)
T ss_pred             EEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHH
Confidence            99999997643    45677899999999999999999999999999988778899999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.++++++.|+.++||++++++||++.|++.....+                +.......  ..+.++..+|+++++.+
T Consensus       157 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~a~~~  218 (242)
T TIGR01829       157 MIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE----------------DVLNSIVA--QIPVGRLGRPEEIAAAV  218 (242)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch----------------HHHHHHHh--cCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999987543211                11122221  24567788999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcc
Q 040531          255 LYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .||++++..+++|+.+.+|||++
T Consensus       219 ~~l~~~~~~~~~G~~~~~~gg~~  241 (242)
T TIGR01829       219 AFLASEEAGYITGATLSINGGLY  241 (242)
T ss_pred             HHHcCchhcCccCCEEEecCCcc
Confidence            99999988999999999999985

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=265.16  Aligned_cols=246  Identities=27%  Similarity=0.341  Sum_probs=206.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||||+++||++++++|+++|++|++++|+.. ..++..+.+...+.++.++++|+++.+++.++++.+.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998753 4445555554445678999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC------CceEEEEcccccccCCCCCcc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR------SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~ii~vss~~~~~~~~~~~~  167 (285)
                      |++|||||.....  ..++.+.+.++|++.+++|+.+++.+++++.+.|.++.      .++|+++||..+..+.++...
T Consensus        82 d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (256)
T PRK12745         82 DCLVNNAGVGVKV--RGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE  159 (256)
T ss_pred             CEEEECCccCCCC--CCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcc
Confidence            9999999975431  24677889999999999999999999999999997654      357999999998888888899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|++++++++.++.|+.++||++++++||++.|++......                 .+.........+..++.+|
T Consensus       160 Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK12745        160 YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-----------------KYDALIAKGLVPMPRWGEP  222 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-----------------hHHhhhhhcCCCcCCCcCH
Confidence            99999999999999999999999999999999999987543211                 1111111112355677899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+++++.+++++...+++|+.+.+|||.+.+
T Consensus       223 ~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        223 EDVARAVAALASGDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             HHHHHHHHHHhCCcccccCCCEEEECCCeecc
Confidence            99999999999998889999999999998864

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=264.11  Aligned_cols=246  Identities=28%  Similarity=0.420  Sum_probs=207.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |.++++++++||||+++||++++++|+++|++|++. .|+.+..++..+.+...+.++.++++|++|.+++.++++++.+
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999998775 6777777676666655456788999999999999999999988


Q ss_pred             Hc------CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC
Q 040531           89 KH------GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG  162 (285)
Q Consensus        89 ~~------~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~  162 (285)
                      ++      +++|++|||||....    .++.+.+.+.|+..+++|+.+++.+++.+++.|.+  .+++|++||..+..+.
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~  154 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQ----GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGF  154 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCC
Confidence            77      479999999997543    56677899999999999999999999999999853  4799999999888888


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|+++|+|++.+++++++++.++++++++++||+++|++.......           ..    ....... ..+.+
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-----------~~----~~~~~~~-~~~~~  218 (254)
T PRK12746        155 TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD-----------PE----IRNFATN-SSVFG  218 (254)
T ss_pred             CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC-----------hh----HHHHHHh-cCCcC
Confidence            88999999999999999999999999999999999999999986543211           11    1111111 23456


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +..+++|+++++.+++++.+.+++|+.+.++||++
T Consensus       219 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~~~  253 (254)
T PRK12746        219 RIGQVEDIADAVAFLASSDSRWVTGQIIDVSGGFC  253 (254)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCCcc
Confidence            77899999999999999888889999999999965

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=266.35  Aligned_cols=252  Identities=30%  Similarity=0.389  Sum_probs=211.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..+++|+++||||+++||+.++++|+++|++ |++++|+.+......+.+.+.+.++.++.+|+++.+++.++++.+.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999 999999988777776666555667889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|++|||+|....    .++.+.+.+.|+..+++|+.+++.+++++++.|.+++ .+++|++||..+..+.++...|
T Consensus        82 ~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  157 (260)
T PRK06198         82 FGRLDALVNAAGLTDR----GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAY  157 (260)
T ss_pred             hCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchh
Confidence            9999999999997543    4567789999999999999999999999999997654 5899999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+++++++++++.|+.+.+|++++++||++.|++........    .     ............  ..+.++..+|+
T Consensus       158 ~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~----~-----~~~~~~~~~~~~--~~~~~~~~~~~  226 (260)
T PRK06198        158 CASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREF----H-----GAPDDWLEKAAA--TQPFGRLLDPD  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhc----c-----CCChHHHHHHhc--cCCccCCcCHH
Confidence            999999999999999999999999999999999998753211100    0     000011111111  23567788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+++.+++|+++.+++++|+.|.+|||..
T Consensus       227 ~~a~~~~~l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        227 EVARAVAFLLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             HHHHHHHHHcChhhCCccCceEeECCccc
Confidence            99999999999999999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-38  Score=280.62  Aligned_cols=243  Identities=26%  Similarity=0.312  Sum_probs=205.7

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ++..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++.+.+
T Consensus         2 ~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          2 MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888888876677899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +++++|++|||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|
T Consensus        82 ~~g~iD~lInnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  157 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVF----GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAY  157 (334)
T ss_pred             HCCCCCEEEECCCcCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHH
Confidence            99999999999997533    56788899999999999999999999999999988778999999999999888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCC--CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          169 TVSKHAIVGLTKNTACELGK--YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~--~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      +++|+|+++|+++++.|+..  .+|++++|+||.++|++......                 .    ......+..+..+
T Consensus       158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-----------------~----~~~~~~~~~~~~~  216 (334)
T PRK07109        158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-----------------R----LPVEPQPVPPIYQ  216 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-----------------h----ccccccCCCCCCC
Confidence            99999999999999999975  47999999999999987542110                 0    0001123456789


Q ss_pred             HHHHHHHHHHHhcCCC--CcccccEEEecCCc
Q 040531          247 ARDIAEAALYLASDES--KYISGHNLVVDGGF  276 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~--~~~~G~~i~vdgG~  276 (285)
                      ||++|+++++++++..  -++.+....++.+.
T Consensus       217 pe~vA~~i~~~~~~~~~~~~vg~~~~~~~~~~  248 (334)
T PRK07109        217 PEVVADAILYAAEHPRRELWVGGPAKAAILGN  248 (334)
T ss_pred             HHHHHHHHHHHHhCCCcEEEeCcHHHHHHHHH
Confidence            9999999999997642  23444444444433

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-38  Score=269.89  Aligned_cols=239  Identities=26%  Similarity=0.370  Sum_probs=196.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.+++.++++++.+.
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888887777665667889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|
T Consensus        81 ~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y  156 (275)
T PRK05876         81 LGHVDVVFSNAGIVVG----GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAY  156 (275)
T ss_pred             cCCCCEEEECCCcCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchH
Confidence            9999999999998643    5678899999999999999999999999999997665 6899999999999899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+++|+.|++++||+|++|+||+++|++..........  .  .....   . ...... ........+|+
T Consensus       157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~--~~~~~---~-~~~~~~-~~~~~~~~~~~  227 (275)
T PRK05876        157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGA--A--CAQSS---T-TGSPGP-LPLQDDNLGVD  227 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCc--c--ccccc---c-cccccc-ccccccCCCHH
Confidence            99999999999999999999999999999999999986432110000  0  00000   0 000000 00112357999


Q ss_pred             HHHHHHHHHhcCC
Q 040531          249 DIAEAALYLASDE  261 (285)
Q Consensus       249 eva~~~~~l~s~~  261 (285)
                      ++|+.++..+...
T Consensus       228 dva~~~~~ai~~~  240 (275)
T PRK05876        228 DIAQLTADAILAN  240 (275)
T ss_pred             HHHHHHHHHHHcC
Confidence            9999998877443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-37  Score=262.76  Aligned_cols=246  Identities=28%  Similarity=0.444  Sum_probs=205.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +++++++|||||++|||+++++.|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            58899999999999999999999999999999999999888888777766667889999999999999999999988888


Q ss_pred             CccEEEECCCCCCCCCC----CCCC-CCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCC
Q 040531           92 RLDILFNNAGVLGNQSK----HKSI-TDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~----~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~  165 (285)
                      ++|++|||||.......    ...+ .+.+.++++..+++|+.+++.+.+.+++.|.++ ..+.|+++||.. ..+.++.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            99999999997542100    0112 677889999999999999999999999998765 467899998864 4667788


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++++++|+.|+.++||++++++||+++|++.....+                +.......  ..+.++..
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~  222 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP----------------EALERLEK--MIPVGRLG  222 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH----------------HHHHHHHh--cCCcCCCc
Confidence            9999999999999999999999999999999999999998643211                11111111  23556778


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+++.+.+|++  +.+++|++|.+|||+.+
T Consensus       223 ~~~~~a~~~~~l~~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        223 EPEEIAHTVRFIIE--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             CHHHHHHHHHHHHc--CCCcCCcEEEeCCCccC
Confidence            99999999999995  46899999999999853

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.2e-37  Score=260.19  Aligned_cols=245  Identities=39%  Similarity=0.579  Sum_probs=213.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+|.+|++|||||+++||++++++|+++|++|+++ +|+.+......+.+...+.++.++.+|+++.+++.++++++.+.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998 99888877777776555667899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||+|....    .++.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+
T Consensus        81 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~  156 (247)
T PRK05565         81 FGKIDILVNNAGISNF----GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYS  156 (247)
T ss_pred             hCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHH
Confidence            9999999999998632    566778999999999999999999999999999888789999999998888888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.+++.++.++.+.|+++++++||+++|++.+...+.                .......  ..+..+..+|++
T Consensus       157 ~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~----------------~~~~~~~--~~~~~~~~~~~~  218 (247)
T PRK05565        157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE----------------DKEGLAE--EIPLGRLGKPEE  218 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH----------------HHHHHHh--cCCCCCCCCHHH
Confidence            9999999999999999998999999999999999876543211                1111111  134456779999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++.+.+++++.+..++|+.+.+|+|++
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        219 IAKVVLFLASDDASYITGQIITVDGGWT  246 (247)
T ss_pred             HHHHHHHHcCCccCCccCcEEEecCCcc
Confidence            9999999999999999999999999975

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-37  Score=259.61  Aligned_cols=239  Identities=35%  Similarity=0.477  Sum_probs=201.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++++++||||+++||+++++.|+++|++|++++|+.+..++..+..     ...++.+|+++.+++.++++.    .
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~   75 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A   75 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h
Confidence            4689999999999999999999999999999999999987766555433     356789999999988887664    5


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|++|||||....    .+..+.+.++|++.+++|+.+++.+++++++.++++. .++||++||..+..+.++...|+
T Consensus        76 ~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  151 (245)
T PRK07060         76 GAFDGLVNCAGIASL----ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYC  151 (245)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhH
Confidence            789999999998643    4566678999999999999999999999999987554 48999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.+++.++.++.+.+|++++++||+++|++....+..           .   ........  ..+.+++.+|+|
T Consensus       152 ~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~~~~d  215 (245)
T PRK07060        152 ASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-----------P---QKSGPMLA--AIPLGRFAEVDD  215 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-----------H---HHHHHHHh--cCCCCCCCCHHH
Confidence            9999999999999999998999999999999999986543221           0   11111222  235677899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++++++++++.+.+++|+.|.+|||+..
T Consensus       216 ~a~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        216 VAAPILFLLSDAASMVSGVSLPVDGGYTA  244 (245)
T ss_pred             HHHHHHHHcCcccCCccCcEEeECCCccC
Confidence            99999999999999999999999999865

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=258.40  Aligned_cols=242  Identities=31%  Similarity=0.481  Sum_probs=205.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC----chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID----DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++++++||||+++||++++++|+++|++|++++|.    .+..++..+++...+.++.++.+|+++.++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            45788999999999999999999999999999997653    34444444555445567899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHH-HhhcCCCCceEEEEcccccccCCCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAA-KVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      .+.++++|++|||||....    .++.+.+.++|++.+++|+.+++.+++++. +.+.+++.+++|++||..+..+.++.
T Consensus        82 ~~~~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  157 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATD----AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQ  157 (249)
T ss_pred             HHHhCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCC
Confidence            9998999999999998654    567778999999999999999999999999 67766667899999999988888889


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|++++.+++.++.|+++.||++++++||+++|++.......                  .....  ..+.....
T Consensus       158 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------------------~~~~~--~~~~~~~~  217 (249)
T PRK12827        158 VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT------------------EHLLN--PVPVQRLG  217 (249)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH------------------HHHHh--hCCCcCCc
Confidence            99999999999999999999998899999999999999876532110                  11111  13445566


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      +++++++.+++++++.+.+++|+.+.+|||+
T Consensus       218 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        218 EPDEVAALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence            9999999999999998899999999999996

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=259.69  Aligned_cols=240  Identities=25%  Similarity=0.281  Sum_probs=200.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ...+|++|||||++|||++++++|+++|++|+++.++ .+.++.+.+.+...+.++.++++|++|.+++.++++++.+.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999887664 455566666665556678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.+++++.+.+.++..+++|+++|..+..+.|....|++
T Consensus        86 ~~iD~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~  161 (258)
T PRK09134         86 GPITLLVNNASLFEY----DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTL  161 (258)
T ss_pred             CCCCEEEECCcCCCC----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHH
Confidence            999999999997643    4667789999999999999999999999999998777889999999877777777789999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|++++++.++.|+.+. |+|++++||++.|+....                  ...+.....  ..+.++..+|+|+
T Consensus       162 sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~------------------~~~~~~~~~--~~~~~~~~~~~d~  220 (258)
T PRK09134        162 SKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS------------------PEDFARQHA--ATPLGRGSTPEEI  220 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC------------------hHHHHHHHh--cCCCCCCcCHHHH
Confidence            9999999999999999875 999999999998854210                  011111111  2345667899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++++++.  .+++|+.+.+|||.+.
T Consensus       221 a~~~~~~~~~--~~~~g~~~~i~gg~~~  246 (258)
T PRK09134        221 AAAVRYLLDA--PSVTGQMIAVDGGQHL  246 (258)
T ss_pred             HHHHHHHhcC--CCcCCCEEEECCCeec
Confidence            9999999974  5789999999999753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=8.7e-37  Score=292.25  Aligned_cols=260  Identities=32%  Similarity=0.424  Sum_probs=213.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ...|++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+.+.  ..++..+++|+++.+++.++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988887777666532  2357889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+||||||....    .++.+.+.++|+..+++|+.+++.+.+.+++.|++++ .++||++||..+..+.++..
T Consensus       489 ~~~g~iDilV~nAG~~~~----~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~  564 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATS----SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNAS  564 (676)
T ss_pred             HhcCCCcEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCH
Confidence            999999999999997543    5677788999999999999999999999999997664 57999999999888888999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch--hhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS--MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      .|+++|+|+++++++++.|++++||+||+|+||.|.++  +....+.. ........   . .+...+.+.. ..+.++.
T Consensus       565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~-~~~~~~~~---~-~~~~~~~~~~-r~~l~r~  638 (676)
T TIGR02632       565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWRE-ERAAAYGI---P-ADELEEHYAK-RTLLKRH  638 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchh-hhhhcccC---C-hHHHHHHHHh-cCCcCCC
Confidence            99999999999999999999999999999999999653  32111100 00000000   0 1112222222 3577888


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++|+|+|++++||+++.+.++||+++.+|||++..
T Consensus       639 v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~~  673 (676)
T TIGR02632       639 IFPADIAEAVFFLASSKSEKTTGCIITVDGGVPAA  673 (676)
T ss_pred             cCHHHHHHHHHHHhCCcccCCcCcEEEECCCchhc
Confidence            99999999999999988889999999999998753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.2e-36  Score=257.40  Aligned_cols=247  Identities=34%  Similarity=0.492  Sum_probs=213.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+......+.+.+.+.++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999998887777777766666799999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCccchh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~~Y~a  170 (285)
                      ++|++|||+|....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.+++|++||..+. .+.++...|++
T Consensus        83 ~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~  158 (251)
T PRK12826         83 RLDILVANAGIFPL----TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAA  158 (251)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHH
Confidence            99999999988644    45667889999999999999999999999999987778999999999887 67788889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.+++.++.++.+.|++++.++||.++|+..+.....                .+...... ..+.+++.+++|+
T Consensus       159 sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~dv  221 (251)
T PRK12826        159 SKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA----------------QWAEAIAA-AIPLGRLGEPEDI  221 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch----------------HHHHHHHh-cCCCCCCcCHHHH
Confidence            999999999999999988899999999999999875432110                10111111 2355678899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+++.+++++...+++|+.+.+|||.+..
T Consensus       222 a~~~~~l~~~~~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        222 AAAVLFLASDEARYITGQTLPVDGGATLP  250 (251)
T ss_pred             HHHHHHHhCccccCcCCcEEEECCCccCC
Confidence            99999999888889999999999998753

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=6.2e-37  Score=269.02  Aligned_cols=239  Identities=20%  Similarity=0.161  Sum_probs=195.3

Q ss_pred             EEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           19 IVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        19 lItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      |||||++|||++++++|+++| ++|++++|+.+.+++..+++.....++.++++|+++.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998888777777654455788899999999999999999998889999999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccC--------------
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMG--------------  161 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~--------------  161 (285)
                      ||||+....   .++.+.+.++|++.|++|+.+++.+++.++|.|++++  .|+||++||..+..+              
T Consensus        81 nnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         81 CNAAVYLPT---AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             ECCCcCCCC---CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            999985321   3456788999999999999999999999999998765  689999999866421              


Q ss_pred             ---------------------CCCCccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCc-cchhhhhhhcccccccC
Q 040531          162 ---------------------GLGPHAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGV-ATSMLVNAWKSCEDCMD  218 (285)
Q Consensus       162 ---------------------~~~~~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~  218 (285)
                                           .++..+|++||+|...+++.+++++.+ .||+|++++||+| .|++.+...+       
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~-------  230 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIP-------  230 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccH-------
Confidence                                 123467999999999999999999975 6999999999999 7888653211       


Q ss_pred             CCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          219 SGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                            .. ......+.  ..+.++..+||+.|+.+++++++...+.+|+.+..||+.
T Consensus       231 ------~~-~~~~~~~~--~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        231 ------LF-RLLFPPFQ--KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             ------HH-HHHHHHHH--HHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence                  00 01111111  123456789999999999999988888999999998874

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-36  Score=261.35  Aligned_cols=236  Identities=27%  Similarity=0.287  Sum_probs=190.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++|+++||||++|||++++++|+++|++|++++|+.+.+++..+      ..+.++.+|++|.++++.+++++.+.+++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999999999999877654432      24788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||....    .++.+.+.++++..+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|
T Consensus        75 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (273)
T PRK06182         75 IDVLVNNAGYGSY----GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATK  150 (273)
T ss_pred             CCEEEECCCcCCC----CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHH
Confidence            9999999998643    567788999999999999999999999999999888789999999998887888888999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +++++++++++.|+.++||++++++||+++|++........... ..........+.+.+.+.. ..+.++..+|+++|+
T Consensus       151 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vA~  228 (273)
T PRK06182        151 FALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKT-SGNGAYAEQAQAVAASMRS-TYGSGRLSDPSVIAD  228 (273)
T ss_pred             HHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhccc-ccccchHHHHHHHHHHHHH-hhccccCCCHHHHHH
Confidence            99999999999999999999999999999999864321110000 0000001111111111221 124567789999999


Q ss_pred             HHHHHhcC
Q 040531          253 AALYLASD  260 (285)
Q Consensus       253 ~~~~l~s~  260 (285)
                      .++++++.
T Consensus       229 ~i~~~~~~  236 (273)
T PRK06182        229 AISKAVTA  236 (273)
T ss_pred             HHHHHHhC
Confidence            99999975

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-36  Score=257.41  Aligned_cols=244  Identities=31%  Similarity=0.438  Sum_probs=205.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|+++||||+++||++++++|+++|++|++++|+.+.++...+.+.  ..++.++++|+++.+++..+++++.++++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999999888777766662  35688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ++|||+|....    .++.+.+.++|...+++|+.+++.+++++++.+.+++.++||++||..+.. ..+...|+++|+|
T Consensus        80 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~a  154 (257)
T PRK07074         80 VLVANAGAARA----ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKAG  154 (257)
T ss_pred             EEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHHH
Confidence            99999998543    456678899999999999999999999999999877789999999976653 3456789999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.++++++.|+.++||+|++++||+++|++......             +..+.......  ..+..++..++|+++++
T Consensus       155 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~~--~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        155 LIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA-------------ANPQVFEELKK--WYPLQDFATPDDVANAV  219 (257)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc-------------cChHHHHHHHh--cCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999987542111             01111111111  23556788999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      ++|+++...+++|+.+.+|||+..+.
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~  245 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGN  245 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCC
Confidence            99999888899999999999988754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-36  Score=279.31  Aligned_cols=243  Identities=28%  Similarity=0.365  Sum_probs=204.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ...++++++|||||++|||++++++|+++|++|+++++..  +.+.+..+++     ...++++|+++.++++++++.+.
T Consensus       205 ~~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             ccCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998843  3333333322     23578999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|+||||||+...    .++.+.+.++|+..+++|+.+++.+.+++.+.+..++.++||++||..+..+.++...
T Consensus       280 ~~~g~id~vi~~AG~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~  355 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRD----KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTN  355 (450)
T ss_pred             HhCCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChH
Confidence            999999999999998654    5677889999999999999999999999999665566799999999998888889999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|+++++|+++++.|+.++||++|+|+||.++|++......                 ...+.... ..+..+...|
T Consensus       356 Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~-----------------~~~~~~~~-~~~l~~~~~p  417 (450)
T PRK08261        356 YAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF-----------------ATREAGRR-MNSLQQGGLP  417 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch-----------------hHHHHHhh-cCCcCCCCCH
Confidence            99999999999999999999999999999999999988643210                 00111111 1345566799


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+++++.||+++.+.++||++|.+|||..+.
T Consensus       418 ~dva~~~~~l~s~~~~~itG~~i~v~g~~~~~  449 (450)
T PRK08261        418 VDVAETIAWLASPASGGVTGNVVRVCGQSLLG  449 (450)
T ss_pred             HHHHHHHHHHhChhhcCCCCCEEEECCCcccC
Confidence            99999999999999999999999999987653

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=254.97  Aligned_cols=238  Identities=27%  Similarity=0.336  Sum_probs=206.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |++.+++|++|||||+++||++++++|+++|++|++++|+.+...+..+++..  ..+..+.+|++|.+++.++++++.+
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA--DALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh--cCceEEEeecCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999998877666655533  2456778999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++||++|....    .++.+.+.+++++.+++|+.+++.+++++++.+.+++.+++|++||..+..+.++...|
T Consensus        79 ~~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  154 (239)
T PRK12828         79 QFGRLDALVNIAGAFVW----GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAY  154 (239)
T ss_pred             HhCCcCEEEECCcccCc----CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchh
Confidence            99999999999997533    45566789999999999999999999999999987778999999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.++.++.+++|+++.++||++.|++.....+.                          .....+++++
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~--------------------------~~~~~~~~~~  208 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD--------------------------ADFSRWVTPE  208 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc--------------------------hhhhcCCCHH
Confidence            99999999999999999988999999999999999864322110                          1123357899


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++++++++++.+.+++|+.+.+|||.+.
T Consensus       209 dva~~~~~~l~~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        209 QIAAVIAFLLSDEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             HHHHHHHHHhCcccccccceEEEecCCEeC
Confidence            999999999998888899999999999864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-36  Score=255.37  Aligned_cols=249  Identities=28%  Similarity=0.318  Sum_probs=204.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ||+++++++|||||+++||++++++|+++|++|++..|+ .+........+.+.+.++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999998877654 4444454555555456788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||||....    .++.+.+.+.+++.+++|+.+++.+++++.+.+++  .+++|++||..+..+.++...|
T Consensus        81 ~~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y  154 (252)
T PRK06077         81 RYGVADILVNNAGLGLF----SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIY  154 (252)
T ss_pred             HcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHH
Confidence            99999999999998543    45677888999999999999999999999999854  4899999999998888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++++++.++.|+++ +|+++.+.||++.|++.......        .. .. .+.   .... ..+.++.++||
T Consensus       155 ~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~--------~~-~~-~~~---~~~~-~~~~~~~~~~~  219 (252)
T PRK06077        155 GAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKV--------LG-MS-EKE---FAEK-FTLMGKILDPE  219 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhc--------cc-cc-HHH---HHHh-cCcCCCCCCHH
Confidence            99999999999999999988 89999999999999986543211        00 00 011   1111 12345678999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      |+|++++++++.  ..++|+.+++|+|+++.+.
T Consensus       220 dva~~~~~~~~~--~~~~g~~~~i~~g~~~~~~  250 (252)
T PRK06077        220 EVAEFVAAILKI--ESITGQVFVLDSGESLKGG  250 (252)
T ss_pred             HHHHHHHHHhCc--cccCCCeEEecCCeeccCC
Confidence            999999999964  4679999999999987653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=7.8e-36  Score=253.33  Aligned_cols=246  Identities=33%  Similarity=0.479  Sum_probs=208.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++++|+++||||+++||++++++|+++|++|+++.|+.. ..+...+.+...+.++.++.+|+++.+++.++++++.+.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999988887665 344555555445667899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++||++|....    .+..+.+.+.+++.+++|+.+++.+.+.+++.+.+++.++++++||..+..+.++...|+
T Consensus        81 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~  156 (248)
T PRK05557         81 FGGVDILVNNAGITRD----NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYA  156 (248)
T ss_pred             cCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhH
Confidence            9999999999997643    455677889999999999999999999999999877778999999998888888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.+++.++.++.+.++++++++||+++|++......                +.......  ..+.++..+++|
T Consensus       157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~  218 (248)
T PRK05557        157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE----------------DVKEAILA--QIPLGRLGQPEE  218 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh----------------HHHHHHHh--cCCCCCCcCHHH
Confidence            999999999999999999889999999999999987543211                11111111  124456789999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++++.+|+++.+.+++|+.+.+|||+++
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        219 IASAVAFLASDEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             HHHHHHHHcCcccCCccccEEEecCCccC
Confidence            99999999988888999999999999876

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-36  Score=259.82  Aligned_cols=217  Identities=33%  Similarity=0.432  Sum_probs=191.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|+++++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.    ++.++++|+++.++++++++.+.+.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999888777666552    57889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||....    .++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++
T Consensus        77 ~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  152 (273)
T PRK07825         77 GPIDVLVNNAGVMPV----GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCA  152 (273)
T ss_pred             CCCCEEEECCCcCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHH
Confidence            999999999998643    5677889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++++++++++.|+.+.||++++|+||++.|++......                           .......+|+++
T Consensus       153 sKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~---------------------------~~~~~~~~~~~v  205 (273)
T PRK07825        153 SKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG---------------------------AKGFKNVEPEDV  205 (273)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc---------------------------ccCCCCCCHHHH
Confidence            99999999999999999999999999999999988643210                           011235689999


Q ss_pred             HHHHHHHhcCCC
Q 040531          251 AEAALYLASDES  262 (285)
Q Consensus       251 a~~~~~l~s~~~  262 (285)
                      |+.+++++.+..
T Consensus       206 a~~~~~~l~~~~  217 (273)
T PRK07825        206 AAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHhCCC
Confidence            999998886643

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.5e-36  Score=253.71  Aligned_cols=233  Identities=26%  Similarity=0.394  Sum_probs=203.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCC--CHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVS--LEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s--~~~~i~~~~~~i~~   88 (285)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.+......+++.+.. .++.++.+|++  +.+++.++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            5699999999999999999999999999999999999888877777765433 45677777775  78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||.....   .++.+.+.+.|++.+++|+.+++.+++++++.|.+++.++||++||..+..+.++...|
T Consensus        89 ~~~~id~vi~~Ag~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y  165 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGEL---GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAY  165 (247)
T ss_pred             HhCCCCEEEECCcccCCC---CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCccc
Confidence            999999999999976432   46677889999999999999999999999999988888999999999888888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.++.++...+|++++++||.+.|++....++.                          ....++.+|+
T Consensus       166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~--------------------------~~~~~~~~~~  219 (247)
T PRK08945        166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG--------------------------EDPQKLKTPE  219 (247)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc--------------------------ccccCCCCHH
Confidence            99999999999999999999999999999999999875433221                          1123467999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEec
Q 040531          249 DIAEAALYLASDESKYISGHNLVVD  273 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vd  273 (285)
                      |+++.++|++++.+++++|+++...
T Consensus       220 ~~~~~~~~~~~~~~~~~~g~~~~~~  244 (247)
T PRK08945        220 DIMPLYLYLMGDDSRRKNGQSFDAQ  244 (247)
T ss_pred             HHHHHHHHHhCccccccCCeEEeCC
Confidence            9999999999999999999998654

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-36  Score=252.13  Aligned_cols=233  Identities=25%  Similarity=0.373  Sum_probs=195.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |.+|+++||||+++||++++++|+++|++|++++|+.+..      .     ...++++|+++.++++++++++.+.+ +
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~-~   68 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH-P   68 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC-C
Confidence            4679999999999999999999999999999999987541      1     12468999999999999999988876 6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|++|||+|....    .++.+.+.++|++.+++|+.+++.+.++++|.|++++.++||++||.. ..+.++...|+++|
T Consensus        69 ~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK  143 (234)
T PRK07577         69 VDAIVNNVGIALP----QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAK  143 (234)
T ss_pred             CcEEEECCCCCCC----CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHH
Confidence            8999999998644    466778899999999999999999999999999877789999999985 45667788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +++++++++++.|++++||++++|+||++.|++.+...+.           ..  +.......  ..+.++..+|+|+|+
T Consensus       144 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-----------~~--~~~~~~~~--~~~~~~~~~~~~~a~  208 (234)
T PRK07577        144 SALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV-----------GS--EEEKRVLA--SIPMRRLGTPEEVAA  208 (234)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccccc-----------ch--hHHHHHhh--cCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999986543211           00  11111111  134566779999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .+++|+++...+++|+.+.+|||.+
T Consensus       209 ~~~~l~~~~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        209 AIAFLLSDDAGFITGQVLGVDGGGS  233 (234)
T ss_pred             HHHHHhCcccCCccceEEEecCCcc
Confidence            9999999888899999999999965

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-36  Score=260.41  Aligned_cols=225  Identities=24%  Similarity=0.261  Sum_probs=190.6

Q ss_pred             ccccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHH
Q 040531            5 TEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      ...+..+.+++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.+++.++++
T Consensus        30 ~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~  109 (293)
T PRK05866         30 RPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA  109 (293)
T ss_pred             CCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            34555667899999999999999999999999999999999999988888887776656678899999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCC--CHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-C
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDF--DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-G  161 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~  161 (285)
                      ++.+.++++|++|||||....    .++.+.  +.++++..+++|+.+++.++++++|.|++++.++||++||.++.. +
T Consensus       110 ~~~~~~g~id~li~~AG~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  185 (293)
T PRK05866        110 DVEKRIGGVDILINNAGRSIR----RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA  185 (293)
T ss_pred             HHHHHcCCCCEEEECCCCCCC----cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC
Confidence            999999999999999998643    333332  468899999999999999999999999888889999999976654 3


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .++...|+++|+|+++++++++.|+.++||+|++++||+|+|++.......                           ..
T Consensus       186 ~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~---------------------------~~  238 (293)
T PRK05866        186 SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY---------------------------DG  238 (293)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc---------------------------cC
Confidence            577789999999999999999999999999999999999999986432100                           00


Q ss_pred             CCCCCHHHHHHHHHHHhcC
Q 040531          242 GVTLKARDIAEAALYLASD  260 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~  260 (285)
                      ....+||++|+.++..+..
T Consensus       239 ~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        239 LPALTADEAAEWMVTAART  257 (293)
T ss_pred             CCCCCHHHHHHHHHHHHhc
Confidence            1135889999888887754

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-36  Score=259.53  Aligned_cols=249  Identities=20%  Similarity=0.286  Sum_probs=206.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCc-eEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.+ +.++++|+++.++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999988887777776544443 56689999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      ++|||+|....    .++.+.+.++|+..+++|+.+++.++++++|.|.++ ..++||++||..+..+.++...|+++|+
T Consensus        81 ~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  156 (272)
T PRK07832         81 VVMNIAGISAW----GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKF  156 (272)
T ss_pred             EEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHH
Confidence            99999997543    567788999999999999999999999999999754 3589999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      |+++++++++.|+.+++|+|++++||.++|++........       ..  ...+.......   ...++..+|+++|+.
T Consensus       157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-------~~--~~~~~~~~~~~---~~~~~~~~~~~vA~~  224 (272)
T PRK07832        157 GLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAG-------VD--REDPRVQKWVD---RFRGHAVTPEKAAEK  224 (272)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccc-------cC--cchhhHHHHHH---hcccCCCCHHHHHHH
Confidence            9999999999999999999999999999999865431100       00  00011111111   123556899999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCcccccc
Q 040531          254 ALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +++++. ...+++++.+.+++|+.+...
T Consensus       225 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~  251 (272)
T PRK07832        225 ILAGVE-KNRYLVYTSPDIRALYWFKRK  251 (272)
T ss_pred             HHHHHh-cCCeEEecCcchHHHHHHHhc
Confidence            999995 457899999999999877653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.7e-35  Score=249.74  Aligned_cols=245  Identities=34%  Similarity=0.500  Sum_probs=211.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|.+|++|||||+++||+.++++|+++|++|++++|+++..+...+.+.+.+.++.++.+|+++.+++.++++++.+.+
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36778999999999999999999999999999999999888877777776667789999999999999999999998889


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++||++|....    .+..+.+.+++++.++.|+.+++.+++++.+.+.+.+.++||++||..+..+.++...|+.
T Consensus        81 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~  156 (246)
T PRK05653         81 GALDILVNNAGITRD----ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSA  156 (246)
T ss_pred             CCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHh
Confidence            999999999997543    4566778999999999999999999999999997777789999999888888888889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.++++++.++.+.++++++++||.+.+++......                ........  ..+.+..++++|+
T Consensus       157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~dv  218 (246)
T PRK05653        157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE----------------EVKAEILK--EIPLGRLGQPEEV  218 (246)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH----------------HHHHHHHh--cCCCCCCcCHHHH
Confidence            99999999999999999889999999999999987643110                01111111  1244667899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ++.+.+++++...+++|+.+.+|||..
T Consensus       219 a~~~~~~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        219 ANAVAFLASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             HHHHHHHcCchhcCccCCEEEeCCCee
Confidence            999999999888899999999999975

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=252.30  Aligned_cols=259  Identities=33%  Similarity=0.480  Sum_probs=212.0

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +++.++++|++|||||+++||+.++++|+++|++|++++|+++..++..+...+.  ++.++.+|+++++++..+++++.
T Consensus         4 ~~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          4 DLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hHhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHH
Confidence            4666799999999999999999999999999999999999888777665555322  67889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-ceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+|||++|.....   .+..+.+.++|.+.+++|+.+++.+++.+++.+...+. ++|+++||..+..+.++..
T Consensus        82 ~~~~~~d~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~  158 (264)
T PRK12829         82 ERFGGLDVLVNNAGIAGPT---GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRT  158 (264)
T ss_pred             HHhCCCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCc
Confidence            9999999999999986332   45667889999999999999999999999998876655 7899999988888888888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+.+|++++.+++.++.++.+.++++++++||+++|++...........  ....   ...........  .+..++++
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~--~~~~~~~~  231 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQ--LGIG---LDEMEQEYLEK--ISLGRMVE  231 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhc--cCCC---hhHHHHHHHhc--CCCCCCCC
Confidence            99999999999999999999888999999999999999876543221100  0011   11111122221  24556889


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++.+.+++++....++|+.+.+|||...
T Consensus       232 ~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        232 PEDIAATALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEeCCCccc
Confidence            99999999999988778899999999999753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-35  Score=251.38  Aligned_cols=241  Identities=29%  Similarity=0.408  Sum_probs=201.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+++||||+++||++++++|+++|++|+++ .|+.+..++....+...+.++..+++|++|.++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            589999999999999999999999998774 6777666666666655556788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC---CCceEEEEcccccccCCCC-Cccchh
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR---RSGCIISTASVASLMGGLG-PHAYTV  170 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~ii~vss~~~~~~~~~-~~~Y~a  170 (285)
                      ++|||+|.....   .++.+.+.++|+..+++|+.+++.+++.+++.+.++   +.+++|++||..+..+.++ ...|++
T Consensus        82 ~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~  158 (247)
T PRK09730         82 ALVNNAGILFTQ---CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAA  158 (247)
T ss_pred             EEEECCCCCCCC---CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHh
Confidence            999999975332   456778999999999999999999999999998765   3578999999988777765 468999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.+++.++.|+.++||++++++||.++|++......               .+.......  ..+.++..+|+|+
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~dv  221 (247)
T PRK09730        159 SKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE---------------PGRVDRVKS--NIPMQRGGQPEEV  221 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC---------------HHHHHHHHh--cCCCCCCcCHHHH
Confidence            99999999999999999999999999999999997432110               011111111  1345566799999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ++.+++++++...+++|+.+.+|||.
T Consensus       222 a~~~~~~~~~~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        222 AQAIVWLLSDKASYVTGSFIDLAGGK  247 (247)
T ss_pred             HHHHHhhcChhhcCccCcEEecCCCC
Confidence            99999999988889999999999973

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=8.8e-36  Score=251.73  Aligned_cols=224  Identities=23%  Similarity=0.211  Sum_probs=184.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      |+++||||++|||++++++|+++|  ..|++.+|+....      .  ...++.++++|+++.++++++    .+.++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~----~~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQL----SEQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHH----HHhcCCC
Confidence            579999999999999999999985  5566666654321      1  135788999999999998774    4556899


Q ss_pred             cEEEECCCCCCCCC--CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---CCCCCccc
Q 040531           94 DILFNNAGVLGNQS--KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---GGLGPHAY  168 (285)
Q Consensus        94 d~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---~~~~~~~Y  168 (285)
                      |+||||||......  ...++.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++++++||..+..   +.+++..|
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchh
Confidence            99999999874321  23467788999999999999999999999999999877778999998865432   34567799


Q ss_pred             hhhHHHHHHHHHHHHHHhCC--CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          169 TVSKHAIVGLTKNTACELGK--YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~--~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      +++|+|+++|+++|+.|+.+  .+|+|++|+||+++|++......                          ..+.++..+
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~--------------------------~~~~~~~~~  202 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ--------------------------NVPKGKLFT  202 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh--------------------------ccccCCCCC
Confidence            99999999999999999986  68999999999999998643110                          123455679


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |||+|+.+++++++..++++|+.+.+|||+.
T Consensus       203 ~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        203 PEYVAQCLLGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHHHHHHHHHHcCChhhCCcEEeeCCcCC
Confidence            9999999999999998899999999999987

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=4.5e-35  Score=250.01  Aligned_cols=254  Identities=34%  Similarity=0.470  Sum_probs=210.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+.+...+.++.++++|+++.+++..+++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999998888777776655556789999999999999999999999889999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ++|||+|....    .+..+.+.+++++++++|+.+++.+++.+++.|++.+.+++|++||..+..+.+....|+.+|++
T Consensus        81 ~vi~~a~~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a  156 (255)
T TIGR01963        81 ILVNNAGIQHV----APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHG  156 (255)
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHH
Confidence            99999997643    45567788999999999999999999999999987777899999998888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.+++.++.++.+.+|+++.++||.+.|++...........    .. ......+.+.... ..+...+++++|+|+++
T Consensus       157 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~  230 (255)
T TIGR01963       157 LIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKT----RG-IPEEQVIREVMLP-GQPTKRFVTVDEVAETA  230 (255)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcc----cC-CCchHHHHHHHHc-cCccccCcCHHHHHHHH
Confidence            999999999999888999999999999999865443221000    00 0111111121211 12345578999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++....++|+.+.+|||+.+
T Consensus       231 ~~~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       231 LFLASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             HHHcCccccCccceEEEEcCcccc
Confidence            999988767789999999999874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=261.77  Aligned_cols=239  Identities=20%  Similarity=0.162  Sum_probs=189.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+.    ++.++++|++|.++++++++++.+.++
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999999888777666552    378899999999999999999999899


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-----------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-----------  160 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-----------  160 (285)
                      ++|+||||||....      ..+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||.+...           
T Consensus        99 ~iD~li~nAg~~~~------~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  172 (315)
T PRK06196         99 RIDILINNAGVMAC------PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFT  172 (315)
T ss_pred             CCCEEEECCCCCCC------CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCcc
Confidence            99999999997532      2245678899999999999999999999999877778999999975532           


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          161 -GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       161 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                       +.++...|++||+|++.+++.++.+++++||++++|+||++.|++.+.....            ..  ...........
T Consensus       173 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~------------~~--~~~~~~~~~~~  238 (315)
T PRK06196        173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE------------EQ--VALGWVDEHGN  238 (315)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh------------hh--hhhhhhhhhhh
Confidence             2234568999999999999999999999999999999999999986432110            00  00011111011


Q ss_pred             cc-CCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          240 LK-GVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       240 ~~-~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      +. .+..+|+++|..++||++......+|..+..|.
T Consensus       239 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        239 PIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             hhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCC
Confidence            22 145689999999999997654444555565554

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.4e-35  Score=281.25  Aligned_cols=241  Identities=27%  Similarity=0.367  Sum_probs=202.1

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .....++++++|||||+||||++++++|+++|++|++++|+.+.++++.+.+.+.+.++.++++|++|.+++.++++++.
T Consensus       308 ~~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        308 RPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34456889999999999999999999999999999999999998888888876666789999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+||||||+...    .++.+.+.++|++++++|+.|++.++++++|.|++++ .|+||++||.++..+.++..
T Consensus       388 ~~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  463 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMA----GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLP  463 (582)
T ss_pred             HhcCCCcEEEECCccCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCc
Confidence            999999999999998644    5677889999999999999999999999999998765 58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++++++++.|++++||+|++|+||+|+|++........       .. .+..+.......  ..+..+..+
T Consensus       464 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~-~~~~~~~~~~~~--~~~~~~~~~  533 (582)
T PRK05855        464 AYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAG-------AD-AEDEARRRGRAD--KLYQRRGYG  533 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCC-------cc-cchhhhHHhhhh--hhccccCCC
Confidence            99999999999999999999999999999999999999876532110       00 011111111111  112234568


Q ss_pred             HHHHHHHHHHHhcCCC
Q 040531          247 ARDIAEAALYLASDES  262 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~  262 (285)
                      ||++|+.++++++...
T Consensus       534 p~~va~~~~~~~~~~~  549 (582)
T PRK05855        534 PEKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999997643

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6e-35  Score=247.87  Aligned_cols=246  Identities=33%  Similarity=0.509  Sum_probs=207.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..++.|++|||||+++||++++++|+++|++|+++.|+.. ..+...+.+...+.++.++.+|+++.+++.++++++.+.
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999888666544 444444555445667899999999999999999999888


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++.+|++||+||....    .++.+.+.+++++.+++|+.+++.+.+.+++.+.+.+.+++|++||..+..+.++...|+
T Consensus        82 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~  157 (249)
T PRK12825         82 FGRIDILVNNAGIFED----KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYA  157 (249)
T ss_pred             cCCCCEEEECCccCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHH
Confidence            8999999999996533    456677899999999999999999999999999877788999999998888888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      .+|++++++++.++.++.+.|++++.++||.+.|++.......                .....  ....+.++..+++|
T Consensus       158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----------------~~~~~--~~~~~~~~~~~~~d  219 (249)
T PRK12825        158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE----------------AREAK--DAETPLGRSGTPED  219 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch----------------hHHhh--hccCCCCCCcCHHH
Confidence            9999999999999999998899999999999999986543211                00000  11235566889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++.+.+++++...+++|++|.++||+..
T Consensus       220 va~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        220 IARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            99999999988888999999999999864

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=248.41  Aligned_cols=228  Identities=26%  Similarity=0.239  Sum_probs=196.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..+...+.+.+.+.++.++++|+++.+++.++++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999888777777776556778999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |++|||||....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|+
T Consensus        85 d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (241)
T PRK07454         85 DVLINNAGMAYT----GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKA  160 (241)
T ss_pred             CEEEECCCccCC----CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHH
Confidence            999999997643    4667788999999999999999999999999998777899999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++.+++.++.|++++||++++|+||++.|++.......                   .     .....+..+|+++|++
T Consensus       161 ~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-------------------~-----~~~~~~~~~~~~va~~  216 (241)
T PRK07454        161 ALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-------------------A-----DFDRSAMLSPEQVAQT  216 (241)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc-------------------c-----ccccccCCCHHHHHHH
Confidence            999999999999999999999999999999885321000                   0     0011345799999999


Q ss_pred             HHHHhcCCCCcccccE
Q 040531          254 ALYLASDESKYISGHN  269 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~  269 (285)
                      ++++++++...+.++.
T Consensus       217 ~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        217 ILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHcCCccceeeeE
Confidence            9999997766555443

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-35  Score=252.45  Aligned_cols=235  Identities=22%  Similarity=0.227  Sum_probs=191.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++.+.+..   +.++.++++|++|.+++.++++.+.+.++++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH---PDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc---CCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999987765544322   4568889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.++..+.++...|+++|+
T Consensus        80 d~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~  155 (277)
T PRK06180         80 DVLVNNAGYGHE----GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKF  155 (277)
T ss_pred             CEEEECCCccCC----cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHH
Confidence            999999998543    5677889999999999999999999999999998877889999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh-hhcccCCCCCHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-LANLKGVTLKARDIAE  252 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~eeva~  252 (285)
                      ++++++++++.|+.++|+++++|+||+++|++.........      ................ ...+..++.+|+++|+
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  229 (277)
T PRK06180        156 ALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTP------RSIADYDALFGPIRQAREAKSGKQPGDPAKAAQ  229 (277)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCC------CCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHH
Confidence            99999999999999999999999999999987543221100      0001111111111110 1123455779999999


Q ss_pred             HHHHHhcCC
Q 040531          253 AALYLASDE  261 (285)
Q Consensus       253 ~~~~l~s~~  261 (285)
                      ++++++...
T Consensus       230 ~~~~~l~~~  238 (277)
T PRK06180        230 AILAAVESD  238 (277)
T ss_pred             HHHHHHcCC
Confidence            999998664

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-35  Score=252.34  Aligned_cols=243  Identities=25%  Similarity=0.284  Sum_probs=197.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+....+.+   +.++.++++|+++.++++++++.+.+.++++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988776655443   4468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |++|||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+++|+
T Consensus        79 d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKa  154 (275)
T PRK08263         79 DIVVNNAGYGLF----GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKW  154 (275)
T ss_pred             CEEEECCCCccc----cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHH
Confidence            999999998644    5677889999999999999999999999999998877889999999999988888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC-CCHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT-LKARDIAE  252 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eeva~  252 (285)
                      +++.+++.++.|++++||++++++||+++|++........       ...... +........ ..+..+. .+|+|+++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~-------~~~~~~-~~~~~~~~~-~~~~~~~~~~p~dva~  225 (275)
T PRK08263        155 ALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRA-------TPLDAY-DTLREELAE-QWSERSVDGDPEAAAE  225 (275)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccC-------CCchhh-hhHHHHHHH-HHHhccCCCCHHHHHH
Confidence            9999999999999999999999999999999875221110       000111 111111111 1233445 79999999


Q ss_pred             HHHHHhcCCCCcccccEEEecC
Q 040531          253 AALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      .+++++++..  ..++.+...+
T Consensus       226 ~~~~l~~~~~--~~~~~~~~~~  245 (275)
T PRK08263        226 ALLKLVDAEN--PPLRLFLGSG  245 (275)
T ss_pred             HHHHHHcCCC--CCeEEEeCch
Confidence            9999997643  3555555444

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=7.3e-35  Score=253.33  Aligned_cols=248  Identities=25%  Similarity=0.361  Sum_probs=197.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++.+.+.
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999988888777777655667899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC------ceEEEEcccccccCCC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS------GCIISTASVASLMGGL  163 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~ii~vss~~~~~~~~  163 (285)
                      ++++|+||||||....    .++.+.+.++|+..+++|+.+++.++++++|.|+++..      ++||++||..+..+.+
T Consensus        81 ~g~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  156 (287)
T PRK06194         81 FGAVHLLFNNAGVGAG----GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP  156 (287)
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC
Confidence            9999999999998654    56677899999999999999999999999999986654      7999999999988888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCC--CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGK--YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~--~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      +.+.|+++|++++.++++++.|+..  .+|++++++||+|+|++.................. ............. ...
T Consensus       157 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~  234 (287)
T PRK06194        157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPT-RSQLIAQAMSQKA-VGS  234 (287)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCcccc-chhhHHHHHHHhh-hhc
Confidence            8899999999999999999999874  57999999999999998764321111111100000 0111111111111 111


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCc
Q 040531          242 GVTLKARDIAEAALYLASDESKY  264 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~  264 (285)
                      + ..+++|+|+.++.++.....+
T Consensus       235 ~-~~s~~dva~~i~~~~~~~~~~  256 (287)
T PRK06194        235 G-KVTAEEVAQLVFDAIRAGRFY  256 (287)
T ss_pred             c-CCCHHHHHHHHHHHHHcCCeE
Confidence            2 369999999999987554433

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=250.92  Aligned_cols=216  Identities=25%  Similarity=0.264  Sum_probs=186.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.... ++.++++|+++.+++.++++++.++++.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4789999999999999999999999999999999888877766664333 789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ++|||||.....   ....+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++
T Consensus        81 ~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a  157 (257)
T PRK07024         81 VVIANAGISVGT---LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAA  157 (257)
T ss_pred             EEEECCCcCCCc---cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHH
Confidence            999999975321   22233688999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.++++++.|++++||++++++||+++|++.....                            .+.....+|+++++.+
T Consensus       158 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------------------------~~~~~~~~~~~~a~~~  209 (257)
T PRK07024        158 AIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP----------------------------YPMPFLMDADRFAARA  209 (257)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC----------------------------CCCCCccCHHHHHHHH
Confidence            999999999999999999999999999998754210                            0111235889999999


Q ss_pred             HHHhcCCC
Q 040531          255 LYLASDES  262 (285)
Q Consensus       255 ~~l~s~~~  262 (285)
                      +..+.+..
T Consensus       210 ~~~l~~~~  217 (257)
T PRK07024        210 ARAIARGR  217 (257)
T ss_pred             HHHHhCCC
Confidence            88886544

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.7e-35  Score=246.59  Aligned_cols=224  Identities=29%  Similarity=0.386  Sum_probs=195.6

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ||.++++++++||||+++||++++++|+++|++|++++|+.+..++..+++...+.++.++++|+++.+++.++++++.+
T Consensus         1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35668899999999999999999999999999999999998887777777755566789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|++|||+|....    .++.+.+.++|++.+++|+.+++.+.+++.+.+.+++.+++|++||..+..+.++...|
T Consensus        81 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  156 (239)
T PRK07666         81 ELGSIDILINNAGISKF----GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAY  156 (239)
T ss_pred             HcCCccEEEEcCccccC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcch
Confidence            99999999999997543    45677899999999999999999999999999988888999999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|++.+++.++.|+.++||++++|+||.+.|++.......                         .......++++
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-------------------------~~~~~~~~~~~  211 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT-------------------------DGNPDKVMQPE  211 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc-------------------------ccCCCCCCCHH
Confidence            99999999999999999999999999999999999875432100                         00113457899


Q ss_pred             HHHHHHHHHhcCC
Q 040531          249 DIAEAALYLASDE  261 (285)
Q Consensus       249 eva~~~~~l~s~~  261 (285)
                      ++|+.++.+++..
T Consensus       212 ~~a~~~~~~l~~~  224 (239)
T PRK07666        212 DLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999664

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-35  Score=249.13  Aligned_cols=240  Identities=21%  Similarity=0.261  Sum_probs=193.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc-
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL-   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i-   93 (285)
                      |+++||||++|||++++++|+++|++|++++|+. +.+.+..+   +...++.++++|+++.++++++++++.+.++.. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            6899999999999999999999999999999986 33333322   224578899999999999999999988776532 


Q ss_pred             ---cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCCccch
Q 040531           94 ---DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        94 ---d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                         +++|+|||...+.   .++.+.+.++|.+.+++|+.+++.+++.++|.|++. ..++||++||..+..+.++...|+
T Consensus        79 ~~~~~~v~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  155 (251)
T PRK06924         79 VSSIHLINNAGMVAPI---KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYC  155 (251)
T ss_pred             CCceEEEEcceecccC---cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHh
Confidence               2899999986432   467788999999999999999999999999999764 357999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          170 VSKHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ++|+|++++++.++.|++  +.+|+|++|.||+++|++........          .+.....+....  ..+.++..+|
T Consensus       156 ~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~  223 (251)
T PRK06924        156 SSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSS----------KEDFTNLDRFIT--LKEEGKLLSP  223 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcC----------cccchHHHHHHH--HhhcCCcCCH
Confidence            999999999999999985  46899999999999999865432110          000011111111  1245678899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      +|+|+.+++++++. .+++|+.+.+|+
T Consensus       224 ~dva~~~~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        224 EYVAKALRNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             HHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence            99999999999874 789999999986

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=251.24  Aligned_cols=238  Identities=20%  Similarity=0.186  Sum_probs=190.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..+++|+++||||+||||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++++|+++.+++..+++++.+.
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999998754 455555555544567889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-----cCCCC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-----MGGLG  164 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-----~~~~~  164 (285)
                      ++.+|++|||||....    .   ..   ++...+++|+.+++.+++++.|.|.+  .+++|++||..+.     .+.+.
T Consensus        82 ~~~~d~vi~~ag~~~~----~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~  149 (248)
T PRK07806         82 FGGLDALVLNASGGME----S---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPE  149 (248)
T ss_pred             CCCCcEEEECCCCCCC----C---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcc
Confidence            9999999999986421    1   11   24567899999999999999999853  4799999996543     22345


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      +..|+++|++++.+++.++.|+++++|+|+++.||++.|++.......        .    ......+    ...+.+++
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~--------~----~~~~~~~----~~~~~~~~  213 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNR--------L----NPGAIEA----RREAAGKL  213 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhcc--------C----CHHHHHH----HHhhhccc
Confidence            678999999999999999999999999999999999999876543211        0    0011111    12356788


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++|+|+|++++++++  +.+++|++|.++||...
T Consensus       214 ~~~~dva~~~~~l~~--~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        214 YTVSEFAAEVARAVT--APVPSGHIEYVGGADYF  245 (248)
T ss_pred             CCHHHHHHHHHHHhh--ccccCccEEEecCccce
Confidence            999999999999997  45789999999999764

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=250.55  Aligned_cols=255  Identities=23%  Similarity=0.289  Sum_probs=204.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+..+...+.+...  ..++.++.+|++|.++++. ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46899999999999999999999999999999999988877776655432  2468999999999999999 89999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||....    ..+.+.+.+++++.+++|+.+++.++++++|.|++.+.++||++||..+..+.++...|++
T Consensus        80 ~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  155 (280)
T PRK06914         80 GRIDLLVNNAGYANG----GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVS  155 (280)
T ss_pred             CCeeEEEECCccccc----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHH
Confidence            999999999997654    4567788999999999999999999999999998777899999999988888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++++++++++.|+.++||++++++||+++|++...........   ....................+.+++.+|+|+
T Consensus       156 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  232 (280)
T PRK06914        156 SKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQ---SETTSPYKEYMKKIQKHINSGSDTFGNPIDV  232 (280)
T ss_pred             hHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccc---cccccchHHHHHHHHHHHhhhhhccCCHHHH
Confidence            9999999999999999999999999999999999765322110000   0000111112222222222345667899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++++++++...   +..+++++|+..
T Consensus       233 a~~~~~~~~~~~~---~~~~~~~~~~~~  257 (280)
T PRK06914        233 ANLIVEIAESKRP---KLRYPIGKGVKL  257 (280)
T ss_pred             HHHHHHHHcCCCC---CcccccCCchHH
Confidence            9999999987643   245777766654

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.5e-35  Score=279.75  Aligned_cols=258  Identities=33%  Similarity=0.459  Sum_probs=215.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..++||++|||||+||||++++++|+++|++|++++|+.+.++...+.+... .++.++.+|+++.+++.++++++.+.+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999998887777766443 578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|++|||||....    .++.+.+.++|+..+++|+.+++.+++++.+.|++++ .|+||++||..+..+.++...|+
T Consensus       497 g~iDvvI~~AG~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~  572 (681)
T PRK08324        497 GGVDIVVSNAGIAIS----GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYG  572 (681)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHH
Confidence            999999999998654    5677889999999999999999999999999998766 48999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCc--cchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGV--ATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v--~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ++|++++.+++.++.|++++||++|+|+||.|  .|++....+.... .....   ... +...+.+.. ..+.++.+.+
T Consensus       573 asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~-~~~~g---~~~-~~~~~~~~~-~~~l~~~v~~  646 (681)
T PRK08324        573 AAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEAR-AAAYG---LSE-EELEEFYRA-RNLLKREVTP  646 (681)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhh-hhhcc---CCh-HHHHHHHHh-cCCcCCccCH
Confidence            99999999999999999999999999999999  7876543221100 00000   011 111122222 3466778999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|+++++++++...+.+|+.+++|||....
T Consensus       647 ~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        647 EDVAEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCCchhc
Confidence            99999999999887888999999999998653

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=250.95  Aligned_cols=235  Identities=22%  Similarity=0.247  Sum_probs=187.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc-CCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH-GRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~-~~i   93 (285)
                      +|+++||||++|||++++++|+++|++|++++|+.+.++.+.+      ..+.++.+|++|.++++.+++++.+.+ +++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            6899999999999999999999999999999999877655432      247789999999999999999987765 689


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |++|||||....    .++.+.+.+++++.+++|+.|++.+++.++|.|++++.++||++||..+..+.++...|+++|+
T Consensus        78 d~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  153 (277)
T PRK05993         78 DALFNNGAYGQP----GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKF  153 (277)
T ss_pred             cEEEECCCcCCC----CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHH
Confidence            999999998644    5677889999999999999999999999999998888899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH---HhhhhcccCCCCCHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL---VRGLANLKGVTLKARDI  250 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~eev  250 (285)
                      |+++++++++.|+.++||+|++|+||+++|++................  ....+.+...   ............+||++
T Consensus       154 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  231 (277)
T PRK05993        154 AIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIEN--SVHRAAYQQQMARLEGGGSKSRFKLGPEAV  231 (277)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhcccc--chhHHHHHHHHHHHHhhhhccccCCCHHHH
Confidence            999999999999999999999999999999987654321100000000  0001111111   11111112224689999


Q ss_pred             HHHHHHHhcCC
Q 040531          251 AEAALYLASDE  261 (285)
Q Consensus       251 a~~~~~l~s~~  261 (285)
                      |+.++..+...
T Consensus       232 a~~i~~a~~~~  242 (277)
T PRK05993        232 YAVLLHALTAP  242 (277)
T ss_pred             HHHHHHHHcCC
Confidence            99999988654

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=4.2e-35  Score=258.22  Aligned_cols=190  Identities=26%  Similarity=0.321  Sum_probs=163.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|++++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..  .++..+.+|+++  ++.+.++++.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            68999999999999999999999999999999999999998888876542  467889999985  23333444444444


Q ss_pred             --CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-C-CCCCcc
Q 040531           92 --RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-G-GLGPHA  167 (285)
Q Consensus        92 --~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~-~~~~~~  167 (285)
                        ++|++|||||+....  ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+.. + .|....
T Consensus       130 ~~didilVnnAG~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~  207 (320)
T PLN02780        130 GLDVGVLINNVGVSYPY--ARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAV  207 (320)
T ss_pred             CCCccEEEEecCcCCCC--CcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchH
Confidence              467999999986321  1457788999999999999999999999999999888889999999988864 3 578899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      |++||+|+++++++|+.|++++||+|++|+||+|+|++..
T Consensus       208 Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        208 YAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            9999999999999999999999999999999999999864

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=243.25  Aligned_cols=229  Identities=23%  Similarity=0.268  Sum_probs=188.8

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEEE
Q 040531           19 IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFN   98 (285)
Q Consensus        19 lItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~   98 (285)
                      |||||++|||++++++|+++|++|++++|+.+.++...+.+. .+.++.++.+|+++.+++.+++++    .+++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence            699999999999999999999999999999887777666654 255688999999999999888765    478999999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHHHH
Q 040531           99 NAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL  178 (285)
Q Consensus        99 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l  178 (285)
                      |+|....    .++.+.+.+++++++++|+.+++.+.+  .+.+  ++.++||++||.++..+.++...|+++|++++++
T Consensus        76 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  147 (230)
T PRK07041         76 TAADTPG----GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEAL  147 (230)
T ss_pred             CCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHH
Confidence            9998643    467778999999999999999999999  4444  3468999999999988888899999999999999


Q ss_pred             HHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHh
Q 040531          179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLA  258 (285)
Q Consensus       179 ~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~  258 (285)
                      +++++.|+.+  |++++++||+++|++.......            ...........  ..+.++..+|+|+|+++++|+
T Consensus       148 ~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~  211 (230)
T PRK07041        148 ARGLALELAP--VRVNTVSPGLVDTPLWSKLAGD------------AREAMFAAAAE--RLPARRVGQPEDVANAILFLA  211 (230)
T ss_pred             HHHHHHHhhC--ceEEEEeecccccHHHHhhhcc------------chHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999986  9999999999999986432111            01111222222  234567789999999999999


Q ss_pred             cCCCCcccccEEEecCCccc
Q 040531          259 SDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       259 s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++  .+++|+.+.+|||...
T Consensus       212 ~~--~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        212 AN--GFTTGSTVLVDGGHAI  229 (230)
T ss_pred             cC--CCcCCcEEEeCCCeec
Confidence            74  5899999999999764

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=256.25  Aligned_cols=242  Identities=22%  Similarity=0.190  Sum_probs=190.3

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+.+.+.  +.++.++++|++|.++++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999988877776666432  356889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc------
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM------  160 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~------  160 (285)
                      .+.++++|+||||||....      ..+.+.++++..+++|+.+++.+++.++|.|++.+.++||++||.++..      
T Consensus        90 ~~~~~~iD~li~nAg~~~~------~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~  163 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYT------PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHF  163 (306)
T ss_pred             HhhCCCCCEEEECCccccC------CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCc
Confidence            9999999999999997532      2345678899999999999999999999999877778999999976543      


Q ss_pred             -------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEE--eCCCccchhhhhhhcccccccCCCCCchHHHHHHH
Q 040531          161 -------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI--SPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME  231 (285)
Q Consensus       161 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v--~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                             +.++...|++||+|++.+++.+++++++.+++++++  +||+|+|++.+....                 ...
T Consensus       164 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~-----------------~~~  226 (306)
T PRK06197        164 DDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPR-----------------ALR  226 (306)
T ss_pred             cccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcH-----------------HHH
Confidence                   123456899999999999999999998888777665  799999998754211                 011


Q ss_pred             HHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ..+..+....  ..+|++-+...++++.+ ..+.+|..+..||+.
T Consensus       227 ~~~~~~~~~~--~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        227 PVATVLAPLL--AQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHHHhhh--cCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence            1111111111  23667667666666643 346689888877654

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=247.42  Aligned_cols=222  Identities=23%  Similarity=0.324  Sum_probs=192.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+++++++|||||++|||++++++|+++|++|++++|+.+.+++..+++ ..+.++.++++|++|.++++.+++.+.+ +
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~   78 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M   78 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence            4678999999999999999999999999999999999988887777766 4456789999999999999999998876 7


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||||....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.+++|+++|..+..+.++...|++
T Consensus        79 ~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  154 (263)
T PRK09072         79 GGINVLINNAGVNHF----ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCA  154 (263)
T ss_pred             CCCCEEEECCCCCCc----cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHH
Confidence            899999999997533    5677889999999999999999999999999998877799999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++.+++++++.|+.++||+|++++||+++|++.......                    ...   ....+..+|+++
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~--------------------~~~---~~~~~~~~~~~v  211 (263)
T PRK09072        155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA--------------------LNR---ALGNAMDDPEDV  211 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc--------------------ccc---cccCCCCCHHHH
Confidence            999999999999999999999999999999999875432110                    000   112245689999


Q ss_pred             HHHHHHHhcCC
Q 040531          251 AEAALYLASDE  261 (285)
Q Consensus       251 a~~~~~l~s~~  261 (285)
                      |+.+++++...
T Consensus       212 a~~i~~~~~~~  222 (263)
T PRK09072        212 AAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHhCC
Confidence            99999999764

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=248.74  Aligned_cols=226  Identities=25%  Similarity=0.369  Sum_probs=194.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |+++||||+||||++++++|+++|++|++++|+.+.++...+.+.+.+.++.++++|+++.+++.++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999888888877666778899999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      ||||||....    .++.+.+.++|++.+++|+.+++.+.+.++|.|.+++.++||++||..+..+.++.+.|+++|+++
T Consensus        81 lI~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~  156 (270)
T PRK05650         81 IVNNAGVASG----GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGV  156 (270)
T ss_pred             EEECCCCCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence            9999998644    567788999999999999999999999999999877789999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      ++++++++.|+.+.||++++|+||+++|++.......          ............      ....++|+++|+.++
T Consensus       157 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~------~~~~~~~~~vA~~i~  220 (270)
T PRK05650        157 VALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP----------NPAMKAQVGKLL------EKSPITAADIADYIY  220 (270)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCccccCcccccccC----------chhHHHHHHHHh------hcCCCCHHHHHHHHH
Confidence            9999999999999999999999999999986543211          001111111111      123469999999999


Q ss_pred             HHhcCC
Q 040531          256 YLASDE  261 (285)
Q Consensus       256 ~l~s~~  261 (285)
                      ..+.+.
T Consensus       221 ~~l~~~  226 (270)
T PRK05650        221 QQVAKG  226 (270)
T ss_pred             HHHhCC
Confidence            998764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.7e-35  Score=237.13  Aligned_cols=238  Identities=28%  Similarity=0.360  Sum_probs=198.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |+++||++++||+.||||++++++|+++|..+.+++-+.+..+ ...++.+.  ..++.+++||+++..+++++++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999888877777644 34445443  35699999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCCCCC
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGLGP  165 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~~~~  165 (285)
                      .+|.+|++||+||+.            +..+|+..+++|+.|...-.+.++|+|.++.   +|-||++||..+..|.|..
T Consensus        80 ~fg~iDIlINgAGi~------------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~  147 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL------------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF  147 (261)
T ss_pred             HhCceEEEEcccccc------------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc
Confidence            999999999999985            3566999999999999999999999998764   6789999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHh--CCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          166 HAYTVSKHAIVGLTKNTACEL--GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~--~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +.|++||+++.+|+|++|...  .+.||++++++||++.|.+...+.....        -.+..+.+.+..+..    + 
T Consensus       148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~--------~~e~~~~~~~~l~~~----~-  214 (261)
T KOG4169|consen  148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGG--------YLEYSDSIKEALERA----P-  214 (261)
T ss_pred             hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCC--------cccccHHHHHHHHHc----c-
Confidence            999999999999999998864  5679999999999999999887643210        011223333333322    1 


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .-+|.+++..++-+.+.   ..+|+.+.+|+|..
T Consensus       215 ~q~~~~~a~~~v~aiE~---~~NGaiw~v~~g~l  245 (261)
T KOG4169|consen  215 KQSPACCAINIVNAIEY---PKNGAIWKVDSGSL  245 (261)
T ss_pred             cCCHHHHHHHHHHHHhh---ccCCcEEEEecCcE
Confidence            23789999999999866   46999999999973

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=3.7e-34  Score=243.84  Aligned_cols=233  Identities=24%  Similarity=0.312  Sum_probs=192.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++++||||++|||++++++|+++|++|++++|+.+.++...+.+   +.++.++.+|+++.++++++++++.+.++++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999988776665544   456889999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      +|||||.....   .++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        78 vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  154 (248)
T PRK10538         78 LVNNAGLALGL---EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFV  154 (248)
T ss_pred             EEECCCccCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHH
Confidence            99999975321   456678999999999999999999999999999877788999999998888888889999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh-hcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNA-WKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +++++.++.|+.+++|++++|.||++.|++.... ...           .  ........     ......+|+|+|+++
T Consensus       155 ~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~-----------~--~~~~~~~~-----~~~~~~~~~dvA~~~  216 (248)
T PRK10538        155 RQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-----------D--DGKAEKTY-----QNTVALTPEDVSEAV  216 (248)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC-----------c--HHHHHhhc-----cccCCCCHHHHHHHH
Confidence            9999999999999999999999999985543221 110           0  01111111     112346999999999


Q ss_pred             HHHhcCCCCcccccEEEe
Q 040531          255 LYLASDESKYISGHNLVV  272 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~v  272 (285)
                      +|+++....+.+++...+
T Consensus       217 ~~l~~~~~~~~~~~~~~~  234 (248)
T PRK10538        217 WWVATLPAHVNINTLEMM  234 (248)
T ss_pred             HHHhcCCCcccchhhccc
Confidence            999988877777776543

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=253.55  Aligned_cols=248  Identities=22%  Similarity=0.221  Sum_probs=190.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.+.  +.++.++++|+++.++++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            356799999999999999999999999999999999999999888888877543  346889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----  161 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----  161 (285)
                      .+.++++|+||||||....     +..+.+.+.|+..|++|+.+++.+++.++|.|++. .++||++||..+..+     
T Consensus        88 ~~~~~~iD~li~nAG~~~~-----~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~  161 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTP-----PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWD  161 (313)
T ss_pred             HHhCCCccEEEECCccccC-----CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcc
Confidence            9999999999999998642     23356788999999999999999999999999754 689999999876543     


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHh--CCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH
Q 040531          162 -------GLGPHAYTVSKHAIVGLTKNTACEL--GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE  232 (285)
Q Consensus       162 -------~~~~~~Y~asKaa~~~l~~~la~e~--~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                             .++...|+.||+|+..+++.|+.++  .++||+||+++||+|.|++.......     ..     .....+..
T Consensus       162 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~-----~~~~~~~~  231 (313)
T PRK05854        162 DLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEV-----GR-----DKDTLMVR  231 (313)
T ss_pred             cccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccccccc-----cc-----chhHHHHH
Confidence                   2345689999999999999999865  45789999999999999986431100     00     00000111


Q ss_pred             HHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEec
Q 040531          233 LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVD  273 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vd  273 (285)
                      ....+.....-..++++-+...++++..... .+|..+.-+
T Consensus       232 ~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        232 LIRSLSARGFLVGTVESAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             HHHHHhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence            1111100000134788899999988854322 256666544

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-34  Score=245.58  Aligned_cols=236  Identities=20%  Similarity=0.223  Sum_probs=194.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +.+...|+++||||+++||++++++|+++|++|++++|+.+.+++..+.+...+.++.++++|+++.+++.++++++.+.
T Consensus         5 ~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          5 EPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            33567889999999999999999999999999999999888777766666555667889999999999999999999998


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|++|||||....    .+..+.+.+.+++.+++|+.+++.+++++++.|+++..++||++||..+..+.++...|+
T Consensus        85 ~~~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (274)
T PRK07775         85 LGEIEVLVSGAGDTYF----GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYG  160 (274)
T ss_pred             cCCCCEEEECCCcCCC----cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHH
Confidence            9999999999997643    456677899999999999999999999999999877788999999998888888888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.+++.+++++.+.||++++++||+++|++.......            ..................+++.++|
T Consensus       161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~d  228 (274)
T PRK07775        161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAE------------VIGPMLEDWAKWGQARHDYFLRASD  228 (274)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChh------------hhhHHHHHHHHhcccccccccCHHH
Confidence            9999999999999999998899999999999999864321110            0001111111100112345789999


Q ss_pred             HHHHHHHHhcCC
Q 040531          250 IAEAALYLASDE  261 (285)
Q Consensus       250 va~~~~~l~s~~  261 (285)
                      +|++++++++..
T Consensus       229 va~a~~~~~~~~  240 (274)
T PRK07775        229 LARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHhcCC
Confidence            999999999764

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6e-36  Score=229.80  Aligned_cols=244  Identities=32%  Similarity=0.475  Sum_probs=212.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ...+|-++||||+.||+|++.+++|+++|++|++.+-..+...+..+++   +.++.+.++|++++++++.++.....+|
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            3568999999999999999999999999999999999999888888887   8899999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCC--CCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC------CceEEEEcccccccCC
Q 040531           91 GRLDILFNNAGVLGNQSKH--KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR------SGCIISTASVASLMGG  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~ii~vss~~~~~~~  162 (285)
                      |++|.+|||||+......+  ..-...+.|+|++.+++|+.|+|++++.-.-.|-+++      .|.||++.|.+++.+.
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence            9999999999986432111  1223457899999999999999999999888887653      5789999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      .+.++|++||.|+.+++.-+|++++..|||++.|.||.++||++...                 +|.+.......-....
T Consensus       162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl-----------------pekv~~fla~~ipfps  224 (260)
T KOG1199|consen  162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL-----------------PEKVKSFLAQLIPFPS  224 (260)
T ss_pred             cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh-----------------hHHHHHHHHHhCCCch
Confidence            99999999999999999999999999999999999999999998643                 3455555444444557


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      |+..|.|.+..+....  +..|++|++|..||-.
T Consensus       225 rlg~p~eyahlvqaii--enp~lngevir~dgal  256 (260)
T KOG1199|consen  225 RLGHPHEYAHLVQAII--ENPYLNGEVIRFDGAL  256 (260)
T ss_pred             hcCChHHHHHHHHHHH--hCcccCCeEEEeccee
Confidence            7889999999998888  5579999999999854

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3.9e-34  Score=251.86  Aligned_cols=242  Identities=18%  Similarity=0.137  Sum_probs=189.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+|+++||||++|||++++++|+++| ++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 99999999998888777776544556888999999999999999999888899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccC---------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMG---------  161 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~---------  161 (285)
                      +|++|||||+....   .+..+.+.++|+.++++|+.+++.+++.++|.|++++  .++||++||..+..+         
T Consensus        82 iD~lI~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        82 LDALVCNAAVYFPT---AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCEEEECCCccccC---ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence            99999999975321   2334568899999999999999999999999997653  589999999866321         


Q ss_pred             ------------------------CCCCccchhhHHHHHHHHHHHHHHhC-CCCcEEEEEeCCCc-cchhhhhhhccccc
Q 040531          162 ------------------------GLGPHAYTVSKHAIVGLTKNTACELG-KYGIRVNCISPFGV-ATSMLVNAWKSCED  215 (285)
Q Consensus       162 ------------------------~~~~~~Y~asKaa~~~l~~~la~e~~-~~~i~v~~v~pg~v-~t~~~~~~~~~~~~  215 (285)
                                              ..+..+|++||+|+..+++.+++++. +.||+|++|+||.| .|++.+....    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~----  234 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVP----  234 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccH----
Confidence                                    12346799999999999999999985 46899999999999 6988653211    


Q ss_pred             ccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          216 CMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                               ........ +..  .......+|++.++.+++++.+.....+|..+..++
T Consensus       235 ---------~~~~~~~~-~~~--~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       235 ---------LFRTLFPP-FQK--YITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             ---------HHHHHHHH-HHH--HHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence                     00001111 111  112235689999999999887654445777665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=246.29  Aligned_cols=215  Identities=22%  Similarity=0.263  Sum_probs=181.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchh-hHHHHHHhhcCCC-ceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAA-GIALADSLLSSSP-LVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~-~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++|++|||||++|||+++|++|+++| ++|++++|+.+. +++..+++.+.+. ++.++++|++|.+++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            67899999999999999999999995 999999999886 7777777765443 789999999999999999998876 5


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|++|||+|.....    .....+.++..+.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++
T Consensus        86 g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~  161 (253)
T PRK07904         86 GDVDVAIVAFGLLGDA----EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGS  161 (253)
T ss_pred             CCCCEEEEeeecCCch----hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHH
Confidence            8999999999985321    111124556668899999999999999999999888899999999988777778889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+.+|+++++.|+.++||+|++++||+++|++......                             .....+|+++
T Consensus       162 sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-----------------------------~~~~~~~~~~  212 (253)
T PRK07904        162 TKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-----------------------------APLTVDKEDV  212 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-----------------------------CCCCCCHHHH
Confidence            99999999999999999999999999999999988653210                             0113589999


Q ss_pred             HHHHHHHhcCCC
Q 040531          251 AEAALYLASDES  262 (285)
Q Consensus       251 a~~~~~l~s~~~  262 (285)
                      |+.++..+.+..
T Consensus       213 A~~i~~~~~~~~  224 (253)
T PRK07904        213 AKLAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHHHcCC
Confidence            999999986643

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=240.56  Aligned_cols=245  Identities=27%  Similarity=0.349  Sum_probs=198.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.++++++|||||+++||++++++|+++|++|++++|+.+ ..+...+.+.+. ...+.++.+|+++.+++..+++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999999998643 344444444332 34588899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||....    .++.+.+.+++++.+++|+.+++.+++++.+.+.++ .+.+++++|..+..+.++...|
T Consensus        82 ~~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y  156 (249)
T PRK09135         82 AFGRLDALVNNASSFYP----TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVY  156 (249)
T ss_pred             HcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhH
Confidence            99999999999997643    455667888999999999999999999999988644 5788888887777778888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.++.++.+ +++++++.||+++||+....+..               .........  .+..+..+++
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~  218 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDE---------------EARQAILAR--TPLKRIGTPE  218 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCH---------------HHHHHHHhc--CCcCCCcCHH
Confidence            99999999999999999976 69999999999999985432111               111111111  2445567899


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+++++.+++.+ ..+.+|+++++|+|...+
T Consensus       219 d~a~~~~~~~~~-~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        219 DIAEAVRFLLAD-ASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HHHHHHHHHcCc-cccccCcEEEECCCeecc
Confidence            999999999875 567899999999998653

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=246.17  Aligned_cols=229  Identities=26%  Similarity=0.325  Sum_probs=189.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++++++||||+||||++++++|+++|++|++++|+.+....        ..++.++++|++|.++++++++.+.+.++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999998765422        2357889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |+||||||....    .++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.|....|+++|+
T Consensus        75 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  150 (270)
T PRK06179         75 DVLVNNAGVGLA----GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKH  150 (270)
T ss_pred             CEEEECCCCCCC----cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHH
Confidence            999999998643    5677789999999999999999999999999998888899999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++++++.++.|++++||++++++||++.|++........       ...................+..+..+|+++|+.
T Consensus       151 a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  223 (270)
T PRK06179        151 AVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPD-------SPLAEYDRERAVVSKAVAKAVKKADAPEVVADT  223 (270)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCC-------CcchhhHHHHHHHHHHHHhccccCCCHHHHHHH
Confidence            9999999999999999999999999999999876432210       000111111111111112234556799999999


Q ss_pred             HHHHhcCC
Q 040531          254 ALYLASDE  261 (285)
Q Consensus       254 ~~~l~s~~  261 (285)
                      ++++++..
T Consensus       224 ~~~~~~~~  231 (270)
T PRK06179        224 VVKAALGP  231 (270)
T ss_pred             HHHHHcCC
Confidence            99999764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=6.6e-34  Score=242.52  Aligned_cols=244  Identities=36%  Similarity=0.539  Sum_probs=199.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh--hHHHHHHhhcCC-CceEEEeccCCC-HHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA--GIALADSLLSSS-PLVTYLHCDVSL-EQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~D~s~-~~~i~~~~~~i   86 (285)
                      +.+++|+++||||++|||+++|++|+++|+.|+++.++.+.  .+...+...... ..+.+..+|+++ .++++.+++.+
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999988887664  333333332111 368888999998 99999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC-C
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG-P  165 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~-~  165 (285)
                      .+.+|++|++|||||.....   .++.+.+.++|++.+++|+.+++.+.+.+.|.++++   +||++||..+. +.++ .
T Consensus        81 ~~~~g~id~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~  153 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPD---APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQ  153 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCc
Confidence            99999999999999986431   367888999999999999999999999888888733   99999999998 7777 4


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|++.++.|+.++||++++|+||.+.|++........             ...........  +.++..
T Consensus       154 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-------------~~~~~~~~~~~--~~~~~~  218 (251)
T COG1028         154 AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-------------LEALKRLAARI--PLGRLG  218 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-------------hhHHHHHHhcC--CCCCCc
Confidence            999999999999999999999999999999999999999987543320             00011111111  444778


Q ss_pred             CHHHHHHHHHHHhcCC-CCcccccEEEecCCc
Q 040531          246 KARDIAEAALYLASDE-SKYISGHNLVVDGGF  276 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~  276 (285)
                      .|++++..+.|+.+.. ..+++|+.+.+|||.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         219 TPEEVAAAVAFLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             CHHHHHHHHHHHcCcchhccccCCEEEeCCCC
Confidence            8999999999998774 778999999999986

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-34  Score=227.31  Aligned_cols=188  Identities=21%  Similarity=0.246  Sum_probs=171.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |.+.|.++|||||++|||+++|++|.+.|-+|++++|+.+++.+..+..    +.+....||+.|.++++++++++.++|
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            4678999999999999999999999999999999999999998877654    668889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +.+++||||||+.....-.  -.+...++.++-+.+|+.+|..+.+.++|+++++..+.||+|||.-+..|....+.|++
T Consensus        77 P~lNvliNNAGIqr~~dlt--~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYca  154 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLT--GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCA  154 (245)
T ss_pred             Cchheeeecccccchhhcc--CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchh
Confidence            9999999999997542111  13445677888999999999999999999999999999999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      +|||++.++.+|+.+++..+|.|.-+.|..|+|+
T Consensus       155 TKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         155 TKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999997

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=2.8e-33  Score=236.60  Aligned_cols=237  Identities=32%  Similarity=0.478  Sum_probs=200.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      +||||++++||+.++++|+++|++|++++|+. +..+...+.+.+.+.++.++++|++|.++++++++++.+.++++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 44455555565556678999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV  176 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~  176 (285)
                      ||++|....    .++.+.+.+++++.+++|+.+++.+.+.+.+.+.+++.++++++||..+..+.++...|+++|++++
T Consensus        81 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~  156 (239)
T TIGR01830        81 VNNAGITRD----NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVI  156 (239)
T ss_pred             EECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHH
Confidence            999997543    4566778899999999999999999999999987767789999999988888888999999999999


Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHH
Q 040531          177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALY  256 (285)
Q Consensus       177 ~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~  256 (285)
                      .+++.++.++.+.|+++++++||+++|++......                ........  ..+.++..+++|+++.+++
T Consensus       157 ~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~a~~~~~  218 (239)
T TIGR01830       157 GFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSE----------------KVKKKILS--QIPLGRFGTPEEVANAVAF  218 (239)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcCh----------------HHHHHHHh--cCCcCCCcCHHHHHHHHHH
Confidence            99999999998889999999999999987542110                11111111  1245667899999999999


Q ss_pred             HhcCCCCcccccEEEecCCc
Q 040531          257 LASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       257 l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ++++...+++|+.+++|+|+
T Consensus       219 ~~~~~~~~~~g~~~~~~~g~  238 (239)
T TIGR01830       219 LASDEASYITGQVIHVDGGM  238 (239)
T ss_pred             HhCcccCCcCCCEEEeCCCc
Confidence            99888889999999999996

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=239.92  Aligned_cols=219  Identities=32%  Similarity=0.393  Sum_probs=187.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-cCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-HGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~~~id   94 (285)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.  +.++.++++|+++.+++.++++.+.+. ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999988777766553  457899999999999999999988776 78999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +||||||....    .++.+.+.+++++.+++|+.+++.+++++.+.|+.++.++||++||..+..+.++...|++||++
T Consensus        80 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  155 (260)
T PRK08267         80 VLFNNAGILRG----GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFA  155 (260)
T ss_pred             EEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHH
Confidence            99999998644    56777899999999999999999999999999988778999999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +++++++++.|+.+++|++++|+||++.|++......                +.......    ..+...+|+++++.+
T Consensus       156 ~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~----------------~~~~~~~~----~~~~~~~~~~va~~~  215 (260)
T PRK08267        156 VRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN----------------EVDAGSTK----RLGVRLTPEDVAEAV  215 (260)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc----------------hhhhhhHh----hccCCCCHHHHHHHH
Confidence            9999999999999999999999999999988653100                00001111    112246899999999


Q ss_pred             HHHhcC
Q 040531          255 LYLASD  260 (285)
Q Consensus       255 ~~l~s~  260 (285)
                      +.++..
T Consensus       216 ~~~~~~  221 (260)
T PRK08267        216 WAAVQH  221 (260)
T ss_pred             HHHHhC
Confidence            999854

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-33  Score=235.94  Aligned_cols=214  Identities=21%  Similarity=0.222  Sum_probs=186.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.+.  +.++.++++|+++.+++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999998888777766543  457899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC-Cccchhh
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG-PHAYTVS  171 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~-~~~Y~as  171 (285)
                      +|++|||||+...    .++.+.+.+.+++.+++|+.+++.+++.+++.|++.+.++||++||..+..+.+. ...|++|
T Consensus        82 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  157 (248)
T PRK08251         82 LDRVIVNAGIGKG----ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAAS  157 (248)
T ss_pred             CCEEEECCCcCCC----CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHH
Confidence            9999999998643    4566778899999999999999999999999998877889999999988877775 6889999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |++++.+++.++.|+...+|++++++||+++|++.+....                             ....+++++.+
T Consensus       158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-----------------------------~~~~~~~~~~a  208 (248)
T PRK08251        158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-----------------------------TPFMVDTETGV  208 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-----------------------------CCccCCHHHHH
Confidence            9999999999999999889999999999999998653211                             11245788888


Q ss_pred             HHHHHHhcCC
Q 040531          252 EAALYLASDE  261 (285)
Q Consensus       252 ~~~~~l~s~~  261 (285)
                      +.++..+...
T Consensus       209 ~~i~~~~~~~  218 (248)
T PRK08251        209 KALVKAIEKE  218 (248)
T ss_pred             HHHHHHHhcC
Confidence            8888877554

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-33  Score=239.09  Aligned_cols=232  Identities=22%  Similarity=0.252  Sum_probs=185.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...+      ..+.++.+|+++.++++++++.+.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA------AGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999999999998876554432      23678899999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      +|||||....    .++.+.+.+++++.+++|+.+++.++++++|.|++ ..++||++||..+..+.+....|+++|+++
T Consensus        76 vi~~ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  150 (274)
T PRK05693         76 LINNAGYGAM----GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAV  150 (274)
T ss_pred             EEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHH
Confidence            9999997543    56777899999999999999999999999999864 458999999999988888889999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      +.++++++.|++++||+|++++||+|+|++................+.....+.+.....   .......+|+++|+.++
T Consensus       151 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~i~  227 (274)
T PRK05693        151 HALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARAR---ASQDNPTPAAEFARQLL  227 (274)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHH---hccCCCCCHHHHHHHHH
Confidence            999999999999999999999999999998764322111111111222222222222211   11133458999999999


Q ss_pred             HHhcCC
Q 040531          256 YLASDE  261 (285)
Q Consensus       256 ~l~s~~  261 (285)
                      ..+...
T Consensus       228 ~~~~~~  233 (274)
T PRK05693        228 AAVQQS  233 (274)
T ss_pred             HHHhCC
Confidence            887643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.6e-33  Score=234.08  Aligned_cols=236  Identities=21%  Similarity=0.315  Sum_probs=195.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|+++||||+++||.++++.|+++|++|++++|+++..+...+.+.. ..++.++++|+++.+++.++++++...+
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999998887766555543 2468889999999999999999998888


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-CCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-GGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~~~~~~~Y~  169 (285)
                      +++|.+|+++|....    .++.  +.++++..+++|+.+++.+++.++|.+.+  .+++|++||..+.. +.+....|+
T Consensus        80 ~~id~ii~~ag~~~~----~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~  151 (238)
T PRK05786         80 NAIDGLVVTVGGYVE----DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYA  151 (238)
T ss_pred             CCCCEEEEcCCCcCC----CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHH
Confidence            999999999986532    2222  34889999999999999999999999853  58899999987643 556678899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.+++.++.++.+.+|++++|+||+++|++....                   .+..    .........++++
T Consensus       152 ~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-------------------~~~~----~~~~~~~~~~~~~  208 (238)
T PRK05786        152 VAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-------------------NWKK----LRKLGDDMAPPED  208 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-------------------hhhh----hccccCCCCCHHH
Confidence            9999999999999999998999999999999999863210                   0001    0111234579999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++.+.+++++.+.+++|+.+.+|||..+
T Consensus       209 va~~~~~~~~~~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        209 FAKVIIWLLTDEADWVDGVVIPVDGGARL  237 (238)
T ss_pred             HHHHHHHHhcccccCccCCEEEECCcccc
Confidence            99999999999888999999999999754

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=237.58  Aligned_cols=245  Identities=16%  Similarity=0.204  Sum_probs=193.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+..   ..++.++++|++|.+++.++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987766655443   34688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +||||||....    .+..+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.|+.+.|+++|++
T Consensus        79 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (276)
T PRK06482         79 VVVSNAGYGLF----GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWG  154 (276)
T ss_pred             EEEECCCCCCC----cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHH
Confidence            99999998644    45677788999999999999999999999999987778999999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.++++++.++.++||+++.++||.+.|++..............    ......+......  .+..-..+|+++++++
T Consensus       155 ~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~d~~~~~~a~  228 (276)
T PRK06482        155 IEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYD----DTPVGDLRRALAD--GSFAIPGDPQKMVQAM  228 (276)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCcccc----chhhHHHHHHHhh--ccCCCCCCHHHHHHHH
Confidence            999999999999999999999999999998854321110000000    0001111111111  1112236899999999


Q ss_pred             HHHhcCCCCcccccEEEecCC
Q 040531          255 LYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +..+....   .+..+++.+|
T Consensus       229 ~~~~~~~~---~~~~~~~g~~  246 (276)
T PRK06482        229 IASADQTP---APRRLTLGSD  246 (276)
T ss_pred             HHHHcCCC---CCeEEecChH
Confidence            99885432   3455666655

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.4e-32  Score=242.99  Aligned_cols=243  Identities=17%  Similarity=0.100  Sum_probs=188.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.....++.++++|+++.++++++++++.+.
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999999999999998888887777544557889999999999999999998877


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC--ceEEEEccccccc-------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS--GCIISTASVASLM-------  160 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~ii~vss~~~~~-------  160 (285)
                      ++++|+||||||+....   .+..+.+.++|+..+++|+.+++.+++.++|.|++++.  ++||++||.....       
T Consensus        81 ~~~iD~li~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~  157 (322)
T PRK07453         81 GKPLDALVCNAAVYMPL---LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKI  157 (322)
T ss_pred             CCCccEEEECCcccCCC---CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCcc
Confidence            78899999999975321   22345688999999999999999999999999987653  6999999965421       


Q ss_pred             ----------------------------CCCCCccchhhHHHHHHHHHHHHHHhC-CCCcEEEEEeCCCc-cchhhhhhh
Q 040531          161 ----------------------------GGLGPHAYTVSKHAIVGLTKNTACELG-KYGIRVNCISPFGV-ATSMLVNAW  210 (285)
Q Consensus       161 ----------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~-~~~i~v~~v~pg~v-~t~~~~~~~  210 (285)
                                                  +..+...|+.||.|...+++.+++++. .+||++++++||.| .|++.+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~  237 (322)
T PRK07453        158 PIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTP  237 (322)
T ss_pred             CCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCC
Confidence                                        011245799999999999999999995 46899999999999 588754321


Q ss_pred             cccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEE
Q 040531          211 KSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLV  271 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~  271 (285)
                      .              ....+...+..  .......++++.++.+++++.+.....+|..+.
T Consensus       238 ~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        238 P--------------LFQKLFPWFQK--NITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             H--------------HHHHHHHHHHH--HHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            1              00011111111  111224578888888888886654446787775

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=4.6e-33  Score=223.14  Aligned_cols=225  Identities=25%  Similarity=0.264  Sum_probs=184.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEe-cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH--
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH-GAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK--   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~--   89 (285)
                      .-|.++||||++|||..++++|.+. |.++++.. |+.+...+..+......++++.++.|+++.++++.+++++.+-  
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3466999999999999999999965 56665554 5466643333333345789999999999999999999999887  


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-----------ceEEEEccccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-----------GCIISTASVAS  158 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----------g~ii~vss~~~  158 (285)
                      ...+|+||+|||+..+.   ....+.+.+.|.+.+++|+.|+..+.|+++|++++...           +.||++||.++
T Consensus        82 ~~GlnlLinNaGi~~~y---~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSY---NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             cCCceEEEeccceeeec---ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence            45799999999997543   56667788999999999999999999999999986532           38999999776


Q ss_pred             ccCC---CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh
Q 040531          159 LMGG---LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR  235 (285)
Q Consensus       159 ~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                      ..+.   .+..+|..||+|+++++|+++.||++.+|-|..+|||+|.|+|...                           
T Consensus       159 s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~---------------------------  211 (249)
T KOG1611|consen  159 SIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK---------------------------  211 (249)
T ss_pred             ccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC---------------------------
Confidence            6432   3467999999999999999999999999999999999999999652                           


Q ss_pred             hhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       236 ~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                            ...++|||.+..++.-........+|..++-|+
T Consensus       212 ------~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  212 ------KAALTVEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             ------CcccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence                  124588888888888777777777888888776

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-33  Score=228.46  Aligned_cols=198  Identities=20%  Similarity=0.225  Sum_probs=169.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++++||||++|||++++++|+++ ++|++++|+..                 .++||+++.+++++++++    .+++|+
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~   58 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDA   58 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence            37999999999999999999999 99999998753                 368999999999888764    478999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      +|||||....    .++.+.+.++|++.+++|+.+++.+.+.+.|.|.+  .++|+++||..+..+.++...|+++|+|+
T Consensus        59 lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  132 (199)
T PRK07578         59 VVSAAGKVHF----APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGAL  132 (199)
T ss_pred             EEECCCCCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHH
Confidence            9999997533    56778899999999999999999999999999954  48999999999888888999999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      ++|+++++.|+ ++||+||+|+||+++|++....                      ..     .+.....+|+|+|+.++
T Consensus       133 ~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~----------------------~~-----~~~~~~~~~~~~a~~~~  184 (199)
T PRK07578        133 EGFVKAAALEL-PRGIRINVVSPTVLTESLEKYG----------------------PF-----FPGFEPVPAARVALAYV  184 (199)
T ss_pred             HHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhh----------------------hc-----CCCCCCCCHHHHHHHHH
Confidence            99999999999 8899999999999999874211                      00     01233569999999999


Q ss_pred             HHhcCCCCcccccEEEe
Q 040531          256 YLASDESKYISGHNLVV  272 (285)
Q Consensus       256 ~l~s~~~~~~~G~~i~v  272 (285)
                      ++++.   ..+|+.+.+
T Consensus       185 ~~~~~---~~~g~~~~~  198 (199)
T PRK07578        185 RSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHhcc---ceeeEEecc
Confidence            99864   589998875

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=230.72  Aligned_cols=228  Identities=30%  Similarity=0.397  Sum_probs=194.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+.+.+++++||||+|+||++++++|+++|++|++++|+.+.+++..+.+.+. .++.++++|+++.+++..+++++.+.
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999988887777776543 67889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+|||++|....    .++.+.+.+++++.+++|+.+++.+++++++.+ +++.+++|++||..+..+.++...|+
T Consensus        80 ~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~  154 (237)
T PRK07326         80 FGGLDVLIANAGVGHF----APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYN  154 (237)
T ss_pred             cCCCCEEEECCCCCCC----CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHH
Confidence            9999999999987543    466778999999999999999999999999998 44568999999998877777888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++++++.++.|+.+.|+++++++||++.|++.......               +            ....++++|
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~---------------~------------~~~~~~~~d  207 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSE---------------K------------DAWKIQPED  207 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccch---------------h------------hhccCCHHH
Confidence            9999999999999999999999999999999999865321000               0            011368999


Q ss_pred             HHHHHHHHhcCCCCcccccEE
Q 040531          250 IAEAALYLASDESKYISGHNL  270 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i  270 (285)
                      +++.++++++.....+.++.-
T Consensus       208 ~a~~~~~~l~~~~~~~~~~~~  228 (237)
T PRK07326        208 IAQLVLDLLKMPPRTLPSKIE  228 (237)
T ss_pred             HHHHHHHHHhCCccccccceE
Confidence            999999999887665555443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.6e-33  Score=241.14  Aligned_cols=233  Identities=25%  Similarity=0.270  Sum_probs=190.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..++++++++||||++|||+++|++|+.+|++|++.+|+.+..++..+++.+.  ..++.++++|+++.++|.++++++.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999763  3568889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------  161 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------  161 (285)
                      +.++++|++|||||++..      ....+.|.++..|.+|+.|+|.+++.++|.|+...++|||++||......      
T Consensus       110 ~~~~~ldvLInNAGV~~~------~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAP------PFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             hcCCCccEEEeCcccccC------CcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence            999999999999999854      22567889999999999999999999999998877799999999765110      


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch-hhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          162 -------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS-MLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       162 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                             ......|+.||.|...+++.|++.+.+ ||.+++++||.|.|+ +.+..+                  .....
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~------------------~~~~l  244 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNL------------------LLRLL  244 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchH------------------HHHHH
Confidence                   112235999999999999999999988 999999999999999 444110                  11111


Q ss_pred             HhhhhcccCCCCCHHHHHHHHHHHh-cCCCCcccccE
Q 040531          234 VRGLANLKGVTLKARDIAEAALYLA-SDESKYISGHN  269 (285)
Q Consensus       234 ~~~~~~~~~~~~~~eeva~~~~~l~-s~~~~~~~G~~  269 (285)
                      ...+..+..  -++++-|+..++++ +++-..++|..
T Consensus       245 ~~~l~~~~~--ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  245 AKKLSWPLT--KSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             HHHHHHHhc--cCHHHHhhheehhccCccccCccccc
Confidence            222212222  27899999999988 44445556655

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=230.97  Aligned_cols=212  Identities=22%  Similarity=0.219  Sum_probs=183.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+++||||++|||++++++|+++|++|++++|+.+..+...+.+... +.++.++++|+++.++++++++++.+   .+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999998877776666443 45789999999999999999887754   479


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ++|||+|....    .++.+.+.+++.+.+++|+.+++.+++++.|.|.+++.++++++||..+..+.++...|+++|++
T Consensus        79 ~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (243)
T PRK07102         79 IVLIAVGTLGD----QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAA  154 (243)
T ss_pred             EEEECCcCCCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHH
Confidence            99999997644    45667889999999999999999999999999987778999999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +++++++++.|+.+.||++++|+||+++|++.....                            .+.....+|+++++.+
T Consensus       155 ~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~----------------------------~~~~~~~~~~~~a~~i  206 (243)
T PRK07102        155 LTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK----------------------------LPGPLTAQPEEVAKDI  206 (243)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC----------------------------CCccccCCHHHHHHHH
Confidence            999999999999999999999999999998754310                            1122346899999999


Q ss_pred             HHHhcCCC
Q 040531          255 LYLASDES  262 (285)
Q Consensus       255 ~~l~s~~~  262 (285)
                      +.++++..
T Consensus       207 ~~~~~~~~  214 (243)
T PRK07102        207 FRAIEKGK  214 (243)
T ss_pred             HHHHhCCC
Confidence            99987654

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=233.49  Aligned_cols=225  Identities=28%  Similarity=0.374  Sum_probs=190.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++++|||||+++||++++++|+++|++|++++|+....+...+.+...+.++.++.+|+++.+++..+++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998887777777766566789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCC-CHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDF-DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      ++|||+|....    .++.+. +.+++++.+++|+.+++.+++.+.+.|.++ .+++|++||..+..+.++...|+++|+
T Consensus        81 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  155 (263)
T PRK06181         81 ILVNNAGITMW----SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKH  155 (263)
T ss_pred             EEEECCCcccc----cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHH
Confidence            99999997643    456666 889999999999999999999999998644 589999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++++++.++.++.+++|+++++.||.+.|++.........             ...    ........++++|+|+|+.
T Consensus       156 ~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~-------------~~~----~~~~~~~~~~~~~~dva~~  218 (263)
T PRK06181        156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDG-------------KPL----GKSPMQESKIMSAEECAEA  218 (263)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccc-------------ccc----ccccccccCCCCHHHHHHH
Confidence            99999999999999999999999999999998764322100             000    0000111356899999999


Q ss_pred             HHHHhcCC
Q 040531          254 ALYLASDE  261 (285)
Q Consensus       254 ~~~l~s~~  261 (285)
                      ++++++..
T Consensus       219 i~~~~~~~  226 (263)
T PRK06181        219 ILPAIARR  226 (263)
T ss_pred             HHHHhhCC
Confidence            99999754

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=263.92  Aligned_cols=193  Identities=24%  Similarity=0.316  Sum_probs=175.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+...+.++.++++|++|.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            36889999999999999999999999999999999999998888888776666789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCC--CHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDF--DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +++|++|||||....    ..+.+.  +.++++..+++|+.+++.+++.++|.|++++.++||++||.++..+.++.+.|
T Consensus       447 g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  522 (657)
T PRK07201        447 GHVDYLVNNAGRSIR----RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAY  522 (657)
T ss_pred             CCCCEEEECCCCCCC----CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchH
Confidence            999999999997533    222222  36889999999999999999999999988888999999999988888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      +++|+|+++++++++.|++++||+|++|+||+|+|++..
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~  561 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA  561 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence            999999999999999999999999999999999999864

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-32  Score=230.62  Aligned_cols=228  Identities=21%  Similarity=0.207  Sum_probs=181.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH-HHHHc---C
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV-TISKH---G   91 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~-i~~~~---~   91 (285)
                      +++|||||++|||++++++|+++|++|++++|+.+..  .   ....+.++.++++|+++.+++++++++ +.+.+   +
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            3799999999999999999999999999999986542  1   112245788999999999999998776 55544   4


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|++|||||.....   .++.+.+.++|++.+++|+.+++.+.+.+.+.|.+++.++||++||..+..+.++...|+++
T Consensus        77 ~~~~~v~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  153 (243)
T PRK07023         77 SRVLLINNAGTVEPI---GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCAT  153 (243)
T ss_pred             CceEEEEcCcccCCC---CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHH
Confidence            799999999976432   45667899999999999999999999999999987778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |++++++++.++.+ .+.+|++++|+||+++|++.........         ... ........  ..+.++..+|+|+|
T Consensus       154 K~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~---------~~~-~~~~~~~~--~~~~~~~~~~~~va  220 (243)
T PRK07023        154 KAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDE---------ERF-PMRERFRE--LKASGALSTPEDAA  220 (243)
T ss_pred             HHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhccc---------ccc-hHHHHHHH--hhhcCCCCCHHHHH
Confidence            99999999999999 7789999999999999998653211100         000 01111111  23457788999999


Q ss_pred             H-HHHHHhcCCCCc
Q 040531          252 E-AALYLASDESKY  264 (285)
Q Consensus       252 ~-~~~~l~s~~~~~  264 (285)
                      + .+.+|+++....
T Consensus       221 ~~~~~~l~~~~~~~  234 (243)
T PRK07023        221 RRLIAYLLSDDFGS  234 (243)
T ss_pred             HHHHHHHhccccCC
Confidence            9 567787775433

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-33  Score=222.96  Aligned_cols=186  Identities=24%  Similarity=0.279  Sum_probs=170.7

Q ss_pred             CCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH-HcC
Q 040531           14 EGKIAIVTGGA-RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS-KHG   91 (285)
Q Consensus        14 ~~k~vlItGas-~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~-~~~   91 (285)
                      ..|.+||||++ ||||.+++++|++.|+.|+.+.|+.+...++..+.     .+..+..|+++++++..+..++++ .+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            46788898876 89999999999999999999999999888777544     488999999999999999999988 689


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+|+||||....    .|..+.+.++.++.|++|++|.+.+.+++.. +.-+.+|+||+++|..+..|+|..+.|++|
T Consensus        81 kld~L~NNAG~~C~----~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h-~likaKGtIVnvgSl~~~vpfpf~~iYsAs  155 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCT----FPALDATIAAVEQCFKVNVFGHIRMCRALSH-FLIKAKGTIVNVGSLAGVVPFPFGSIYSAS  155 (289)
T ss_pred             ceEEEEcCCCCCcc----cccccCCHHHHHhhhccceeeeehHHHHHHH-HHHHccceEEEecceeEEeccchhhhhhHH
Confidence            99999999998766    6888999999999999999999999999985 445678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~  209 (285)
                      |||++.+++.|..|++++||+|..+.||.|.|.+..+.
T Consensus       156 KAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  156 KAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHHHHHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            99999999999999999999999999999999988763

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.3e-31  Score=225.37  Aligned_cols=192  Identities=21%  Similarity=0.284  Sum_probs=174.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..++.+|.|+|||+-+|.|+.+|++|.++|..|++.+.+++..+.+..+..  .++...++.|++++++++++.+.+.+.
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            346789999999999999999999999999999999988888777766554  678888999999999999999988876


Q ss_pred             cC--CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           90 HG--RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        90 ~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .+  .+-.||||||+....   ++.+-.+.++|++.+++|+.|++.++++++|++++ ..||||++||..+..+.|...+
T Consensus       102 l~~~gLwglVNNAGi~~~~---g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~-arGRvVnvsS~~GR~~~p~~g~  177 (322)
T KOG1610|consen  102 LGEDGLWGLVNNAGISGFL---GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR-ARGRVVNVSSVLGRVALPALGP  177 (322)
T ss_pred             cccccceeEEecccccccc---CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh-ccCeEEEecccccCccCccccc
Confidence            43  599999999987543   67777899999999999999999999999999964 5799999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      |++||+|++.|+.++++|+.++||+|..|.||...|++..
T Consensus       178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             chhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999999986

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=230.92  Aligned_cols=204  Identities=31%  Similarity=0.414  Sum_probs=166.6

Q ss_pred             HHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCC
Q 040531           31 TVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK  110 (285)
Q Consensus        31 ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~  110 (285)
                      +|++|+++|++|++++|+.+...     +      ..++++|++|.++++++++++.   +++|+||||||....     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-----
Confidence            47899999999999999876532     1      2457899999999999988764   689999999997421     


Q ss_pred             CCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---------------------------CCC
Q 040531          111 SITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---------------------------GGL  163 (285)
Q Consensus       111 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---------------------------~~~  163 (285)
                             +.++..+++|+.+++.+++.++|.|.+  .|+||++||..+..                           +.+
T Consensus        62 -------~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (241)
T PRK12428         62 -------APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA  132 (241)
T ss_pred             -------CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCC
Confidence                   247899999999999999999999853  48999999988762                           456


Q ss_pred             CCccchhhHHHHHHHHHHHH-HHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          164 GPHAYTVSKHAIVGLTKNTA-CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la-~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      +...|++||+|++++++.++ .|++++||+||+|+||++.|++.......            ...+...+    ...+.+
T Consensus       133 ~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~------------~~~~~~~~----~~~~~~  196 (241)
T PRK12428        133 LATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM------------LGQERVDS----DAKRMG  196 (241)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhh------------hhhHhhhh----cccccC
Confidence            67899999999999999999 99999999999999999999986542110            00011111    124567


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +..+|||+|++++||+++.+.+++|+.+.+|||+..
T Consensus       197 ~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        197 RPATADEQAAVLVFLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             CCCCHHHHHHHHHHHcChhhcCccCcEEEecCchHH
Confidence            788999999999999999999999999999999764

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-31  Score=224.29  Aligned_cols=179  Identities=21%  Similarity=0.199  Sum_probs=156.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++++||||++|||++++++|+++|++|++++|+.+.+++..+.    ..++.+++||+++.++++++++++..   .+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            7899999999999999999999999999999988776555432    34688899999999999999887642   4799


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      +|||||....    .+..+.+.++|++.+++|+.+++.++++++|.|.  +.+++|++||..+..+.++...|+++|+++
T Consensus        75 ~i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~Y~asK~a~  148 (240)
T PRK06101         75 WIFNAGDCEY----MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS--CGHRVVIVGSIASELALPRAEAYGASKAAV  148 (240)
T ss_pred             EEEcCccccc----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCeEEEEechhhccCCCCCchhhHHHHHH
Confidence            9999986432    2334578899999999999999999999999984  347899999998888888899999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      +++++.++.|+.++||+++++.||.++|++..
T Consensus       149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             HHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence            99999999999999999999999999999854

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.2e-31  Score=214.59  Aligned_cols=163  Identities=34%  Similarity=0.569  Sum_probs=152.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC--chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-KVVIADID--DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~--~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..+++.+++...+.++.++++|+++.++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999965 68888888  77788888888877788999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|++|||+|....    .++.+.+.++|++.|++|+.+++.+.++++|    ++.++||++||..+..+.|+...|+++|
T Consensus        81 ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~ask  152 (167)
T PF00106_consen   81 LDILINNAGIFSD----GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASK  152 (167)
T ss_dssp             ESEEEEECSCTTS----BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHH
T ss_pred             ccccccccccccc----cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHH
Confidence            9999999999764    7888889999999999999999999999999    4589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 040531          173 HAIVGLTKNTACEL  186 (285)
Q Consensus       173 aa~~~l~~~la~e~  186 (285)
                      +|+++|+++++.|+
T Consensus       153 aal~~~~~~la~e~  166 (167)
T PF00106_consen  153 AALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=2e-30  Score=219.31  Aligned_cols=184  Identities=28%  Similarity=0.341  Sum_probs=163.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ||.+++++++||||+|+||++++++|+++|+ .|++++|+.+.+.+       .+.++.++.+|+++.+++.++++.   
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh---
Confidence            4678999999999999999999999999999 99999998776543       245788999999999998887654   


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                       ++++|++||++|....   ..++.+.+.+++.+.+++|+.+++.+.+++.+.+++++.+++|++||..+..+.++...|
T Consensus        71 -~~~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y  146 (238)
T PRK08264         71 -ASDVTILVNNAGIFRT---GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTY  146 (238)
T ss_pred             -cCCCCEEEECCCcCCC---CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHh
Confidence             4689999999998422   156778899999999999999999999999999987778999999999888888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      +++|++++.+++.++.++.++++++++++||.++|++..
T Consensus       147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~  185 (238)
T PRK08264        147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA  185 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc
Confidence            999999999999999999999999999999999998854

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=216.32  Aligned_cols=182  Identities=24%  Similarity=0.273  Sum_probs=155.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+     ..++.++.+|++|.++++++++.+.+  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-----LPGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-----ccccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            689999999999999999999999999999999876544322     23577889999999999999988754  47999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC---CCCccchhhH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG---LGPHAYTVSK  172 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~---~~~~~Y~asK  172 (285)
                      ||||||+....  ..++.+.+.+++++.+++|+.+++.+.+++++.+++ ..+.+++++|..+..+.   .+...|+++|
T Consensus        75 vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK  151 (225)
T PRK08177         75 LFVNAGISGPA--HQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASK  151 (225)
T ss_pred             EEEcCcccCCC--CCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHH
Confidence            99999986431  245677889999999999999999999999999864 35789999987665433   3567899999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      ++++.+++.++.|+++++|++|+|+||+++|++..
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            99999999999999999999999999999999854

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=3.1e-31  Score=223.07  Aligned_cols=193  Identities=26%  Similarity=0.304  Sum_probs=172.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      -|++++||||+-|||++.|++||++|.+|++++|+.++++.+.+++.+.. .++.++.+|+++.+.+.+-+.+..+. .+
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~  126 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LD  126 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cc
Confidence            35999999999999999999999999999999999999999999997654 57899999999988743333322222 36


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      |-+||||+|.....  +..+.+.+.+.+++.+.+|+.+...+.+.++|.|.++++|.|++++|.++..+.|.++.|+++|
T Consensus       127 VgILVNNvG~~~~~--P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  127 VGILVNNVGMSYDY--PESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             eEEEEecccccCCC--cHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence            89999999997643  4778888888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~  209 (285)
                      +.++.|+++|+.|+..+||.|.++.|..|.|+|....
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            9999999999999999999999999999999997643

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=216.66  Aligned_cols=184  Identities=23%  Similarity=0.285  Sum_probs=163.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+...+..+.....+.++.++++|++|.+++..+++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5789999999999999999999999999999999887776666555556678999999999998877643      3799


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +||||||....    .++.+.+.++++..+++|+.+++.+.+.+++.+++++.++||++||..+..+.++...|+++|++
T Consensus        76 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a  151 (257)
T PRK09291         76 VLLNNAGIGEA----GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHA  151 (257)
T ss_pred             EEEECCCcCCC----cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHH
Confidence            99999998643    57778899999999999999999999999999987777999999999888888888899999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhh
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVN  208 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~  208 (285)
                      ++.+++.++.++.+.||++++|+||++.|++...
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~  185 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT  185 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchhh
Confidence            9999999999999999999999999999987643

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-29  Score=212.39  Aligned_cols=200  Identities=19%  Similarity=0.138  Sum_probs=152.5

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +....+++|+++||||++|||++++++|+++|++|++++|+.......   .. .. ...++.+|+++.+++.+      
T Consensus         7 ~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~-~~-~~~~~~~D~~~~~~~~~------   75 (245)
T PRK12367          7 MAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---ND-ES-PNEWIKWECGKEESLDK------   75 (245)
T ss_pred             hhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hc-cC-CCeEEEeeCCCHHHHHH------
Confidence            334568999999999999999999999999999999999986322111   11 11 23578999999987654      


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC---CCceEEEEcccccccCCCC
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR---RSGCIISTASVASLMGGLG  164 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~ii~vss~~~~~~~~~  164 (285)
                       .++++|++|||||...       ..+.+.++|++.+++|+.+++.++++++|.|+++   +++.+++.+|.++..+ +.
T Consensus        76 -~~~~iDilVnnAG~~~-------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~  146 (245)
T PRK12367         76 -QLASLDVLILNHGINP-------GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-AL  146 (245)
T ss_pred             -hcCCCCEEEECCccCC-------cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CC
Confidence             3568999999999742       2346889999999999999999999999999753   2334545556555443 45


Q ss_pred             CccchhhHHHHHHHH---HHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          165 PHAYTVSKHAIVGLT---KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~---~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .+.|++||+|+..+.   +.++.|+.+.+++|+++.||+++|++..                                  
T Consensus       147 ~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~----------------------------------  192 (245)
T PRK12367        147 SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP----------------------------------  192 (245)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc----------------------------------
Confidence            678999999986544   4555566788999999999999987621                                  


Q ss_pred             CCCCCHHHHHHHHHHHhcCC
Q 040531          242 GVTLKARDIAEAALYLASDE  261 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~  261 (285)
                      ....+|+++|+.+++.++..
T Consensus       193 ~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        193 IGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             cCCCCHHHHHHHHHHHHhcC
Confidence            01358999999999998654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.5e-29  Score=212.49  Aligned_cols=189  Identities=28%  Similarity=0.325  Sum_probs=176.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++++|||+++|||+++|.++..+|+.|.++.|+.+.+.+++.++.-  ...+|.+..+|++|-+++..+++++.+.++++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            7999999999999999999999999999999999999999988743  23448899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhhH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      |.+|||||..-+    +.+.+.+.++++..+++|+.+.++.+++.++.|+++. .|+|+.+||..+..+..++++|+++|
T Consensus       114 d~l~~cAG~~v~----g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK  189 (331)
T KOG1210|consen  114 DNLFCCAGVAVP----GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSK  189 (331)
T ss_pred             ceEEEecCcccc----cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHH
Confidence            999999998765    7899999999999999999999999999999998776 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhh
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVN  208 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~  208 (285)
                      +|+.+|+..+++|+.++||+|....|+.+.||....
T Consensus       190 ~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~  225 (331)
T KOG1210|consen  190 FALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER  225 (331)
T ss_pred             HHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc
Confidence            999999999999999999999999999999997653

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=6.1e-29  Score=212.43  Aligned_cols=223  Identities=22%  Similarity=0.241  Sum_probs=181.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc-CCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH-GRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~-~~id   94 (285)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.++...+      ..+..+++|+++.+++..+++.+.+.. +++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS------LGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh------CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            689999999999999999999999999999998877654322      136788999999999999998887653 6899


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      .+|||+|....    .++.+.+.+++++.+++|+.|++.+.+.+++.+.+.+.+++|++||..+..+.++...|+++|++
T Consensus        77 ~ii~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~  152 (256)
T PRK08017         77 GLFNNAGFGVY----GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYA  152 (256)
T ss_pred             EEEECCCCCCc----cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHH
Confidence            99999997533    56778899999999999999999999999999988778899999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.++++++.++.+++++++++.||.+.|++.........     ..+   ...  ...      .....++|+|+++.+
T Consensus       153 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-----~~~---~~~--~~~------~~~~~~~~~d~a~~~  216 (256)
T PRK08017        153 LEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQS-----DKP---VEN--PGI------AARFTLGPEAVVPKL  216 (256)
T ss_pred             HHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhh-----ccc---hhh--hHH------HhhcCCCHHHHHHHH
Confidence            9999999999999999999999999999987654321100     000   000  000      011246899999999


Q ss_pred             HHHhcCCCCc
Q 040531          255 LYLASDESKY  264 (285)
Q Consensus       255 ~~l~s~~~~~  264 (285)
                      ..++++....
T Consensus       217 ~~~~~~~~~~  226 (256)
T PRK08017        217 RHALESPKPK  226 (256)
T ss_pred             HHHHhCCCCC
Confidence            9999776544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.9e-30  Score=207.09  Aligned_cols=242  Identities=21%  Similarity=0.246  Sum_probs=191.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh-hcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL-LSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .++++|+||+|+|||..++..+..++-......+++...+  .+.+ .+.+........|+++..-+.++++..+++++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            4778899999999999999988888766555555444433  2222 122334455667888888888999988999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhh
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      .|++|||||...+... ...+..+.++|++.++.|+++++.+.+.++|.++++. .+.++++||.++..|+++++.|+.+
T Consensus        83 r~iiI~NAG~lgdvsk-~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~  161 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSK-GAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS  161 (253)
T ss_pred             eeEEEecCCCccchhh-ccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence            9999999999876422 2234678899999999999999999999999998774 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|.++|++.||.|-. +++++.++.||.|+|+|.......-       .+.........+.+.     .+++.+|...+
T Consensus       162 KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~-------~~~p~~l~~f~el~~-----~~~ll~~~~~a  228 (253)
T KOG1204|consen  162 KAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETS-------RMTPADLKMFKELKE-----SGQLLDPQVTA  228 (253)
T ss_pred             HHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhcc-------CCCHHHHHHHHHHHh-----cCCcCChhhHH
Confidence            9999999999999955 7999999999999999988665431       122333444444433     46788999999


Q ss_pred             HHHHHHhcCCCCcccccEEEe
Q 040531          252 EAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      +.+..|+.... +++|+.+.-
T Consensus       229 ~~l~~L~e~~~-f~sG~~vdy  248 (253)
T KOG1204|consen  229 KVLAKLLEKGD-FVSGQHVDY  248 (253)
T ss_pred             HHHHHHHHhcC-ccccccccc
Confidence            99999996654 899998653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-28  Score=205.27  Aligned_cols=215  Identities=21%  Similarity=0.224  Sum_probs=175.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++..      ..+.++++|+++.++++++++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA------LGAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh------ccceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            589999999999999999999999999999998776554332      1356789999999999998776642  47999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC---ccchhhH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP---HAYTVSK  172 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~---~~Y~asK  172 (285)
                      +|||+|.....  ..++.+.+.++|+..+++|+.+++.++++++|.|.+ ..+++++++|..+..+....   ..|+++|
T Consensus        74 vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK  150 (222)
T PRK06953         74 AVYVAGVYGPR--TEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASK  150 (222)
T ss_pred             EEECCCcccCC--CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhH
Confidence            99999986321  134567789999999999999999999999998854 46899999998776553322   3599999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      ++++.+++.++.++.  ++++++|+||+++|++.+..                                 ...++++.+.
T Consensus       151 ~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~---------------------------------~~~~~~~~~~  195 (222)
T PRK06953        151 AALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQ---------------------------------AALDPAQSVA  195 (222)
T ss_pred             HHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCC---------------------------------CCCCHHHHHH
Confidence            999999999999864  69999999999999985321                                 1247788888


Q ss_pred             HHHHHhcCCCCcccccEEEecCCc
Q 040531          253 AALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      .++.++.......+|+.+..|++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~  219 (222)
T PRK06953        196 GMRRVIAQATRRDNGRFFQYDGVE  219 (222)
T ss_pred             HHHHHHHhcCcccCceEEeeCCcC
Confidence            888877666678899999998774

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.7e-27  Score=197.68  Aligned_cols=219  Identities=23%  Similarity=0.264  Sum_probs=177.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .|+++||||+++||++++++|+++ ++|++++|+.+..++..+..    ..+.++++|++|.++++++++.    .+++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~----~~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQ----LGRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHh----cCCCC
Confidence            478999999999999999999999 99999999877655544332    3478899999999998887764    35799


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +|||++|....    .++.+.+.++|.+.+++|+.+++.+.+.+++.++++ .+++|++||..+..+.++...|+.+|++
T Consensus        74 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a  148 (227)
T PRK08219         74 VLVHNAGVADL----GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFA  148 (227)
T ss_pred             EEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHH
Confidence            99999998543    456678899999999999999999999999988654 5799999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++.+++.++.++... ++++++.||.++|++.......                .      ....+..++++++|+++.+
T Consensus       149 ~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~----------------~------~~~~~~~~~~~~~dva~~~  205 (227)
T PRK08219        149 LRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQ----------------E------GGEYDPERYLRPETVAKAV  205 (227)
T ss_pred             HHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhh----------------h------ccccCCCCCCCHHHHHHHH
Confidence            999999999998766 9999999999998765432110                0      0011234568999999999


Q ss_pred             HHHhcCCCCcccccEEEec
Q 040531          255 LYLASDESKYISGHNLVVD  273 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vd  273 (285)
                      +++++...   .|++++++
T Consensus       206 ~~~l~~~~---~~~~~~~~  221 (227)
T PRK08219        206 RFAVDAPP---DAHITEVV  221 (227)
T ss_pred             HHHHcCCC---CCccceEE
Confidence            99997643   45555554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=3e-26  Score=205.92  Aligned_cols=197  Identities=21%  Similarity=0.173  Sum_probs=152.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+....+   ....++..+.+|++|.+++.+.       ++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~~~~v~~v~~Dvsd~~~v~~~-------l~  244 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GEDLPVKTLHWQVGQEAALAEL-------LE  244 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hcCCCeEEEEeeCCCHHHHHHH-------hC
Confidence            5789999999999999999999999999999999998776543322   2233567889999998887554       35


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC----ceEEEEcccccccCCCCCcc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS----GCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~ii~vss~~~~~~~~~~~~  167 (285)
                      ++|++|||||...       ..+.+.+++++.+++|+.|++.++++++|.|++++.    +.++++|+ +. ...+..+.
T Consensus       245 ~IDiLInnAGi~~-------~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~  315 (406)
T PRK07424        245 KVDILIINHGINV-------HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPL  315 (406)
T ss_pred             CCCEEEECCCcCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchH
Confidence            7999999999742       235788999999999999999999999999976542    34566554 33 33234567


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+.+++. +.++.  .++.+..+.||++.|++..                                 . ..++|
T Consensus       316 Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~---------------------------------~-~~~sp  358 (406)
T PRK07424        316 YELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP---------------------------------I-GVMSA  358 (406)
T ss_pred             HHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc---------------------------------C-CCCCH
Confidence            9999999999984 44443  4577788899999887621                                 1 13589


Q ss_pred             HHHHHHHHHHhcCCCCc
Q 040531          248 RDIAEAALYLASDESKY  264 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~  264 (285)
                      |++|+.+++.+++...+
T Consensus       359 e~vA~~il~~i~~~~~~  375 (406)
T PRK07424        359 DWVAKQILKLAKRDFRN  375 (406)
T ss_pred             HHHHHHHHHHHHCCCCE
Confidence            99999999999776654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=4.9e-25  Score=231.38  Aligned_cols=182  Identities=17%  Similarity=0.186  Sum_probs=158.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCc-------------------------------------------
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDD-------------------------------------------   49 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~-------------------------------------------   49 (285)
                      +++++|||||++|||++++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999988 69999999982                                           


Q ss_pred             ----hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 040531           50 ----AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR  125 (285)
Q Consensus        50 ----~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~  125 (285)
                          ....+..+.+.+.+.++.++.||++|.++++++++++.+. ++||+||||||+...    ..+.+.+.++|++.|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~----~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD----KHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC----CCcccCCHHHHHHHHH
Confidence                1111223334445678899999999999999999999877 689999999998654    5788899999999999


Q ss_pred             hhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       126 ~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                      +|+.|++.+++++.+.+.    ++||++||..+..+.++...|+++|++++.+++.++.++..  ++|++|+||+++|+|
T Consensus      2151 ~nv~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~--irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2151 TKVDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS--AKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEECCeecCCc
Confidence            999999999999877553    46999999999999999999999999999999999999754  999999999999988


Q ss_pred             h
Q 040531          206 L  206 (285)
Q Consensus       206 ~  206 (285)
                      .
T Consensus      2225 ~ 2225 (2582)
T TIGR02813      2225 V 2225 (2582)
T ss_pred             c
Confidence            5

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=9.7e-24  Score=169.44  Aligned_cols=175  Identities=20%  Similarity=0.280  Sum_probs=147.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHH---HHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIAL---ADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~---~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      |+++||||+++||++++++|+++|+ .|++++|+.+.....   .+.+.+.+.++.++.+|+++.+++.++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 578888876544332   234444466788999999999999999999988899


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|.+|||+|....    .++.+.+.+++++.+++|+.+++.+.+.+.    +.+.+++++++|..+..+.++...|+++
T Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~~~~~~~~~y~~s  152 (180)
T smart00822       81 PLRGVIHAAGVLDD----GLLANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGVLGNPGQANYAAA  152 (180)
T ss_pred             CeeEEEEccccCCc----cccccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHhcCCCCchhhHHH
Confidence            99999999997543    456778899999999999999999999873    3456899999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCcc
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVA  202 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~  202 (285)
                      |++++.+++.++.    .++++.++.||++.
T Consensus       153 k~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      153 NAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            9999999977644    58889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.91  E-value=2.1e-23  Score=169.87  Aligned_cols=198  Identities=20%  Similarity=0.242  Sum_probs=168.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-----EEEEecCchhhHHHHHHhhcCCC----ceEEEeccCCCHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-----VVIADIDDAAGIALADSLLSSSP----LVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-----v~~~~r~~~~~~~~~~~~~~~~~----~v~~~~~D~s~~~~i~~~~~   84 (285)
                      -.|+++|||++||||.+++.+|++....     +++++|+.++.++.+..+.+..+    ++.++.+|+|+..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            3589999999999999999999987644     77889999999999999877554    58899999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCC----------C-------------CCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKH----------K-------------SITDFDANEFDNIIRINVRGAALGMKYAAKV  141 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~----------~-------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (285)
                      ++..+|.++|.++.|||++......          .             ..-..+.|+....|+.||+|+|.+++.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            9999999999999999986431100          0             1113366788999999999999999999999


Q ss_pred             hcCCCCceEEEEcccccccC---------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhc
Q 040531          142 MVPRRSGCIISTASVASLMG---------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWK  211 (285)
Q Consensus       142 ~~~~~~g~ii~vss~~~~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~  211 (285)
                      +..+....+|++||..+...         ..+..+|..||.+++-+.-++-+.+.+.|+--++++||..-|.+...+..
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            98777779999999877532         33667899999999999999999999999999999999999988776543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.5e-22  Score=186.56  Aligned_cols=222  Identities=15%  Similarity=0.156  Sum_probs=163.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC---------CCceEEEeccCCCHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS---------SPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~---------~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ...||+++||||+|+||++++++|+++|++|++++|+.+.++.+.+.+.+.         ..++.++.+|+++.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            357899999999999999999999999999999999998887776654321         13588999999998887654


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cC
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MG  161 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~  161 (285)
                             ++.+|+||||+|....          ...++...+++|+.+..++++++.+    .+.++||++||.++. .+
T Consensus       157 -------LggiDiVVn~AG~~~~----------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g  215 (576)
T PLN03209        157 -------LGNASVVICCIGASEK----------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVG  215 (576)
T ss_pred             -------hcCCCEEEEccccccc----------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccC
Confidence                   3579999999986421          1124677899999999999998765    346799999998763 23


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .+.. .|. +|+++..+.+.+..++.+.||+++.|+||++.|++.... ..               ..+.....  ..+.
T Consensus       216 ~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t---------------~~v~~~~~--d~~~  275 (576)
T PLN03209        216 FPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ET---------------HNLTLSEE--DTLF  275 (576)
T ss_pred             cccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cc---------------cceeeccc--cccC
Confidence            3222 244 788898999999999999999999999999988754311 00               00000000  1245


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      ++.++.+|||+.++|++++... -.++++.+-+|
T Consensus       276 gr~isreDVA~vVvfLasd~~a-s~~kvvevi~~  308 (576)
T PLN03209        276 GGQVSNLQVAELMACMAKNRRL-SYCKVVEVIAE  308 (576)
T ss_pred             CCccCHHHHHHHHHHHHcCchh-ccceEEEEEeC
Confidence            6678999999999999985431 23455555444

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=1.1e-21  Score=172.25  Aligned_cols=192  Identities=14%  Similarity=0.078  Sum_probs=145.2

Q ss_pred             CCCcEEEEecCCCchhHH--HHHHHHHCCCeEEEEecCchhhH------------HHHHHhhcCCCceEEEeccCCCHHH
Q 040531           13 LEGKIAIVTGGARGIGEA--TVRLFVKHGAKVVIADIDDAAGI------------ALADSLLSSSPLVTYLHCDVSLEQD   78 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~--ia~~la~~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~D~s~~~~   78 (285)
                      -.+|++||||+++|||++  +|+.| +.|+.|+++++..+...            .+.+.+.+.+.++..+.||+++.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            457999999999999999  89999 99999888885432211            2333344445567889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCC-----------------CCCCCC-------------CCCHHHHHHHHHhhh
Q 040531           79 IQNLINVTISKHGRLDILFNNAGVLGNQS-----------------KHKSIT-------------DFDANEFDNIIRINV  128 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~~~~~~-----------------~~~~~~-------------~~~~~~~~~~~~~n~  128 (285)
                      ++++++++.+.+|++|+||||+|......                 ...+..             ..+.++++...  ++
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KV  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hh
Confidence            99999999999999999999999863311                 001111             23344444443  33


Q ss_pred             hhH---HHHH--HHHHHhhcCCCCceEEEEcccccccCCCCC--ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCc
Q 040531          129 RGA---ALGM--KYAAKVMVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGV  201 (285)
Q Consensus       129 ~~~---~~l~--~~~~~~~~~~~~g~ii~vss~~~~~~~~~~--~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v  201 (285)
                      .|.   ..++  +...+.|  ..+++++..|+.++....|.+  ...+.+|++|+.-+|.|+.+|++.|||+|++.+|++
T Consensus       196 Mggedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~  273 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV  273 (398)
T ss_pred             hccchHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence            333   2333  3334455  457999999999988888776  488999999999999999999999999999999999


Q ss_pred             cchhhhhh
Q 040531          202 ATSMLVNA  209 (285)
Q Consensus       202 ~t~~~~~~  209 (285)
                      .|.....+
T Consensus       274 ~T~Ass~I  281 (398)
T PRK13656        274 VTQASSAI  281 (398)
T ss_pred             cchhhhcC
Confidence            99887654

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.89  E-value=9.7e-22  Score=173.84  Aligned_cols=168  Identities=17%  Similarity=0.229  Sum_probs=134.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|++|||||+|+||++++++|+++|  +.|++++|+........+.+.  ..++.++.+|++|.+++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            468999999999999999999999986  789999987665443333331  2468899999999999887764      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                       .+|+|||+||....     +..+.+   ..+.+++|+.+++++++++.+    .+.++||++||.....|   ...|++
T Consensus        74 -~iD~Vih~Ag~~~~-----~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~  137 (324)
T TIGR03589        74 -GVDYVVHAAALKQV-----PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGA  137 (324)
T ss_pred             -cCCEEEECcccCCC-----chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHH
Confidence             58999999996421     122223   346899999999999999876    34568999999754433   467999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      +|++.+.+++.++.++.++|+++++++||.+.+|
T Consensus       138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            9999999999998888888999999999999886

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.89  E-value=4.3e-21  Score=171.47  Aligned_cols=233  Identities=13%  Similarity=0.021  Sum_probs=163.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++||++|||||+|+||++++++|+++|++|++++|+..........+. ...++.++.+|+++.+++.+++++.     .
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            468999999999999999999999999999999988765443333231 2345778999999999998887753     5


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc------------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM------------  160 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~------------  160 (285)
                      +|+|||+|+....        ..+.+++...+++|+.+++.+++++.+ .  ...+++|++||...+.            
T Consensus        76 ~d~vih~A~~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~  144 (349)
T TIGR02622        76 PEIVFHLAAQPLV--------RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYRNDEWVWGYRETD  144 (349)
T ss_pred             CCEEEECCccccc--------ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhCCCCCCCCCccCC
Confidence            8999999985321        234456778899999999999998743 2  2246899999964321            


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCC----CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGK----YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~----~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      +..+...|+.+|.+.+.+++.++.++.+    +++++++++|+.+.+|.....  .           ......+.....+
T Consensus       145 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--~-----------~~~~~~~~~~~~g  211 (349)
T TIGR02622       145 PLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE--D-----------RLIPDVIRAFSSN  211 (349)
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh--h-----------hhhHHHHHHHhcC
Confidence            1234578999999999999999998855    489999999999998742100  0           0000111111111


Q ss_pred             hh------cccCCCCCHHHHHHHHHHHhcCCCC--cccccEEEecCC
Q 040531          237 LA------NLKGVTLKARDIAEAALYLASDESK--YISGHNLVVDGG  275 (285)
Q Consensus       237 ~~------~~~~~~~~~eeva~~~~~l~s~~~~--~~~G~~i~vdgG  275 (285)
                      ..      .....++..+|++++++.++.....  ...|+.+++-+|
T Consensus       212 ~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       212 KIVIIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             CCeEECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            00      1122356788999999887753211  123678998654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=9.5e-21  Score=167.55  Aligned_cols=225  Identities=19%  Similarity=0.192  Sum_probs=159.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.............  ...++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            479999999999999999999999999999998887655443222211  12468899999999998888765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC--------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL--------  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~--------  163 (285)
                      .+|+|||+||....        ..+.+.+...+++|+.+++.+++++.+.+   +.++||++||..+..+..        
T Consensus        77 ~~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~  145 (325)
T PLN02989         77 GCETVFHTASPVAI--------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDV  145 (325)
T ss_pred             CCCEEEEeCCCCCC--------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCc
Confidence            58999999986421        22345578899999999999999988754   246899999976543210        


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          164 --------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       164 --------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                    ....|+.+|.+.+.+++.++.+   +++.+..++|+.+.+|......             ......
T Consensus       146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~-------------~~~~~~  209 (325)
T PLN02989        146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTL-------------NFSVAV  209 (325)
T ss_pred             cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCC-------------CchHHH
Confidence                          0246999999999999988775   4799999999999998643210             000011


Q ss_pred             HHHHHhhh---hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          230 MEELVRGL---ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       230 ~~~~~~~~---~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +.....+-   ......++.++|+|++++.++....   .+..++++|+
T Consensus       210 i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~---~~~~~ni~~~  255 (325)
T PLN02989        210 IVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPS---ANGRYIIDGP  255 (325)
T ss_pred             HHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCcc---cCceEEEecC
Confidence            11111110   0111346778999999998886542   2346788554

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=6.2e-21  Score=154.72  Aligned_cols=173  Identities=25%  Similarity=0.394  Sum_probs=136.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD---AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++|||||.+|||..++++|+++|. ++++++|+.   ....+..+++.+.+.++.+++||++|+++++++++.+.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999985 599999982   3444667777777889999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      |+.|||.||....    .++.+.+.++++..+...+.+...+.+.+.+    ..-..+|++||..+..+.++.+.|+++.
T Consensus        82 i~gVih~ag~~~~----~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN  153 (181)
T PF08659_consen   82 IDGVIHAAGVLAD----APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAAN  153 (181)
T ss_dssp             EEEEEE-----------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHH
T ss_pred             cceeeeeeeeecc----cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHH
Confidence            9999999998754    6888999999999999999999999887644    4557899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCc
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGV  201 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v  201 (285)
                      +.++.+++....    .+..+.+|.-|+.
T Consensus       154 ~~lda~a~~~~~----~g~~~~sI~wg~W  178 (181)
T PF08659_consen  154 AFLDALARQRRS----RGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHH----TTSEEEEEEE-EB
T ss_pred             HHHHHHHHHHHh----CCCCEEEEEcccc
Confidence            999999987655    3567777776644

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=1.7e-20  Score=149.91  Aligned_cols=144  Identities=27%  Similarity=0.433  Sum_probs=118.5

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.+.+++|+++||||++|||+++++.|++.|++|++++|+.+..+...+++.+.+.+..++++|+++.++++++++++.+
T Consensus        10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998887777777765566778899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-------CceEEEEccccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-------SGCIISTASVAS  158 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~ii~vss~~~  158 (285)
                      .++++|++|||||+....   .++.+.+.++ ++  .+|+.+.+...+.+.+.|.+++       .|++..+|+.++
T Consensus        90 ~~G~iDilVnnAG~~~~~---~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKID---SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HcCCCCEEEECCCcCCCC---CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            999999999999986532   4455545444 44  6778888889999988877653       467777777654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=1.7e-19  Score=159.37  Aligned_cols=225  Identities=19%  Similarity=0.176  Sum_probs=156.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh--cCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL--SSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      -+||+++||||+|+||++++++|+++|++|+++.|+.+..+...+...  ....++.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            568999999999999999999999999999998888765443332221  113468889999999998888765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-CC-------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-GG-------  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~~-------  162 (285)
                       .+|+|||+|+....    .     ..+...+.+++|+.++..+++++...   .+..+||++||.++.. +.       
T Consensus        77 -~~d~vih~A~~~~~----~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 -GCDAVFHTASPVFF----T-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             -CCCEEEEeCCCcCC----C-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCC
Confidence             58999999986421    0     11223567899999999999987542   1346899999976531 11       


Q ss_pred             ---------C-----CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH
Q 040531          163 ---------L-----GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE  228 (285)
Q Consensus       163 ---------~-----~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                               |     ....|+.||.+.+.+++.+.++   +++++.+++|+.+.+|.......             ....
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~-------------~~~~  207 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLN-------------FSVE  207 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCC-------------ccHH
Confidence                     0     1356999999999999888775   47999999999999986431100             0001


Q ss_pred             HHHHHHhhh---hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          229 KMEELVRGL---ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       229 ~~~~~~~~~---~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      .+.....+.   ......++.++|+|++++.++....   .++.++++|+
T Consensus       208 ~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~---~~~~yni~~~  254 (322)
T PLN02986        208 LIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPS---ANGRYIIDGP  254 (322)
T ss_pred             HHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcc---cCCcEEEecC
Confidence            111111111   0112346889999999999886542   2346788544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.85  E-value=1.8e-19  Score=160.36  Aligned_cols=234  Identities=16%  Similarity=0.034  Sum_probs=153.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH-HHHHHhh----cCCCceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLL----SSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~-~~~~~~~----~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      -+.++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.    ....++.++.+|++|.+++..+++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            3678999999999999999999999999999999998754311 1112221    1134688999999999999888775


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-ceEEEEcccccccC---
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMG---  161 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~ii~vss~~~~~~---  161 (285)
                      .     .+|+|||+|+.....        ...+.....+++|+.++..+++++.+...+++. -++|++||...+..   
T Consensus        82 ~-----~~d~Vih~A~~~~~~--------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~  148 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA--------VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP  148 (340)
T ss_pred             c-----CCCEEEECCcccchh--------hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC
Confidence            4     599999999974321        122345677899999999999999887653311 26888887532211   


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHhCC---CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHH
Q 040531          162 -------GLGPHAYTVSKHAIVGLTKNTACELGK---YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME  231 (285)
Q Consensus       162 -------~~~~~~Y~asKaa~~~l~~~la~e~~~---~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                             ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+..                 .....+.
T Consensus       149 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~-----------------~~~~~~~  211 (340)
T PLN02653        149 PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR-----------------KITRAVG  211 (340)
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchh-----------------HHHHHHH
Confidence                   113567999999999999999887642   1233344445432221100                 0001111


Q ss_pred             HHHhhh--------hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          232 ELVRGL--------ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       232 ~~~~~~--------~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ....+.        ......++..+|+|++++.++...    .++.+++.+|...
T Consensus       212 ~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~  262 (340)
T PLN02653        212 RIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESH  262 (340)
T ss_pred             HHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCce
Confidence            111110        011224578999999999988653    2456888777654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=3.7e-19  Score=155.50  Aligned_cols=219  Identities=14%  Similarity=0.050  Sum_probs=149.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh--hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA--GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++|++|||||+|+||++++++|+++|++|+++.|+...  .......+.....++.++.+|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            57899999999999999999999999999999986432  222223332223468889999999988876553       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC---CC----
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG---LG----  164 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~---~~----  164 (285)
                      ..|.++|.++...         +.+ .++++.+++|+.+++.+++++.+.+   +.++||++||.++....   +.    
T Consensus        78 ~~d~v~~~~~~~~---------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 GCSGLFCCFDPPS---------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             CCCEEEEeCccCC---------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence            5888988665321         111 2367899999999999999997754   24689999998664211   00    


Q ss_pred             -----C----------ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          165 -----P----------HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       165 -----~----------~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                           +          ..|+.||...+.+++.++++   +++++++|+|+.|.+|........                 
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~-----------------  204 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPY-----------------  204 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhh-----------------
Confidence                 0          15999999999999888765   479999999999998864321000                 


Q ss_pred             HHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +.............++.++|+|++++..+....  ..|. +.+-++
T Consensus       205 ~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~--~~~r-~~~~~~  247 (297)
T PLN02583        205 LKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVS--SYGR-YLCFNH  247 (297)
T ss_pred             hcCCcccCcccCcceEEHHHHHHHHHHHhcCcc--cCCc-EEEecC
Confidence            000000000011136789999999999886432  2454 444433

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.84  E-value=5.7e-19  Score=151.77  Aligned_cols=231  Identities=21%  Similarity=0.149  Sum_probs=170.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHH--HHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA--LADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++|+||||+|.||..|+++|+++||+|+.+.|+++..+.  ...++.....++..+.+|++|.++++.+++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            78999999999999999999999999999999999988444  344554455679999999999999999887       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-CC------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-LG------  164 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-~~------  164 (285)
                      ..|+|+|.|......       ..+  .-.++++..+.|+.++++++...=   .-.|||++||.++.... +.      
T Consensus        78 gcdgVfH~Asp~~~~-------~~~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~v  145 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD-------LED--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSV  145 (327)
T ss_pred             CCCEEEEeCccCCCC-------CCC--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCcc
Confidence            699999999865321       111  223789999999999999985532   35789999999887643 10      


Q ss_pred             -----C----------ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          165 -----P----------HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       165 -----~----------~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                           +          ..|..||.-.+.-+..+|+|   .++...+|.|+.|..|........         ......+.
T Consensus       146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~---------s~~~~l~~  213 (327)
T KOG1502|consen  146 VDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNS---------SLNALLKL  213 (327)
T ss_pred             cccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccch---------hHHHHHHH
Confidence                 1          24888888777776666665   479999999999999887542111         00111122


Q ss_pred             HHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +......+.+....++.++|+|.+.+++.....  -.|+.|.+....+
T Consensus       214 i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  214 IKGLAETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             HhcccccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence            222222333334446899999999999997765  3599998877665

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.84  E-value=1.8e-18  Score=154.81  Aligned_cols=176  Identities=20%  Similarity=0.212  Sum_probs=133.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .++++|||||+|+||++++++|+++|++|++++|+.+........+.. ..++.++.+|+++.+++.++++       .+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~   80 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------GC   80 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------CC
Confidence            577899999999999999999999999999999887665554444322 4568899999999988877764       58


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHH--HHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC---------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEF--DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG---------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~---------  162 (285)
                      |+|||+|+.....   ......+.+.+  ...++.|+.++..+++++.+..   ..++||++||.+.+...         
T Consensus        81 d~Vih~A~~~~~~---~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         81 DGVFHVAASMEFD---VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             CEEEECCccccCC---ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCc
Confidence            9999999975331   11112233333  4577888899999999886642   24689999996544210         


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          163 ----------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       163 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                                      +....|+.||.+.+.+++.++++   +++++.+++|+.+.+|..
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFL  211 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCc
Confidence                            01137999999999999988775   479999999999998854

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.83  E-value=1.7e-18  Score=154.02  Aligned_cols=174  Identities=20%  Similarity=0.195  Sum_probs=132.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH--HhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD--SLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..+++++++|||||+|+||++++++|+++|++|+++.|+.+.......  .+ ...+++.++.+|++|.+++.++++   
T Consensus         4 ~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~---   79 (338)
T PLN00198          4 LTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRAL-QELGDLKIFGADLTDEESFEAPIA---   79 (338)
T ss_pred             ccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhc-CCCCceEEEEcCCCChHHHHHHHh---
Confidence            346778999999999999999999999999999988887654332221  12 112368889999999988877654   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------  161 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------  161 (285)
                          .+|+|||+|+...       ..  ..+.+...+++|+.++..+++++.+..   +.+++|++||.+....      
T Consensus        80 ----~~d~vih~A~~~~-------~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~g~~~~~~~  143 (338)
T PLN00198         80 ----GCDLVFHVATPVN-------FA--SEDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAVSINKLSGT  143 (338)
T ss_pred             ----cCCEEEEeCCCCc-------cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceeeeccCCCCC
Confidence                5899999998531       11  112245678999999999999986632   3468999999765431      


Q ss_pred             ------------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          162 ------------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       162 ------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                                        .++...|+.||.+.+.+++.++.+   +++.+..++|+.|.+|..
T Consensus       144 ~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        144 GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSL  203 (338)
T ss_pred             CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCc
Confidence                              112456999999999999988775   579999999999999853

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.83  E-value=2.3e-18  Score=154.10  Aligned_cols=229  Identities=15%  Similarity=0.086  Sum_probs=155.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEE-EEecCchhhH-HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVV-IADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~-~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      |++|||||+|+||++++++|+++|+.++ ++++...... .....+ ....++.++.+|++|.++++++++.     ..+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPV-AQSERFAFEKVDICDRAELARVFTE-----HQP   75 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhc-ccCCceEEEECCCcChHHHHHHHhh-----cCC
Confidence            5799999999999999999999998755 4554332111 011111 1234678889999999998888764     269


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc---C--CCCceEEEEccccccc--------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV---P--RRSGCIISTASVASLM--------  160 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~g~ii~vss~~~~~--------  160 (285)
                      |+|||+||....        ..+.+.++..+++|+.+++.+++++.+.+.   .  ++..++|++||.....        
T Consensus        76 D~Vih~A~~~~~--------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         76 DCVMHLAAESHV--------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             CEEEECCcccCc--------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCC
Confidence            999999986421        223456788999999999999999987532   1  1235899999854321        


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh
Q 040531          161 -----GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR  235 (285)
Q Consensus       161 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                           +..+.+.|+.||.+.+.+++.+++++   ++++..+.|+.+..|....   .           ......+.....
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~---~-----------~~~~~~~~~~~~  210 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFP---E-----------KLIPLMILNALA  210 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCc---c-----------cHHHHHHHHHhc
Confidence                 12245689999999999999998874   5788888898887764310   0           001111111111


Q ss_pred             hhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          236 GLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       236 ~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +..       .....++.++|+++++..++...   ..|+.+++-+|...
T Consensus       211 ~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        211 GKPLPVYGNGQQIRDWLYVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             CCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            110       01223688999999998888543   25788998888654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.82  E-value=2.6e-18  Score=153.13  Aligned_cols=219  Identities=19%  Similarity=0.211  Sum_probs=152.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH-HHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL-ADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+..... ...+.....++.++.+|+++.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            5788999999999999999999999999999999976643221 22222222468889999999998887765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC----C----
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG----L----  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~----~----  163 (285)
                      .+|+|||+|+...             +++.+.+++|+.++..+++++.+    .+..+||++||..+..+.    +    
T Consensus        81 ~~d~Vih~A~~~~-------------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~  143 (342)
T PLN02214         81 GCDGVFHTASPVT-------------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVV  143 (342)
T ss_pred             cCCEEEEecCCCC-------------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCccc
Confidence            5899999998531             12467899999999999999865    234589999997554321    0    


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH
Q 040531          164 -------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM  230 (285)
Q Consensus       164 -------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                                   ....|+.+|.+.+.+++.++.+   +++++..++|+.|..|........            .....+
T Consensus       144 ~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~------------~~~~~~  208 (342)
T PLN02214        144 DESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINA------------SLYHVL  208 (342)
T ss_pred             CcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCc------------hHHHHH
Confidence                         1246999999999999988776   479999999999998853211000            000000


Q ss_pred             HHHHhh----hhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          231 EELVRG----LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       231 ~~~~~~----~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                       ....+    .......++.++|+|++++.++....  ..| .+++-+
T Consensus       209 -~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~--~~g-~yn~~~  252 (342)
T PLN02214        209 -KYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS--ASG-RYLLAE  252 (342)
T ss_pred             -HHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc--cCC-cEEEec
Confidence             11111    00111245789999999998885532  234 455543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=3e-18  Score=153.24  Aligned_cols=214  Identities=19%  Similarity=0.160  Sum_probs=149.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..|++|||||+|+||++++++|+++|++|++++|+.+...........  ...++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            567999999999999999999999999999999887655444332211  12358889999999988887765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC----C----
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG----L----  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~----~----  163 (285)
                      .+|+|||+|+....       .  ..+.....+++|+.++..+++++.+..   ...+||++||.+...+.    +    
T Consensus        77 ~~d~ViH~A~~~~~-------~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E  144 (351)
T PLN02650         77 GCTGVFHVATPMDF-------E--SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDE  144 (351)
T ss_pred             CCCEEEEeCCCCCC-------C--CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCc
Confidence            48999999985321       1  112235678999999999999987642   13589999997543210    1    


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          164 --------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       164 --------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                    +...|+.||.+.+.+++.++.+   +|+++..++|+.+.+|........            .....
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~------------~~~~~  209 (351)
T PLN02650        145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPP------------SLITA  209 (351)
T ss_pred             ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCc------------cHHHH
Confidence                          1137999999999999998876   579999999999999864321110            00000


Q ss_pred             HHHHHhh---h-hcccCCCCCHHHHHHHHHHHhcCC
Q 040531          230 MEELVRG---L-ANLKGVTLKARDIAEAALYLASDE  261 (285)
Q Consensus       230 ~~~~~~~---~-~~~~~~~~~~eeva~~~~~l~s~~  261 (285)
                      +......   . ......++.++|++++++.++...
T Consensus       210 ~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        210 LSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             HHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCc
Confidence            0000000   0 001135789999999999998653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=1.1e-17  Score=147.66  Aligned_cols=213  Identities=21%  Similarity=0.227  Sum_probs=146.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh--hcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL--LSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+...........  .....++.++.+|+++.+++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            4789999999999999999999999999999998765433222111  1113468899999999988877765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cC-C-------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MG-G-------  162 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~-~-------  162 (285)
                      .+|+|||+|+....     ..    .+...+.+++|+.++..+++++....   +..++|++||.++. .+ .       
T Consensus        76 ~~d~Vih~A~~~~~-----~~----~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 GCEGVFHTASPFYH-----DV----TDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             CCCEEEEeCCcccC-----CC----CChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCc
Confidence            58999999986421     00    11124778999999999999986532   34589999997542 11 1       


Q ss_pred             --------CC-----CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          163 --------LG-----PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       163 --------~~-----~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                              |.     ...|+.+|.+.+.+++.+.++   +++++..++|+.+.+|.......             .....
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~-------------~~~~~  207 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLN-------------TSAEA  207 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCC-------------chHHH
Confidence                    10     146999999999999887665   47999999999999986321100             00011


Q ss_pred             HHHHHhh---hhcccCCCCCHHHHHHHHHHHhcCC
Q 040531          230 MEELVRG---LANLKGVTLKARDIAEAALYLASDE  261 (285)
Q Consensus       230 ~~~~~~~---~~~~~~~~~~~eeva~~~~~l~s~~  261 (285)
                      +.....+   .......++.++|+|++++.++...
T Consensus       208 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        208 ILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             HHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence            1111111   0111234688999999999988653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=2.1e-17  Score=147.68  Aligned_cols=174  Identities=18%  Similarity=0.176  Sum_probs=127.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh----cCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL----SSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      |.|++|+++||||+|+||++++++|+++|++|++++|...........+.    ....++.++.+|+++.+++..+++..
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            45778999999999999999999999999999999875433222111111    12346888999999999998877642


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----  161 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----  161 (285)
                           .+|+|||+|+....        ..+.+++...+++|+.++..+++++..    .+..++|++||......     
T Consensus        81 -----~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~  143 (352)
T PLN02240         81 -----RFDAVIHFAGLKAV--------GESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVP  143 (352)
T ss_pred             -----CCCEEEEccccCCc--------cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCC
Confidence                 69999999986421        113345678899999999999987633    33468999999643211     


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccc
Q 040531          162 ------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVAT  203 (285)
Q Consensus       162 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t  203 (285)
                            ..+...|+.+|.+.+.+++.++.+  ..++++..+.|+.+..
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G  189 (352)
T PLN02240        144 CTEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVG  189 (352)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCC
Confidence                  113568999999999999988765  2357777777765554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=2.8e-17  Score=146.50  Aligned_cols=157  Identities=11%  Similarity=0.030  Sum_probs=114.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-----hHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-----GIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     +....+.... ...++.++++|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987642     2211111111 1245889999999999998887753   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---------  160 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---------  160 (285)
                        .+|+|||+|+.....        ...+.-...+++|+.++..+++++.+.-. .+..++|++||...+.         
T Consensus        78 --~~d~ViH~Aa~~~~~--------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E  146 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK--------VSFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNE  146 (343)
T ss_pred             --CCCEEEECCcccccc--------hhhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCC
Confidence              589999999975321        11222356778999999999999876421 1124789999864321         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHh
Q 040531          161 --GGLGPHAYTVSKHAIVGLTKNTACEL  186 (285)
Q Consensus       161 --~~~~~~~Y~asKaa~~~l~~~la~e~  186 (285)
                        +..+.+.|+.||.+.+.+++.++.++
T Consensus       147 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       147 TTPFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence              11245689999999999999998875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.79  E-value=2.3e-17  Score=147.33  Aligned_cols=237  Identities=14%  Similarity=0.018  Sum_probs=158.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-----CCCceEEEeccCCCHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-----SSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      ..-+++|+++||||+|.||++++++|+++|++|++++|..............     ...++.++.+|+.|.+++..+++
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            3456889999999999999999999999999999999865432222222211     12357889999999888777664


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--  162 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--  162 (285)
                             .+|+|||.|+.....        ...++....+++|+.++..+++++..    .+..++|++||.......  
T Consensus        90 -------~~d~ViHlAa~~~~~--------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~  150 (348)
T PRK15181         90 -------NVDYVLHQAALGSVP--------RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPD  150 (348)
T ss_pred             -------CCCEEEECccccCch--------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCC
Confidence                   489999999864221        12223445799999999999998754    334589999986543211  


Q ss_pred             ---------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          163 ---------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       163 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                               .+...|+.+|.+.+.+++.++.+   +++++..+.|+.+..|.......          ........+...
T Consensus       151 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~----------~~~~i~~~~~~~  217 (348)
T PRK15181        151 LPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGA----------YSAVIPRWILSL  217 (348)
T ss_pred             CCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCc----------cccCHHHHHHHH
Confidence                     13457999999999999887665   47999999999998875321000          000011111111


Q ss_pred             Hhhhh-cc------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          234 VRGLA-NL------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       234 ~~~~~-~~------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..+.. ..      ...++..+|++++++.++........|+.+++-+|...
T Consensus       218 ~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        218 LKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             HcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence            11110 01      12357799999999877643222236788999877654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.79  E-value=2.3e-17  Score=144.89  Aligned_cols=225  Identities=17%  Similarity=0.099  Sum_probs=152.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++||||+|+||++++++|++.|  ++|++++|... ...+..+.+. ...++.++.+|++|.+++.++++..     ++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE-DNPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc-cCCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  77888876432 1111122221 1246788999999999998887642     59


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------------  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------------  161 (285)
                      |+|||+|+....        +.+.+.++..+++|+.++..+++++.+.+.   +.++|++||......            
T Consensus        75 d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~  143 (317)
T TIGR01181        75 DAVVHFAAESHV--------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTP  143 (317)
T ss_pred             CEEEEcccccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCC
Confidence            999999986421        123445677899999999999998866542   347999998543211            


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc-
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL-  240 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  240 (285)
                      ..+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+.....              ......+.....+...+ 
T Consensus       144 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~--------------~~~~~~~~~~~~~~~~~~  206 (317)
T TIGR01181       144 LAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPE--------------KLIPLMITNALAGKPLPV  206 (317)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcc--------------cHHHHHHHHHhcCCCceE
Confidence            113457999999999999998776   468999999998887643210              00111111111111101 


Q ss_pred             ------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          241 ------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       241 ------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                            ...++.++|+++++..++.+.   ..|+.+++-+|...
T Consensus       207 ~~~g~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~  247 (317)
T TIGR01181       207 YGDGQQVRDWLYVEDHCRAIYLVLEKG---RVGETYNIGGGNER  247 (317)
T ss_pred             eCCCceEEeeEEHHHHHHHHHHHHcCC---CCCceEEeCCCCce
Confidence                  112467899999999888643   35788888776543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.79  E-value=1.3e-17  Score=153.20  Aligned_cols=180  Identities=15%  Similarity=0.012  Sum_probs=133.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh----------------HHHHHHhh-cCCCceEEEeccC
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG----------------IALADSLL-SSSPLVTYLHCDV   73 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~----------------~~~~~~~~-~~~~~v~~~~~D~   73 (285)
                      ..+++|++|||||+|+||++++++|+++|++|+++++.....                ....+.+. ....++.++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            457899999999999999999999999999999987432110                00111111 1134688999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEE
Q 040531           74 SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIIST  153 (285)
Q Consensus        74 s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~v  153 (285)
                      +|.+++.++++..     ++|+|||+|+...     .+....+++++...+++|+.+++.+++++...-   ...++|++
T Consensus       123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~-----~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~~V~~  189 (442)
T PLN02572        123 CDFEFLSEAFKSF-----EPDAVVHFGEQRS-----APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCHLVKL  189 (442)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCCccc-----ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCccEEEE
Confidence            9999998887753     6999999987532     223344556677889999999999999886532   12479999


Q ss_pred             cccccccC------------------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          154 ASVASLMG------------------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       154 ss~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                      ||...+..                        ..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+..|..
T Consensus       190 SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        190 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             ecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence            98753311                        112357999999999999887765   579999999999998863

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.78  E-value=8.9e-17  Score=142.88  Aligned_cols=238  Identities=14%  Similarity=0.104  Sum_probs=151.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++|||||+|+||++++++|+++|++|++++|..+........+.+ ...++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            689999999999999999999999999988654333322222222 134577889999999988887653     36999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------------C
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------------L  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------------~  163 (285)
                      |||+|+.....        ...+...+.+++|+.++..+++++..    .+.+++|++||.......            .
T Consensus        77 vvh~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~  144 (338)
T PRK10675         77 VIHFAGLKAVG--------ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_pred             EEECCcccccc--------chhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCC
Confidence            99999875321        11233456789999999999887643    345689999996533110            2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh-----
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA-----  238 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  238 (285)
                      +...|+.+|.+.+.+++.++.+..  ++++..+.|+.+..+.....+...    ..+.+ ...-..+........     
T Consensus       145 p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~----~~~~~-~~~~~~~~~~~~~~~~~~~~  217 (338)
T PRK10675        145 PQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGED----PQGIP-NNLMPYIAQVAVGRRDSLAI  217 (338)
T ss_pred             CCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccC----CCCCh-hHHHHHHHHHHhcCCCceEE
Confidence            357899999999999999876632  477777877666654321111100    00000 000011111111100     


Q ss_pred             ----------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 ----------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ----------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                                .....++.++|+|++++.++........|+.+++-+|...
T Consensus       218 ~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~  267 (338)
T PRK10675        218 FGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGS  267 (338)
T ss_pred             eCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCce
Confidence                      0012357899999998887754222234688998877654

>PLN02686 cinnamoyl-CoA reductase

Probab=99.77  E-value=8.5e-17  Score=144.61  Aligned_cols=174  Identities=14%  Similarity=0.140  Sum_probs=128.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC------CCceEEEeccCCCHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS------SPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      ..++++|++|||||+|+||++++++|+++|++|+++.|+.+....+. .+...      ..++.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            44688999999999999999999999999999999888866544432 22110      135788999999999988877


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc-ccC-
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS-LMG-  161 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~-~~~-  161 (285)
                      +       .+|.++|.|+......    ...    ......++|+.+...+++++...   .+..++|++||..+ ..+ 
T Consensus       127 ~-------~~d~V~hlA~~~~~~~----~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~  188 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAG----LSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQ  188 (367)
T ss_pred             H-------hccEEEecCeeecccc----ccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccc
Confidence            5       4789999988753311    000    11244678899999998886542   13458999999631 110 


Q ss_pred             ---C------------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          162 ---G------------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       162 ---~------------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                         .                  .+...|+.+|.+.+.+++.++.+   +|+++++++|+.|.+|.
T Consensus       189 ~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        189 NYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPG  250 (367)
T ss_pred             cCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCC
Confidence               0                  01246999999999999988775   58999999999999985

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=1.4e-16  Score=142.38  Aligned_cols=227  Identities=16%  Similarity=0.080  Sum_probs=150.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCe-EEEEecCch--hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDA--AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++|||||+|+||++++++|+++|+. |+.+++...  ..+... .+. ...++.++.+|++|.+++.++++.     ..+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ-----HQP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh-----cCC
Confidence            5899999999999999999999976 555554321  111111 111 134578899999999999888764     269


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-----CCceEEEEcccccccC-------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-----RSGCIISTASVASLMG-------  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~ii~vss~~~~~~-------  161 (285)
                      |+|||+|+.....        .+.+..++.+++|+.++..+++++.+.|...     +..++|++||...+..       
T Consensus        75 d~vih~A~~~~~~--------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  146 (352)
T PRK10084         75 DAVMHLAAESHVD--------RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEV  146 (352)
T ss_pred             CEEEECCcccCCc--------chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccc
Confidence            9999999864321        1122346689999999999999998876321     2347999998643221       


Q ss_pred             --------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          162 --------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       162 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                    ..+...|+.+|.+.+.+++.++.++   ++++..+.|+.+..|....   .           ....
T Consensus       147 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~---~-----------~~~~  209 (352)
T PRK10084        147 ENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFP---E-----------KLIP  209 (352)
T ss_pred             cccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCc---c-----------chHH
Confidence                          1234689999999999999998874   5677778888777764210   0           0011


Q ss_pred             HHHHHHHhhhh-c------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          228 EKMEELVRGLA-N------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       228 ~~~~~~~~~~~-~------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..+.....+.. .      ....++.++|+++++..++...   ..|+.+++-+|-..
T Consensus       210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             HHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence            11111111110 0      1123578999999998887643   25788888776543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.5e-16  Score=144.22  Aligned_cols=229  Identities=17%  Similarity=0.183  Sum_probs=171.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++||++|||||+|.||+++++++++.+.. +++++|++-..-....++.+.  ..++.++-+|+.|.+.+..+++..  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            479999999999999999999999999854 888999988888887788664  467899999999999998887632  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                         ++|+|+|.|+.-.     =|+-+..   ..+...+|++|+.++++++..    .+-.++|.+|+--+..|   -+.|
T Consensus       325 ---kvd~VfHAAA~KH-----VPl~E~n---P~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~P---tNvm  386 (588)
T COG1086         325 ---KVDIVFHAAALKH-----VPLVEYN---PEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNP---TNVM  386 (588)
T ss_pred             ---CCceEEEhhhhcc-----CcchhcC---HHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCC---chHh
Confidence               6999999998743     2443433   556789999999999999966    44567999999877665   4789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh--hcc--cCCC
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL--ANL--KGVT  244 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~  244 (285)
                      +++|...+.++.+++.+....+-++.++.-|.|-.....              ..+-..+.+++- ..+  ..|  ...+
T Consensus       387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS--------------ViPlFk~QI~~G-gplTvTdp~mtRyf  451 (588)
T COG1086         387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS--------------VIPLFKKQIAEG-GPLTVTDPDMTRFF  451 (588)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC--------------CHHHHHHHHHcC-CCccccCCCceeEE
Confidence            999999999999999877655688999999988652211              111111111110 000  001  1225


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++.+|.++.++......   -.|+++..|-|-+.
T Consensus       452 MTI~EAv~LVlqA~a~~---~gGeifvldMGepv  482 (588)
T COG1086         452 MTIPEAVQLVLQAGAIA---KGGEIFVLDMGEPV  482 (588)
T ss_pred             EEHHHHHHHHHHHHhhc---CCCcEEEEcCCCCe
Confidence            77888888888876543   48899999988654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.75  E-value=1.7e-16  Score=135.40  Aligned_cols=201  Identities=15%  Similarity=0.133  Sum_probs=132.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH-HHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE-QDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~i~~~~   90 (285)
                      +.++++++||||+|+||++++++|+++|++|+++.|+.++......    ...++.++++|+++. +++.+       ..
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~-------~~   82 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVE-------AI   82 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHH-------Hh
Confidence            4568899999999999999999999999999999998776543321    134688999999983 33222       22


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---CCCCCc
Q 040531           91 -GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---GGLGPH  166 (285)
Q Consensus        91 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---~~~~~~  166 (285)
                       ..+|+||+++|.....   .+.         ..+++|+.++..+++++.    +.+.++||++||.+...   +.+...
T Consensus        83 ~~~~d~vi~~~g~~~~~---~~~---------~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~~~~~~~  146 (251)
T PLN00141         83 GDDSDAVICATGFRRSF---DPF---------APWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAMGQILNP  146 (251)
T ss_pred             hcCCCEEEECCCCCcCC---CCC---------CceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCcccccCc
Confidence             2699999998864211   111         124688888888888864    34567999999986422   222334


Q ss_pred             cchhhHHHHHHHHHHHHHH--hCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          167 AYTVSKHAIVGLTKNTACE--LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e--~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      .|...|.+...+...+..|  +...+++++.|+||++.++........        .+              ........
T Consensus       147 ~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~--------~~--------------~~~~~~~~  204 (251)
T PLN00141        147 AYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM--------EP--------------EDTLYEGS  204 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE--------CC--------------CCccccCc
Confidence            5666665444333323333  456789999999999987643211100        00              00011224


Q ss_pred             CCHHHHHHHHHHHhcCC
Q 040531          245 LKARDIAEAALYLASDE  261 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~  261 (285)
                      ++++|+|+.++.++...
T Consensus       205 i~~~dvA~~~~~~~~~~  221 (251)
T PLN00141        205 ISRDQVAEVAVEALLCP  221 (251)
T ss_pred             ccHHHHHHHHHHHhcCh
Confidence            69999999999998554

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=3.4e-16  Score=131.13  Aligned_cols=225  Identities=19%  Similarity=0.105  Sum_probs=157.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCe--EEEEecCchhhH-HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAK--VVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~--v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +++|||||+|.||.++++.+.++...  |+.+|.-.-... +....+ ...+++.++++|+.|.+.+.+++++-     .
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~-----~   74 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADV-EDSPRYRFVQGDICDRELVDRLFKEY-----Q   74 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhh-hcCCCceEEeccccCHHHHHHHHHhc-----C
Confidence            47899999999999999999988743  666664222111 111112 23578999999999999988887642     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-------------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-------------  159 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-------------  159 (285)
                      +|+++|-|+=        +-.+-+.++-...+++|+.|++.++.++..+..+   -+++.||.-.-.             
T Consensus        75 ~D~VvhfAAE--------SHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~  143 (340)
T COG1088          75 PDAVVHFAAE--------SHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTET  143 (340)
T ss_pred             CCeEEEechh--------ccccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccC
Confidence            9999999874        3345566777788999999999999999887632   478988874322             


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          160 MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       160 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      .+..+.++|+|||||...|++++.+-   +|+.+....+..-..|...              +-.-.+-.+.....+..-
T Consensus       144 tp~~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqf--------------pEKlIP~~I~nal~g~~l  206 (340)
T COG1088         144 TPYNPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQF--------------PEKLIPLMIINALLGKPL  206 (340)
T ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcC--------------chhhhHHHHHHHHcCCCC
Confidence            12235689999999999999999886   5788888887666555421              111122222222222222


Q ss_pred             cc-------CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          240 LK-------GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       240 ~~-------~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |.       ...+-+||-+.++...+....   .|+++++.||--
T Consensus       207 pvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~---~GE~YNIgg~~E  248 (340)
T COG1088         207 PVYGDGLQIRDWLYVEDHCRAIDLVLTKGK---IGETYNIGGGNE  248 (340)
T ss_pred             ceecCCcceeeeEEeHhHHHHHHHHHhcCc---CCceEEeCCCcc
Confidence            21       124668899999988886643   499999999853

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.74  E-value=3.4e-16  Score=138.27  Aligned_cols=212  Identities=19%  Similarity=0.161  Sum_probs=148.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++++||||+|+||+.++++|+++|++|++++|+.+.....    .  ...+.++.+|+++.+++.++++       .+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA-------GCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            4699999999999999999999999999999986653221    1  2357889999999998877765       5899


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------------  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------------  163 (285)
                      |||+|+....          ..+++.+.+++|+.++..+++++..    .+.+++|++||.......+            
T Consensus        68 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  133 (328)
T TIGR03466        68 LFHVAADYRL----------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSS  133 (328)
T ss_pred             EEEeceeccc----------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCC
Confidence            9999975311          1123567789999999999998754    3346899999965543211            


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh-hhh-
Q 040531          164 ---GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-GLA-  238 (285)
Q Consensus       164 ---~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  238 (285)
                         ....|+.+|.+.+.+++.++.+   +++++..+.|+.+..+.......              ....+..... ... 
T Consensus       134 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~--------------~~~~~~~~~~~~~~~  196 (328)
T TIGR03466       134 LDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTP--------------TGRIIVDFLNGKMPA  196 (328)
T ss_pred             cccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCc--------------HHHHHHHHHcCCCce
Confidence               1347999999999999998765   47899999999887764221100              0011111111 100 


Q ss_pred             --cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          239 --NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       239 --~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                        .....++.++|+|+++..++...   ..|+.+.+.|
T Consensus       197 ~~~~~~~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       197 YVDTGLNLVHVDDVAEGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             eeCCCcceEEHHHHHHHHHHHHhCC---CCCceEEecC
Confidence              01122467999999998888553   3678888853

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.74  E-value=7.1e-16  Score=138.03  Aligned_cols=225  Identities=16%  Similarity=0.155  Sum_probs=147.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhH---HHHHHhhcC-------C-CceEEEeccCCCHH------
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGI---ALADSLLSS-------S-PLVTYLHCDVSLEQ------   77 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~---~~~~~~~~~-------~-~~v~~~~~D~s~~~------   77 (285)
                      +++||||+|+||++++++|+++|  ++|+++.|+.+...   .+.+.+...       . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  67999998765321   222222110       1 47899999998642      


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ....+.       ..+|+|||||+.....           ..+...+++|+.++..+++.+..    .+..+++++||..
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~  138 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTIS  138 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEcccc
Confidence            222222       3699999999875210           12566788999999998887754    2334599999986


Q ss_pred             cccCC----------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCC
Q 040531          158 SLMGG----------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGK  221 (285)
Q Consensus       158 ~~~~~----------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~  221 (285)
                      .....                .....|+.+|.+.+.+++.++.    .|++++.++||.+.++.....+..         
T Consensus       139 v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~---------  205 (367)
T TIGR01746       139 VLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINS---------  205 (367)
T ss_pred             ccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCc---------
Confidence            54321                1134799999999999887654    389999999999988622111110         


Q ss_pred             CchHHHHHHHHHHh-h-hhcc---cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          222 PCEEEEEKMEELVR-G-LANL---KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       222 ~~~~~~~~~~~~~~-~-~~~~---~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                       .......+..... + +...   ....+.+++++++++.++.......+|+.+++.++..
T Consensus       206 -~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~  265 (367)
T TIGR01746       206 -SDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP  265 (367)
T ss_pred             -hhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence             0001111111111 0 1111   1125788999999999987655434588999988644

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.74  E-value=1.7e-16  Score=137.23  Aligned_cols=225  Identities=17%  Similarity=0.216  Sum_probs=154.7

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           19 IVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        19 lItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      |||||+|.||++++++|+++|  ++|.+++++.......  .+ .......++.+|++|.+++.++++       ..|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~-~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DL-QKSGVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hh-hcccceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  7899888776543211  11 112233489999999999998876       68999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC---C-C---------
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---G-L---------  163 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~---~-~---------  163 (285)
                      ||.|+.....         .....++++++|+.|+-++++++..    .+-.++|++||......   . +         
T Consensus        71 ~H~Aa~~~~~---------~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~  137 (280)
T PF01073_consen   71 FHTAAPVPPW---------GDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTP  137 (280)
T ss_pred             EEeCcccccc---------CcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCc
Confidence            9999875331         1334677899999999999998865    35678999999876543   1 0         


Q ss_pred             ----CCccchhhHHHHHHHHHHHHH-HhCC-CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH--Hh
Q 040531          164 ----GPHAYTVSKHAIVGLTKNTAC-ELGK-YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL--VR  235 (285)
Q Consensus       164 ----~~~~Y~asKaa~~~l~~~la~-e~~~-~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  235 (285)
                          ....|+.||+..+.++..... ++.+ ..++..+|+|..|..|.-....+.             ..+....-  .-
T Consensus       138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~-------------~~~~~~~g~~~~  204 (280)
T PF01073_consen  138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR-------------LVKMVRSGLFLF  204 (280)
T ss_pred             ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch-------------hhHHHHhcccce
Confidence                234799999999999988655 2221 248889999999988864332211             01111100  00


Q ss_pred             hhh--cccCCCCCHHHHHHHHHHHhcC---C--CCcccccEEEecCCcccc
Q 040531          236 GLA--NLKGVTLKARDIAEAALYLASD---E--SKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       236 ~~~--~~~~~~~~~eeva~~~~~l~s~---~--~~~~~G~~i~vdgG~~~~  279 (285)
                      ...  .-...++.++++|.+++..+..   .  ...+.||.+.+..|-...
T Consensus       205 ~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  205 QIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             eecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            000  0011256789999988765432   2  356799999988876553

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.73  E-value=8.1e-16  Score=135.65  Aligned_cols=236  Identities=17%  Similarity=0.071  Sum_probs=152.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|+||++++++|+++|++|++++|...........+.+ ..++.++.+|+++.+++.++++.     +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER-ITRVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc-ccceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            479999999999999999999999999887654432222222221 12577889999999998887663     479999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CCC
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LGP  165 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~~  165 (285)
                      ||+||.....        ...++..+.++.|+.++..+++++.+    .+..++|++||.......           .+.
T Consensus        75 v~~ag~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~  142 (328)
T TIGR01179        75 IHFAGLIAVG--------ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI  142 (328)
T ss_pred             EECccccCcc--------hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCC
Confidence            9999975321        12234456788999999999887643    334689998886432111           124


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh--------
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL--------  237 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  237 (285)
                      ..|+.+|++++.+++.++.+.  .++++..+.|+.+..+.....+....      ......-..+.....+.        
T Consensus       143 ~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  214 (328)
T TIGR01179       143 NPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDP------PGITHLIPYACQVAVGKRDKLTIFG  214 (328)
T ss_pred             CchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCC------cccchHHHHHHHHHHhCCCCeEEeC
Confidence            679999999999999987752  46889999998888764221110000      00000001111111100        


Q ss_pred             ---hcc----cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          238 ---ANL----KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       238 ---~~~----~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                         ..+    ...++.++|++++++.++........|+.+++-+|...
T Consensus       215 ~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       215 TDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             CcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence               000    11246789999999988854322345788888776544

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=5.8e-17  Score=138.16  Aligned_cols=223  Identities=17%  Similarity=0.159  Sum_probs=148.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcC--CCce----EEEeccCCCHHHHHHHHHHHHHHc
Q 040531           18 AIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSS--SPLV----TYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~--~~~v----~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +|||||+|.||++++++|++.+ ..++++++++..+-....++.+.  ..++    .++.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            6999999999999999999998 56999999999999988888532  2233    45689999999988887642    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                       ++|+|+|.|+.-..     ++.+.   ...+.+++|+.|+.++++++...    +-.++|++|+--+..|   .+.|++
T Consensus        77 -~pdiVfHaAA~KhV-----pl~E~---~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~P---tnvmGa  140 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV-----PLMED---NPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVNP---TNVMGA  140 (293)
T ss_dssp             -T-SEEEE------H-----HHHCC---CHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-----SHHHH
T ss_pred             -CCCEEEEChhcCCC-----ChHHh---CHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCCC---CcHHHH
Confidence             79999999987432     33332   35677999999999999999764    4568999999877654   478999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh--hccc--CCCCC
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL--ANLK--GVTLK  246 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~  246 (285)
                      ||...+.++.+.+....+.+.++.+|.-|.|-....              +..+-..+.++.- ..+  ..|.  +.+++
T Consensus       141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G--------------SVip~F~~Qi~~g-~PlTvT~p~mtRffmt  205 (293)
T PF02719_consen  141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG--------------SVIPLFKKQIKNG-GPLTVTDPDMTRFFMT  205 (293)
T ss_dssp             HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT--------------SCHHHHHHHHHTT-SSEEECETT-EEEEE-
T ss_pred             HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC--------------cHHHHHHHHHHcC-CcceeCCCCcEEEEec
Confidence            999999999999988766778999999888754221              1111111111110 001  0111  22589


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++|.++.++..+.-.   ..|+++..|-|...
T Consensus       206 i~EAv~Lvl~a~~~~---~~geifvl~mg~~v  234 (293)
T PF02719_consen  206 IEEAVQLVLQAAALA---KGGEIFVLDMGEPV  234 (293)
T ss_dssp             HHHHHHHHHHHHHH-----TTEEEEE---TCE
T ss_pred             HHHHHHHHHHHHhhC---CCCcEEEecCCCCc
Confidence            999999998877443   37899999998765

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.71  E-value=8.6e-16  Score=129.31  Aligned_cols=217  Identities=20%  Similarity=0.222  Sum_probs=157.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      ||||||+|.||.+++++|+++|+.|+.+.|+...........     ++.++.+|++|.+.++++++..     .+|.||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            799999999999999999999999888888777654443322     6899999999999999988754     799999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CCCc
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LGPH  166 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~~~  166 (285)
                      |+|+....        ..+.+.....++.|+.+...+++++...    +..++|++||.......           .+..
T Consensus        71 ~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~  138 (236)
T PF01370_consen   71 HLAAFSSN--------PESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLS  138 (236)
T ss_dssp             EEBSSSSH--------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSS
T ss_pred             Eeeccccc--------cccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence            99986421        1123556778889999998888887653    33689999996443221           1235


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh--c-----
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA--N-----  239 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----  239 (285)
                      .|+.+|...+.+.+.+....   ++++..+.|+.+..+.....           .........+.....+..  .     
T Consensus       139 ~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (236)
T PF01370_consen  139 PYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNN-----------NSSSFLPSLIRQALKGKPIKIPGDGS  204 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSS-----------STSSHHHHHHHHHHTTSSEEEESTSS
T ss_pred             cccccccccccccccccccc---cccccccccccccccccccc-----------ccccccchhhHHhhcCCcccccCCCC
Confidence            69999999999999998864   79999999999998871000           000112223333332210  0     


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEe
Q 040531          240 LKGVTLKARDIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      ....++..+|++++++.++....  ..|+.+++
T Consensus       205 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  205 QVRDFIHVDDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             CccceEEHHHHHHHHHHHHhCCC--CCCCEEEe
Confidence            11224788999999999997765  67788776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.71  E-value=2.3e-15  Score=136.30  Aligned_cols=237  Identities=16%  Similarity=0.137  Sum_probs=150.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhh-cCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLL-SSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++.+++|||||+|.||++++++|+++ |++|++++|+.+....+..... ....++.++.+|++|.+.+.++++     
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            356678999999999999999999998 5899999987655433221110 012468899999999988877664     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-------  162 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-------  162 (285)
                        .+|+|||+|+.....    ...    .+-.+.+..|+.+...+++++..    .+ .++|++||...+...       
T Consensus        86 --~~d~ViHlAa~~~~~----~~~----~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e  150 (386)
T PLN02427         86 --MADLTINLAAICTPA----DYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPK  150 (386)
T ss_pred             --cCCEEEEcccccChh----hhh----hChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCc
Confidence              489999999864321    111    11223456799999988887643    22 589999996432110       


Q ss_pred             --C------------------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccc
Q 040531          163 --L------------------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDC  216 (285)
Q Consensus       163 --~------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~  216 (285)
                        |                        ....|+.+|.+.+.+++.++..   +++.+..++|+.|..|...... .... 
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~-~~~~-  225 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIP-GIDG-  225 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccc-cccc-
Confidence              0                        1236999999999999876543   5799999999999987531100 0000 


Q ss_pred             cCCCCCchHHHHHHHHHHhhhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          217 MDSGKPCEEEEEKMEELVRGLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                       ............+.....+..       .....++.++|++++++.++.... ...|+.+++-+|
T Consensus       226 -~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        226 -PSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             -cccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence             000000001111111111111       011236789999999998885432 235788888765

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.68  E-value=8.4e-15  Score=130.79  Aligned_cols=226  Identities=13%  Similarity=0.131  Sum_probs=147.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC-CHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS-LEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s-~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++|||||+|.||++++++|++. |++|++++|+.+......     ....+.++.+|++ +.+.+.++++       .+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV-----NHPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc-----cCCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            46999999999999999999986 699999998664432211     1245888999998 6666555433       58


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------  162 (285)
                      |+|||+|+...+.    .    ..++.+..+++|+.+...++.++..    .+ .++|++||...+...           
T Consensus        70 d~ViH~aa~~~~~----~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~  136 (347)
T PRK11908         70 DVILPLVAIATPA----T----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASP  136 (347)
T ss_pred             CEEEECcccCChH----H----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccc
Confidence            9999999864321    0    1122346689999999988887753    22 589999996433210           


Q ss_pred             -------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh
Q 040531          163 -------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR  235 (285)
Q Consensus       163 -------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                             .+...|+.+|.+.+.+++.++.+   +++.+..+.|+.+..|..........      .........+.....
T Consensus       137 ~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~------~~~~~i~~~~~~~~~  207 (347)
T PRK11908        137 LVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKE------GSSRVVTQFLGHIVR  207 (347)
T ss_pred             cccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCcccc------CCcchHHHHHHHHhC
Confidence                   01236999999999999988765   46888889998887765321110000      000001112222211


Q ss_pred             hhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          236 GLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       236 ~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +..       .....++..+|++++++.++........|+.+++.++
T Consensus       208 ~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        208 GEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            110       1122468999999999998865432245889999775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.66  E-value=7.7e-15  Score=141.40  Aligned_cols=230  Identities=16%  Similarity=0.151  Sum_probs=150.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHH-HHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD-IQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~i~~~~   90 (285)
                      -+++++|||||+|.||++++++|+++ |++|+.++|+........     ...++.++.+|++|.++ ++++++      
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-----~~~~~~~~~gDl~d~~~~l~~~l~------  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-----GHPRFHFVEGDISIHSEWIEYHIK------  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-----CCCceEEEeccccCcHHHHHHHhc------
Confidence            36889999999999999999999986 799999998775432211     12468889999998654 333332      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC---C-----
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---G-----  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~---~-----  162 (285)
                       .+|+|||.|+.....    .    ..++..+.+++|+.+...+++++...    + .++|++||...+..   .     
T Consensus       382 -~~D~ViHlAa~~~~~----~----~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~  447 (660)
T PRK08125        382 -KCDVVLPLVAIATPI----E----YTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDED  447 (660)
T ss_pred             -CCCEEEECccccCch----h----hccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCcc
Confidence             599999999875321    0    11223457899999999999987652    2 47999999643211   0     


Q ss_pred             -------C---CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH
Q 040531          163 -------L---GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE  232 (285)
Q Consensus       163 -------~---~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                             |   +...|+.||.+.+.+++.++.+   +++++..+.|+.+..|..........      .........+..
T Consensus       448 ~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~------~~~~~i~~~i~~  518 (660)
T PRK08125        448 TSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARI------GSSRAITQLILN  518 (660)
T ss_pred             ccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccc------cccchHHHHHHH
Confidence                   1   1236999999999999988765   47899999999998875321100000      000001111111


Q ss_pred             HHhhhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          233 LVRGLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       233 ~~~~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ...+..       .....++..+|++++++.++........|+.+++-+|.
T Consensus       519 ~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        519 LVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             hcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            111100       01123678999999998888653323468889988774

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.65  E-value=2.3e-14  Score=138.58  Aligned_cols=229  Identities=17%  Similarity=0.108  Sum_probs=151.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+++|++|||||+|.||++++++|+++  +++|+.++|..  +....+.. . ....++.++.+|++|.+.+..++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~-~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-S-KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-c-ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            467899999999999999999999988  68898888753  22211111 0 1234688999999998877665432  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------  161 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------  161 (285)
                         ..+|+|||+|+.....        ...++....+++|+.++..+++++...   ....++|++||...+..      
T Consensus        79 ---~~~D~ViHlAa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~  144 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAD  144 (668)
T ss_pred             ---cCCCEEEECCCccCch--------hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccc
Confidence               3699999999875321        112233567899999999999887442   12468999999643211      


Q ss_pred             --------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          162 --------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       162 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                              ..+...|+.+|.+.+.+++.++.+   +++.+..+.|+.|..|.....              ......+...
T Consensus       145 ~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~--------------~~i~~~~~~a  207 (668)
T PLN02260        145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--------------KLIPKFILLA  207 (668)
T ss_pred             cCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcc--------------cHHHHHHHHH
Confidence                    112457999999999999988775   468899999999987642110              0000111111


Q ss_pred             Hhhhhcc-------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          234 VRGLANL-------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       234 ~~~~~~~-------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..+...+       ...++..+|+|+++..++...   ..|+.+++-++...
T Consensus       208 ~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        208 MQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             hCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence            1110000       112467999999998887543   24678888776543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=1.3e-14  Score=131.38  Aligned_cols=219  Identities=12%  Similarity=0.102  Sum_probs=142.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHH--HHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA--LADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++++||||+|+||++++++|+++|+.|++++|+......  ..+.+.....++.++++|++|.+++..+++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            467899999999999999999999999999999998765321  11112122346889999999999998887643   1


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      ..+|+||||++....     .    .    .+.+++|+.+...+++++.    +.+.+++|++||.....   +...|..
T Consensus       135 ~~~D~Vi~~aa~~~~-----~----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~---p~~~~~~  194 (390)
T PLN02657        135 DPVDVVVSCLASRTG-----G----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK---PLLEFQR  194 (390)
T ss_pred             CCCcEEEECCccCCC-----C----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC---cchHHHH
Confidence            269999999874311     0    0    1235678888877777764    34457899999986543   2446888


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|...+...+.     ...+++...+.|+.+..++.... ..    .....+.        ........+....+..+|+
T Consensus       195 sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~-~~----~~~g~~~--------~~~GdG~~~~~~~I~v~Dl  256 (390)
T PLN02657        195 AKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQV-EI----VKDGGPY--------VMFGDGKLCACKPISEADL  256 (390)
T ss_pred             HHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHH-Hh----hccCCce--------EEecCCcccccCceeHHHH
Confidence            99988877654     23579999999987764332110 00    0000000        0000000001123678899


Q ss_pred             HHHHHHHhcCCCCcccccEEEecC
Q 040531          251 AEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      |+.+..++.+..  ..|+.+++-|
T Consensus       257 A~~i~~~~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        257 ASFIADCVLDES--KINKVLPIGG  278 (390)
T ss_pred             HHHHHHHHhCcc--ccCCEEEcCC
Confidence            998888875432  3578888866

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.65  E-value=1.8e-14  Score=126.48  Aligned_cols=216  Identities=21%  Similarity=0.185  Sum_probs=148.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc-cEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL-DIL   96 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i-d~l   96 (285)
                      +|||||+|.||++++++|.++|++|+.++|.........       ..+.++.+|+++.+....+++       .. |.+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~v   68 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDAV   68 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCEE
Confidence            999999999999999999999999999999776643322       357889999999855555444       23 999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CCC
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LGP  165 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~~  165 (285)
                      ||+|+......     . ... .....+++|+.++..+++++..    .+..++|+.||.+...+.           +..
T Consensus        69 ih~aa~~~~~~-----~-~~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~  137 (314)
T COG0451          69 IHLAAQSSVPD-----S-NAS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPR  137 (314)
T ss_pred             EEccccCchhh-----h-hhh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCC
Confidence            99999764310     0 011 3456899999999999999866    456788986665433321           111


Q ss_pred             c--cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh-ccc-
Q 040531          166 H--AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA-NLK-  241 (285)
Q Consensus       166 ~--~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  241 (285)
                      +  .|+.+|.+.+.+++..+.   .+++.+..+.|+.+..|.....+..           ......+........ ... 
T Consensus       138 p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  203 (314)
T COG0451         138 PLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSS-----------GVVSAFIRQLLKGEPIIVIG  203 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCc-----------CcHHHHHHHHHhCCCcceEe
Confidence            2  499999999999999888   4679999999998887765432111           001111111222211 011 


Q ss_pred             ------CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          242 ------GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       242 ------~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                            ..++..+|+++++..++......    .+++.++.
T Consensus       204 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         204 GDGSQTRDFVYVDDVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             CCCceeEeeEeHHHHHHHHHHHHhCCCCc----EEEeCCCC
Confidence                  12466899999999999765432    77777663

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=1.2e-14  Score=122.44  Aligned_cols=157  Identities=18%  Similarity=0.149  Sum_probs=122.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|=||.+++.+|++.|++|+++|.-.....+.....     ...+++.|+.|.+.+++++++-     +||.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~-----~ida   70 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEEN-----KIDA   70 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhc-----CCCE
Confidence            47999999999999999999999999999997666655554432     1688999999999988887653     7999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------------  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------------  163 (285)
                      |||.||....        ..+.+.-.+.++.|+.|++.|++++...    +..+|||-||. +.++.|            
T Consensus        71 ViHFAa~~~V--------gESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vFSStA-avYG~p~~~PI~E~~~~~  137 (329)
T COG1087          71 VVHFAASISV--------GESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIFSSTA-AVYGEPTTSPISETSPLA  137 (329)
T ss_pred             EEECcccccc--------chhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEEecch-hhcCCCCCcccCCCCCCC
Confidence            9999997533        3466667788999999999999987553    34557766664 444433            


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISP  198 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~p  198 (285)
                      +..+|+.||.+.+.+.+.+++-.   +.++.+++-
T Consensus       138 p~NPYG~sKlm~E~iL~d~~~a~---~~~~v~LRY  169 (329)
T COG1087         138 PINPYGRSKLMSEEILRDAAKAN---PFKVVILRY  169 (329)
T ss_pred             CCCcchhHHHHHHHHHHHHHHhC---CCcEEEEEe
Confidence            45689999999999999998864   455555543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.64  E-value=3e-14  Score=128.29  Aligned_cols=224  Identities=13%  Similarity=0.075  Sum_probs=146.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++|++|||||+|.||++++++|.++|++|++++|......   .   .....+.++.+|+++.+.+..+++       .+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~---~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   86 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---S---EDMFCHEFHLVDLRVMENCLKVTK-------GV   86 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---c---cccccceEEECCCCCHHHHHHHHh-------CC
Confidence            7889999999999999999999999999999998643211   0   111125678899999887666543       58


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-------------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-------------  160 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-------------  160 (285)
                      |+|||.|+.....    ....   ......+..|+.++..+++++..    .+..++|++||...+.             
T Consensus        87 D~Vih~Aa~~~~~----~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E  155 (370)
T PLN02695         87 DHVFNLAADMGGM----GFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKE  155 (370)
T ss_pred             CEEEEcccccCCc----cccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCc
Confidence            9999999864321    1111   11234567899999999888743    3346899999964221             


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh-
Q 040531          161 ----GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-  235 (285)
Q Consensus       161 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  235 (285)
                          +..+...|+.+|.+.+.+++.++..   +++++..+.|+.+..|........        .  ............ 
T Consensus       156 ~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~--------~--~~~~~~~~~~~~~  222 (370)
T PLN02695        156 SDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGR--------E--KAPAAFCRKALTS  222 (370)
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccc--------c--ccHHHHHHHHHcC
Confidence                1223458999999999999987765   479999999999988742100000        0  000001111111 


Q ss_pred             --hhh-----cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          236 --GLA-----NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       236 --~~~-----~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        .+.     .....++..+|++++++.++...    .++.+++-+|...
T Consensus       223 ~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~  268 (370)
T PLN02695        223 TDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  268 (370)
T ss_pred             CCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCce
Confidence              000     01122578899999998877543    2567888776554

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.64  E-value=1.9e-14  Score=126.37  Aligned_cols=219  Identities=17%  Similarity=0.187  Sum_probs=139.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH--HcCCccE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS--KHGRLDI   95 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~--~~~~id~   95 (285)
                      +|||||+|.||++++++|++.|+.++++.|+.......          .....+|+.|..+.+.+++.+.+  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999766665554332111          11234677776666666655442  3457999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~  164 (285)
                      |||+|+....    .   ..+.   ...++.|+.++..+++++..    .+ .++|++||...+..           ..+
T Consensus        72 Vih~A~~~~~----~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p  136 (308)
T PRK11150         72 IFHEGACSST----T---EWDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKP  136 (308)
T ss_pred             EEECceecCC----c---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCC
Confidence            9999986432    1   1122   34689999999999998754    22 36999999754321           113


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh------
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA------  238 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  238 (285)
                      ...|+.+|.+.+.+++.++.+   +++.+..+.|+.+..|......          ..............++..      
T Consensus       137 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~g  203 (308)
T PRK11150        137 LNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKG----------SMASVAFHLNNQLNNGENPKLFEG  203 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCC----------ccchhHHHHHHHHhcCCCCEEecC
Confidence            457999999999999887654   4689999999988886432100          000000001111111100      


Q ss_pred             --cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 --NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 --~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        .....++..+|++++++.++...    .|..+++-+|...
T Consensus       204 ~~~~~r~~i~v~D~a~a~~~~~~~~----~~~~yni~~~~~~  241 (308)
T PRK11150        204 SENFKRDFVYVGDVAAVNLWFWENG----VSGIFNCGTGRAE  241 (308)
T ss_pred             CCceeeeeeeHHHHHHHHHHHHhcC----CCCeEEcCCCCce
Confidence              01123578999999988887543    2458888777654

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.60  E-value=8.2e-14  Score=127.88  Aligned_cols=219  Identities=16%  Similarity=0.062  Sum_probs=141.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++++|||||+|.||++++++|+++|++|++++|......+..... ....++.++..|+.+..     +       ..+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~-~~~~~~~~i~~D~~~~~-----l-------~~~  184 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH-FSNPNFELIRHDVVEPI-----L-------LEV  184 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh-ccCCceEEEECCccChh-----h-------cCC
Confidence            6789999999999999999999999999999987543222111111 11346788889987642     1       258


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------------  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------------  161 (285)
                      |+|||.|+.....     .   ..++..+.+++|+.++..+++++...    + .++|++||...+..            
T Consensus       185 D~ViHlAa~~~~~-----~---~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~  251 (442)
T PLN02206        185 DQIYHLACPASPV-----H---YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQVETYWG  251 (442)
T ss_pred             CEEEEeeeecchh-----h---hhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCCccccc
Confidence            9999999864321     0   11124568899999999999987542    2 37999999754321            


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          162 ----GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       162 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                          ......|+.+|.+.+.+++.+...   +++++..+.|+.+..|.......            ......+.....+.
T Consensus       252 ~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~------------~~v~~~i~~~l~~~  316 (442)
T PLN02206        252 NVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDG------------RVVSNFVAQALRKE  316 (442)
T ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccc------------chHHHHHHHHHcCC
Confidence                112357999999999999887665   46888899998887764210000            00111112222111


Q ss_pred             hcc-------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          238 ANL-------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       238 ~~~-------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ...       ...++.++|++++++.++...    .+..+++-+|..
T Consensus       317 ~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~  359 (442)
T PLN02206        317 PLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGE  359 (442)
T ss_pred             CcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCc
Confidence            101       112567899999998887543    234688766654

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.60  E-value=9.8e-14  Score=121.94  Aligned_cols=221  Identities=14%  Similarity=0.124  Sum_probs=140.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      +|||||+|.||++++++|.++|+ .|++++|..... ... .+   .  ...+..|+++.+.++.+.+.   .+..+|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~---~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL---A--DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh---h--heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            68999999999999999999998 688887654321 111 11   1  13466788887766655442   34579999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCCC
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLGP  165 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~~  165 (285)
                      ||+|+....          +.++....+++|+.++..+++++...    + .++|++||...+..           ..+.
T Consensus        71 vh~A~~~~~----------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~  135 (314)
T TIGR02197        71 FHQGACSDT----------TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPL  135 (314)
T ss_pred             EECccccCc----------cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCC
Confidence            999986321          22345678899999999999987542    2 47999999654321           1145


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc------
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN------  239 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  239 (285)
                      ..|+.+|.+.+.+++....+. ..++++..+.|+.+..+...... .         ........+.....+...      
T Consensus       136 ~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~  204 (314)
T TIGR02197       136 NVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKG-K---------MASVAFHLFNQIKAGGNVKLFKSS  204 (314)
T ss_pred             CHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCC-C---------cccHHHHHHHHHhcCCCeEEecCc
Confidence            679999999999998643321 12478888899888776421100 0         000000111111111000      


Q ss_pred             -------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          240 -------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       240 -------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                             ....++..+|+++++..++..    ..+..+++-++...
T Consensus       205 ~~~~~g~~~~~~i~v~D~a~~i~~~~~~----~~~~~yni~~~~~~  246 (314)
T TIGR02197       205 EGFKDGEQLRDFVYVKDVVDVNLWLLEN----GVSGIFNLGTGRAR  246 (314)
T ss_pred             cccCCCCceeeeEEHHHHHHHHHHHHhc----ccCceEEcCCCCCc
Confidence                   012357789999999988865    24568888777554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.58  E-value=2.3e-13  Score=118.10  Aligned_cols=142  Identities=15%  Similarity=0.133  Sum_probs=109.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      +|||||+|.||++++++|+++|++|++++|+                     .+|+.+.+++.++++..     .+|+||
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~vi   55 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAVV   55 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence            7999999999999999999999999999874                     47999999988887642     589999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCCCc
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLGPH  166 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~~~  166 (285)
                      |+|+.....        .........+++|+.++..+++++...    + .++|++||...+.+           ..+..
T Consensus        56 ~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~  122 (287)
T TIGR01214        56 NTAAYTDVD--------GAESDPEKAFAVNALAPQNLARAAARH----G-ARLVHISTDYVFDGEGKRPYREDDATNPLN  122 (287)
T ss_pred             ECCcccccc--------ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcc
Confidence            999864221        112234567899999999999987542    2 37999998643211           11245


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                      .|+.+|.+.+.+++.+       +.++..++|+.+..+.
T Consensus       123 ~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       123 VYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             hhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence            7999999999888765       3578899999998765

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.58  E-value=1.3e-13  Score=120.72  Aligned_cols=211  Identities=15%  Similarity=0.118  Sum_probs=137.0

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEEE
Q 040531           19 IVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFN   98 (285)
Q Consensus        19 lItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~   98 (285)
                      |||||+|.||++++++|++.|+.|+++.++                    ..+|+++.++++++++.     ..+|+|||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~-----~~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK-----EKPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc-----cCCCEEEE
Confidence            699999999999999999999988766432                    14899999988887664     25899999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-------------C--
Q 040531           99 NAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-------------L--  163 (285)
Q Consensus        99 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-------------~--  163 (285)
                      +|+.....     .  ...+...+.+++|+.++..+++++..    .+..++|++||...+.+.             +  
T Consensus        56 ~A~~~~~~-----~--~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~  124 (306)
T PLN02725         56 AAAKVGGI-----H--ANMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPE  124 (306)
T ss_pred             eeeeeccc-----c--hhhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCC
Confidence            99874210     0  01112345688999999999998854    234689999996432210             1  


Q ss_pred             -CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH-HHHHhhh----
Q 040531          164 -GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM-EELVRGL----  237 (285)
Q Consensus       164 -~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----  237 (285)
                       ....|+.+|.+.+.+++.+.++   +++++..+.|+.+..+..... ..     . .......-..+ .......    
T Consensus       125 p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~-~~-----~-~~~~~~~i~~~~~~~~~~~~~~~  194 (306)
T PLN02725        125 PTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPHDNFH-PE-----N-SHVIPALIRRFHEAKANGAPEVV  194 (306)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCC-CC-----C-CcccHHHHHHHHHHhhcCCCeEE
Confidence             1124999999999999888765   368999999999988752110 00     0 00000000111 0011110    


Q ss_pred             ----hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          238 ----ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       238 ----~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                          ......++.++|++++++.++....   .++.+++.+|...
T Consensus       195 ~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~  236 (306)
T PLN02725        195 VWGSGSPLREFLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEV  236 (306)
T ss_pred             EcCCCCeeeccccHHHHHHHHHHHHhccc---cCcceEeCCCCcc
Confidence                0112246889999999999886532   3455688777654

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.58  E-value=1.8e-13  Score=120.79  Aligned_cols=208  Identities=14%  Similarity=0.073  Sum_probs=137.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      +++||||+|.||++++++|+++|++|++++|+.+......      ...+.++.+|++|.+++.++++       .+|+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~------~~~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK------EWGAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh------hcCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            6999999999999999999999999999999865432221      1357889999999988877664       58999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV  176 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~  176 (285)
                      ||+++....          +   .....++|+.+...+++++..    .+-.++|++||.++..  .+...|..+|...+
T Consensus        69 i~~~~~~~~----------~---~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e  129 (317)
T CHL00194         69 IDASTSRPS----------D---LYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ--YPYIPLMKLKSDIE  129 (317)
T ss_pred             EECCCCCCC----------C---ccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc--cCCChHHHHHHHHH
Confidence            998753210          1   123566788888888887754    3445899999865421  12346888898887


Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHH
Q 040531          177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALY  256 (285)
Q Consensus       177 ~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~  256 (285)
                      .+.+.       .++....+.|+.+...+.......   ... ..+         .+... .......+..+|+|+++..
T Consensus       130 ~~l~~-------~~l~~tilRp~~~~~~~~~~~~~~---~~~-~~~---------~~~~~-~~~~~~~i~v~Dva~~~~~  188 (317)
T CHL00194        130 QKLKK-------SGIPYTIFRLAGFFQGLISQYAIP---ILE-KQP---------IWITN-ESTPISYIDTQDAAKFCLK  188 (317)
T ss_pred             HHHHH-------cCCCeEEEeecHHhhhhhhhhhhh---hcc-CCc---------eEecC-CCCccCccCHHHHHHHHHH
Confidence            76542       468888899986543322111000   000 000         00000 0011234678999999998


Q ss_pred             HhcCCCCcccccEEEecCCcccc
Q 040531          257 LASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       257 l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++....  ..|+.+++-|+-..+
T Consensus       189 ~l~~~~--~~~~~~ni~g~~~~s  209 (317)
T CHL00194        189 SLSLPE--TKNKTFPLVGPKSWN  209 (317)
T ss_pred             HhcCcc--ccCcEEEecCCCccC
Confidence            886533  258899998876543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.55  E-value=6.8e-13  Score=121.60  Aligned_cols=220  Identities=15%  Similarity=0.079  Sum_probs=141.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +.++++||||+|.||++++++|+++|++|++++|...........+. ...++.++..|+.+..     +       ..+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c-------cCC
Confidence            45689999999999999999999999999999976432222111111 1245778888986542     1       258


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------------  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------------  161 (285)
                      |+|||+|+.....    .    ...+-.+.+++|+.++..++.++...    + .++|++||...+..            
T Consensus       186 D~ViHlAa~~~~~----~----~~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~  252 (436)
T PLN02166        186 DQIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWG  252 (436)
T ss_pred             CEEEECceeccch----h----hccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccc
Confidence            9999999864321    0    01123577999999999999887553    2 37999998653211            


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          162 ----GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       162 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                          ......|+.+|.+.+.+++.+.+.   .++.+..+.|+.+..|.......            ......+.....+.
T Consensus       253 ~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~------------~~i~~~i~~~l~~~  317 (436)
T PLN02166        253 NVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDG------------RVVSNFVAQTIRKQ  317 (436)
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCcc------------chHHHHHHHHhcCC
Confidence                112356999999999999988665   46888889998888764210000            00111111111111


Q ss_pred             hc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          238 AN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       238 ~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..       ....++..+|+++++..++...    .+..+++-+|...
T Consensus       318 ~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~----~~giyNIgs~~~~  361 (436)
T PLN02166        318 PMTVYGDGKQTRSFQYVSDLVDGLVALMEGE----HVGPFNLGNPGEF  361 (436)
T ss_pred             CcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC----CCceEEeCCCCcE
Confidence            10       1123578899999998887532    2347887666543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.50  E-value=4.2e-12  Score=122.71  Aligned_cols=225  Identities=16%  Similarity=0.079  Sum_probs=140.5

Q ss_pred             EEEEecCCCchhHHHHHHHH--HCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHH--HHHHHHHHHHcC
Q 040531           17 IAIVTGGARGIGEATVRLFV--KHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDI--QNLINVTISKHG   91 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la--~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i--~~~~~~i~~~~~   91 (285)
                      ++|||||+|.||++++++|+  +.|+.|++++|+... ......... ...++.++.+|+++.+..  ...++.+    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  589999999996543 222111111 125689999999985310  1111222    4


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC---------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG---------  162 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~---------  162 (285)
                      .+|+|||+|+.....        .+   ..+..++|+.+...+++++..    .+..++|++||.......         
T Consensus        77 ~~D~Vih~Aa~~~~~--------~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~  141 (657)
T PRK07201         77 DIDHVVHLAAIYDLT--------AD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDF  141 (657)
T ss_pred             CCCEEEECceeecCC--------CC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccc
Confidence            799999999964221        11   345678999999988887644    335689999987543211         


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchH-HHHHHHHHHh--
Q 040531          163 ----LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEE-EEEKMEELVR--  235 (285)
Q Consensus       163 ----~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--  235 (285)
                          .....|+.+|.+.+.+++.      ..++++..+.|+.|..+........        ..... ....+.....  
T Consensus       142 ~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~--------~~~~~~~~~~~~~~~~~~  207 (657)
T PRK07201        142 DEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDK--------IDGPYYFFKVLAKLAKLP  207 (657)
T ss_pred             hhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCcccc--------CCcHHHHHHHHHHhccCC
Confidence                1235699999999998863      2478999999999987532110000        00000 0001111100  


Q ss_pred             -hhhc-----ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          236 -GLAN-----LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       236 -~~~~-----~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                       ....     ....++..+++++++..++...  ...|+.+++-++-.
T Consensus       208 ~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~  253 (657)
T PRK07201        208 SWLPMVGPDGGRTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKP  253 (657)
T ss_pred             cccccccCCCCeeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCC
Confidence             0000     0012456899999999988643  34788898876644

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.49  E-value=1.5e-11  Score=105.52  Aligned_cols=185  Identities=12%  Similarity=0.078  Sum_probs=148.9

Q ss_pred             CCcEEEEecC-CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC-
Q 040531           14 EGKIAIVTGG-ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG-   91 (285)
Q Consensus        14 ~~k~vlItGa-s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~-   91 (285)
                      +..+|||.|. ..-|+|.+|..|-++|+-|+++..+.++.+...++-   ...+.....|..+..++...+.++.+... 
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            3568999994 799999999999999999999998887755444332   45588888899888777777777665443 


Q ss_pred             -------------CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC--CCceEEEEc-c
Q 040531           92 -------------RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR--RSGCIISTA-S  155 (285)
Q Consensus        92 -------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~ii~vs-s  155 (285)
                                   .+..||.......   ..+|++.++.+.|.+.++.|+..++.++|.++|.++.+  .+.+||++. |
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~y---p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Ps  155 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSY---PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPS  155 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCC---CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCc
Confidence                         3455665544332   33789999999999999999999999999999999872  355665555 5


Q ss_pred             cccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          156 VASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      ..+....|..+.-.....++.++++.|.+|+.+++|.|..++.|.++-.
T Consensus       156 i~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  156 ISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            6666777888888999999999999999999999999999999988765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.49  E-value=2.3e-11  Score=93.51  Aligned_cols=217  Identities=22%  Similarity=0.214  Sum_probs=150.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc--C
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH--G   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~--~   91 (285)
                      +-..|+|-||-+.+|.+|+..|-.+++-|.-+|..+.+-          ...-..+..|-+=.|+-+.+++++-+..  .
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----------ccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            456789999999999999999999999998887543321          1112344455555566677777776654  3


Q ss_pred             CccEEEECCCCCCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           92 RLDILFNNAGVLGNQSKH-KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      ++|.++|-||.+..+... +.+    ....+-++.-.+.....-.+.+..++  +.+|-+-..+...+..+.|+...|+.
T Consensus        72 kvDav~CVAGGWAGGnAksKdl----~KNaDLMwKQSvwtSaIsa~lAt~HL--K~GGLL~LtGAkaAl~gTPgMIGYGM  145 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDL----VKNADLMWKQSVWTSAISAKLATTHL--KPGGLLQLTGAKAALGGTPGMIGYGM  145 (236)
T ss_pred             ccceEEEeeccccCCCcchhhh----hhchhhHHHHHHHHHHHHHHHHHhcc--CCCceeeecccccccCCCCcccchhH
Confidence            799999999876543211 111    11122244444444444444444444  44677777777788889999999999


Q ss_pred             hHHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          171 SKHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +|+|++.++++|+.+-.  +.|--+..|.|=..+|||.++..+.                          .........+
T Consensus       146 AKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~--------------------------ADfssWTPL~  199 (236)
T KOG4022|consen  146 AKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPN--------------------------ADFSSWTPLS  199 (236)
T ss_pred             HHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCC--------------------------CcccCcccHH
Confidence            99999999999998743  3577888999999999999987654                          2234455667


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEe
Q 040531          249 DIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      ++++..+.-..+.++.-+|..|.+
T Consensus       200 fi~e~flkWtt~~~RPssGsLlqi  223 (236)
T KOG4022|consen  200 FISEHFLKWTTETSRPSSGSLLQI  223 (236)
T ss_pred             HHHHHHHHHhccCCCCCCCceEEE
Confidence            788877776666666667777654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.48  E-value=6.1e-13  Score=116.43  Aligned_cols=145  Identities=14%  Similarity=0.104  Sum_probs=105.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|.||++++++|+++| .|+.++|...                 .+..|++|.+.+.++++..     ++|+|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999 7888887531                 2457999999988877632     58999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCCC
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLGP  165 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~~  165 (285)
                      ||+|+.....        ...++-...+++|+.++..+++++...     +.++|++||...+.+           ..+.
T Consensus        59 ih~Aa~~~~~--------~~~~~~~~~~~~N~~~~~~l~~aa~~~-----g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~  125 (299)
T PRK09987         59 VNAAAHTAVD--------KAESEPEFAQLLNATSVEAIAKAANEV-----GAWVVHYSTDYVFPGTGDIPWQETDATAPL  125 (299)
T ss_pred             EECCccCCcc--------hhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEccceEECCCCCCCcCCCCCCCCC
Confidence            9999875321        111223556789999999999987552     247999988543211           1133


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      ..|+.+|.+.+.+++....       ....++|+.+..|
T Consensus       126 ~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        126 NVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             CHHHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            5799999999999876432       2366677777655

>PRK05865 hypothetical protein; Provisional

Probab=99.47  E-value=2.8e-12  Score=124.64  Aligned_cols=186  Identities=15%  Similarity=0.098  Sum_probs=128.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      +++||||+|+||++++++|+++|+.|++++|+....      .   ..++.++.+|++|.+++.++++       .+|+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            699999999999999999999999999999875321      1   1257889999999999887765       58999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV  176 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~  176 (285)
                      ||+|+...      +           .+++|+.++..+++++.    +.+.+++|++||..              |.+.+
T Consensus        66 VHlAa~~~------~-----------~~~vNv~GT~nLLeAa~----~~gvkr~V~iSS~~--------------K~aaE  110 (854)
T PRK05865         66 AHCAWVRG------R-----------NDHINIDGTANVLKAMA----ETGTGRIVFTSSGH--------------QPRVE  110 (854)
T ss_pred             EECCCccc------c-----------hHHHHHHHHHHHHHHHH----HcCCCeEEEECCcH--------------HHHHH
Confidence            99997531      1           36789999988877654    34456899999853              88877


Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc--ccCCCCCHHHHHHHH
Q 040531          177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN--LKGVTLKARDIAEAA  254 (285)
Q Consensus       177 ~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~eeva~~~  254 (285)
                      .+++.       +++.+..+.|+.+..|........                ...........  ....++.++|+++++
T Consensus       111 ~ll~~-------~gl~~vILRp~~VYGP~~~~~i~~----------------ll~~~v~~~G~~~~~~dfIhVdDVA~Ai  167 (854)
T PRK05865        111 QMLAD-------CGLEWVAVRCALIFGRNVDNWVQR----------------LFALPVLPAGYADRVVQVVHSDDAQRLL  167 (854)
T ss_pred             HHHHH-------cCCCEEEEEeceEeCCChHHHHHH----------------HhcCceeccCCCCceEeeeeHHHHHHHH
Confidence            76642       479999999999987642211100                00000000000  011257889999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..++....  ..|..+++-+|...
T Consensus       168 ~~aL~~~~--~~ggvyNIgsg~~~  189 (854)
T PRK05865        168 VRALLDTV--IDSGPVNLAAPGEL  189 (854)
T ss_pred             HHHHhCCC--cCCCeEEEECCCcc
Confidence            88874321  23567887766543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.47  E-value=3.7e-12  Score=103.20  Aligned_cols=173  Identities=14%  Similarity=0.117  Sum_probs=122.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.++        ..++.++++|+.|.+++.++++       ..|++|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            6899999999999999999999999999999887665        5679999999999988877665       699999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC---------ccc
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP---------HAY  168 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~---------~~Y  168 (285)
                      +++|...     .       +             ...++.++..+++.+..+++++|+.+.....+..         ..|
T Consensus        66 ~~~~~~~-----~-------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~  120 (183)
T PF13460_consen   66 HAAGPPP-----K-------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEY  120 (183)
T ss_dssp             ECCHSTT-----T-------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHH
T ss_pred             hhhhhhc-----c-------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhh
Confidence            9987431     1       0             2334455555555667799999998765543331         245


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ...|...+.+.+       +.+++...++|+.+..+........     ..                . .......++.+
T Consensus       121 ~~~~~~~e~~~~-------~~~~~~~ivrp~~~~~~~~~~~~~~-----~~----------------~-~~~~~~~i~~~  171 (183)
T PF13460_consen  121 ARDKREAEEALR-------ESGLNWTIVRPGWIYGNPSRSYRLI-----KE----------------G-GPQGVNFISRE  171 (183)
T ss_dssp             HHHHHHHHHHHH-------HSTSEEEEEEESEEEBTTSSSEEEE-----SS----------------T-STTSHCEEEHH
T ss_pred             HHHHHHHHHHHH-------hcCCCEEEEECcEeEeCCCcceeEE-----ec----------------c-CCCCcCcCCHH
Confidence            666655554442       2479999999999988763311000     00                0 01112357899


Q ss_pred             HHHHHHHHHhc
Q 040531          249 DIAEAALYLAS  259 (285)
Q Consensus       249 eva~~~~~l~s  259 (285)
                      |+|++++.++.
T Consensus       172 DvA~~~~~~l~  182 (183)
T PF13460_consen  172 DVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhC
Confidence            99999998763

...

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.45  E-value=3.7e-12  Score=108.49  Aligned_cols=155  Identities=21%  Similarity=0.255  Sum_probs=117.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH---HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI---ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +++||||||+|-||.+.+.+|.+.|+.|+++|.-.....   ...+++...+.++.+++.|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            679999999999999999999999999999874322222   222233333578999999999999999988764     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC---------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG---------  162 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~---------  162 (285)
                      .+|.|+|-|+.....        .+.+.....++.|+.|++.++..+..    .+-..+|+.||..-. +.         
T Consensus        77 ~fd~V~Hfa~~~~vg--------eS~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssatvY-G~p~~ip~te~  143 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG--------ESMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSATVY-GLPTKVPITEE  143 (343)
T ss_pred             CCceEEeehhhhccc--------hhhhCchhheehhhhhHHHHHHHHHH----cCCceEEEecceeee-cCcceeeccCc
Confidence            599999999875432        24444577889999999998887644    345668888776533 21         


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHhC
Q 040531          163 ----LGPHAYTVSKHAIVGLTKNTACELG  187 (285)
Q Consensus       163 ----~~~~~Y~asKaa~~~l~~~la~e~~  187 (285)
                          .+.+.|+.+|-+++...+....-+.
T Consensus       144 ~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  144 DPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence                1567899999999999999877654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.43  E-value=2.1e-12  Score=113.52  Aligned_cols=174  Identities=19%  Similarity=0.141  Sum_probs=129.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+..++|||||+|.+|++++.+|.+.+  ..+.++|..+.......++......++.++++|+.+..++...++      
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc------
Confidence            357899999999999999999999998  779999887653222223232246779999999999888877765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC---------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---------  161 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~---------  161 (285)
                       .. .+||+|....+        +....+.+..+++|+.|+..++.+...    .+..++|++||..-..+         
T Consensus        76 -~~-~Vvh~aa~~~~--------~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E  141 (361)
T KOG1430|consen   76 -GA-VVVHCAASPVP--------DFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDE  141 (361)
T ss_pred             -Cc-eEEEeccccCc--------cccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCC
Confidence             56 66776654322        223335677899999999888888755    45567999999765432         


Q ss_pred             ---CC--CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh
Q 040531          162 ---GL--GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       162 ---~~--~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~  209 (285)
                         .|  ....|+.||+-.+.+++..+.   ..+....+++|..|+.|--+..
T Consensus       142 ~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~  191 (361)
T KOG1430|consen  142 SLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRL  191 (361)
T ss_pred             CCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccc
Confidence               22  224899999999999988765   3468889999999988765543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.42  E-value=3.7e-12  Score=108.54  Aligned_cols=163  Identities=15%  Similarity=0.161  Sum_probs=98.4

Q ss_pred             EecCCCchhHHHHHHHHHCCC--eEEEEecCchh---hHHHHHHhhc----------CCCceEEEeccCCCHH-HHH-HH
Q 040531           20 VTGGARGIGEATVRLFVKHGA--KVVIADIDDAA---GIALADSLLS----------SSPLVTYLHCDVSLEQ-DIQ-NL   82 (285)
Q Consensus        20 ItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~---~~~~~~~~~~----------~~~~v~~~~~D~s~~~-~i~-~~   82 (285)
                      ||||+|.||..+..+|++.+.  +|+++.|....   .+...+.+.+          ...++.++.+|++++. .+. ..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999887632   2233233221          1568999999999853 111 11


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc--c
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL--M  160 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~--~  160 (285)
                      .+++.+   .+|+|||+|+.....   .        .+.+..++|+.|+..+++.+..    .+..+++++||....  .
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~---~--------~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~  142 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN---A--------PYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSR  142 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS------------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-
T ss_pred             hhcccc---ccceeeecchhhhhc---c--------cchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCC
Confidence            222222   499999999876321   1        2445788999999999888752    233389999993211  1


Q ss_pred             C------------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccc
Q 040531          161 G------------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVAT  203 (285)
Q Consensus       161 ~------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t  203 (285)
                      .                  ......|..||...|.+++..+.+   .|+.+..++||.|..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  143 PGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG  200 (249)
T ss_dssp             TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred             CCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence            1                  012358999999999999998876   468899999998877

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=99.38  E-value=1.8e-11  Score=113.87  Aligned_cols=231  Identities=18%  Similarity=0.131  Sum_probs=143.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCchh---hHHHHHHh---------hcC---------CCceE
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDAA---GIALADSL---------LSS---------SPLVT   67 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~~---~~~~~~~~---------~~~---------~~~v~   67 (285)
                      -++||+++||||+|.||+.++++|++.+.   +|+++.|....   .+.+..++         .+.         ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            47999999999999999999999997643   46777775431   11111111         110         15789


Q ss_pred             EEeccCCC-------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHH
Q 040531           68 YLHCDVSL-------EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAK  140 (285)
Q Consensus        68 ~~~~D~s~-------~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (285)
                      ++.+|+++       .+.++.+++       .+|+|||+|+....       .    +.....+++|+.|+..+++.+..
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-------~----~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-------D----ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-------c----CCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999984       333444433       59999999987521       1    23567899999999999988754


Q ss_pred             hhcCCCCceEEEEcccccccCCC---------------------------------------------------------
Q 040531          141 VMVPRRSGCIISTASVASLMGGL---------------------------------------------------------  163 (285)
Q Consensus       141 ~~~~~~~g~ii~vss~~~~~~~~---------------------------------------------------------  163 (285)
                      .   .+..+++++||........                                                         
T Consensus       150 ~---~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (491)
T PLN02996        150 C---VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMER  226 (491)
T ss_pred             c---CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhH
Confidence            2   1234789988865431100                                                         


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          164 -----GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       164 -----~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                           ....|+.||++.+.+++..+     .++.+..++|+.|..+.... .+.    |-....  .....+.....+..
T Consensus       227 ~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p-~~g----wi~~~~--~~~~i~~~~~~g~~  294 (491)
T PLN02996        227 AKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEP-FPG----WIEGLR--TIDSVIVGYGKGKL  294 (491)
T ss_pred             HHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCC-CCC----cccchh--hHHHHHHHhccceE
Confidence                 12359999999999997642     27999999999998865321 110    000000  00011111111111


Q ss_pred             -------cccCCCCCHHHHHHHHHHHhcCCC-CcccccEEEecCC
Q 040531          239 -------NLKGVTLKARDIAEAALYLASDES-KYISGHNLVVDGG  275 (285)
Q Consensus       239 -------~~~~~~~~~eeva~~~~~l~s~~~-~~~~G~~i~vdgG  275 (285)
                             .....++.+++++++++.++.... ..-.++++++-+|
T Consensus       295 ~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        295 TCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             eEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence                   011235778899999887775421 1124678888877

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.5e-10  Score=93.21  Aligned_cols=172  Identities=13%  Similarity=0.072  Sum_probs=116.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++++||||+ |+|.+++++|+++|++|++++|+.+..+.+...+.. ..++.++++|++|.+++.++++.+.++++++|+
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            468999998 777789999999999999999998876666554532 457888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      +|+.+-..                          ++-.+..++...-.+.+.-+++++-...+..+              
T Consensus        79 lv~~vh~~--------------------------~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~--------------  118 (177)
T PRK08309         79 AVAWIHSS--------------------------AKDALSVVCRELDGSSETYRLFHVLGSAASDP--------------  118 (177)
T ss_pred             EEEecccc--------------------------chhhHHHHHHHHccCCCCceEEEEeCCcCCch--------------
Confidence            99865432                          22233444433332333446776654433111              


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                          +..+..+....+.-.-|..|++-.+-                                   ..|..+-+||++.++
T Consensus       119 ----~~~~~~~~~~~~~~~~i~lgf~~~~~-----------------------------------~~rwlt~~ei~~gv~  159 (177)
T PRK08309        119 ----RIPSEKIGPARCSYRRVILGFVLEDT-----------------------------------YSRWLTHEEISDGVI  159 (177)
T ss_pred             ----hhhhhhhhhcCCceEEEEEeEEEeCC-----------------------------------ccccCchHHHHHHHH
Confidence                11122233345666777788775532                                   235668899999888


Q ss_pred             HHhcC-CCCccccc
Q 040531          256 YLASD-ESKYISGH  268 (285)
Q Consensus       256 ~l~s~-~~~~~~G~  268 (285)
                      ...+. ...++.|+
T Consensus       160 ~~~~~~~~~~~~g~  173 (177)
T PRK08309        160 KAIESDADEHVVGT  173 (177)
T ss_pred             HHHhcCCCeEEEEE
Confidence            87744 45555554

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.32  E-value=5.8e-12  Score=109.48  Aligned_cols=198  Identities=16%  Similarity=0.105  Sum_probs=123.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|-||.++.++|.++|+.|+.++|+                     .+|++|.+++.+++++.     ++|+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            479999999999999999999999999998776                     68999999999888765     6999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~  164 (285)
                      |||+|++...        +.-.++-+..+.+|+.++..+.+.+..     .+.++|++||..-+.+.           .+
T Consensus        55 Vin~aa~~~~--------~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P  121 (286)
T PF04321_consen   55 VINCAAYTNV--------DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNP  121 (286)
T ss_dssp             EEE------H--------HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----
T ss_pred             EeccceeecH--------HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCC
Confidence            9999987421        112334567899999999999998754     34689999997544322           13


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh-----hhc
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-----LAN  239 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  239 (285)
                      ...|+-+|...+..++..    .+   ....++++++..+-..++.                .........+     ...
T Consensus       122 ~~~YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g~~~~~~~----------------~~~~~~~~~~~~i~~~~d  178 (286)
T PF04321_consen  122 LNVYGRSKLEGEQAVRAA----CP---NALILRTSWVYGPSGRNFL----------------RWLLRRLRQGEPIKLFDD  178 (286)
T ss_dssp             SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHH----------------HHHHHHHHCTSEEEEESS
T ss_pred             CCHHHHHHHHHHHHHHHh----cC---CEEEEecceecccCCCchh----------------hhHHHHHhcCCeeEeeCC
Confidence            568999999999998872    12   4566777777766211111                1111222111     111


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCC-cccccEEEecCC
Q 040531          240 LKGVTLKARDIAEAALYLASDESK-YISGHNLVVDGG  275 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~-~~~G~~i~vdgG  275 (285)
                      .....+..+++|+.+..|+..... .-...++++.|.
T Consensus       179 ~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~  215 (286)
T PF04321_consen  179 QYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP  215 (286)
T ss_dssp             CEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B
T ss_pred             ceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecC
Confidence            122346788999999999866421 112345555444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.32  E-value=6.8e-11  Score=100.59  Aligned_cols=182  Identities=20%  Similarity=0.158  Sum_probs=127.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      +||||++|-+|.++++.|. .+..|+.++|.+                     +|++|.+.+.+++++.     ++|+||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            8999999999999999998 668899888754                     7999999999998865     799999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CCCc
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LGPH  166 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~~~  166 (285)
                      |+|++...        +.-..+-+..+.+|..++.++.+++..     -+.++|++|+-.-+-+.           -+..
T Consensus        56 n~AAyt~v--------D~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~n  122 (281)
T COG1091          56 NAAAYTAV--------DKAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLN  122 (281)
T ss_pred             ECcccccc--------ccccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChh
Confidence            99998643        123334577899999999999998744     35679999985543221           1456


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh-----hhhccc
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-----GLANLK  241 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  241 (285)
                      .|+.||.+-+..++...    +   +...+...++.....+++..                ..++....     -+....
T Consensus       123 vYG~sKl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~nFv~----------------tml~la~~~~~l~vv~Dq~  179 (281)
T COG1091         123 VYGRSKLAGEEAVRAAG----P---RHLILRTSWVYGEYGNNFVK----------------TMLRLAKEGKELKVVDDQY  179 (281)
T ss_pred             hhhHHHHHHHHHHHHhC----C---CEEEEEeeeeecCCCCCHHH----------------HHHHHhhcCCceEEECCee
Confidence            89999999999998753    2   22344444554433222110                11111111     112223


Q ss_pred             CCCCCHHHHHHHHHHHhcCCC
Q 040531          242 GVTLKARDIAEAALYLASDES  262 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~  262 (285)
                      +.....+++|+.+..|+....
T Consensus       180 gsPt~~~dlA~~i~~ll~~~~  200 (281)
T COG1091         180 GSPTYTEDLADAILELLEKEK  200 (281)
T ss_pred             eCCccHHHHHHHHHHHHhccc
Confidence            445678899999999886654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.30  E-value=6.6e-11  Score=109.42  Aligned_cols=161  Identities=17%  Similarity=0.202  Sum_probs=117.7

Q ss_pred             CcEEE----EecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           15 GKIAI----VTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        15 ~k~vl----ItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |..+|    |+||++|+|.++++.|...|+.|+.+.+.....                                 .....
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~---------------------------------~~~~~   80 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW---------------------------------AAGWG   80 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc---------------------------------ccCcC
Confidence            45556    888899999999999999999999876543310                                 00001


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      .+++.+|+-+--.           .+.+++.        +.+.+++..++.|.  ..|+||+++|.....   ....|++
T Consensus        81 ~~~~~~~~d~~~~-----------~~~~~l~--------~~~~~~~~~l~~l~--~~griv~i~s~~~~~---~~~~~~~  136 (450)
T PRK08261         81 DRFGALVFDATGI-----------TDPADLK--------ALYEFFHPVLRSLA--PCGRVVVLGRPPEAA---ADPAAAA  136 (450)
T ss_pred             CcccEEEEECCCC-----------CCHHHHH--------HHHHHHHHHHHhcc--CCCEEEEEccccccC---CchHHHH
Confidence            2445444322110           1222222        33466777888874  458999999976643   3346999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+.+++|++++|+ +++++++.|.|+.                                            ..++++
T Consensus       137 akaal~gl~rsla~E~-~~gi~v~~i~~~~--------------------------------------------~~~~~~  171 (450)
T PRK08261        137 AQRALEGFTRSLGKEL-RRGATAQLVYVAP--------------------------------------------GAEAGL  171 (450)
T ss_pred             HHHHHHHHHHHHHHHh-hcCCEEEEEecCC--------------------------------------------CCHHHH
Confidence            9999999999999999 7799999998873                                            156788


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ++.+.|++++.+.|++|+.+.++++..
T Consensus       172 ~~~~~~l~s~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        172 ESTLRFFLSPRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             HHHHHHhcCCccCCccCcEEEecCCcc
Confidence            899999999999999999999999875

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=2.2e-11  Score=101.76  Aligned_cols=170  Identities=16%  Similarity=0.124  Sum_probs=128.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh----hcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL----LSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +|++||||-+|-=|.-+|+.|+++|+.|+.+.|+.+......-.+    .....+++.+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            689999999999999999999999999999988754433221112    123456999999999999999998876    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-----------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-----------  159 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-----------  159 (285)
                       .+|-+.|.|+        .++...+.+......+++..|++.++.++.-+-  ....++..-||..-+           
T Consensus        78 -~PdEIYNLaA--------QS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~  146 (345)
T COG1089          78 -QPDEIYNLAA--------QSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKET  146 (345)
T ss_pred             -Cchhheeccc--------cccccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccC
Confidence             6898998887        445566777778889999999999998875543  224566655554322           


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHh---CCCCcEEEEEeCC
Q 040531          160 MGGLGPHAYTVSKHAIVGLTKNTACEL---GKYGIRVNCISPF  199 (285)
Q Consensus       160 ~~~~~~~~Y~asKaa~~~l~~~la~e~---~~~~i~v~~v~pg  199 (285)
                      .|+.+.++|+++|....-++......+   +..||-+|+=+|.
T Consensus       147 TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             CCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence            134467899999999999988877665   3457777776774

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.26  E-value=1.4e-09  Score=113.41  Aligned_cols=231  Identities=13%  Similarity=0.039  Sum_probs=141.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC----CeEEEEecCchhhHH---HHHHhhc-------CCCceEEEeccCCCHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHG----AKVVIADIDDAAGIA---LADSLLS-------SSPLVTYLHCDVSLEQDI   79 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g----~~v~~~~r~~~~~~~---~~~~~~~-------~~~~v~~~~~D~s~~~~i   79 (285)
                      ..++++||||+|.||.+++++|++++    ++|+.+.|+......   ..+....       ...++.++.+|++++.-.
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999887    778888886443221   1111111       113688999999854210


Q ss_pred             --HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           80 --QNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        80 --~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                        ....+++.   ..+|++||+|+....        ..+   +......|+.++..+++.+..    .+..+++++||.+
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~--------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~ 1111 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHW--------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTS 1111 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecC--------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCee
Confidence              11122221   369999999986521        112   334556899999999988743    2345799999965


Q ss_pred             cccC-----------------CC-----------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh
Q 040531          158 SLMG-----------------GL-----------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       158 ~~~~-----------------~~-----------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~  209 (285)
                      ....                 .+           ....|+.||.+.+.+++..+.    .|+.+..+.||.|..+.....
T Consensus      1112 v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~ 1187 (1389)
T TIGR03443      1112 ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGA 1187 (1389)
T ss_pred             ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCC
Confidence            4311                 00           124599999999999987543    379999999999987632221


Q ss_pred             hcccccccCCCCCchHHHHHHHHHHhhhhcc----cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          210 WKSCEDCMDSGKPCEEEEEKMEELVRGLANL----KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      +..          .......+.........+    ...++.+++++++++.++........+..+++.++.
T Consensus      1188 ~~~----------~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1188 TNT----------DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             CCc----------hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            110          011111111111100011    123567899999999987654322244567776653

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.23  E-value=5.8e-10  Score=97.42  Aligned_cols=165  Identities=18%  Similarity=0.167  Sum_probs=115.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchh---hHHHHHHhh-------cCCCceEEEeccCCCH------HH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAA---GIALADSLL-------SSSPLVTYLHCDVSLE------QD   78 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~---~~~~~~~~~-------~~~~~v~~~~~D~s~~------~~   78 (285)
                      +++++|||+|.+|+.++.+|+.+- ++|++.-|-+..   ...+.+.+.       ....++.++..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999765 588888775442   222222222       1246799999999853      33


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           79 IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      .+.+.+       .+|.||||++....-           ..+.++...|+.|+..+++.+..    .+...+.+|||++.
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-----------~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv  138 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-----------FPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISV  138 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-----------CcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeee
Confidence            334333       699999999876421           12567788999999888876532    22334888888764


Q ss_pred             ccC--------------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          159 LMG--------------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       159 ~~~--------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                      ...                    ......|+-||.+.+.+++....    .|+++..+.||+|-.+-.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         139 GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCc
Confidence            321                    11236799999999999987655    489999999999966544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.22  E-value=7.4e-10  Score=96.13  Aligned_cols=213  Identities=16%  Similarity=0.064  Sum_probs=118.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      +|||||+|.||.+++++|+++|++|++++|+........        ...  ..|+.. ..       ..+....+|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~-------~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LA-------ESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cc-------hhhhcCCCCEEE
Confidence            589999999999999999999999999999876542211        001  112221 11       122345799999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC---CC--------CCc
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---GL--------GPH  166 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~---~~--------~~~  166 (285)
                      |+|+....      ....+.+.....+++|+.++..+++++...-  .+...+++.|+......   .+        +..
T Consensus        63 h~a~~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~  134 (292)
T TIGR01777        63 NLAGEPIA------DKRWTEERKQEIRDSRIDTTRALVEAIAAAE--QKPKVFISASAVGYYGTSEDRVFTEEDSPAGDD  134 (292)
T ss_pred             ECCCCCcc------cccCCHHHHHHHHhcccHHHHHHHHHHHhcC--CCceEEEEeeeEEEeCCCCCCCcCcccCCCCCC
Confidence            99986421      1123445566788999999988888875421  11234554544322110   00        011


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH---hhhhcccCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGV  243 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  243 (285)
                      .|+..+...+...+    .+.+.++.+..++|+.+..+... ....             ....+....   -+.......
T Consensus       135 ~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~-------------~~~~~~~~~~~~~g~~~~~~~  196 (292)
T TIGR01777       135 FLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAK-------------MLPPFRLGLGGPLGSGRQWFS  196 (292)
T ss_pred             hHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHH-------------HHHHHhcCcccccCCCCcccc
Confidence            12222333333322    22345799999999999876311 1000             000000000   000011224


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ++.++|+++++..++....  ..| .+++-++..
T Consensus       197 ~i~v~Dva~~i~~~l~~~~--~~g-~~~~~~~~~  227 (292)
T TIGR01777       197 WIHIEDLVQLILFALENAS--ISG-PVNATAPEP  227 (292)
T ss_pred             cEeHHHHHHHHHHHhcCcc--cCC-ceEecCCCc
Confidence            5789999999999986532  234 566655443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.21  E-value=3.1e-10  Score=99.24  Aligned_cols=129  Identities=19%  Similarity=0.167  Sum_probs=87.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|.||++++++|+++|++|++..                        .|+++.+.+...++.     .++|+
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~-----~~~D~   60 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA-----VKPTH   60 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh-----cCCCE
Confidence            5799999999999999999999999986432                        234555555544432     26899


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---------------  160 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---------------  160 (285)
                      |||+||.....     ..+...++-.+.+++|+.++..+++++...    +. +.+++||.....               
T Consensus        61 ViH~Aa~~~~~-----~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~~~~~~E  130 (298)
T PLN02778         61 VFNAAGVTGRP-----NVDWCESHKVETIRANVVGTLTLADVCRER----GL-VLTNYATGCIFEYDDAHPLGSGIGFKE  130 (298)
T ss_pred             EEECCcccCCC-----CchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEEEecceEeCCCCCCCcccCCCCCc
Confidence            99999975321     011122345678999999999999998653    12 344454422110               


Q ss_pred             ---CCCCCccchhhHHHHHHHHHHHH
Q 040531          161 ---GGLGPHAYTVSKHAIVGLTKNTA  183 (285)
Q Consensus       161 ---~~~~~~~Y~asKaa~~~l~~~la  183 (285)
                         +.+....|+.+|.+.+.+++.++
T Consensus       131 e~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        131 EDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHhh
Confidence               01123579999999999998765

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.20  E-value=5e-10  Score=97.23  Aligned_cols=198  Identities=14%  Similarity=0.103  Sum_probs=118.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC-ccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR-LDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~-id~   95 (285)
                      +++||||+|.||+.++++|++.|++|.++.|+.+...         ...+..+.+|+.|.+++..+++.. +.... +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            3799999999999999999999999999999877531         124556789999999999887542 22334 899


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      ++++++...           ..  ..            ..+.++...++.+-.+||++||.....+.       ..+...
T Consensus        71 v~~~~~~~~-----------~~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~  118 (285)
T TIGR03649        71 VYLVAPPIP-----------DL--AP------------PMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQV  118 (285)
T ss_pred             EEEeCCCCC-----------Ch--hH------------HHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHH
Confidence            999876321           00  00            11223333444556789999986543221       123333


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      +.+.+.      ..++....+.|+++..++.......   .....       ..   ...........+++++|+|+++.
T Consensus       119 ~~~l~~------~~gi~~tilRp~~f~~~~~~~~~~~---~~~~~-------~~---~~~~~g~~~~~~v~~~Dva~~~~  179 (285)
T TIGR03649       119 HAHLDS------LGGVEYTVLRPTWFMENFSEEFHVE---AIRKE-------NK---IYSATGDGKIPFVSADDIARVAY  179 (285)
T ss_pred             HHHHHh------ccCCCEEEEeccHHhhhhccccccc---ccccC-------Ce---EEecCCCCccCcccHHHHHHHHH
Confidence            332221      1378999999998775542211000   00000       00   00000011123689999999999


Q ss_pred             HHhcCCCCcccccEEEecCCcc
Q 040531          256 YLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       256 ~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .++.+..  ..|+.+.+-|+-.
T Consensus       180 ~~l~~~~--~~~~~~~l~g~~~  199 (285)
T TIGR03649       180 RALTDKV--APNTDYVVLGPEL  199 (285)
T ss_pred             HHhcCCC--cCCCeEEeeCCcc
Confidence            9886542  2355566555433

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.19  E-value=5.5e-11  Score=99.57  Aligned_cols=102  Identities=14%  Similarity=0.162  Sum_probs=78.0

Q ss_pred             cEEEEecC-CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGG-ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGa-s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+=.||.. +||||+++|++|+++|++|+++++...        +.. .   ....+|+++.++++++++.+.+.++++|
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-~---~~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-E---PHPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-c---cCCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            45566765 688999999999999999999886311        100 0   1245899999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK  136 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (285)
                      ++|||||+...    .++.+.+.++|++++..   +.+.+.+
T Consensus        83 iLVnnAgv~d~----~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        83 ILIHSMAVSDY----TPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             EEEECCEeccc----cchhhCCHHHHhhhcch---hhhhccc
Confidence            99999997533    57888899999887554   4444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=99.17  E-value=2.4e-09  Score=96.79  Aligned_cols=202  Identities=15%  Similarity=0.140  Sum_probs=122.8

Q ss_pred             CCcEEEEe----cCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH-------HHhhcCCCceEEEeccCCCHHHHHHH
Q 040531           14 EGKIAIVT----GGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA-------DSLLSSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        14 ~~k~vlIt----Gas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ..+++|||    ||+|.||+.++++|+++|++|++++|+........       .++.  ...+.++.+|+.|   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            45789999    99999999999999999999999999876532211       1111  1247888999866   3322


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG  162 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~  162 (285)
                      +.     ...+|+|||+++.             +.+           +...++++    .++.+..++|++||.+.....
T Consensus       126 ~~-----~~~~d~Vi~~~~~-------------~~~-----------~~~~ll~a----a~~~gvkr~V~~SS~~vyg~~  172 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGK-------------DLD-----------EVEPVADW----AKSPGLKQFLFCSSAGVYKKS  172 (378)
T ss_pred             hc-----cCCccEEEeCCCC-------------CHH-----------HHHHHHHH----HHHcCCCEEEEEccHhhcCCC
Confidence            21     1369999998652             111           12223333    333455689999997643221


Q ss_pred             CC--------CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH
Q 040531          163 LG--------PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV  234 (285)
Q Consensus       163 ~~--------~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                      ..        ...+. +|...+.+.+       ..++.+..+.|+.+..+.......               ...+....
T Consensus       173 ~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~---------------~~~~~~~~  229 (378)
T PLN00016        173 DEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCE---------------EWFFDRLV  229 (378)
T ss_pred             CCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchH---------------HHHHHHHH
Confidence            11        01122 7888887654       247899999999998875321100               00011111


Q ss_pred             hhhhc--c-----cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          235 RGLAN--L-----KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       235 ~~~~~--~-----~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+...  +     ...++.++|+|+++..++....  ..|+.+++-++...
T Consensus       230 ~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~~~~yni~~~~~~  278 (378)
T PLN00016        230 RGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK--AAGQIFNIVSDRAV  278 (378)
T ss_pred             cCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc--ccCCEEEecCCCcc
Confidence            11000  1     1125678999999998886532  35788888777543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.14  E-value=1.9e-09  Score=101.73  Aligned_cols=125  Identities=17%  Similarity=0.239  Sum_probs=86.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCchh--hHHHH-HHh---------hcC---------CCceE
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDAA--GIALA-DSL---------LSS---------SPLVT   67 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~~--~~~~~-~~~---------~~~---------~~~v~   67 (285)
                      -+++|+++||||+|.||+.++++|++.+.   +|+++.|....  ..+.. +++         ++.         ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            36899999999999999999999998753   57777774322  11111 121         111         24689


Q ss_pred             EEeccCCCHH------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh
Q 040531           68 YLHCDVSLEQ------DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV  141 (285)
Q Consensus        68 ~~~~D~s~~~------~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (285)
                      ++.+|++++.      ..+.+.+       .+|+|||+|+....          + +.++..+++|+.++..+++.+...
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f----------~-~~~~~a~~vNV~GT~nLLelA~~~  257 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF----------D-ERYDVAIDINTRGPCHLMSFAKKC  257 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc----------c-cCHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999862      3333322       59999999987521          1 346778999999999999987553


Q ss_pred             hcCCCCceEEEEcccc
Q 040531          142 MVPRRSGCIISTASVA  157 (285)
Q Consensus       142 ~~~~~~g~ii~vss~~  157 (285)
                      -   ...+++++||..
T Consensus       258 ~---~lk~fV~vSTay  270 (605)
T PLN02503        258 K---KLKLFLQVSTAY  270 (605)
T ss_pred             C---CCCeEEEccCce
Confidence            1   224688888854

>PRK12320 hypothetical protein; Provisional

Probab=99.10  E-value=8.9e-09  Score=98.51  Aligned_cols=189  Identities=16%  Similarity=0.115  Sum_probs=120.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|.||++++++|+++|+.|++++|+....         ....+.++++|+++.. +.+++       ..+|+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence            599999999999999999999999999999864421         1245788999999873 33332       258999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV  176 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~  176 (285)
                      ||+|+....          .      ..++|+.++.++++++..    .+ .++|++||..+   .+  ..|.    ..+
T Consensus        65 IHLAa~~~~----------~------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G---~~--~~~~----~aE  114 (699)
T PRK12320         65 IHLAPVDTS----------A------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAG---RP--ELYR----QAE  114 (699)
T ss_pred             EEcCccCcc----------c------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCC---CC--cccc----HHH
Confidence            999975210          0      124789999998888743    22 37999987642   22  1232    233


Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh-hhcccCCCCCHHHHHHHHH
Q 040531          177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-LANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       177 ~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~eeva~~~~  255 (285)
                      .+.+    .   .++.+..+.|+.+..+.....                ....+...... ........+..+|++++++
T Consensus       115 ~ll~----~---~~~p~~ILR~~nVYGp~~~~~----------------~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv  171 (699)
T PRK12320        115 TLVS----T---GWAPSLVIRIAPPVGRQLDWM----------------VCRTVATLLRSKVSARPIRVLHLDDLVRFLV  171 (699)
T ss_pred             HHHH----h---cCCCEEEEeCceecCCCCccc----------------HhHHHHHHHHHHHcCCceEEEEHHHHHHHHH
Confidence            3322    1   347788889988888632110                00111111111 0111111358899999998


Q ss_pred             HHhcCCCCcccccEEEecCCcccc
Q 040531          256 YLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       256 ~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .+++...   +| ++++-||-..+
T Consensus       172 ~al~~~~---~G-iyNIG~~~~~S  191 (699)
T PRK12320        172 LALNTDR---NG-VVDLATPDTTN  191 (699)
T ss_pred             HHHhCCC---CC-EEEEeCCCeeE
Confidence            8885431   44 89998886554

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.05  E-value=1.1e-08  Score=85.83  Aligned_cols=174  Identities=16%  Similarity=0.118  Sum_probs=121.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhh-HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAG-IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.+.++||||.+.||...+..++..=  +..+.++.-.--. ....++. ...++..++..|+.+...+..++.     
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~-----   77 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFE-----   77 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh-ccCCCceEeeccccchHHHHhhhc-----
Confidence            344899999999999999999998763  4444443211100 1112222 235778999999999888776654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--------  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--------  161 (285)
                      ...+|.|+|-|......        .+.-+--...+.|++++..++.......   +--++|++|+..-...        
T Consensus        78 ~~~id~vihfaa~t~vd--------~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~  146 (331)
T KOG0747|consen   78 TEEIDTVIHFAAQTHVD--------RSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVG  146 (331)
T ss_pred             cCchhhhhhhHhhhhhh--------hhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccc
Confidence            24899999998764331        2222234457889999999988876653   3457999998543211        


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          162 ----GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       162 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                          .-+-..|+++|+|.+++++++.+.   +|+.+..+.-+.|..|-.
T Consensus       147 E~s~~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q  192 (331)
T KOG0747|consen  147 EASLLNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQ  192 (331)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCc
Confidence                113468999999999999999876   578999998888888754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.04  E-value=5.9e-09  Score=101.07  Aligned_cols=142  Identities=18%  Similarity=0.139  Sum_probs=97.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ..+++|||||+|.||++++++|.++|+.|..                        ...|++|.+.+.+.++..     ++
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CC
Confidence            3457999999999999999999999987631                        124678888777665542     69


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-----------C-
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-----------G-  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-----------~-  161 (285)
                      |+|||+|+....     +-.+...++-...+++|+.++..+++++...    + .+++++||...+.           + 
T Consensus       430 d~Vih~Aa~~~~-----~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~~~~p~  499 (668)
T PLN02260        430 THVFNAAGVTGR-----PNVDWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATGCIFEYDAKHPEGSGIGF  499 (668)
T ss_pred             CEEEECCcccCC-----CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEcccceecCCcccccccCCCC
Confidence            999999997532     1112223445678999999999999998653    2 2455665532110           1 


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 040531          162 ------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS  197 (285)
Q Consensus       162 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~  197 (285)
                            .+....|+.+|.+.+.+++....   -..+|+..+.
T Consensus       500 ~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        500 KEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence                  11236799999999999987642   2345666554

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.98  E-value=1.7e-08  Score=84.64  Aligned_cols=163  Identities=19%  Similarity=0.187  Sum_probs=116.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ...+++++||||+|.||.+++++|..+|+.|+++|--...-........ ....+..+..|+..+     ++.       
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~-~~~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI-GHPNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc-cCcceeEEEeechhH-----HHH-------
Confidence            4678999999999999999999999999999999876555444433332 245677777787654     322       


Q ss_pred             CccEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-------
Q 040531           92 RLDILFNNAGVLGNQ-SKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-------  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-------  163 (285)
                      .+|.++|.|+..++. -.+.         --+.+..|+.+....+..+.+.     +.++++.|+..- ++.|       
T Consensus        91 evD~IyhLAapasp~~y~~n---------pvktIktN~igtln~lglakrv-----~aR~l~aSTseV-Ygdp~~hpq~e  155 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYKYN---------PVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEV-YGDPLVHPQVE  155 (350)
T ss_pred             HhhhhhhhccCCCCcccccC---------ccceeeecchhhHHHHHHHHHh-----CceEEEeecccc-cCCcccCCCcc
Confidence            488899998876541 1111         1345678999998888876443     366777776543 3322       


Q ss_pred             ----------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          164 ----------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       164 ----------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                                ..+.|.-.|.+.+.|+....++   .||.|....+..+..|.
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPr  204 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPR  204 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCc
Confidence                      3468999999999999987775   68888888887777764

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.88  E-value=6.4e-08  Score=81.21  Aligned_cols=201  Identities=18%  Similarity=0.169  Sum_probs=113.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      ++||||+|-||++++.+|.+.|++|.++.|+.........      ..+.       ..+.+....    +  ..+|+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~v~-------~~~~~~~~~----~--~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PNVT-------LWEGLADAL----T--LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------cccc-------ccchhhhcc----c--CCCCEEE
Confidence            5899999999999999999999999999999887543221      1111       112222111    1  1699999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEcccccccCCCCCccchhh----H
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYTVS----K  172 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~~~~~~~~Y~as----K  172 (285)
                      |.||..-..      ..++.+.=+..++--+..    .+.+...+.+ ..+.++..-+|..++++......|.-.    .
T Consensus        62 NLAG~~I~~------rrWt~~~K~~i~~SRi~~----T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~  131 (297)
T COG1090          62 NLAGEPIAE------RRWTEKQKEEIRQSRINT----TEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD  131 (297)
T ss_pred             ECCCCcccc------ccCCHHHHHHHHHHHhHH----HHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC
Confidence            999974221      114555444555444444    4444444432 223445555566677765544444322    2


Q ss_pred             HHHHHHHHHHHHHhC---CCCcEEEEEeCCCccchhhh---hhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          173 HAIVGLTKNTACELG---KYGIRVNCISPFGVATSMLV---NAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       173 aa~~~l~~~la~e~~---~~~i~v~~v~pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      --+..+++.|-.+..   ..|+||..+.-|.|-++--.   ...+....             .....+ +--...-.++.
T Consensus       132 ~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~-------------glGG~~-GsGrQ~~SWIh  197 (297)
T COG1090         132 DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKL-------------GLGGKL-GSGRQWFSWIH  197 (297)
T ss_pred             ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhh-------------ccCCcc-CCCCceeeeee
Confidence            345555555554432   34899999999988764321   11110000             000000 00001112578


Q ss_pred             HHHHHHHHHHHhcCC
Q 040531          247 ARDIAEAALYLASDE  261 (285)
Q Consensus       247 ~eeva~~~~~l~s~~  261 (285)
                      .||.+++++|++.+.
T Consensus       198 ieD~v~~I~fll~~~  212 (297)
T COG1090         198 IEDLVNAILFLLENE  212 (297)
T ss_pred             HHHHHHHHHHHHhCc
Confidence            999999999999664

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.86  E-value=1.6e-08  Score=87.88  Aligned_cols=85  Identities=25%  Similarity=0.250  Sum_probs=67.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCc---hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDD---AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++|+++|+|| ||+|++++..|++.|++ |++++|+.   ++.+++.+++.+....+.+..+|+++.++++..++  
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            3578999999999 69999999999999987 99999987   67777777775544556667789988777665443  


Q ss_pred             HHHcCCccEEEECCCCC
Q 040531           87 ISKHGRLDILFNNAGVL  103 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (285)
                           ..|+||||....
T Consensus       199 -----~~DilINaTp~G  210 (289)
T PRK12548        199 -----SSDILVNATLVG  210 (289)
T ss_pred             -----cCCEEEEeCCCC
Confidence                 469999997654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.83  E-value=2.4e-08  Score=90.22  Aligned_cols=81  Identities=25%  Similarity=0.288  Sum_probs=63.5

Q ss_pred             ccCCCcEEEEecC---------------CCc-hhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC
Q 040531           11 KTLEGKIAIVTGG---------------ARG-IGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS   74 (285)
Q Consensus        11 ~~l~~k~vlItGa---------------s~g-IG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s   74 (285)
                      .+|+||++|||||               |+| +|+++|++|+++|++|++++++.+ +.     .   ..  .+..+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~---~~--~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T---PA--GVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C---CC--CcEEEccC
Confidence            4689999999999               445 999999999999999999998652 11     0   11  23467999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 040531           75 LEQDIQNLINVTISKHGRLDILFNNAGVLGN  105 (285)
Q Consensus        75 ~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~  105 (285)
                      +.+++.+.++   +.++.+|++|||||+...
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            9888776655   557889999999998643

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.79  E-value=6.4e-07  Score=82.50  Aligned_cols=242  Identities=19%  Similarity=0.092  Sum_probs=146.6

Q ss_pred             ccCCCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhh----cCCCceEEEeccCCCHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGA-RGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLL----SSSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        11 ~~l~~k~vlItGas-~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~----~~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      ..+.++++|||||+ +.||.+++..|+..|++|+++..+.. .-.+..+.+=    ..+..+.++.++.++..+++.+++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            35789999999998 88999999999999999999876543 3334455552    234568899999999999999999


Q ss_pred             HHHHHcC--------------CccEEEECCCCCCCCCCCCCCCCCCH--HHHHHHHHhhhhhHHHHHHHHHHhhcCCCCc
Q 040531           85 VTISKHG--------------RLDILFNNAGVLGNQSKHKSITDFDA--NEFDNIIRINVRGAALGMKYAAKVMVPRRSG  148 (285)
Q Consensus        85 ~i~~~~~--------------~id~lv~~ag~~~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g  148 (285)
                      .|-++..              .+|.++--|.....    +.+.+...  |.-.+.|-.|+.-.+-.++..-...--...-
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~----G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~  547 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS----GELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRL  547 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCCcc----CccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccce
Confidence            9865322              36778877766433    34444443  2223344444443333332221100000123


Q ss_pred             eEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHh--CCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHH
Q 040531          149 CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL--GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE  226 (285)
Q Consensus       149 ~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~--~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      ++|.-.|.. ...+-+...|+-+|++++.++.-|..|-  +. -+.+..-+.|++...-+-             ...+..
T Consensus       548 hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLM-------------g~Ndii  612 (866)
T COG4982         548 HVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLM-------------GHNDII  612 (866)
T ss_pred             EEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeecccccc-------------CCcchh
Confidence            556555532 1223456789999999999998877763  22 245555566776532110             011111


Q ss_pred             HHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcc---cccEEEecCCccc
Q 040531          227 EEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYI---SGHNLVVDGGFTT  278 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~---~G~~i~vdgG~~~  278 (285)
                      ...+++       ..-+..+++|+|..++-||+.+....   +--...+.||...
T Consensus       613 v~aiEk-------~GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         613 VAAIEK-------AGVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             HHHHHH-------hCceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            122222       12345689999999999998753322   2233556677654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.77  E-value=6.7e-08  Score=81.36  Aligned_cols=201  Identities=17%  Similarity=0.131  Sum_probs=118.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      ++|+||+|.+|+.+++.|++.+++|.++.|+...  ...+++...  .+.++.+|+.|.+++.++++       .+|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~--g~~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL--GAEVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT--TTEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc--cceEeecccCCHHHHHHHHc-------CCceEE
Confidence            6899999999999999999999999999998843  223333332  34567999999999888776       799999


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC----CCccchhhHH
Q 040531           98 NNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL----GPHAYTVSKH  173 (285)
Q Consensus        98 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~----~~~~Y~asKa  173 (285)
                      ++.+....         ...+           ....+++++..    .+-.++| .||........    +...+-..|.
T Consensus        70 ~~~~~~~~---------~~~~-----------~~~~li~Aa~~----agVk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~  124 (233)
T PF05368_consen   70 SVTPPSHP---------SELE-----------QQKNLIDAAKA----AGVKHFV-PSSFGADYDESSGSEPEIPHFDQKA  124 (233)
T ss_dssp             EESSCSCC---------CHHH-----------HHHHHHHHHHH----HT-SEEE-ESEESSGTTTTTTSTTHHHHHHHHH
T ss_pred             eecCcchh---------hhhh-----------hhhhHHHhhhc----cccceEE-EEEecccccccccccccchhhhhhh
Confidence            98775311         0111           11233455433    2344566 45544433211    1122334677


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC---CC-CCHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG---VT-LKARD  249 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~ee  249 (285)
                      .++.+.+..       ++....|.||+................ ...   .         ...+..+..   .. .+++|
T Consensus       125 ~ie~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~-~~~---~---------~~~~~~~~~~~~~~~~~~~D  184 (233)
T PF05368_consen  125 EIEEYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIK-KSK---D---------VVTLPGPGNQKAVPVTDTRD  184 (233)
T ss_dssp             HHHHHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSC-CTS---S---------EEEEETTSTSEEEEEEHHHH
T ss_pred             hhhhhhhhc-------cccceeccccchhhhhhhhhccccccc-ccc---e---------EEEEccCCCccccccccHHH
Confidence            776665543       788899999987665544222210000 000   0         000001111   12 38899


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecC
Q 040531          250 IAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      +|+.+..++.+...+-.|..+.+-|
T Consensus       185 vg~~va~il~~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  185 VGRAVAAILLDPEKHNNGKTIFLAG  209 (233)
T ss_dssp             HHHHHHHHHHSGGGTTEEEEEEEGG
T ss_pred             HHHHHHHHHcChHHhcCCEEEEeCC
Confidence            9999999998866555788888755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.72  E-value=1.7e-07  Score=78.84  Aligned_cols=160  Identities=18%  Similarity=0.193  Sum_probs=115.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+++|-++-|.||+|.+|+-++.+|++.|.+|++-.|-++......+-. -.-+++.+...|+.|+++|+++++      
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm-GdLGQvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM-GDLGQVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeec-ccccceeeeccCCCCHHHHHHHHH------
Confidence            3578889999999999999999999999999999988665433322222 123679999999999999999987      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                       .-+++||..|.-.+      -.+++      ..++|+.++-.+.+.+    ++.+--++|.+|+.++.  ....+-|--
T Consensus       130 -~sNVVINLIGrd~e------Tknf~------f~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan--v~s~Sr~Lr  190 (391)
T KOG2865|consen  130 -HSNVVINLIGRDYE------TKNFS------FEDVNVHIAERLARIC----KEAGVERFIHVSCLGAN--VKSPSRMLR  190 (391)
T ss_pred             -hCcEEEEeeccccc------cCCcc------cccccchHHHHHHHHH----HhhChhheeehhhcccc--ccChHHHHH
Confidence             46889998886322      11222      2457777776666655    33456689999998854  444566788


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccc
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVAT  203 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t  203 (285)
                      +|++-+--++.   ++.+    ...|.|.-|..
T Consensus       191 sK~~gE~aVrd---afPe----AtIirPa~iyG  216 (391)
T KOG2865|consen  191 SKAAGEEAVRD---AFPE----ATIIRPADIYG  216 (391)
T ss_pred             hhhhhHHHHHh---hCCc----ceeechhhhcc
Confidence            88888877765   3333    24567765554

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.69  E-value=1.9e-07  Score=76.48  Aligned_cols=84  Identities=27%  Similarity=0.341  Sum_probs=67.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++++++|+||+|++|+.+++.|++.|++|++++|+.++++++.+.+.+.. ......+|..+.+++.+.++      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence            47899999999999999999999999999999999999988888877764321 23455678888888776654      


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                       ..|+||++...
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             57988886553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.60  E-value=4.3e-06  Score=71.76  Aligned_cols=132  Identities=20%  Similarity=0.169  Sum_probs=95.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.+|||||+|.+|++++++|.+.|+.|.+..|+.+......       ..+.+...|+.++.++...++       .+|.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence            36899999999999999999999999999999998876654       568999999999999888766       6888


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      +++..+... .   ..          ..............++..     ....+++.+|...+..  .....|..+|.+.
T Consensus        67 ~~~i~~~~~-~---~~----------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~  125 (275)
T COG0702          67 VLLISGLLD-G---SD----------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAV  125 (275)
T ss_pred             EEEEecccc-c---cc----------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHH
Confidence            888776542 1   00          112223333334444432     2245577777765543  2346799999999


Q ss_pred             HHHHHHH
Q 040531          176 VGLTKNT  182 (285)
Q Consensus       176 ~~l~~~l  182 (285)
                      +...++.
T Consensus       126 e~~l~~s  132 (275)
T COG0702         126 EAALRSS  132 (275)
T ss_pred             HHHHHhc
Confidence            9888764

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.59  E-value=4.2e-07  Score=76.30  Aligned_cols=101  Identities=15%  Similarity=0.235  Sum_probs=68.1

Q ss_pred             CcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARG-IGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~g-IG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +.+-.||+.|+| ||+++|++|+++|+.|++++|+....     .  .....+.++.++     +..++.+.+.+.++.+
T Consensus        15 D~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~--~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~   82 (229)
T PRK06732         15 DSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----P--EPHPNLSIIEIE-----NVDDLLETLEPLVKDH   82 (229)
T ss_pred             CCceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----C--CCCCCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence            346678876765 99999999999999999998764211     0  012345555543     2223333344445679


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA  131 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  131 (285)
                      |++|||||+...    .+....+.++|.+++++|.+..
T Consensus        83 DivIh~AAvsd~----~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVSDY----TPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccCCc----eehhhhhhhhhhhhhhhhhhhc
Confidence            999999998642    4556677888999988876554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.57  E-value=3.1e-07  Score=82.74  Aligned_cols=114  Identities=20%  Similarity=0.219  Sum_probs=76.7

Q ss_pred             ccCCCcEEEEecC---------------CCc-hhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC
Q 040531           11 KTLEGKIAIVTGG---------------ARG-IGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS   74 (285)
Q Consensus        11 ~~l~~k~vlItGa---------------s~g-IG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s   74 (285)
                      .+++||++|||||               ||| +|.++|++|..+|++|++++++....         ...  ....+|++
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~  249 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVS  249 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEec
Confidence            3589999999999               667 99999999999999999988765431         111  22568999


Q ss_pred             CHHHH-HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHH
Q 040531           75 LEQDI-QNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAK  140 (285)
Q Consensus        75 ~~~~i-~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (285)
                      +.+++ +.+++++   ++.+|++|+|||+....+....-..++.  ..+.+.+|+...--+++.+..
T Consensus       250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~--~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       250 TAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKK--QGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             cHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccc--cCCceeEEEEeCcHHHHHHHh
Confidence            98888 5555432   4679999999999644221111111111  122355777777666666644

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.51  E-value=6.5e-07  Score=87.48  Aligned_cols=165  Identities=18%  Similarity=0.269  Sum_probs=133.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchh--hHH-HHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAA--GIA-LADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~--~~~-~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..|..+|+||-||.|.+++.+|.++|++ +++++|+--+  -+. .....++.+.+|.+-.-|++..+...+++++- .+
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NK 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hh
Confidence            5789999999999999999999999988 7888876332  222 22344566788888888999999999988754 45


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      .+.+-.++|.|.+...    ..+++.++++|++.-+..+.++.++-+.-.....  .-..+|.+||...-.+..+...|+
T Consensus      1846 l~~vGGiFnLA~VLRD----~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNYG 1919 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRD----GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNYG 1919 (2376)
T ss_pred             cccccchhhHHHHHHh----hhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCcccccc
Confidence            6889999999988765    6788999999999999999999988776555432  235788899988778888999999


Q ss_pred             hhHHHHHHHHHHHHHH
Q 040531          170 VSKHAIVGLTKNTACE  185 (285)
Q Consensus       170 asKaa~~~l~~~la~e  185 (285)
                      .+..+++.+++.-..+
T Consensus      1920 ~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1920 LANSAMERICEQRRHE 1935 (2376)
T ss_pred             hhhHHHHHHHHHhhhc
Confidence            9999999999875443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.43  E-value=3.4e-06  Score=76.72  Aligned_cols=178  Identities=14%  Similarity=0.135  Sum_probs=113.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCch------hhH-----HHHHHhhcC----CCceEEEec
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDA------AGI-----ALADSLLSS----SPLVTYLHC   71 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~------~~~-----~~~~~~~~~----~~~v~~~~~   71 (285)
                      ...++||+++||||+|++|+-++.+|++.--   ++++.-|...      +++     .+.+.+.+.    -.++..+.+
T Consensus         7 ~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~G   86 (467)
T KOG1221|consen    7 VQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAG   86 (467)
T ss_pred             HHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccc
Confidence            3458999999999999999999999997642   3555544211      111     122222222    257889999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEE
Q 040531           72 DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCII  151 (285)
Q Consensus        72 D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii  151 (285)
                      |+++++---+.-+. ......+|++||.|+...-           .|.++..+.+|++|+..+++.+.....   -..++
T Consensus        87 Di~~~~LGis~~D~-~~l~~eV~ivih~AAtvrF-----------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~v  151 (467)
T KOG1221|consen   87 DISEPDLGISESDL-RTLADEVNIVIHSAATVRF-----------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALV  151 (467)
T ss_pred             cccCcccCCChHHH-HHHHhcCCEEEEeeeeecc-----------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEE
Confidence            99886432111111 0112369999999987532           244677899999999999988766542   23577


Q ss_pred             EEcccccccC--------CC--------------------------------CCccchhhHHHHHHHHHHHHHHhCCCCc
Q 040531          152 STASVASLMG--------GL--------------------------------GPHAYTVSKHAIVGLTKNTACELGKYGI  191 (285)
Q Consensus       152 ~vss~~~~~~--------~~--------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~i  191 (285)
                      ++|+.-+...        .+                                ....|.-+|+-.++++..-     ..++
T Consensus       152 hVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----~~~l  226 (467)
T KOG1221|consen  152 HVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----AENL  226 (467)
T ss_pred             EeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----ccCC
Confidence            7777544311        00                                1245777787777777653     2367


Q ss_pred             EEEEEeCCCccchhhh
Q 040531          192 RVNCISPFGVATSMLV  207 (285)
Q Consensus       192 ~v~~v~pg~v~t~~~~  207 (285)
                      .+..++|++|.+....
T Consensus       227 PivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  227 PLVIIRPSIITSTYKE  242 (467)
T ss_pred             CeEEEcCCceeccccC
Confidence            8888999877665433

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.38  E-value=1.3e-06  Score=72.16  Aligned_cols=180  Identities=14%  Similarity=0.072  Sum_probs=118.8

Q ss_pred             ccccccccCCCc-EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH-HHhhc-----CCCceEEEeccCCCHH
Q 040531            5 TEKKAYKTLEGK-IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA-DSLLS-----SSPLVTYLHCDVSLEQ   77 (285)
Q Consensus         5 ~~~~~~~~l~~k-~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~-~~~~~-----~~~~v~~~~~D~s~~~   77 (285)
                      +++..+..++.| ++||||-+|-=|.-++..|+.+|+.|+.+-|+.+...... +.+-.     .+......-.|++|..
T Consensus        17 t~~ae~~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss   96 (376)
T KOG1372|consen   17 TPAAELGAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSS   96 (376)
T ss_pred             CccccccCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchH
Confidence            344555566665 8999999999999999999999999998877665544332 33311     1345778899999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      .+.+++..+     .++-+.|.|+-...        ..+.+--+..-++...|++.++.++...-...+  .-.+-.|..
T Consensus        97 ~L~k~I~~i-----kPtEiYnLaAQSHV--------kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~--VrfYQAstS  161 (376)
T KOG1372|consen   97 CLIKLISTI-----KPTEVYNLAAQSHV--------KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK--VRFYQASTS  161 (376)
T ss_pred             HHHHHHhcc-----Cchhhhhhhhhcce--------EEEeecccceeeccchhhhhHHHHHHhcCcccc--eeEEecccH
Confidence            999998876     56667777764322        222233344556788899999888866544332  222223322


Q ss_pred             ccc------------CCCCCccchhhHHHHHHHHHHHHH---HhCCCCcEEEEEeCC
Q 040531          158 SLM------------GGLGPHAYTVSKHAIVGLTKNTAC---ELGKYGIRVNCISPF  199 (285)
Q Consensus       158 ~~~------------~~~~~~~Y~asKaa~~~l~~~la~---e~~~~~i~v~~v~pg  199 (285)
                      -..            |+.+.++|+++|.+-.-++-....   .++..||-+|.=+|-
T Consensus       162 ElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  162 ELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             hhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence            222            233568999999876554433332   345678888888884

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.35  E-value=2e-05  Score=62.45  Aligned_cols=151  Identities=13%  Similarity=0.096  Sum_probs=103.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.+.|.||||..|..|+++..++|+.|..+.||..+....        ..+..++.|+.|++++.+.+.       ..|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCce
Confidence            3578999999999999999999999999999999886543        347789999999998866654       7999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC--------C-Cc
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL--------G-PH  166 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~--------~-~~  166 (285)
                      ||..-|...+.         ..+...           ...+.++..++..+..|++.++..++..-.+        . ..
T Consensus        66 VIsA~~~~~~~---------~~~~~~-----------k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~  125 (211)
T COG2910          66 VISAFGAGASD---------NDELHS-----------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPA  125 (211)
T ss_pred             EEEeccCCCCC---------hhHHHH-----------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCch
Confidence            99987764221         111111           1145555556555778999999988765322        2 12


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      .|-..-.+.--+.+.|..|   ..+.-.-++|.....|
T Consensus       126 ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         126 EYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             hHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCC
Confidence            3433333333344555554   4477777888776665

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.30  E-value=3.7e-06  Score=75.11  Aligned_cols=77  Identities=23%  Similarity=0.363  Sum_probs=66.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +.+||.|+ |+||+.+|..|++.| .+|.+++|+.+.+.+..+..   ..++..+++|+.|.+++.++++       ..|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cCC
Confidence            57899999 999999999999999 88999999999888877655   3489999999999999888876       349


Q ss_pred             EEEECCCCC
Q 040531           95 ILFNNAGVL  103 (285)
Q Consensus        95 ~lv~~ag~~  103 (285)
                      ++||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999987653

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.30  E-value=2.1e-05  Score=64.30  Aligned_cols=197  Identities=16%  Similarity=0.158  Sum_probs=115.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++++|||++|=+|++|.+.+.++|.   +.++.+.                     -.+|+++.++.+++++..     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhcc-----C
Confidence            6899999999999999999998874   2333221                     247999999999998753     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCC--CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-----c-----
Q 040531           93 LDILFNNAGVLGNQSKHKSITD--FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-----M-----  160 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-----~-----  160 (285)
                      +.++||.|+..+.     .+..  .+.+-|+..+++|-    ++++.+.+.    +..++++..|..-+     +     
T Consensus        56 PthVIhlAAmVGG-----lf~N~~ynldF~r~Nl~ind----NVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   56 PTHVIHLAAMVGG-----LFHNNTYNLDFIRKNLQIND----NVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             CceeeehHhhhcc-----hhhcCCCchHHHhhcceech----hHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHH
Confidence            8889999876542     2222  24455555444442    344444332    22234444443311     0     


Q ss_pred             ------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH
Q 040531          161 ------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV  234 (285)
Q Consensus       161 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                            +.|....|+-+|..+.-..+..+.++   |-...++.|-.+..|--.-....       .......-..+-+.+
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~-------sHVlPali~r~h~ak  192 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPEN-------SHVLPALIHRFHEAK  192 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCccc-------ccchHHHHHHHHHHH
Confidence                  12234569999988888888888875   44556666666655432211110       011111111111111


Q ss_pred             h---------hhhcccCCCCCHHHHHHHHHHHhcCC
Q 040531          235 R---------GLANLKGVTLKARDIAEAALYLASDE  261 (285)
Q Consensus       235 ~---------~~~~~~~~~~~~eeva~~~~~l~s~~  261 (285)
                      .         +-.+|++.++-..|+|+++.|++.+-
T Consensus       193 ~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y  228 (315)
T KOG1431|consen  193 RNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREY  228 (315)
T ss_pred             hcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhh
Confidence            1         11345566677789999999998663

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.27  E-value=1.6e-05  Score=71.32  Aligned_cols=174  Identities=15%  Similarity=0.149  Sum_probs=103.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..+-.+|+|+||+|++|+-+++.|.++|..|..+-|+.+..+.... +.........+..|.....++..-+.   +...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~---~~~~  151 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLV---EAVP  151 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhh---hhcc
Confidence            3567799999999999999999999999999999999888776655 21223345555566555444333222   2211


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           92 -RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        92 -~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                       ...+++.++|....   +.        +...-..+...|..++++++..    .+-.++++++++++......+..+..
T Consensus       152 ~~~~~v~~~~ggrp~---~e--------d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~~~  216 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPE---EE--------DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNILLL  216 (411)
T ss_pred             ccceeEEecccCCCC---cc--------cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhhhh
Confidence             24566666654321   11        1111223444566666777633    34567999999887665544333332


Q ss_pred             hHHHHHHHH-HHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          171 SKHAIVGLT-KNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       171 sKaa~~~l~-~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                        .....-. +...+++...|+.-..|.||....+..
T Consensus       217 --~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~  251 (411)
T KOG1203|consen  217 --NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTG  251 (411)
T ss_pred             --hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCC
Confidence              1111111 233344456688888899987765443

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.23  E-value=5.7e-06  Score=76.60  Aligned_cols=77  Identities=22%  Similarity=0.259  Sum_probs=59.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+.+.+.  .+.++..|..+            +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~--~~~~~~~~~~~------------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL--GIELVLGEYPE------------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCEEEeCCcch------------hHh
Confidence            68999999999888 99999999999999999999975 4444444444332  35577788875            113


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      +.+|+||+++|+.
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            4799999999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.21  E-value=7.7e-06  Score=62.89  Aligned_cols=78  Identities=22%  Similarity=0.243  Sum_probs=59.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++++++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+.+.  ...+.++..  .+..   +..      
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~--~~~~---~~~------   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL--EDLE---EAL------   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG--GGHC---HHH------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH--HHHH---HHH------
Confidence            4799999999998 89999999999999988 9999999999999988872  223444433  2222   222      


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                       ...|++|++.+..
T Consensus        74 -~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 -QEADIVINATPSG   86 (135)
T ss_dssp             -HTESEEEE-SSTT
T ss_pred             -hhCCeEEEecCCC
Confidence             2689999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN00106 malate dehydrogenase

Probab=98.20  E-value=1.5e-05  Score=70.21  Aligned_cols=151  Identities=16%  Similarity=0.095  Sum_probs=95.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..+.++|||++|.+|..++..|+.++.  .++++|+++.  +...-.+.......  ...++++.+++.+.       +.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~-------l~   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINTPA--QVRGFLGDDQLGDA-------LK   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCcCc--eEEEEeCCCCHHHH-------cC
Confidence            456899999999999999999997764  6999999872  21111222111222  22243333333333       34


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc----c--------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS----L--------  159 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~----~--------  159 (285)
                      ..|++|+.||....          +...+.+.+..|+.....+.+.+.+.-   ..+.++.+|....    .        
T Consensus        86 ~aDiVVitAG~~~~----------~g~~R~dll~~N~~i~~~i~~~i~~~~---p~aivivvSNPvD~~~~i~t~~~~~~  152 (323)
T PLN00106         86 GADLVIIPAGVPRK----------PGMTRDDLFNINAGIVKTLCEAVAKHC---PNALVNIISNPVNSTVPIAAEVLKKA  152 (323)
T ss_pred             CCCEEEEeCCCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCCccccHHHHHHHHHHc
Confidence            79999999997422          113366778888888777777665532   2344444444443    1        


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHhCC
Q 040531          160 MGGLGPHAYTVSKHAIVGLTKNTACELGK  188 (285)
Q Consensus       160 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~  188 (285)
                      .+.|....|+.++.-...|-..+|.++.-
T Consensus       153 s~~p~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        153 GVYDPKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHHhCC
Confidence            23555678999886667788888888753

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.19  E-value=8.3e-06  Score=74.02  Aligned_cols=76  Identities=28%  Similarity=0.448  Sum_probs=60.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |+|.|+ |.+|+.+++.|++.+-  +|++.+|+.++++++.+++  ...++.++++|+.|.+++.++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 9999999999999874  7999999999998888765  36789999999999999888876       5699


Q ss_pred             EEECCCCC
Q 040531           96 LFNNAGVL  103 (285)
Q Consensus        96 lv~~ag~~  103 (285)
                      |||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999853

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.19  E-value=2.1e-05  Score=61.81  Aligned_cols=160  Identities=12%  Similarity=0.042  Sum_probs=105.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..|+++.++|.||+|-.|..+.+++++.+  ..|+++.|++....+.       +..+.....|++..++...-      
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~~a~~------   80 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQLATN------   80 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHHHHhh------
Confidence            45789999999999999999999999988  4588888875332221       34567778888665554333      


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                       +-.+|+++|+-|.........-+...+.+           -.+.+.+.+    ++++-.+|+.+||.++....  ...|
T Consensus        81 -~qg~dV~FcaLgTTRgkaGadgfykvDhD-----------yvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY  142 (238)
T KOG4039|consen   81 -EQGPDVLFCALGTTRGKAGADGFYKVDHD-----------YVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLY  142 (238)
T ss_pred             -hcCCceEEEeecccccccccCceEeechH-----------HHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceee
Confidence             33799999998875432211222222222           222334443    34566789999998876433  3568


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      --.|.-++.=+..|.-      =++..+.||++..+...
T Consensus       143 ~k~KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  143 MKMKGEVERDVIELDF------KHIIILRPGPLLGERTE  175 (238)
T ss_pred             eeccchhhhhhhhccc------cEEEEecCcceeccccc
Confidence            8888887766544422      26778899998765443

>PRK09620 hypothetical protein; Provisional

Probab=98.06  E-value=7.2e-06  Score=68.73  Aligned_cols=83  Identities=18%  Similarity=0.219  Sum_probs=52.3

Q ss_pred             CCCcEEEEecCC----------------CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH
Q 040531           13 LEGKIAIVTGGA----------------RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE   76 (285)
Q Consensus        13 l~~k~vlItGas----------------~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~   76 (285)
                      |+||.||||+|.                |.+|.++|++|+++|+.|+++++.......   ... ....+..+..    .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s----~   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEG----I   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEec----H
Confidence            579999999986                999999999999999999998864321110   000 0112223333    2


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCC
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~  104 (285)
                      .++...+.++.++ ..+|++||+|+...
T Consensus        73 ~d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         73 IDLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHHHhcc-cCCCEEEECccccc
Confidence            2222233333322 25899999999854

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.03  E-value=2.1e-05  Score=68.40  Aligned_cols=82  Identities=13%  Similarity=0.170  Sum_probs=70.8

Q ss_pred             EEEEecCCCchhHHHHHHHHH----CCCeEEEEecCchhhHHHHHHhhcCC----CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVK----HGAKVVIADIDDAAGIALADSLLSSS----PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~----~g~~v~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      -++|-||||.-|.-+++++.+    .+.++.+.+||++++++..+.+.+..    .....+.||.+|++++.+++.    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            479999999999999999999    78999999999999999999886654    233488999999999999877    


Q ss_pred             HcCCccEEEECCCCCCC
Q 040531           89 KHGRLDILFNNAGVLGN  105 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~  105 (285)
                         .-.+|||++|.+.-
T Consensus        83 ---~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   83 ---QARVIVNCVGPYRF   96 (423)
T ss_pred             ---hhEEEEecccccee
Confidence               46789999998653

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.03  E-value=2.8e-05  Score=68.62  Aligned_cols=74  Identities=19%  Similarity=0.199  Sum_probs=55.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHC-C-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKH-G-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++++|+++||||+|.||+.++++|+++ | ..++++.|+.+++..+.+++.         ..|+.   ++.       +
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~---------~~~i~---~l~-------~  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG---------GGKIL---SLE-------E  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc---------cccHH---hHH-------H
Confidence            3689999999999999999999999864 5 579999998888777665442         12222   222       2


Q ss_pred             HcCCccEEEECCCCC
Q 040531           89 KHGRLDILFNNAGVL  103 (285)
Q Consensus        89 ~~~~id~lv~~ag~~  103 (285)
                      .....|++|+.++..
T Consensus       212 ~l~~aDiVv~~ts~~  226 (340)
T PRK14982        212 ALPEADIVVWVASMP  226 (340)
T ss_pred             HHccCCEEEECCcCC
Confidence            234699999999864

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.95  E-value=3.7e-05  Score=63.22  Aligned_cols=160  Identities=17%  Similarity=0.262  Sum_probs=102.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVK-HGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~-~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      -+...+||||+-|-+|.++|..|-. .|.+ |++.+-.... +    ...+.+   -++..|+-|..++++.+-     .
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~----~V~~~G---PyIy~DILD~K~L~eIVV-----n  108 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-A----NVTDVG---PYIYLDILDQKSLEEIVV-----N  108 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-h----hhcccC---CchhhhhhccccHHHhhc-----c
Confidence            3566899999999999999999874 4755 5554433322 1    111111   246678888777776643     2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------C-
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------L-  163 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------~-  163 (285)
                      .+||-+||-.+..+.         ..+...--..++|+.|.-++++.+..+     +-++..-|.++++.|.      | 
T Consensus       109 ~RIdWL~HfSALLSA---------vGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iFVPSTIGAFGPtSPRNPTPd  174 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSA---------VGETNVPLALQVNIRGVHNILQVAAKH-----KLKVFVPSTIGAFGPTSPRNPTPD  174 (366)
T ss_pred             cccceeeeHHHHHHH---------hcccCCceeeeecchhhhHHHHHHHHc-----CeeEeecccccccCCCCCCCCCCC
Confidence            489999997654322         111222334789999999988876443     3456666666666442      2 


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEE-eCCCcc
Q 040531          164 -----GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI-SPFGVA  202 (285)
Q Consensus       164 -----~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v-~pg~v~  202 (285)
                           +...|+.||--.+-+-+.+...   +|+.+.++ .||.+.
T Consensus       175 ltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is  216 (366)
T KOG2774|consen  175 LTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIIS  216 (366)
T ss_pred             eeeecCceeechhHHHHHHHHHHHHhh---cCccceecccCcccc
Confidence                 3457999999998888877654   45655555 355443

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.94  E-value=5e-05  Score=66.84  Aligned_cols=151  Identities=19%  Similarity=0.103  Sum_probs=90.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++-+.++|+|++|.||..++..|+.++  ..++++|++...  ...-.+......  ....+.+|..+..+.+      
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g~a~Dl~~~~~~--~~v~~~td~~~~~~~l------   74 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--GVAADLSHIDTP--AKVTGYADGELWEKAL------   74 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--ccccchhhcCcC--ceEEEecCCCchHHHh------
Confidence            4567799999999999999999999655  579999983222  212222211122  2334555544422222      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc----------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL----------  159 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~----------  159 (285)
                       ...|+||+++|....          +.+.+.+.++.|+...-.+++++.+    .+..++|+++|-...          
T Consensus        75 -~gaDvVVitaG~~~~----------~~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~SNPvdv~~~~~~~~~  139 (321)
T PTZ00325         75 -RGADLVLICAGVPRK----------PGMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVSNPVNSTVPIAAETL  139 (321)
T ss_pred             -CCCCEEEECCCCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEecCcHHHHHHHHHhhh
Confidence             369999999997421          1123667788898877777766644    444557777664321          


Q ss_pred             ---cCCCCCccchhhHHHHHHHHHHHHHHhC
Q 040531          160 ---MGGLGPHAYTVSKHAIVGLTKNTACELG  187 (285)
Q Consensus       160 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~  187 (285)
                         .+.|....|+.+--=-..|-..+|+.+.
T Consensus       140 ~~~sg~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        140 KKAGVYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             hhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence               1234455677762222234445666553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.79  E-value=0.00044  Score=75.46  Aligned_cols=180  Identities=13%  Similarity=0.092  Sum_probs=116.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+.++.++|++.+++++.+++.+|.++|++|+++...+.    ...........+..+...-.+.+++..+++.+....+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhcccc
Confidence            355888999988999999999999999999888752211    1111111122233445555667888888888888788


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc---
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY---  168 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y---  168 (285)
                      .++.+||..+.....  ..+....   .+...-...+...|.+.|.+.+.+...+.+.++.++...+..+..+....   
T Consensus      1828 ~~~g~i~l~~~~~~~--~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~ 1902 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSV--ADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGT 1902 (2582)
T ss_pred             ccceEEEeccccccc--ccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccc
Confidence            999999976643210  0111111   01111113334467777877666655567889999988766554322221   


Q ss_pred             -----hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 040531          169 -----TVSKHAIVGLTKNTACELGKYGIRVNCISPFG  200 (285)
Q Consensus       169 -----~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~  200 (285)
                           ....+++.+|+|+++.|+....+|...+.|..
T Consensus      1903 ~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1903 QQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             cccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence                 24589999999999999988667777777753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.79  E-value=0.00011  Score=65.10  Aligned_cols=116  Identities=15%  Similarity=0.118  Sum_probs=65.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-------CeEEEEecCchh--hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG-------AKVVIADIDDAA--GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .++||||+|.+|.+++..|+..+       ..++++++++..  ++...-.+..   -......|++...+.       .
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d---~~~~~~~~~~~~~~~-------~   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD---CAFPLLKSVVATTDP-------E   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh---ccccccCCceecCCH-------H
Confidence            58999999999999999999855       489999996532  1111101100   000111233222222       2


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC--CCceEEEEccc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR--RSGCIISTASV  156 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~ii~vss~  156 (285)
                      +.+...|+|||.||....       ...+.   .+.++.|+.=.    +.+.+.+.+.  ..+.+|.+|..
T Consensus        74 ~~l~~aDiVI~tAG~~~~-------~~~~R---~~l~~~N~~i~----~~i~~~i~~~~~~~~iiivvsNP  130 (325)
T cd01336          74 EAFKDVDVAILVGAMPRK-------EGMER---KDLLKANVKIF----KEQGEALDKYAKKNVKVLVVGNP  130 (325)
T ss_pred             HHhCCCCEEEEeCCcCCC-------CCCCH---HHHHHHHHHHH----HHHHHHHHHhCCCCeEEEEecCc
Confidence            233479999999997532       11232   45566666544    4444444333  35677777753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.76  E-value=0.00039  Score=60.64  Aligned_cols=138  Identities=17%  Similarity=0.211  Sum_probs=83.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|++++|+|+++++|.++++.+...|.+|++++++.+..+.+. .+   +.+   ..+|..+.+..+.+.+ ... ...+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~---~~~~~~~~~~~~~~~~-~~~-~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GAD---AVFNYRAEDLADRILA-ATA-GQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCC---EEEeCCCcCHHHHHHH-HcC-CCce
Confidence            6899999999999999999999999999999998877655442 22   222   1234444444333322 211 2369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc------------cC
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL------------MG  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~------------~~  161 (285)
                      |++++++|..            .   .               ......+  +..|+++.+++....            ..
T Consensus       215 d~vi~~~~~~------------~---~---------------~~~~~~l--~~~g~~v~~~~~~~~~~~~~~~~~~~~~~  262 (325)
T cd08253         215 DVIIEVLANV------------N---L---------------AKDLDVL--APGGRIVVYGSGGLRGTIPINPLMAKEAS  262 (325)
T ss_pred             EEEEECCchH------------H---H---------------HHHHHhh--CCCCEEEEEeecCCcCCCChhHHHhcCce
Confidence            9999987631            0   0               1111222  345888887763210            00


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcE
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIR  192 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~  192 (285)
                      .+....|...|..+..+.+.+...+....++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         263 IRGVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             EEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            1122346677777888887777666554443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.74  E-value=0.00019  Score=56.27  Aligned_cols=76  Identities=22%  Similarity=0.284  Sum_probs=56.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++++++|+|+ |++|+++++.|++.| ..|.+++|+.++.++..+++....     +..+.++.++.          .
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence            477899999998 899999999999996 789999999888877776653211     22334443322          2


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+||++....
T Consensus        80 ~~~Dvvi~~~~~~   92 (155)
T cd01065          80 AEADLIINTTPVG   92 (155)
T ss_pred             ccCCEEEeCcCCC
Confidence            4799999998653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.72  E-value=7.4e-05  Score=69.16  Aligned_cols=80  Identities=23%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|+++|||+++ +|+++|+.|++.|++|++.+++........+.+.+.+.  .+...+.  ...+   .+      
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~--~~~~~~~--~~~~---~~------   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGI--KVICGSH--PLEL---LD------   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCC--EEEeCCC--CHHH---hc------
Confidence            457899999999986 99999999999999999999876544444444433332  2222211  1111   11      


Q ss_pred             CCccEEEECCCCCC
Q 040531           91 GRLDILFNNAGVLG  104 (285)
Q Consensus        91 ~~id~lv~~ag~~~  104 (285)
                      ..+|+||+++|+..
T Consensus        67 ~~~d~vV~s~gi~~   80 (447)
T PRK02472         67 EDFDLMVKNPGIPY   80 (447)
T ss_pred             CcCCEEEECCCCCC
Confidence            14899999999853

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.64  E-value=0.00025  Score=61.37  Aligned_cols=76  Identities=18%  Similarity=0.289  Sum_probs=55.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++|+++|+|+ ||+|++++..|++.| .+|.+++|+.++.+++.+.+.... .+.   .+.    +.       .+..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~-------~~~~  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----EL-------QEEL  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cc-------hhcc
Confidence            678999999997 899999999999999 789999999998888877663211 111   111    11       1112


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+|||+....
T Consensus       184 ~~~DivInaTp~g  196 (278)
T PRK00258        184 ADFDLIINATSAG  196 (278)
T ss_pred             ccCCEEEECCcCC
Confidence            4689999987653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.60  E-value=0.0004  Score=59.86  Aligned_cols=75  Identities=19%  Similarity=0.273  Sum_probs=55.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+.+.+ .+.....|     +   .      ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~---~------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD-----E---L------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----h---h------cccC
Confidence            46899999999 699999999999999999999999988888877764322 22222111     1   0      1236


Q ss_pred             ccEEEECCCCC
Q 040531           93 LDILFNNAGVL  103 (285)
Q Consensus        93 id~lv~~ag~~  103 (285)
                      .|+||++.+..
T Consensus       179 ~DivInatp~g  189 (270)
T TIGR00507       179 VDLIINATSAG  189 (270)
T ss_pred             ccEEEECCCCC
Confidence            89999998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.47  E-value=0.00057  Score=55.33  Aligned_cols=78  Identities=22%  Similarity=0.295  Sum_probs=48.4

Q ss_pred             CCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH
Q 040531           13 LEGKIAIVTGG----------------ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE   76 (285)
Q Consensus        13 l~~k~vlItGa----------------s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~   76 (285)
                      |+||.||||+|                ||..|.++|+++..+|+.|+++..... +..        +..+..+  ++...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecch
Confidence            57899999987                478999999999999999999987642 111        2235444  45555


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCC
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~  104 (285)
                      +++.+.+.   +....-|++|++|++..
T Consensus        70 ~em~~~~~---~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   70 EEMLEAVK---ELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHHHH---HHGGGGSEEEE-SB--S
T ss_pred             hhhhhhhc---cccCcceeEEEecchhh
Confidence            55555544   44445699999998854

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.45  E-value=0.0017  Score=58.55  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=55.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++++.++|+|+ |.+|+.+++.+...|++|++++|+.++++.+....   +..   +..+..+.+.+.+.+       ..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------KR  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------cc
Confidence            57788999988 78999999999999999999999888766554433   111   223455555554443       35


Q ss_pred             ccEEEECCCCC
Q 040531           93 LDILFNNAGVL  103 (285)
Q Consensus        93 id~lv~~ag~~  103 (285)
                      .|++|+++++.
T Consensus       231 aDvVI~a~~~~  241 (370)
T TIGR00518       231 ADLLIGAVLIP  241 (370)
T ss_pred             CCEEEEccccC
Confidence            89999988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.44  E-value=0.00024  Score=58.35  Aligned_cols=49  Identities=31%  Similarity=0.465  Sum_probs=42.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+..++..+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            457899999999996 8999999999999999999999988777666543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.42  E-value=0.0018  Score=56.26  Aligned_cols=78  Identities=23%  Similarity=0.271  Sum_probs=56.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+.+........+...     +++..       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence            568899999997 6689999999999997 6999999999998888877543333322221     11111       12


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      ...|+|||+...
T Consensus       191 ~~aDiVInaTp~  202 (284)
T PRK12549        191 AAADGLVHATPT  202 (284)
T ss_pred             CCCCEEEECCcC
Confidence            358999999543

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.39  E-value=0.0025  Score=56.09  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=57.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .++++++|+|+++++|.+++..+...|++|++++++.++.+.+ ...   +..   ...|..+.+....+.+...  .+.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~~~--~~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GAD---YVIDYRKEDFVREVRELTG--KRG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC---eEEecCChHHHHHHHHHhC--CCC
Confidence            3688999999999999999999999999999999887765543 222   222   1235555555554443222  236


Q ss_pred             ccEEEECCC
Q 040531           93 LDILFNNAG  101 (285)
Q Consensus        93 id~lv~~ag  101 (285)
                      +|++++++|
T Consensus       236 ~d~~i~~~g  244 (342)
T cd08266         236 VDVVVEHVG  244 (342)
T ss_pred             CcEEEECCc
Confidence            999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.38  E-value=0.0027  Score=56.25  Aligned_cols=77  Identities=23%  Similarity=0.331  Sum_probs=52.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC--C
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG--R   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~--~   92 (285)
                      |+++||+||+||+|...+......|+.++++..++++.+ .+.++   +....   .|..+.+    +.+.+.+..+  .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~v---i~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHV---INYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999888899988777776666655 44444   33321   2333333    3444444332  5


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999998774

>PRK06849 hypothetical protein; Provisional

Probab=97.37  E-value=0.0021  Score=58.40  Aligned_cols=83  Identities=14%  Similarity=0.151  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +.|+|||||++..+|..+++.|.+.|++|++++.+..........+    .+...+...-.+.+...+.+.++.+++ ++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i   77 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-NI   77 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence            3689999999999999999999999999999998865543222222    123333223345454444444555554 58


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+||....
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99998765

>cd00704 MDH Malate dehydrogenase

Probab=97.37  E-value=0.0019  Score=57.09  Aligned_cols=112  Identities=12%  Similarity=0.068  Sum_probs=66.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHH--H--HHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDI--Q--NLI   83 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i--~--~~~   83 (285)
                      .+.||||+|.+|..++..|+..|.       .++++|+++  +.+              .....|+.+....  .  ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~--------------~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL--------------EGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc--------------ceeeeehhhhcccccCCcEEe
Confidence            579999999999999999998662       599999876  322              2333444443100  0  000


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC--CCceEEEEccc
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR--RSGCIISTASV  156 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~ii~vss~  156 (285)
                      ....+.....|++|+.||....     +  ..+   -.+.++.|+.-    ++.+.+.+.+.  ..+.+|++|-.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~-----~--g~t---R~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvsNP  128 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRK-----P--GME---RADLLRKNAKI----FKEQGEALNKVAKPTVKVLVVGNP  128 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCC-----c--CCc---HHHHHHHhHHH----HHHHHHHHHHhCCCCeEEEEeCCc
Confidence            1123334579999999997422     1  123   33456666554    44455544444  35677777643

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.36  E-value=0.0015  Score=57.73  Aligned_cols=115  Identities=14%  Similarity=0.115  Sum_probs=69.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHH--HHH--HH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQ--NLI--NV   85 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~--~~~--~~   85 (285)
                      ++.|+||+|.+|..++..|+..+.       .++++|+++...            +......|+.+.....  ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            378999999999999999998664       499999865531            1233344555543110  000  01


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC--CCceEEEEcccc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR--RSGCIISTASVA  157 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~ii~vss~~  157 (285)
                      ..+.....|++|+.||....          +.+++.+.++.|+.-.    +.+.+.+.+.  ..+.+|.+|...
T Consensus        69 ~~~~~~~aDiVVitAG~~~~----------~~~tr~~ll~~N~~i~----k~i~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRK----------EGMERRDLLSKNVKIF----KEQGRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCC----------CCCcHHHHHHHHHHHH----HHHHHHHHhhCCCCeEEEEeCCcH
Confidence            12344579999999997421          1223566777776544    4444444443  357777777533

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.35  E-value=0.0032  Score=54.59  Aligned_cols=81  Identities=25%  Similarity=0.355  Sum_probs=55.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++|+++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++.+.+....+.......|.   .+.....       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHHHHH-------
Confidence            467899999998 7889999999999996 588999999999888877643222211112222   2221111       


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+|||+....
T Consensus       193 ~~~divINaTp~G  205 (283)
T PRK14027        193 AAADGVVNATPMG  205 (283)
T ss_pred             hhcCEEEEcCCCC
Confidence            2589999987553

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.33  E-value=0.0067  Score=52.74  Aligned_cols=43  Identities=26%  Similarity=0.273  Sum_probs=37.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA   54 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~   54 (285)
                      .+++|++++|+|. |++|+++++.|...|++|++++|+.+....
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4788999999999 669999999999999999999998776544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.30  E-value=0.0031  Score=56.00  Aligned_cols=80  Identities=21%  Similarity=0.264  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|.+++|+||++++|..++..+...|++|+.++++.++.+.+.+.+   +.. .+  .|..+.++..+.+.+...  +.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~-~v--i~~~~~~~~~~~i~~~~~--~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD-DA--FNYKEEPDLDAALKRYFP--NGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc-ee--EEcCCcccHHHHHHHhCC--CCc
Confidence            5899999999999999999888889999999888877765554434   222 11  232222233333332221  469


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus       223 d~v~d~~g  230 (338)
T cd08295         223 DIYFDNVG  230 (338)
T ss_pred             EEEEECCC
Confidence            99999876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.25  E-value=0.00062  Score=64.23  Aligned_cols=48  Identities=35%  Similarity=0.463  Sum_probs=42.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3588999999999 59999999999999999999999988887777655

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.24  E-value=0.01  Score=52.37  Aligned_cols=120  Identities=13%  Similarity=0.111  Sum_probs=77.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      |++-+++.+.|+|+ |.+|.+++..++..|.  .++++|++++.++...-++....   .++... .  .+.+       
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~-------   69 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS-------   69 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-------
Confidence            45667889999998 9999999999999986  69999999888777776665422   222222 1  1211       


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                          .+..-|++|..||....     +  ..+.   .+.++.|..-...+.+.+..+   ...+.+++++-..
T Consensus        70 ----~~~~adivIitag~~~k-----~--g~~R---~dll~~N~~i~~~i~~~i~~~---~~~~~vivvsNP~  125 (315)
T PRK00066         70 ----DCKDADLVVITAGAPQK-----P--GETR---LDLVEKNLKIFKSIVGEVMAS---GFDGIFLVASNPV  125 (315)
T ss_pred             ----HhCCCCEEEEecCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCcH
Confidence                12479999999997422     1  2333   344666655444444433332   2367777777543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.20  E-value=0.0061  Score=54.51  Aligned_cols=80  Identities=21%  Similarity=0.253  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.++||+||+|++|..++......|++|+.++++.++.+.+.+++   +... ++  |..+.++..+.+.+..  .+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~-vi--~~~~~~~~~~~i~~~~--~~gv  229 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE-AF--NYKEEPDLDAALKRYF--PEGI  229 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCE-EE--ECCCcccHHHHHHHHC--CCCc
Confidence            5899999999999999999888888999998888777755444333   2221 12  3222222333333222  1369


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus       230 D~v~d~vG  237 (348)
T PLN03154        230 DIYFDNVG  237 (348)
T ss_pred             EEEEECCC
Confidence            99999877

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.19  E-value=0.0097  Score=51.03  Aligned_cols=145  Identities=15%  Similarity=0.250  Sum_probs=80.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhh-------------------HHHHHHhhcCCCc--eE
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAG-------------------IALADSLLSSSPL--VT   67 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~-------------------~~~~~~~~~~~~~--v~   67 (285)
                      +..|++.+|+|.|+ ||+|.++++.|++.| -++.++|.+.-..                   +...+.+.+.++.  +.
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~  103 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVT  103 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEE
Confidence            34578999999976 589999999999999 5688887542221                   1222333332333  22


Q ss_pred             EEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC
Q 040531           68 YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS  147 (285)
Q Consensus        68 ~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  147 (285)
                      .+. +.-+.+.+..++.      ...|+||.+....                         ..-..+.+.+.     +.+
T Consensus       104 ~i~-~~i~~e~~~~ll~------~~~D~VIdaiD~~-------------------------~~k~~L~~~c~-----~~~  146 (268)
T PRK15116        104 VVD-DFITPDNVAEYMS------AGFSYVIDAIDSV-------------------------RPKAALIAYCR-----RNK  146 (268)
T ss_pred             EEe-cccChhhHHHHhc------CCCCEEEEcCCCH-------------------------HHHHHHHHHHH-----HcC
Confidence            221 2222333333321      2466666654321                         01111222221     123


Q ss_pred             ceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCC-CCcE
Q 040531          148 GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK-YGIR  192 (285)
Q Consensus       148 g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~~i~  192 (285)
                      -.+|..++.++.......-.=..+|.-..-|++.+.++|.+ +||+
T Consensus       147 ip~I~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        147 IPLVTTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             CCEEEECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            44666655554433222334567788889999999999987 6774

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.18  E-value=0.0022  Score=55.62  Aligned_cols=79  Identities=14%  Similarity=0.152  Sum_probs=54.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++|.++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.+... ..+  ..  +...+++..       ..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~-~~~--~~--~~~~~~~~~-------~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV-GVI--TR--LEGDSGGLA-------IE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc-Ccc--ee--ccchhhhhh-------cc
Confidence            468999999976 8889999999999996 5999999999988888766321 111  11  111112211       12


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+|||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4689999987653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.07  E-value=0.014  Score=54.62  Aligned_cols=112  Identities=17%  Similarity=0.134  Sum_probs=71.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH-------------HHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE-------------QDI   79 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~-------------~~i   79 (285)
                      ..+.+|+|+|+ |.+|...+..+...|+.|+++|+++++++...+ +   +.++.  ..|..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~~v--~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAEFL--ELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEE--EeccccccccccchhhhcchhHH
Confidence            46889999987 578999999999999999999999988664443 3   33322  2232221             111


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           80 QNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        80 ~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ++..+.+.+..+..|++|.++|+....                       ++..+.+..+..|+  ++|+|+.++..
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg~~-----------------------aP~lit~~~v~~mk--pGgvIVdvg~~  287 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPGKP-----------------------APKLITAEMVASMK--PGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCccc-----------------------CcchHHHHHHHhcC--CCCEEEEEccC
Confidence            222222233335699999999975321                       12223466677774  56888888763

>PRK14968 putative methyltransferase; Provisional

Probab=97.07  E-value=0.012  Score=47.37  Aligned_cols=122  Identities=17%  Similarity=0.167  Sum_probs=73.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCc---eEEEeccCCCHHHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL---VTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      -+++++|-.|++.|.   ++..+++.+.+++.++++++......+.+...+.+   +.++.+|+.+.         +.+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            367889999987765   56666666899999999988877776666543322   78888887542         111 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhH---HHHHHHHHHhhcCCCCceEEEEcc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA---ALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~---~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                       ..+|.++.|..+...    .+.... .+.+...+.....+.   -.+++.+.+.++  ..|.++++.+
T Consensus        89 -~~~d~vi~n~p~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk--~gG~~~~~~~  149 (188)
T PRK14968         89 -DKFDVILFNPPYLPT----EEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLK--PGGRILLLQS  149 (188)
T ss_pred             -cCceEEEECCCcCCC----Cchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcC--CCeEEEEEEc
Confidence             269999999876432    111111 112222222222222   235677777774  4566665543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.07  E-value=0.0072  Score=53.21  Aligned_cols=103  Identities=21%  Similarity=0.220  Sum_probs=58.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHH-C--CCeEEEEecCchhhHHHHHHhhcCCCceEEEec-cCCCHHHHHHHHHHHHHHcC
Q 040531           16 KIAIVTGGARGIGEATVRLFVK-H--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHC-DVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~-~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~-D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +.++|+||+|+||.+++..+.. .  ++.++++++++.. ....-.+... .....+.. +-.+   +       .+...
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~-~~~~~i~~~~~~d---~-------~~~l~   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHI-PTAVKIKGFSGED---P-------TPALE   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcC-CCCceEEEeCCCC---H-------HHHcC
Confidence            4689999999999999998865 2  3568888887432 1111112111 11112222 1111   1       11223


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHH
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAK  140 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (285)
                      ..|++|.++|....     +  ..+   -.+.+..|+...-.+.+.+.+
T Consensus        69 ~~DiVIitaG~~~~-----~--~~~---R~dll~~N~~i~~~ii~~i~~  107 (312)
T PRK05086         69 GADVVLISAGVARK-----P--GMD---RSDLFNVNAGIVKNLVEKVAK  107 (312)
T ss_pred             CCCEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHH
Confidence            69999999997532     1  112   345577777666666666544

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.05  E-value=0.0019  Score=55.98  Aligned_cols=79  Identities=19%  Similarity=0.238  Sum_probs=64.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      -..++|-||+|-.|.-++++|+++|.+.++.+|+..++..+..++   +++...+.+++  ++.++++++       ..+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~   73 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQ   73 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cce
Confidence            456899999999999999999999999999999999999998888   55555555555  555555544       689


Q ss_pred             EEEECCCCCCC
Q 040531           95 ILFNNAGVLGN  105 (285)
Q Consensus        95 ~lv~~ag~~~~  105 (285)
                      +|+||+|.+..
T Consensus        74 VVlncvGPyt~   84 (382)
T COG3268          74 VVLNCVGPYTR   84 (382)
T ss_pred             EEEeccccccc
Confidence            99999997654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.04  E-value=0.026  Score=49.29  Aligned_cols=42  Identities=24%  Similarity=0.226  Sum_probs=36.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .++.+++++|.|. |++|+.++..|...|++|.+++|+.+...
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            3578999999997 67999999999999999999999876543

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.04  E-value=0.027  Score=43.47  Aligned_cols=113  Identities=19%  Similarity=0.207  Sum_probs=72.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcC---C-CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSS---S-PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~---~-~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+.|+|++|.+|.+++..|...+  ..++++|++++.++....++...   . ........|.   +           ..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~---~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDY---E-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSG---G-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccc---c-----------cc
Confidence            58899999999999999999887  45999999988777666655431   1 2233333222   2           23


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ..-|++|..||....       ...+   -.+.++.|+.-.-.+.+.+.+.-   ..+.++.++..
T Consensus        68 ~~aDivvitag~~~~-------~g~s---R~~ll~~N~~i~~~~~~~i~~~~---p~~~vivvtNP  120 (141)
T PF00056_consen   68 KDADIVVITAGVPRK-------PGMS---RLDLLEANAKIVKEIAKKIAKYA---PDAIVIVVTNP  120 (141)
T ss_dssp             TTESEEEETTSTSSS-------TTSS---HHHHHHHHHHHHHHHHHHHHHHS---TTSEEEE-SSS
T ss_pred             ccccEEEEecccccc-------cccc---HHHHHHHhHhHHHHHHHHHHHhC---CccEEEEeCCc
Confidence            468999999997422       1123   34556777665555555554432   45667766543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.03  E-value=0.0054  Score=54.59  Aligned_cols=82  Identities=22%  Similarity=0.433  Sum_probs=57.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---------------------hhhHHHHHHhhcCCC--c
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD---------------------AAGIALADSLLSSSP--L   65 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~---------------------~~~~~~~~~~~~~~~--~   65 (285)
                      ...|++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                     .+.+.+.+.+.+.++  +
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~   97 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE   97 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence            44688999999997 6799999999999997 688888763                     233444455554433  4


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 040531           66 VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNA  100 (285)
Q Consensus        66 v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~a  100 (285)
                      +..+..|++. +.+++++       ...|++|.+.
T Consensus        98 i~~~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (338)
T PRK12475         98 IVPVVTDVTV-EELEELV-------KEVDLIIDAT  124 (338)
T ss_pred             EEEEeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence            6667777753 3444432       3589888864

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.03  E-value=0.0036  Score=57.21  Aligned_cols=76  Identities=13%  Similarity=0.216  Sum_probs=55.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++++++|.|+ ||+|+.++..|+..|. .+.++.|+.++.+.+.+.+..    ...+  +   .++..+       .
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~~--~---~~~l~~-------~  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASAH--Y---LSELPQ-------L  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeEe--c---HHHHHH-------H
Confidence            3688999999999 9999999999999995 599999998888777766521    1111  1   122222       2


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                      ....|+||++.+..
T Consensus       240 l~~aDiVI~aT~a~  253 (414)
T PRK13940        240 IKKADIIIAAVNVL  253 (414)
T ss_pred             hccCCEEEECcCCC
Confidence            34689999998764

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.02  E-value=0.017  Score=50.79  Aligned_cols=114  Identities=15%  Similarity=0.154  Sum_probs=71.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +.+.|.|+ |++|++++..|+..|  .++++++++.+..+.....+...    ....... .  .+.++           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36788896 899999999999999  57999999998888777766432    1122222 1  22221           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ....|++|+++|....     +  ..+.   .+.++.|..=.-.+.+.+.+.   ...+.++++|...
T Consensus        66 l~~aDIVIitag~~~~-----~--g~~R---~dll~~N~~i~~~~~~~i~~~---~~~~~vivvsNP~  120 (306)
T cd05291          66 CKDADIVVITAGAPQK-----P--GETR---LDLLEKNAKIMKSIVPKIKAS---GFDGIFLVASNPV  120 (306)
T ss_pred             hCCCCEEEEccCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEecChH
Confidence            1468999999987421     1  2233   344666655444444444332   2367777777544

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.00  E-value=0.17  Score=43.42  Aligned_cols=238  Identities=13%  Similarity=0.055  Sum_probs=131.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHH-HCCCeEEEEe--c-----Cc-----hhhHHHHHHhhcCCCceEEEeccCCCHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFV-KHGAKVVIAD--I-----DD-----AAGIALADSLLSSSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la-~~g~~v~~~~--r-----~~-----~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~   81 (285)
                      -|.|||.|+|+|-|++.-...+ ..|+..+.+.  |     ++     -....+.+...+.+--..-+..|.-+.+--+.
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            5789999999999987544333 2455544432  1     11     11112223333334445678889888888888


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCC-CCCCC-----------------------------CCCCCCHHHHHHHHHhhhhhH
Q 040531           82 LINVTISKHGRLDILFNNAGVLGN-QSKHK-----------------------------SITDFDANEFDNIIRINVRGA  131 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~~-~~~~~-----------------------------~~~~~~~~~~~~~~~~n~~~~  131 (285)
                      +++.|...+|.+|.+|+.-+.... .+..+                             .++..+.+++.+...  |.|-
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VMGG  198 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VMGG  198 (398)
T ss_pred             HHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hhCc
Confidence            899999999999999987443322 11111                             112223333333322  2222


Q ss_pred             --H-HHHHHHHHhhcCCCCceEEEEcccccccCCCC--CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          132 --A-LGMKYAAKVMVPRRSGCIISTASVASLMGGLG--PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       132 --~-~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~--~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                        | .++.+++..-.-..+.+-+..|-++.....|-  ..+.+.+|.=++.-++.+...|+..+=..+....=.+-|...
T Consensus       199 eDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqAS  278 (398)
T COG3007         199 EDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQAS  278 (398)
T ss_pred             chHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhhh
Confidence              1 13444444322244567777777665544432  346789999999999999999987755555444333444332


Q ss_pred             hhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          207 VNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ... +.             .+-.+.-+++-    ++.-.+.|-+.+.+..|.++.-  -.|+.+.+|.
T Consensus       279 saI-P~-------------~plYla~lfkv----MKekg~HEgcIeQi~rlfse~l--y~g~~~~~D~  326 (398)
T COG3007         279 SAI-PM-------------MPLYLAILFKV----MKEKGTHEGCIEQIDRLFSEKL--YSGSKIQLDD  326 (398)
T ss_pred             hcc-cc-------------ccHHHHHHHHH----HHHcCcchhHHHHHHHHHHHHh--hCCCCCCcCc
Confidence            211 11             00111111111    1223466778888888886642  2477777764

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.99  E-value=0.015  Score=54.28  Aligned_cols=84  Identities=18%  Similarity=0.180  Sum_probs=58.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-------------HHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-------------EQDI   79 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-------------~~~i   79 (285)
                      +.+.+++|.|+ |.+|...+..+...|+.|++++++.++++...+ +   +  ..++..|..+             .+..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---G--a~~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---G--AEFLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C--CeEEeccccccccccccceeecCHHHH
Confidence            45679999996 899999999999999999999998887554432 3   2  2333444321             2334


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCC
Q 040531           80 QNLINVTISKHGRLDILFNNAGVL  103 (285)
Q Consensus        80 ~~~~~~i~~~~~~id~lv~~ag~~  103 (285)
                      +...+.+.+.....|++|+++-+.
T Consensus       235 ~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECcccC
Confidence            444444555567899999998543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.95  E-value=0.013  Score=51.75  Aligned_cols=73  Identities=19%  Similarity=0.250  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|++++|+|++ |+|.-.++.....|++|+.++|++++++.+.+ +   +... +  .|.++.+..+.+-+       ..
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l---GAd~-~--i~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L---GADH-V--INSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h---CCcE-E--EEcCCchhhHHhHh-------hC
Confidence            59999999999 99988777776799999999999998655443 3   2222 2  23334444444322       28


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+++
T Consensus       231 d~ii~tv~  238 (339)
T COG1064         231 DAIIDTVG  238 (339)
T ss_pred             cEEEECCC
Confidence            99999877

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.94  E-value=0.022  Score=50.35  Aligned_cols=146  Identities=10%  Similarity=-0.003  Sum_probs=91.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCchh--hHHHHHHhhcCC----CceEEEeccCCCHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDAA--GIALADSLLSSS----PLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~   81 (285)
                      -+.+.|+||+|.+|.+++..|+..|.       .++++|.++..  ++...-.+....    .++.+ .  -.+      
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~------   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDP------   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCc------
Confidence            35789999999999999999998874       79999985443  333333332111    11111 1  111      


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccc
Q 040531           82 LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASL  159 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~  159 (285)
                           .+....-|++|..||....     +  ..+.   .+.++.|+.=    ++.+.+.+.+..  .+.+|.+|.....
T Consensus        73 -----~~~~~daDivvitaG~~~k-----~--g~tR---~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPvD~  133 (322)
T cd01338          73 -----NVAFKDADWALLVGAKPRG-----P--GMER---ADLLKANGKI----FTAQGKALNDVASRDVKVLVVGNPCNT  133 (322)
T ss_pred             -----HHHhCCCCEEEEeCCCCCC-----C--CCcH---HHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEecCcHHH
Confidence                 1223478999999997421     1  2233   3346666544    445555444433  6777777754322


Q ss_pred             --------c-CCCCCccchhhHHHHHHHHHHHHHHhCC
Q 040531          160 --------M-GGLGPHAYTVSKHAIVGLTKNTACELGK  188 (285)
Q Consensus       160 --------~-~~~~~~~Y~asKaa~~~l~~~la~e~~~  188 (285)
                              . +.|....|+.++.--..|...+++.+.-
T Consensus       134 ~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         134 NALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence                    2 2566668999999999999999998753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.90  E-value=0.017  Score=48.86  Aligned_cols=104  Identities=20%  Similarity=0.273  Sum_probs=66.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      -++++++|+|+++ +|++++..+...|.+|+++++++++.+.+ ...   +.. .  ..|..+.+....+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~--~~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GAD-H--VIDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCc-e--eccCCcCCHHHHHH---HhcCCC
Confidence            3688999999999 99999999989999999999887664443 222   211 1  12333333333322   223357


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      +|+++++++..                             ...+..++.+  +..|+++.++....
T Consensus       202 ~d~vi~~~~~~-----------------------------~~~~~~~~~l--~~~G~~v~~~~~~~  236 (271)
T cd05188         202 ADVVIDAVGGP-----------------------------ETLAQALRLL--RPGGRIVVVGGTSG  236 (271)
T ss_pred             CCEEEECCCCH-----------------------------HHHHHHHHhc--ccCCEEEEEccCCC
Confidence            99999987631                             1234445555  35689998877643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=96.85  E-value=0.0093  Score=49.25  Aligned_cols=209  Identities=17%  Similarity=0.096  Sum_probs=123.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+.+++-.+.++-|+.+..|.++++.-...+.+|.++.|+..  .+..++.   ...+.+++.|.-...-.+..      
T Consensus        46 ~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw---~~~vswh~gnsfssn~~k~~------  114 (283)
T KOG4288|consen   46 DKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSW---PTYVSWHRGNSFSSNPNKLK------  114 (283)
T ss_pred             chhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCC---CcccchhhccccccCcchhh------
Confidence            344566677899999999999999999999999999998866  2333322   45577777776442211111      


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                       ..++..++-++|.++.              ...+..+|=.......+++..    .+-.+++++|....-.+.--...|
T Consensus       115 -l~g~t~v~e~~ggfgn--------------~~~m~~ing~ani~a~kaa~~----~gv~~fvyISa~d~~~~~~i~rGY  175 (283)
T KOG4288|consen  115 -LSGPTFVYEMMGGFGN--------------IILMDRINGTANINAVKAAAK----AGVPRFVYISAHDFGLPPLIPRGY  175 (283)
T ss_pred             -hcCCcccHHHhcCccc--------------hHHHHHhccHhhHHHHHHHHH----cCCceEEEEEhhhcCCCCccchhh
Confidence             1245566666665422              233444555555555666533    456789999875432222223368


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh----------
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA----------  238 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  238 (285)
                      =-+|.+.+.=..      ..++.|-..++||+|+..  +.....       ..+.....+.+........          
T Consensus       176 ~~gKR~AE~Ell------~~~~~rgiilRPGFiyg~--R~v~g~-------~~pL~~vg~pl~~~~~~a~k~~~kLp~lg  240 (283)
T KOG4288|consen  176 IEGKREAEAELL------KKFRFRGIILRPGFIYGT--RNVGGI-------KSPLHTVGEPLEMVLKFALKPLNKLPLLG  240 (283)
T ss_pred             hccchHHHHHHH------HhcCCCceeeccceeecc--cccCcc-------cccHHhhhhhHHHHHHhhhchhhcCcccc
Confidence            888887764221      234567788999999876  222111       1122222222222222211          


Q ss_pred             cccCCCCCHHHHHHHHHHHhcCCC
Q 040531          239 NLKGVTLKARDIAEAALYLASDES  262 (285)
Q Consensus       239 ~~~~~~~~~eeva~~~~~l~s~~~  262 (285)
                      ......+..|++|.+++..++++.
T Consensus       241 ~l~~ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  241 PLLAPPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             cccCCCcCHHHHHHHHHHhccCCC
Confidence            112234678999999999887753

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.83  E-value=0.0057  Score=51.24  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=56.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.++|.|++ -+|+.+|+.|.++|++|++++++++...+....    ......+.+|-++++.+.++=      ....|+
T Consensus         1 m~iiIiG~G-~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~ag------i~~aD~   69 (225)
T COG0569           1 MKIIIIGAG-RVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAG------IDDADA   69 (225)
T ss_pred             CEEEEECCc-HHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcC------CCcCCE
Confidence            356677765 569999999999999999999999987774431    124788999999988877661      125777


Q ss_pred             EEECCC
Q 040531           96 LFNNAG  101 (285)
Q Consensus        96 lv~~ag  101 (285)
                      +|...|
T Consensus        70 vva~t~   75 (225)
T COG0569          70 VVAATG   75 (225)
T ss_pred             EEEeeC
Confidence            777655

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.83  E-value=0.0045  Score=53.56  Aligned_cols=38  Identities=26%  Similarity=0.390  Sum_probs=35.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID   48 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~   48 (285)
                      .+++||.++|.|+++-.|++++..|+++|++|.++.|+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            47899999999999999999999999999999998874

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.81  E-value=0.028  Score=47.24  Aligned_cols=149  Identities=19%  Similarity=0.258  Sum_probs=83.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCch-------------------hhHHHHHHhhcCCCc--eE
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDA-------------------AGIALADSLLSSSPL--VT   67 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~-------------------~~~~~~~~~~~~~~~--v~   67 (285)
                      +..|++.+++|.|. ||+|.++++.|++.|. ++.++|.+.-                   +.+...+.+.+.++.  +.
T Consensus         6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~   84 (231)
T cd00755           6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVD   84 (231)
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEE
Confidence            34578889999986 5899999999999996 5888775432                   222233333333332  33


Q ss_pred             EEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC
Q 040531           68 YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS  147 (285)
Q Consensus        68 ~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  147 (285)
                      .+...++ .+....++.      ...|+||.+..-.                         ..-..+.+.+..     .+
T Consensus        85 ~~~~~i~-~~~~~~l~~------~~~D~VvdaiD~~-------------------------~~k~~L~~~c~~-----~~  127 (231)
T cd00755          85 AVEEFLT-PDNSEDLLG------GDPDFVVDAIDSI-------------------------RAKVALIAYCRK-----RK  127 (231)
T ss_pred             EeeeecC-HhHHHHHhc------CCCCEEEEcCCCH-------------------------HHHHHHHHHHHH-----hC
Confidence            3433333 233333221      2467777653311                         011112232222     22


Q ss_pred             ceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcE--EEEE
Q 040531          148 GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR--VNCI  196 (285)
Q Consensus       148 g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~--v~~v  196 (285)
                      -.+|...+.++.........-..+|.-..-|++.+.++|.+.||+  +.+|
T Consensus       128 ip~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v  178 (231)
T cd00755         128 IPVISSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVV  178 (231)
T ss_pred             CCEEEEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEE
Confidence            345555554443322223344567777889999999999988875  4444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.80  E-value=0.0095  Score=51.82  Aligned_cols=81  Identities=22%  Similarity=0.286  Sum_probs=52.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---hhhHHHHHHhhcCCC-ceEEEeccCCCHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD---AAGIALADSLLSSSP-LVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++++|+++|.|+ ||-+++++..|+..|. ++.++.|+.   ++.+++.+.+..... .+.+.  ++.+.+.+       
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l-------  190 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAF-------  190 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhh-------
Confidence            578999999997 5559999999999996 699999985   466666666532211 12221  22111111       


Q ss_pred             HHHcCCccEEEECCCC
Q 040531           87 ISKHGRLDILFNNAGV  102 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~  102 (285)
                      .+.....|+|||+...
T Consensus       191 ~~~~~~aDivINaTp~  206 (288)
T PRK12749        191 AEALASADILTNGTKV  206 (288)
T ss_pred             hhhcccCCEEEECCCC
Confidence            1122468999998654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.78  E-value=0.0055  Score=52.93  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=57.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.+++.++|.||+ |-+++++..|++.|. +++++.|+.++.+++.+.+.+.+..+..  .+..+.+...         
T Consensus       122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~---------  189 (283)
T COG0169         122 VDVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE---------  189 (283)
T ss_pred             cccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc---------
Confidence            45678999999975 569999999999995 6999999999999998887554332211  2222222111         


Q ss_pred             cCCccEEEECCCCCCC
Q 040531           90 HGRLDILFNNAGVLGN  105 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~  105 (285)
                        ..|+|||+......
T Consensus       190 --~~dliINaTp~Gm~  203 (283)
T COG0169         190 --EADLLINATPVGMA  203 (283)
T ss_pred             --ccCEEEECCCCCCC
Confidence              48999999876533

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.78  E-value=0.0085  Score=52.06  Aligned_cols=79  Identities=20%  Similarity=0.344  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++++++|+|+++++|+.++..+...|+.|++++++.+..+.+ ..+   +..   ...|..+.+....+.+ ... .+.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~-~~~~  209 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKE-ATG-GRGV  209 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHH-HhC-CCCe
Confidence            688999999999999999999999999999999887765544 322   222   1234443333333322 221 2469


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |.+++++|
T Consensus       210 d~vi~~~g  217 (323)
T cd05276         210 DVILDMVG  217 (323)
T ss_pred             EEEEECCc
Confidence            99999887

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.74  E-value=0.011  Score=51.82  Aligned_cols=75  Identities=23%  Similarity=0.309  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+.+++|+||++++|+++++.+...|++|+.+.++.++.+.+ ..+   +.. .++  |.   ++..+.   +. +...+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---~~~-~~~--~~---~~~~~~---~~-~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KEL---GAD-YVI--DG---SKFSED---VK-KLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHc---CCc-EEE--ec---HHHHHH---HH-hccCC
Confidence            578999999999999999999999999999998877664443 222   221 111  22   112222   22 22379


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.72  E-value=0.014  Score=47.97  Aligned_cols=83  Identities=22%  Similarity=0.300  Sum_probs=54.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC-------------------chhhHHHHHHhhcCCCc--eE
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID-------------------DAAGIALADSLLSSSPL--VT   67 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~~--v~   67 (285)
                      +..+++++++|.| .||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+..+.  +.
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~   94 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVT   94 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence            4568999999998 56999999999999996 68888876                   23444445555544443  44


Q ss_pred             EEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 040531           68 YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        68 ~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag  101 (285)
                      .+..++.+ +.+.++       +...|++|.+..
T Consensus        95 ~~~~~i~~-~~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356        95 ALKERVTA-ENLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             EehhcCCH-HHHHHH-------HhCCCEEEECCC
Confidence            44444432 333332       236888888643

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.72  E-value=0.014  Score=51.99  Aligned_cols=82  Identities=23%  Similarity=0.418  Sum_probs=55.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---------------------hhhHHHHHHhhcCCC--c
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD---------------------AAGIALADSLLSSSP--L   65 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~---------------------~~~~~~~~~~~~~~~--~   65 (285)
                      +..|++++|+|.|+ ||||..++..|+..|. ++.++|.+.                     .+.+.+.+.+.+.++  +
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~   97 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVR   97 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcE
Confidence            34688999999998 7999999999999997 699988753                     223333444443333  4


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 040531           66 VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNA  100 (285)
Q Consensus        66 v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~a  100 (285)
                      +..+..|++. +.+..++       ...|++|.+.
T Consensus        98 v~~~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (339)
T PRK07688         98 VEAIVQDVTA-EELEELV-------TGVDLIIDAT  124 (339)
T ss_pred             EEEEeccCCH-HHHHHHH-------cCCCEEEEcC
Confidence            5666667753 3333332       3578888864

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.72  E-value=0.01  Score=52.69  Aligned_cols=77  Identities=18%  Similarity=0.211  Sum_probs=51.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .++||+||+|++|..++......|+ .|+.+++++++.+.+.+++   +... ++  |..+ ++..+.+.++..  +.+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~-vi--~~~~-~~~~~~i~~~~~--~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA-AI--NYKT-DNVAERLRELCP--EGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE-EE--ECCC-CCHHHHHHHHCC--CCce
Confidence            8999999999999999887778898 7999988877765554434   2221 12  2222 222222332221  4699


Q ss_pred             EEEECCC
Q 040531           95 ILFNNAG  101 (285)
Q Consensus        95 ~lv~~ag  101 (285)
                      +++.+.|
T Consensus       227 ~vid~~g  233 (345)
T cd08293         227 VYFDNVG  233 (345)
T ss_pred             EEEECCC
Confidence            9999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.69  E-value=0.012  Score=52.54  Aligned_cols=78  Identities=23%  Similarity=0.304  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-cCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-HGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~~~   92 (285)
                      +|+.+||.||+||+|.+.++-....|+..+++.++.+.. ++.+++   +..   ...|..+.+-++.    +.+. .++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l---GAd---~vvdy~~~~~~e~----~kk~~~~~  225 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL---GAD---EVVDYKDENVVEL----IKKYTGKG  225 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc---CCc---EeecCCCHHHHHH----HHhhcCCC
Confidence            688999999999999999988888885666666566553 344444   222   2357776333333    2222 568


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|+|+.+.|.
T Consensus       226 ~DvVlD~vg~  235 (347)
T KOG1198|consen  226 VDVVLDCVGG  235 (347)
T ss_pred             ccEEEECCCC
Confidence            9999999885

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.69  E-value=0.0049  Score=52.58  Aligned_cols=75  Identities=12%  Similarity=0.228  Sum_probs=54.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.++|+|||+- |+.++++|.++|+.|+...++....+...+     .+ ...+..+.-+.+++..++.+     ..+|+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----~g-~~~v~~g~l~~~~l~~~l~~-----~~i~~   68 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----HQ-ALTVHTGALDPQELREFLKR-----HSIDI   68 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----cC-CceEEECCCCHHHHHHHHHh-----cCCCE
Confidence            36999999998 999999999999999998887765433321     11 22345666677776666542     36999


Q ss_pred             EEECCCC
Q 040531           96 LFNNAGV  102 (285)
Q Consensus        96 lv~~ag~  102 (285)
                      ||+.+..
T Consensus        69 VIDAtHP   75 (256)
T TIGR00715        69 LVDATHP   75 (256)
T ss_pred             EEEcCCH
Confidence            9997654

This enzyme was found to be a monomer by gel filtration.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.69  E-value=0.0026  Score=42.88  Aligned_cols=36  Identities=28%  Similarity=0.491  Sum_probs=24.0

Q ss_pred             CCC-cEEEEecCCCchhHH--HHHHHHHCCCeEEEEecCc
Q 040531           13 LEG-KIAIVTGGARGIGEA--TVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        13 l~~-k~vlItGas~gIG~~--ia~~la~~g~~v~~~~r~~   49 (285)
                      ++| |+|||+|+|+|.|++  |+..| ..|+..+.++...
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            455 899999999999999  66666 6788887776543

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.68  E-value=0.014  Score=53.90  Aligned_cols=80  Identities=21%  Similarity=0.200  Sum_probs=55.9

Q ss_pred             ccCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC
Q 040531           11 KTLEGKIAIVTGG----------------ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS   74 (285)
Q Consensus        11 ~~l~~k~vlItGa----------------s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s   74 (285)
                      .+|+||.+|||+|                ||-.|.++|+++..+|++|.+++-... +        .....+.++.  +.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~--------~~p~~v~~i~--V~  320 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L--------ADPQGVKVIH--VE  320 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C--------CCCCCceEEE--ec
Confidence            4699999999998                477999999999999999999875332 1        1123355554  33


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 040531           75 LEQDIQNLINVTISKHGRLDILFNNAGVLGN  105 (285)
Q Consensus        75 ~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~  105 (285)
                      ..++   +.+.+.+.+. .|++|++|.+...
T Consensus       321 ta~e---M~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        321 SARQ---MLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             CHHH---HHHHHHhhCC-CCEEEEeccccce
Confidence            3344   4444444444 7999999988543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.67  E-value=0.01  Score=43.91  Aligned_cols=71  Identities=17%  Similarity=0.161  Sum_probs=53.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILF   97 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv   97 (285)
                      ++|.|.+ .+|+.+++.|.+.+..|++++++++..+++.+..      +.++.+|.++.+.++++-      ....+.+|
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~------~~~i~gd~~~~~~l~~a~------i~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG------VEVIYGDATDPEVLERAG------IEKADAVV   67 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT------SEEEES-TTSHHHHHHTT------GGCESEEE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc------cccccccchhhhHHhhcC------ccccCEEE
Confidence            4677775 7999999999997779999999988866655432      778999999998887651      13677777


Q ss_pred             ECCC
Q 040531           98 NNAG  101 (285)
Q Consensus        98 ~~ag  101 (285)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            7543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.64  E-value=0.0096  Score=52.50  Aligned_cols=79  Identities=22%  Similarity=0.245  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.++||+||++++|..++......|++|+.++++.++.+.+ .++   +... +  .|..+.+...+.++...  .+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~~-v--i~~~~~~~~~~~~~~~~--~~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFDV-A--FNYKTVKSLEETLKKAS--PDGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCE-E--EeccccccHHHHHHHhC--CCCe
Confidence            588999999999999999888888899999998887765444 333   3222 1  22222223333333221  1369


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus       209 dvv~d~~G  216 (325)
T TIGR02825       209 DCYFDNVG  216 (325)
T ss_pred             EEEEECCC
Confidence            99999876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.56  E-value=0.046  Score=48.64  Aligned_cols=77  Identities=23%  Similarity=0.303  Sum_probs=51.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .++++++|+|+ |++|...+..+...|+ .|+++++++++++.+. ++   +... +  .|..+ +++.+    +.+..+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~-v--i~~~~-~~~~~----~~~~~g  234 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADK-L--VNPQN-DDLDH----YKAEKG  234 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcE-E--ecCCc-ccHHH----HhccCC
Confidence            36899999986 8999999988888898 5888898887765443 33   3222 1  23333 22222    222235


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|+++.++|.
T Consensus       235 ~~D~vid~~G~  245 (343)
T PRK09880        235 YFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.56  E-value=0.014  Score=53.75  Aligned_cols=74  Identities=20%  Similarity=0.341  Sum_probs=53.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++.+++++|.|+ |.+|+.+++.|...|+ .|++++|+.++...+.+.+.   ..  ++     +.++..+.+       
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~~--~~-----~~~~~~~~l-------  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---GE--AI-----PLDELPEAL-------  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---Cc--Ee-----eHHHHHHHh-------
Confidence            578999999987 9999999999999997 69999999888777766542   11  11     122332222       


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|++|.+.|..
T Consensus       241 ~~aDvVI~aT~s~  253 (423)
T PRK00045        241 AEADIVISSTGAP  253 (423)
T ss_pred             ccCCEEEECCCCC
Confidence            3579999987653

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.56  E-value=0.0066  Score=48.35  Aligned_cols=39  Identities=23%  Similarity=0.397  Sum_probs=35.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++||+++|+|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            479999999999977789999999999999999999864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.56  E-value=0.011  Score=54.71  Aligned_cols=57  Identities=19%  Similarity=0.177  Sum_probs=42.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDI   79 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i   79 (285)
                      .++|.|+ |.+|+++++.|.++|+.|++++++++..+.+.+..     .+.++.+|.++.+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l   58 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVL   58 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHH
Confidence            6888887 99999999999999999999999988776654321     244455555554433

>PRK04148 hypothetical protein; Provisional

Probab=96.47  E-value=0.0088  Score=45.53  Aligned_cols=56  Identities=14%  Similarity=0.074  Sum_probs=45.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~   77 (285)
                      +++.+++.|.+  -|.++|..|++.|+.|+.+|.++...+...+.      .+.++.+|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            56789999988  67888999999999999999999976655443      3678888888754

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.46  E-value=0.017  Score=58.30  Aligned_cols=78  Identities=9%  Similarity=0.172  Sum_probs=62.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-Ce-------------EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG-AK-------------VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD   78 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~   78 (285)
                      -+.|.++|.|+ |.+|+.+++.|++.. +.             |.+++++.+..+++.+..    +++..++.|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence            45779999997 999999999999763 33             888899888877766643    356789999999988


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCC
Q 040531           79 IQNLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~  102 (285)
                      +.++++       .+|+||++...
T Consensus       642 L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc-------CCCEEEECCCc
Confidence            877655       59999998765

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.46  E-value=0.02  Score=51.85  Aligned_cols=82  Identities=20%  Similarity=0.323  Sum_probs=54.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC-------------------chhhHHHHHHhhcCCCc--eEE
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID-------------------DAAGIALADSLLSSSPL--VTY   68 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~~--v~~   68 (285)
                      ..+++++|+|.|+ ||+|.+++..|+..|. ++.++|++                   ..+.+.+.+.+.+..+.  +..
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  209 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEA  209 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            4578889999966 7899999999999997 58888876                   34455555566554443  344


Q ss_pred             EeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 040531           69 LHCDVSLEQDIQNLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        69 ~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag  101 (285)
                      +...+++ +.+..++       ...|+||++..
T Consensus       210 ~~~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        210 VQERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             EeccCCh-HHHHHHH-------hCCCEEEECCC
Confidence            4444432 3333332       25788888653

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.44  E-value=0.0072  Score=56.38  Aligned_cols=48  Identities=23%  Similarity=0.320  Sum_probs=41.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            3578999999996 69999999999999999999999888777666543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.43  E-value=0.028  Score=42.34  Aligned_cols=76  Identities=12%  Similarity=0.202  Sum_probs=53.8

Q ss_pred             EEEEecCCCchhHHHHHHHHH-CCCeEE-EEecCc----------------------hhhHHHHHHhhcCCCceEEEecc
Q 040531           17 IAIVTGGARGIGEATVRLFVK-HGAKVV-IADIDD----------------------AAGIALADSLLSSSPLVTYLHCD   72 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~-~g~~v~-~~~r~~----------------------~~~~~~~~~~~~~~~~v~~~~~D   72 (285)
                      .++|.|++|.+|+.+++.+.+ .+.+++ .++|+.                      ..+++..+.     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            589999999999999999998 677754 456665                      222222222     12   5679


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 040531           73 VSLEQDIQNLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        73 ~s~~~~i~~~~~~i~~~~~~id~lv~~ag~  102 (285)
                      +|.++.+...++...+.  ++.+|+-..|+
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999998887776  68889988885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.43  E-value=0.022  Score=52.32  Aligned_cols=74  Identities=24%  Similarity=0.431  Sum_probs=54.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++++++|.|+ |.+|+.+++.|...| ..|++++|+.++..++.+.+.   ..  .+..     ++..+.+       
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g---~~--~i~~-----~~l~~~l-------  238 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG---GE--AVKF-----EDLEEYL-------  238 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Ce--EeeH-----HHHHHHH-------
Confidence            578999999997 999999999999999 679999999887776666542   11  2211     2333333       


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|++|.+.+..
T Consensus       239 ~~aDvVi~aT~s~  251 (417)
T TIGR01035       239 AEADIVISSTGAP  251 (417)
T ss_pred             hhCCEEEECCCCC
Confidence            2589999987653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.41  E-value=0.088  Score=46.96  Aligned_cols=41  Identities=34%  Similarity=0.455  Sum_probs=36.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .|++++|.|+ +++|..++......|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999 9999999998889999999999888876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.38  E-value=0.01  Score=45.73  Aligned_cols=41  Identities=27%  Similarity=0.368  Sum_probs=37.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.+++++...
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~   64 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ   64 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC
Confidence            47999999999999999999999999999999999876543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.37  E-value=0.022  Score=50.02  Aligned_cols=78  Identities=19%  Similarity=0.285  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.++||+||++++|..++......|++|+.+++++++.+.+.+ +   +.+ .++  |..+.+ ..+.+.+...  +.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~-~vi--~~~~~~-~~~~v~~~~~--~gv  212 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFD-AVF--NYKTVS-LEEALKEAAP--DGI  212 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC-EEE--eCCCcc-HHHHHHHHCC--CCc
Confidence            58899999999999999988888899999998887776544432 3   222 122  333322 2222222221  469


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus       213 d~vld~~g  220 (329)
T cd08294         213 DCYFDNVG  220 (329)
T ss_pred             EEEEECCC
Confidence            99998766

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.32  E-value=0.024  Score=52.53  Aligned_cols=78  Identities=21%  Similarity=0.240  Sum_probs=51.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++.+|+++|+|++ ++|.++|+.|+++|+.|.+.+.+....  ..+++.+....+.+......+ .    .       .
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~~-~----~-------~   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLKD-A----L-------D   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCCH-H----H-------H
Confidence            34779999999986 899999999999999999998765431  122232211234444333221 1    1       1


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|.||...|+.
T Consensus        66 ~~~d~vv~spgi~   78 (445)
T PRK04308         66 NGFDILALSPGIS   78 (445)
T ss_pred             hCCCEEEECCCCC
Confidence            2589999999985

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.28  E-value=0.025  Score=48.53  Aligned_cols=77  Identities=19%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCC----CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           18 AIVTGGARGIGEATVRLFVKHG----AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +.|+||+|.+|..++..|+..|    ..++++|++++.++.....+............-.++  +.       .+.+...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~--d~-------~~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITD--DP-------YEAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECC--ch-------HHHhCCC
Confidence            4789998899999999999998    789999999888777766664321111000111111  11       1123469


Q ss_pred             cEEEECCCCC
Q 040531           94 DILFNNAGVL  103 (285)
Q Consensus        94 d~lv~~ag~~  103 (285)
                      |++|..+|..
T Consensus        72 DiVv~t~~~~   81 (263)
T cd00650          72 DVVIITAGVG   81 (263)
T ss_pred             CEEEECCCCC
Confidence            9999999874

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN00203 glutamyl-tRNA reductase

Probab=96.28  E-value=0.028  Score=52.82  Aligned_cols=77  Identities=17%  Similarity=0.315  Sum_probs=55.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++.+++++|.|+ |.+|+.+++.|...|. +|+++.|+.++.+.+.+.+.  +..+.+  .++   ++....+       
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~--~~~---~dl~~al-------  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY--KPL---DEMLACA-------  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe--ecH---hhHHHHH-------
Confidence            488999999999 9999999999999996 59999999988887776552  111221  122   2232222       


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+||.+.+..
T Consensus       328 ~~aDVVIsAT~s~  340 (519)
T PLN00203        328 AEADVVFTSTSSE  340 (519)
T ss_pred             hcCCEEEEccCCC
Confidence            3689999987653

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.27  E-value=0.016  Score=43.89  Aligned_cols=87  Identities=16%  Similarity=0.103  Sum_probs=53.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhhcC--------CCceEEEeccCCCHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSS--------SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~~~--------~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ...+-|.|+ |.+|.++++.|.+.|+.|..+. |+.+..+.+...+...        -.+...+.+-+.| +.|..++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            447888888 7889999999999999988774 5555555555444211        1233344455555 488888888


Q ss_pred             HHHH--cCCccEEEECCCCC
Q 040531           86 TISK--HGRLDILFNNAGVL  103 (285)
Q Consensus        86 i~~~--~~~id~lv~~ag~~  103 (285)
                      +...  +.+=.+|+|+.|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8765  33446899999975

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.27  E-value=0.0099  Score=46.85  Aligned_cols=46  Identities=26%  Similarity=0.380  Sum_probs=36.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++..+.+.+++..
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~   77 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT   77 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence            4799999999999999999999999999999999988776655444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.26  E-value=0.06  Score=49.12  Aligned_cols=44  Identities=25%  Similarity=0.561  Sum_probs=38.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      .+.|++++|.|++ .||+.++..+...|++|+++++++.++....
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            4789999999987 7999999999999999999999887765443

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.25  E-value=0.051  Score=46.11  Aligned_cols=38  Identities=24%  Similarity=0.434  Sum_probs=32.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~   48 (285)
                      +..|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            34578999999998 9999999999999996 47777653

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.24  E-value=0.029  Score=49.40  Aligned_cols=73  Identities=23%  Similarity=0.386  Sum_probs=53.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++.+++++|.|+ |.+|+.+++.|...| ..|++++|+.++..++.+++.   .  ..+     +.+++.+.+       
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~--~~~-----~~~~~~~~l-------  236 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---G--NAV-----PLDELLELL-------  236 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---C--eEE-----eHHHHHHHH-------
Confidence            378999999987 999999999999877 568899999888777776652   2  111     223333332       


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      ...|++|.+.+.
T Consensus       237 ~~aDvVi~at~~  248 (311)
T cd05213         237 NEADVVISATGA  248 (311)
T ss_pred             hcCCEEEECCCC
Confidence            257999998774

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.15  E-value=0.034  Score=45.77  Aligned_cols=39  Identities=21%  Similarity=0.332  Sum_probs=34.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      +.+++||.+||.|| |.+|...++.|.+.|++|+++++..
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            45789999999998 8899999999999999999998754

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.016  Score=50.08  Aligned_cols=39  Identities=31%  Similarity=0.469  Sum_probs=36.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++||.++|+|.+.-+|+.++..|.++|++|.++.++.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            378999999999999999999999999999999998754

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.12  E-value=0.06  Score=46.47  Aligned_cols=107  Identities=16%  Similarity=0.157  Sum_probs=70.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      -.|.|++|++|+|..|.-+..----+|++|+.+.-..++..-+.+++   +-.   ...|-... ++.+.+++..  -..
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD---~~idyk~~-d~~~~L~~a~--P~G  219 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFD---AGIDYKAE-DFAQALKEAC--PKG  219 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCc---eeeecCcc-cHHHHHHHHC--CCC
Confidence            36999999999999997665544466999999998888876666555   211   12344443 3333333222  136


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM  160 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~  160 (285)
                      ||+.+-|.|.-                              ++.+.++.|  +..+||++.+-++.+.
T Consensus       220 IDvyfeNVGg~------------------------------v~DAv~~~l--n~~aRi~~CG~IS~YN  255 (340)
T COG2130         220 IDVYFENVGGE------------------------------VLDAVLPLL--NLFARIPVCGAISQYN  255 (340)
T ss_pred             eEEEEEcCCch------------------------------HHHHHHHhh--ccccceeeeeehhhcC
Confidence            99999999841                              355667776  4568888877666544

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.12  E-value=0.02  Score=50.32  Aligned_cols=116  Identities=15%  Similarity=0.126  Sum_probs=69.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCe--EEEEecCc--hhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAK--VVIADIDD--AAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~--v~~~~r~~--~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +.+.|+|++|.+|..++..|+..|..  |++++++.  +.++...-.+.+    .+...   ....+..  .+       
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d--~~-------   68 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD--LS-------   68 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC--HH-------
Confidence            46899999999999999999999865  99999954  333332222211    11111   1111111  11       


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                       ....-|++|.++|....       .+.+.   .+.++.|+.-.....+.+.+..   ..+.+|++++..
T Consensus        69 -~l~~aDiViitag~p~~-------~~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~npv  124 (309)
T cd05294          69 -DVAGSDIVIITAGVPRK-------EGMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNPV  124 (309)
T ss_pred             -HhCCCCEEEEecCCCCC-------CCCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCch
Confidence             12479999999987421       12232   3445666666655666555432   357788888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN02494 adenosylhomocysteinase

Probab=96.11  E-value=0.072  Score=49.17  Aligned_cols=41  Identities=24%  Similarity=0.532  Sum_probs=36.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      ..+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            34789999999987 899999999999999999999887653

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.11  E-value=0.036  Score=48.68  Aligned_cols=79  Identities=19%  Similarity=0.244  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++.+++|.|+++++|.+++..+...|+.|+.++++.++.+.+.+.+   +.. .++  |..+.+..+. +.+..  .+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~~~~-v~~~~--~~~~  215 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AAI--NYKTPDLAEA-LKEAA--PDGI  215 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eEE--ecCChhHHHH-HHHhc--cCCc
Confidence            5789999999999999999999999999999988777655443323   211 112  2223222222 22222  1469


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.++|
T Consensus       216 d~vi~~~g  223 (329)
T cd05288         216 DVYFDNVG  223 (329)
T ss_pred             eEEEEcch
Confidence            99999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.11  E-value=0.056  Score=48.52  Aligned_cols=38  Identities=24%  Similarity=0.366  Sum_probs=32.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~   48 (285)
                      +..|++++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            44688999999988 79999999999999965 7777754

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.08  E-value=0.032  Score=48.58  Aligned_cols=79  Identities=22%  Similarity=0.366  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++++++|+|+++++|..++..+...|++|+++.++++..+.. ...   +.+.   ..+....+....+.+ ... .+.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~-~~~-~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADI---AINYREEDFVEVVKA-ETG-GKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCchhHHHHHHH-HcC-CCCe
Confidence            588999999999999999999999999999998887765433 322   2211   123333333222222 111 1359


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |++++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.03  E-value=0.12  Score=45.36  Aligned_cols=117  Identities=18%  Similarity=0.124  Sum_probs=69.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+.|+|++|.+|.++|..|+.++  ..++++|.+  .++...-.+...........+. .+ ++       +.+....-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~-------~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EE-------LKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cc-------hHHhcCCCC
Confidence            67899999999999999999888  469999987  3222222232211111111110 00 01       122335799


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ++|..||....     +  ..+   =.+.++.|..-.-.+.+.+.++   ...+.+|+++...
T Consensus        71 ivvitaG~~~k-----~--g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGVPRK-----P--GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             EEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            99999997421     1  223   3455777776666566655543   3467888887765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.02  E-value=0.057  Score=44.76  Aligned_cols=38  Identities=18%  Similarity=0.388  Sum_probs=32.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~   48 (285)
                      +..|++++++|.|+ ||+|..+++.|++.|.. +.++|.+
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            44578999999996 79999999999999976 8888876

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.01  E-value=0.093  Score=46.91  Aligned_cols=74  Identities=22%  Similarity=0.355  Sum_probs=47.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC---chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID---DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .|++++|+|+ |++|...+..+...|++|++++|+   +++.+ ..+++   +..  .  .|..+ +++.+    . ...
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---Ga~--~--v~~~~-~~~~~----~-~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---GAT--Y--VNSSK-TPVAE----V-KLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---CCE--E--ecCCc-cchhh----h-hhc
Confidence            6889999986 999999998877889999999884   44433 33333   322  1  23333 22221    1 123


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      +.+|++|.++|.
T Consensus       237 ~~~d~vid~~g~  248 (355)
T cd08230         237 GEFDLIIEATGV  248 (355)
T ss_pred             CCCCEEEECcCC
Confidence            479999998873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.00  E-value=0.14  Score=47.98  Aligned_cols=76  Identities=22%  Similarity=0.170  Sum_probs=51.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++.++|.|+ |++|.++|+.|+++|++|.++++++. ......+.+.+.+  +.++..+-..             ..
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g--v~~~~~~~~~-------------~~   76 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG--ATVRLGPGPT-------------LP   76 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC--CEEEECCCcc-------------cc
Confidence            578999999997 67999999999999999999986654 2233334444333  3333322211             01


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|.+|...|+.
T Consensus        77 ~~~D~Vv~s~Gi~   89 (480)
T PRK01438         77 EDTDLVVTSPGWR   89 (480)
T ss_pred             CCCCEEEECCCcC
Confidence            3589999998874

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.98  E-value=0.15  Score=45.75  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=48.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|++++|.|+ ++||..++......|++|++++.+.++.....+++   +... +  .|..+.+.+.+       ..+.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~-v--i~~~~~~~~~~-------~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADS-F--LVSTDPEKMKA-------AIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcE-E--EcCCCHHHHHh-------hcCCC
Confidence            6889999775 89999999888888999888877766544443333   2221 1  13333322222       22358


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |++|.+.|
T Consensus       249 D~vid~~g  256 (360)
T PLN02586        249 DYIIDTVS  256 (360)
T ss_pred             CEEEECCC
Confidence            99999877

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.96  E-value=0.13  Score=47.34  Aligned_cols=114  Identities=13%  Similarity=0.026  Sum_probs=73.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-------CC--eEEEEecCchhhHHHHHHhhcCC----CceEEEeccCCCHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH-------GA--KVVIADIDDAAGIALADSLLSSS----PLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~   82 (285)
                      -.+.|+|++|.+|.+++..|+..       +.  .+++++++.+.++...-++....    .++.+ ..  .+.      
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~y------  171 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPY------  171 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCH------
Confidence            36899999999999999999988       64  68999999998887776664321    12211 11  121      


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC--CCCceEEEEcccc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP--RRSGCIISTASVA  157 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~ii~vss~~  157 (285)
                           +.+..-|++|..||....     +  ..+.   .+.++.|+.=    ++...+.+.+  ...+.+|.+|...
T Consensus       172 -----e~~kdaDiVVitAG~prk-----p--G~tR---~dLl~~N~~I----~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        172 -----EVFQDAEWALLIGAKPRG-----P--GMER---ADLLDINGQI----FAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             -----HHhCcCCEEEECCCCCCC-----C--CCCH---HHHHHHHHHH----HHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                 223579999999997421     1  2233   3456666654    4444444444  3567788777543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.93  E-value=0.075  Score=44.56  Aligned_cols=83  Identities=19%  Similarity=0.346  Sum_probs=54.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC-------------------chhhHHHHHHhhcCCC--ceE
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID-------------------DAAGIALADSLLSSSP--LVT   67 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~-------------------~~~~~~~~~~~~~~~~--~v~   67 (285)
                      +..+++++|+|.| .||+|.++++.|+..|.. +.++|.+                   ..+.+.+.+.+.+..+  ++.
T Consensus        16 q~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~   94 (228)
T cd00757          16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIE   94 (228)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence            3467899999998 578999999999999964 7776432                   2334445555555444  455


Q ss_pred             EEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 040531           68 YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        68 ~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag  101 (285)
                      .+..+++ .+.+.+++       ...|++|.+..
T Consensus        95 ~~~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          95 AYNERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             EecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            5555553 23333332       35898888754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.83  E-value=0.18  Score=40.60  Aligned_cols=79  Identities=27%  Similarity=0.233  Sum_probs=60.4

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +.-+++||+|+=.|++.|+ .+++.  +-.| ..|+.++.+++.++.+.+...+..+++.++.+|+++..          
T Consensus        40 ~~g~l~g~~V~DlG~GTG~-La~ga--~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~----------  106 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGI-LAIGA--ALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR----------  106 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCH-HHHHH--HhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC----------
Confidence            3457899999999988774 23333  3356 56999999999999888888777788999999997632          


Q ss_pred             HHcCCccEEEECCCCC
Q 040531           88 SKHGRLDILFNNAGVL  103 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (285)
                         +++|.+|-|.-+.
T Consensus       107 ---~~~dtvimNPPFG  119 (198)
T COG2263         107 ---GKFDTVIMNPPFG  119 (198)
T ss_pred             ---CccceEEECCCCc
Confidence               4788999997543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.82  E-value=0.31  Score=39.95  Aligned_cols=71  Identities=23%  Similarity=0.192  Sum_probs=49.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-hHHHHHHhhcC-----------CCceEEEeccCCCHHHHHHHHHH
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-GIALADSLLSS-----------SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-~~~~~~~~~~~-----------~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ....+|+|.||.+++++|++.|+.|++..|+.++ +....+.+...           ...+.++...+   +.+..+.++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence            4567889999999999999999999998665554 44444433211           23566666666   566677777


Q ss_pred             HHHHcC
Q 040531           86 TISKHG   91 (285)
Q Consensus        86 i~~~~~   91 (285)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            777664

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.82  E-value=0.045  Score=50.08  Aligned_cols=41  Identities=22%  Similarity=0.532  Sum_probs=36.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .+.|++++|+|. |.||+.++..+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            478999999997 68999999999999999999998876643

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.82  E-value=0.16  Score=45.76  Aligned_cols=78  Identities=22%  Similarity=0.303  Sum_probs=49.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+++++|+|+ ++||..++..+...|+ .|+.+++++++.+.+ .++   +.. .  ..|..+.+..+. +.++.  .+.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~-~--~i~~~~~~~~~~-i~~~~--~~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GAT-A--TVNAGDPNAVEQ-VRELT--GGG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCc-e--EeCCCchhHHHH-HHHHh--CCC
Confidence            5889999985 8999998888888899 588888888776544 333   222 1  123333222222 22221  236


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus       260 ~d~vid~~G~  269 (371)
T cd08281         260 VDYAFEMAGS  269 (371)
T ss_pred             CCEEEECCCC
Confidence            9999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.80  E-value=0.1  Score=47.36  Aligned_cols=74  Identities=19%  Similarity=0.328  Sum_probs=56.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++++||.||+ -+|.-+|++|+++| ..|+++.|+.++.+++++++.          +++...+++...+       
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l-------  236 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL-------  236 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh-------
Confidence            5899999999984 57999999999999 568999999999999988773          2222333433333       


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+||.+.|..
T Consensus       237 ~~~DvVissTsa~  249 (414)
T COG0373         237 AEADVVISSTSAP  249 (414)
T ss_pred             hhCCEEEEecCCC
Confidence            4689999988754

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.80  E-value=0.045  Score=47.69  Aligned_cols=79  Identities=18%  Similarity=0.263  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++++++|+|+++++|++++..+...|+.++.++++.+..+.+ ...   +.. .++  |....+....+ .+... ...+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~~~~~~~-~~~~~-~~~~  214 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA-HVI--VTDEEDLVAEV-LRITG-GKGV  214 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC-EEE--ecCCccHHHHH-HHHhC-CCCc
Confidence            578999999999999999999999999999998887665544 222   211 122  22222222222 22211 2259


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |++++++|
T Consensus       215 d~vi~~~~  222 (328)
T cd08268         215 DVVFDPVG  222 (328)
T ss_pred             eEEEECCc
Confidence            99999876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.79  E-value=0.055  Score=47.84  Aligned_cols=118  Identities=19%  Similarity=0.176  Sum_probs=69.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+.+.+.|+|| |.+|..++..++..| ..++++|++++.++...-.+....   .....+.+ .+|.++          
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~~----------   70 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYED----------   70 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHHH----------
Confidence            46678999997 889999999999999 789999998876543222221110   00011111 122221          


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVA  157 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~  157 (285)
                       +..-|++|.++|....       ...+.   .+.+..|.    -+.+.+.+.+.+. ..+.+|+++...
T Consensus        71 -l~~ADiVVitag~~~~-------~g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         71 -IKDSDVVVITAGVQRK-------EEMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             -hCCCCEEEECCCCCCC-------CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence             2368999999986422       11232   34555666    3455555555433 356677776644

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.79  E-value=0.027  Score=45.48  Aligned_cols=43  Identities=21%  Similarity=0.248  Sum_probs=35.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL   60 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~   60 (285)
                      +|.|.|+ |-+|+.+|..|+..|++|++++++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4678888 899999999999999999999999998877766653

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.78  E-value=0.022  Score=49.53  Aligned_cols=41  Identities=22%  Similarity=0.365  Sum_probs=37.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||+++|.|.++-+|+.++..|.++|++|.++.++...
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~  195 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD  195 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC
Confidence            37899999999999999999999999999999999876553

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.77  E-value=0.089  Score=43.18  Aligned_cols=39  Identities=23%  Similarity=0.430  Sum_probs=34.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID   48 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~   48 (285)
                      .+..|+.++++|.|+ ||+|..++..|++.|. +++++|.+
T Consensus        15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        15 IVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            445688999999998 6899999999999998 59998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.032  Score=48.15  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=36.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||.++|.|.|.-+|+.++..|.++|++|.++..+...
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~  193 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD  193 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH
Confidence            37899999999999999999999999999999988654433

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.74  E-value=0.59  Score=39.58  Aligned_cols=145  Identities=14%  Similarity=0.225  Sum_probs=88.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|.++||--|+||+|..++..+-..|+.++.+....++.+.+.+.     +--+  ..|.+.++-++++.+ +. +...+
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken-----G~~h--~I~y~~eD~v~~V~k-iT-ngKGV  216 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN-----GAEH--PIDYSTEDYVDEVKK-IT-NGKGV  216 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc-----CCcc--eeeccchhHHHHHHh-cc-CCCCc
Confidence            689999999999999999999999999999988777776555442     2222  245555444433322 21 22368


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------  162 (285)
                      |++.-..|.-               +|...               +..+  +..|++|..+-..+..+.           
T Consensus       217 d~vyDsvG~d---------------t~~~s---------------l~~L--k~~G~mVSfG~asgl~~p~~l~~ls~k~l  264 (336)
T KOG1197|consen  217 DAVYDSVGKD---------------TFAKS---------------LAAL--KPMGKMVSFGNASGLIDPIPLNQLSPKAL  264 (336)
T ss_pred             eeeeccccch---------------hhHHH---------------HHHh--ccCceEEEeccccCCCCCeehhhcChhhh
Confidence            9888876641               12211               1222  346888888776665432           


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHhC--CCCcEEEEEeCC
Q 040531          163 ----LGPHAYTVSKHAIVGLTKNTACELG--KYGIRVNCISPF  199 (285)
Q Consensus       163 ----~~~~~Y~asKaa~~~l~~~la~e~~--~~~i~v~~v~pg  199 (285)
                          |....|-....-+..++..+-.++.  ..+|+++.+.|-
T Consensus       265 ~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  265 QLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             hhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence                1223455555555555544444443  246788888773

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.70  E-value=0.055  Score=50.12  Aligned_cols=76  Identities=22%  Similarity=0.231  Sum_probs=59.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ...++++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+.    ...+.++.+|.++.+.+.++-      ...
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            45788999999 8999999999999999999999998876655443    234678899999987765541      135


Q ss_pred             ccEEEEC
Q 040531           93 LDILFNN   99 (285)
Q Consensus        93 id~lv~~   99 (285)
                      .|.+|..
T Consensus       298 a~~vi~~  304 (453)
T PRK09496        298 ADAFIAL  304 (453)
T ss_pred             CCEEEEC
Confidence            7777764

>PRK05442 malate dehydrogenase; Provisional

Probab=95.69  E-value=0.074  Score=47.12  Aligned_cols=113  Identities=13%  Similarity=0.033  Sum_probs=66.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCch--hhHHHHHHhhcCC----CceEEEeccCCCHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDA--AGIALADSLLSSS----PLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~   82 (285)
                      +.+.|+|++|.+|..++..|+..+.       .++++|.++.  .++...-.+....    ..+.+ ..           
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~-----------   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD-----------   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec-----------
Confidence            4789999999999999999998763       6999998543  2332222221110    11111 11           


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-C-CCceEEEEccc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-R-RSGCIISTASV  156 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~g~ii~vss~  156 (285)
                        ...+....-|++|..||...     ++  ..+   -.+.++.|+.    +++.+.+.+.+ . ..+.++.+|..
T Consensus        73 --~~y~~~~daDiVVitaG~~~-----k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNP  132 (326)
T PRK05442         73 --DPNVAFKDADVALLVGARPR-----GP--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGNP  132 (326)
T ss_pred             --ChHHHhCCCCEEEEeCCCCC-----CC--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCCc
Confidence              11233457899999999742     11  223   3445666654    44555555544 2 36777777753

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.68  E-value=0.26  Score=44.07  Aligned_cols=41  Identities=24%  Similarity=0.242  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIAL   55 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~   55 (285)
                      .++++||+| ++++|..++..+...|+ +|+++++++++...+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            688999997 59999999988888999 898888877765433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.68  E-value=0.019  Score=48.08  Aligned_cols=37  Identities=32%  Similarity=0.534  Sum_probs=33.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe---EEEEecC
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK---VVIADID   48 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~---v~~~~r~   48 (285)
                      .++++++++|.|| |+.|++++..|++.|.+   +.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4689999999999 88899999999999975   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14967 putative methyltransferase; Provisional

Probab=95.67  E-value=0.29  Score=40.75  Aligned_cols=76  Identities=17%  Similarity=0.123  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++..+|-.|+++|.   ++..+++.+. +|+.++.++..+....+.+...+.++.++..|+.+.      .     ..+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~-----~~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V-----EFRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c-----cCCC
Confidence            46789999987654   3444555665 899999999887766666544444677777776431      1     1247


Q ss_pred             ccEEEECCCCC
Q 040531           93 LDILFNNAGVL  103 (285)
Q Consensus        93 id~lv~~ag~~  103 (285)
                      .|.++.|..+.
T Consensus       102 fD~Vi~npPy~  112 (223)
T PRK14967        102 FDVVVSNPPYV  112 (223)
T ss_pred             eeEEEECCCCC
Confidence            99999998764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.64  E-value=0.14  Score=45.50  Aligned_cols=89  Identities=17%  Similarity=0.236  Sum_probs=55.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH---Hhhc--CCCceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD---SLLS--SSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~---~~~~--~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ..++|+++.|.|. |.||+++|+.|...|++|++.+|+.........   .+.+  ...++.++.+..+.. ...-+-++
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999986 669999999999999999999988654322111   1111  134566677766542 22222233


Q ss_pred             HHHHcCCccEEEECCCC
Q 040531           86 TISKHGRLDILFNNAGV  102 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~  102 (285)
                      ..+.. +.+.++-|++.
T Consensus       220 ~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        220 MFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHhcC-CCCcEEEEcCC
Confidence            33332 45556666664

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.63  E-value=0.23  Score=46.77  Aligned_cols=127  Identities=17%  Similarity=0.191  Sum_probs=70.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      -++++++.++|.|.+ +.|+++|+.|.++|+.|.+.|.+...  ...+.+.+.+..+.+...+.. ++.+          
T Consensus         2 ~~~~~~~~i~v~G~G-~sG~s~a~~L~~~G~~v~~~D~~~~~--~~~~~L~~~~~~~~~~~g~~~-~~~~----------   67 (498)
T PRK02006          2 FGDLQGPMVLVLGLG-ESGLAMARWCARHGARLRVADTREAP--PNLAALRAELPDAEFVGGPFD-PALL----------   67 (498)
T ss_pred             ccccCCCEEEEEeec-HhHHHHHHHHHHCCCEEEEEcCCCCc--hhHHHHHhhcCCcEEEeCCCc-hhHh----------
Confidence            345788999999954 67899999999999999999976532  112223222223333322221 1111          


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHH--HHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEccccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDN--IIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVAS  158 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~--~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~  158 (285)
                       ...|.||...|+....       +.....+..  ...+.+.+-..++..++..+..+. ..++|.|+...+
T Consensus        68 -~~~d~vv~sp~I~~~~-------~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnG  131 (498)
T PRK02006         68 -DGVDLVALSPGLSPLE-------AALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNG  131 (498)
T ss_pred             -cCCCEEEECCCCCCcc-------cccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCc
Confidence             2479999998874210       001122222  235666766666555554332111 225666666554

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.63  E-value=0.14  Score=45.09  Aligned_cols=89  Identities=18%  Similarity=0.136  Sum_probs=54.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH------Hhhc--CCCceEEEeccCCCHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD------SLLS--SSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~------~~~~--~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ..|+||++.|.|- |.||+++|+.|...|.+|++.+|..........      .+.+  ...++..+.+-  +.+. ..+
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~V   87 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AHV   87 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HHH
Confidence            4589999999987 779999999999999999988765433222111      1111  12344444443  3333 344


Q ss_pred             H-HHHHHHcCCccEEEECCCCC
Q 040531           83 I-NVTISKHGRLDILFNNAGVL  103 (285)
Q Consensus        83 ~-~~i~~~~~~id~lv~~ag~~  103 (285)
                      + +++.....+=.+|+..-|+.
T Consensus        88 ~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         88 YKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHHHHHhcCCCCCEEEECCCcc
Confidence            4 34555444445677766664

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.61  E-value=0.23  Score=43.98  Aligned_cols=113  Identities=17%  Similarity=0.081  Sum_probs=67.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCc--hhhHHHHHHhhcCC-C---ceEEEeccCCCHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDD--AAGIALADSLLSSS-P---LVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~-~---~v~~~~~D~s~~~~i~~~~   83 (285)
                      .+.|+||+|.+|.+++..|+..+.       .++++|.++  +.++...-.+.... .   .+. +..  .+        
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~--------   73 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DP--------   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--Ch--------
Confidence            688999999999999999998884       799999865  32444443332211 1   111 110  11        


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                         .+....-|++|..||...     ++  ..+   -.+.++.|+.-.-.+.+.+.++-  .+.+.++.+|.
T Consensus        74 ---~~~~~daDvVVitAG~~~-----k~--g~t---R~dll~~Na~i~~~i~~~i~~~~--~~~~iiivvsN  130 (323)
T TIGR01759        74 ---EEAFKDVDAALLVGAFPR-----KP--GME---RADLLSKNGKIFKEQGKALNKVA--KKDVKVLVVGN  130 (323)
T ss_pred             ---HHHhCCCCEEEEeCCCCC-----CC--CCc---HHHHHHHHHHHHHHHHHHHHhhC--CCCeEEEEeCC
Confidence               122346899999999742     11  223   34456777655555555444432  12567777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.59  E-value=0.11  Score=45.61  Aligned_cols=116  Identities=17%  Similarity=0.170  Sum_probs=66.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           18 AIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.|+|++|.+|.++|..|+..+.  .++++|+++.  ....-.+........+..+.- + ++       ..+.+..-|+
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~DL~~~~~~~~i~~~~~-~-~~-------~~~~~~daDi   70 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAADLSHIPTAASVKGFSG-E-EG-------LENALKGADV   70 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEchhhcCCcCceEEEecC-C-Cc-------hHHHcCCCCE
Confidence            68999999999999999998874  5999998772  211111211111111111000 0 00       1223457999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEccccc
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVAS  158 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~  158 (285)
                      +|..||....     +  ..+   -.+.++.|+.    +++...+.+.+. ..+.+|++|....
T Consensus        71 vvitaG~~~~-----~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        71 VVIPAGVPRK-----P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             EEEeCCCCCC-----C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence            9999997421     1  123   3345777776    444444444333 4677777777654

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.59  E-value=0.039  Score=44.36  Aligned_cols=45  Identities=24%  Similarity=0.228  Sum_probs=37.9

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      ....++.|+++.|.|. |.||+++|+.+...|++|+.++|+.....
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3455789999999976 89999999999999999999999888654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.58  E-value=0.35  Score=42.49  Aligned_cols=112  Identities=15%  Similarity=0.119  Sum_probs=67.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+.|.|+ |.+|..++..|+.+|  ..+++++++.+..+.....+....   .......   .+.+           ...
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-----------HhC
Confidence            4788998 899999999999999  579999999877664443343211   1122111   1211           134


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ..|++|.++|....     +  ..+   ..+.+..|+.-.-.+.+.+..+   ...|.++.++..
T Consensus        67 ~aDiViita~~~~~-----~--~~~---r~dl~~~n~~i~~~~~~~l~~~---~~~giiiv~tNP  118 (308)
T cd05292          67 GADVVVITAGANQK-----P--GET---RLDLLKRNVAIFKEIIPQILKY---APDAILLVVTNP  118 (308)
T ss_pred             CCCEEEEccCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCc
Confidence            78999999986421     1  112   3445666665554455554442   245777777653

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.58  E-value=0.06  Score=37.64  Aligned_cols=36  Identities=36%  Similarity=0.668  Sum_probs=31.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEec
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADI   47 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r   47 (285)
                      .++++++++|.|+ ++.|+.++..|.+. +.++.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4588999999999 99999999999998 567877776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.57  E-value=0.075  Score=42.03  Aligned_cols=84  Identities=17%  Similarity=0.115  Sum_probs=57.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--C-----CceEEEeccCCCHHHHHHHHHH--H
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--S-----PLVTYLHCDVSLEQDIQNLINV--T   86 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~-----~~v~~~~~D~s~~~~i~~~~~~--i   86 (285)
                      +++.+.|- |-.|+.+++.|++.|+.|.+.+|+++..+++.+.-...  .     .+..++..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            35667776 78999999999999999999999998888776542110  0     1234555667888888888887  6


Q ss_pred             HHHcCCccEEEECC
Q 040531           87 ISKHGRLDILFNNA  100 (285)
Q Consensus        87 ~~~~~~id~lv~~a  100 (285)
                      .....+=+++|...
T Consensus        81 ~~~l~~g~iiid~s   94 (163)
T PF03446_consen   81 LAGLRPGKIIIDMS   94 (163)
T ss_dssp             GGGS-TTEEEEE-S
T ss_pred             hhccccceEEEecC
Confidence            66554555666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.55  E-value=0.14  Score=39.11  Aligned_cols=79  Identities=19%  Similarity=0.346  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC-------------------chhhHHHHHHhhcC--CCceEEEec
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID-------------------DAAGIALADSLLSS--SPLVTYLHC   71 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~-------------------~~~~~~~~~~~~~~--~~~v~~~~~   71 (285)
                      |+++++|.|+ |++|.++++.|+..|.. +.++|.+                   ..+.+.+.+.+.+.  ..++..+..
T Consensus         1 r~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~   79 (135)
T PF00899_consen    1 RNKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE   79 (135)
T ss_dssp             HT-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence            3567888876 67999999999999974 8887642                   22334444555443  345777777


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 040531           72 DVSLEQDIQNLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        72 D~s~~~~i~~~~~~i~~~~~~id~lv~~ag  101 (285)
                      ++ +.+...++++       ..|++|.+..
T Consensus        80 ~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   80 KI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             cc-cccccccccc-------CCCEEEEecC
Confidence            87 3445555542       6798988643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.55  E-value=0.083  Score=46.99  Aligned_cols=40  Identities=20%  Similarity=0.195  Sum_probs=36.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      ..++||++.|.|. |.||+.+|+.|...|++|+..+|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            5789999999998 899999999999999999999987543

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.53  E-value=0.032  Score=48.13  Aligned_cols=42  Identities=26%  Similarity=0.362  Sum_probs=36.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++.++...+
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l  195 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDL  195 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCH
Confidence            378999999999999999999999999999999887654443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.52  E-value=0.2  Score=43.73  Aligned_cols=64  Identities=17%  Similarity=0.198  Sum_probs=46.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC-CHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS-LEQDIQNLIN   84 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s-~~~~i~~~~~   84 (285)
                      .|+++.|+|++| ||.--++.--..|++|+++++....-+++.+.+   +.+..   .|.+ |++.++++.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~f---v~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVF---VDSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Cccee---EEecCCHHHHHHHHH
Confidence            799999999998 997555555567999999999886667777766   44433   4566 5555555544

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.52  E-value=0.21  Score=43.12  Aligned_cols=41  Identities=27%  Similarity=0.301  Sum_probs=33.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIA   54 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~   54 (285)
                      ..+++++|.|+ ++||..++..+...|+. |+++++++++.+.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            36889999986 89999998888888987 7788777776543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.51  E-value=0.04  Score=45.85  Aligned_cols=42  Identities=24%  Similarity=0.272  Sum_probs=37.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS   58 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~   58 (285)
                      ++.|+||+|.+|.+++..|++.|++|.+.+|+++..+.....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999999999999999999999999999998887766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.48  E-value=0.12  Score=41.43  Aligned_cols=31  Identities=23%  Similarity=0.469  Sum_probs=26.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCe-EEEEecCc
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAK-VVIADIDD   49 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~   49 (285)
                      ++|.|+ ||+|.++++.|++.|.. +.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677875 89999999999999975 99998765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.47  E-value=0.27  Score=44.01  Aligned_cols=78  Identities=19%  Similarity=0.262  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|+++||.|+ +++|..++......|+. |+.+++++++.+.+ +++   +.. .+  .|..+.+..+.+ .+... ...
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~-~~--i~~~~~~~~~~i-~~~~~-~~g  245 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GAT-HT--VNSSGTDPVEAI-RALTG-GFG  245 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc-eE--EcCCCcCHHHHH-HHHhC-CCC
Confidence            5889999985 99999998888888986 88888887775544 333   222 11  233332222222 21211 125


Q ss_pred             ccEEEECCC
Q 040531           93 LDILFNNAG  101 (285)
Q Consensus        93 id~lv~~ag  101 (285)
                      +|+++.++|
T Consensus       246 ~d~vid~~g  254 (358)
T TIGR03451       246 ADVVIDAVG  254 (358)
T ss_pred             CCEEEECCC
Confidence            899999877

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.43  E-value=0.3  Score=44.18  Aligned_cols=116  Identities=13%  Similarity=0.007  Sum_probs=69.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-e------EEEE--ecCchhhHHHHHHhhcCC----CceEEEeccCCCHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-K------VVIA--DIDDAAGIALADSLLSSS----PLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-~------v~~~--~r~~~~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~   82 (285)
                      -.+.|+||+|.+|.++|..++..+. .      ++++  +++.+.++...-++....    .++.+. .  .+       
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~-------  114 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DP-------  114 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CC-------
Confidence            3799999999999999999998873 2      3344  888888777666664321    111111 1  11       


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                          .+.+..-|++|..||...     ++  ..+.   .+.++.|+.=.-.+.+.+.++-  +..+.+|++|-..
T Consensus       115 ----y~~~kdaDIVVitAG~pr-----kp--g~tR---~dll~~N~~I~k~i~~~I~~~a--~~~~iviVVsNPv  173 (387)
T TIGR01757       115 ----YEVFEDADWALLIGAKPR-----GP--GMER---ADLLDINGQIFADQGKALNAVA--SKNCKVLVVGNPC  173 (387)
T ss_pred             ----HHHhCCCCEEEECCCCCC-----CC--CCCH---HHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEcCCcH
Confidence                122357999999999742     11  2232   3456666654444444443321  2467777777543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.43  E-value=0.085  Score=48.78  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=36.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      ...+.||+++|.|.+ .||+.+|+.+...|++|+++++++...
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            347899999999987 599999999999999999998876654

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.40  E-value=0.042  Score=47.44  Aligned_cols=41  Identities=17%  Similarity=0.166  Sum_probs=37.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||.++|.|-|.-+|+.++..|.++|++|.++.++...
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~  195 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN  195 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC
Confidence            47899999999999999999999999999999999876543

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.40  E-value=0.015  Score=42.23  Aligned_cols=39  Identities=31%  Similarity=0.542  Sum_probs=33.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      +.+++||.+||+|+ |.+|..-++.|++.|++|.+++...
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            45899999999999 8899999999999999999999876

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.39  E-value=0.049  Score=47.03  Aligned_cols=42  Identities=19%  Similarity=0.288  Sum_probs=36.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+++||+++|.|.|.-+|+.++..|.+++++|.++..+...+
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l  195 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNL  195 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            378999999999999999999999999999999987554433

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.36  E-value=0.098  Score=42.84  Aligned_cols=38  Identities=24%  Similarity=0.322  Sum_probs=31.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~   48 (285)
                      +..+++++|+|.|++ |+|.++++.|+..|.. +.++|.+
T Consensus        16 Q~~L~~s~VlIiG~g-glG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          16 QKRLRSARILLIGLK-GLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHHhCcEEEEcCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            445789999999854 5999999999999976 7777653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.35  E-value=0.06  Score=46.84  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=51.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +++||+++|.|-++-+|+.+|..|+++|++|.++..+...+++....     .++  +.+=+.+.+.+...+       -
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~-----ADI--VIsavg~~~~v~~~~-------l  220 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRR-----ADI--LVAAVGRPEMVKGDW-------I  220 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhc-----CCE--EEEecCChhhcchhe-------e
Confidence            78999999999999999999999999999999995333333333321     222  333344444444322       2


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      +...+|-..|+.
T Consensus       221 k~GavVIDvGin  232 (296)
T PRK14188        221 KPGATVIDVGIN  232 (296)
T ss_pred             cCCCEEEEcCCc
Confidence            345566667764

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.32  E-value=0.11  Score=45.54  Aligned_cols=78  Identities=22%  Similarity=0.333  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++.+++|.|+++++|.+++......|++|+.+.++++....+ ..+   +.. .++  |..+ .+..+.+.....  +.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~v~--~~~~-~~~~~~~~~~~~--~~v  208 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCD-RPI--NYKT-EDLGEVLKKEYP--KGV  208 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCc-eEE--eCCC-ccHHHHHHHhcC--CCC
Confidence            688999999999999999988889999999988877665444 333   221 122  2222 222222322221  369


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |.++++.|
T Consensus       209 d~v~~~~g  216 (329)
T cd08250         209 DVVYESVG  216 (329)
T ss_pred             eEEEECCc
Confidence            99999766

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.31  E-value=0.39  Score=42.30  Aligned_cols=116  Identities=14%  Similarity=0.048  Sum_probs=70.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+.|+|+ |.+|.+++..++..|.  .++++|.+++.++.....+....   ....+...  .|.++           .
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------h
Confidence            47899996 9999999999998873  59999998877666665554321   11122211  12121           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      ...|++|..||....     +  ..+..   +.++.|+.=.-.+.+.+.+.   ...+.+++++....
T Consensus        70 ~~adivvitaG~~~k-----~--g~~R~---dll~~N~~i~~~~~~~i~~~---~p~~~vivvsNP~d  124 (312)
T cd05293          70 ANSKVVIVTAGARQN-----E--GESRL---DLVQRNVDIFKGIIPKLVKY---SPNAILLVVSNPVD  124 (312)
T ss_pred             CCCCEEEECCCCCCC-----C--CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEccChHH
Confidence            468999999997421     1  23433   34555654444444444332   24677888876443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.31  E-value=0.11  Score=46.83  Aligned_cols=79  Identities=24%  Similarity=0.257  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|.++||+|+ ++||...+......|+ +|+.++++.++.+.+ .++   +... +  .|..+ .+++.+.+.++..  +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~-~--i~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD-C--VNPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe-E--EcccccchhHHHHHHHHhC--C
Confidence            5889999985 8999999888888898 698898888876554 333   2221 1  23332 2233333333322  3


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.29  E-value=0.046  Score=47.15  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=37.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHh
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSL   59 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~   59 (285)
                      +++++|.|+ ||-+++++..|++.|+. |.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568999986 88899999999999975 999999998887776654

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.29  E-value=0.045  Score=47.13  Aligned_cols=41  Identities=24%  Similarity=0.313  Sum_probs=36.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++......
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~  193 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD  193 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC
Confidence            47899999999999999999999999999999987655443

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.28  E-value=0.22  Score=43.91  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=34.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++||++.|.|- |.||+++|+.+...|.+|+..++..
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~  180 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKG  180 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCc
Confidence            5799999999997 8899999999999999999887653

>PLN02740 Alcohol dehydrogenase-like

Probab=95.27  E-value=0.13  Score=46.60  Aligned_cols=79  Identities=19%  Similarity=0.203  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH-HHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE-QDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~i~~~~~   91 (285)
                      +|.++||.|+ ++||..++..+...|+ .|+.+++++++++.+. ++   +... ++  |..+. ++..+.+.++..  +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~-~i--~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GITD-FI--NPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCcE-EE--ecccccchHHHHHHHHhC--C
Confidence            5889999986 8999999998888998 5999998888765553 33   2221 22  33332 223333333322  2


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|+++.++|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999998884

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.25  E-value=0.046  Score=47.23  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=37.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+++||+++|.|.|.-+|+.++..|.+++++|.++.++...+
T Consensus       151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l  192 (287)
T PRK14173        151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDL  192 (287)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            378999999999999999999999999999999887655443

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.25  E-value=0.16  Score=44.15  Aligned_cols=76  Identities=21%  Similarity=0.314  Sum_probs=50.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.+++|.|+++++|.+++......|++|+.+.++.++.+.+ .++   +.+.. +. +  .. +..+.+.+.   ...+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~-~~-~--~~-~~~~~i~~~---~~~~  209 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GADEV-VI-D--DG-AIAEQLRAA---PGGF  209 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCcEE-Ee-c--Cc-cHHHHHHHh---CCCc
Confidence            588999999999999999999999999999888877664433 322   22211 11 1  11 112212222   2469


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |.++++.|
T Consensus       210 d~vl~~~~  217 (320)
T cd08243         210 DKVLELVG  217 (320)
T ss_pred             eEEEECCC
Confidence            99999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.24  E-value=0.11  Score=45.51  Aligned_cols=42  Identities=31%  Similarity=0.388  Sum_probs=36.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .+++++|.|+++++|..++......|++|+.+++++++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999889999999999888775544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.23  E-value=0.46  Score=39.42  Aligned_cols=77  Identities=12%  Similarity=0.145  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-------------CCCceEEEeccCCCHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-------------SSPLVTYLHCDVSLEQDIQ   80 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-------------~~~~v~~~~~D~s~~~~i~   80 (285)
                      .+.+||+.|++.|   .=+..||++|++|+.++.++...+.+.++...             ...++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999999877   46778899999999999999988865442210             13468889999977432  


Q ss_pred             HHHHHHHHHcCCccEEEECCCC
Q 040531           81 NLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        81 ~~~~~i~~~~~~id~lv~~ag~  102 (285)
                             +..+..|.++-.+..
T Consensus       109 -------~~~~~fD~i~D~~~~  123 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAAL  123 (213)
T ss_pred             -------ccCCCcCEEEechhh
Confidence                   112457877776543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.23  E-value=0.047  Score=47.08  Aligned_cols=43  Identities=21%  Similarity=0.254  Sum_probs=38.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .+++||+++|.|-|.-+|+.++..|.+++++|.++..+...+.
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~  197 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP  197 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            3789999999999999999999999999999999986655443

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.19  E-value=0.05  Score=46.89  Aligned_cols=43  Identities=21%  Similarity=0.245  Sum_probs=37.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .+++||.++|.|.|.-+|+.++..|.+++++|.++.++...+.
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~  196 (282)
T PRK14180        154 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK  196 (282)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence            3689999999999999999999999999999999887655443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.19  E-value=0.1  Score=46.26  Aligned_cols=78  Identities=17%  Similarity=0.176  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|.+++|+|+ +++|..++..+...|++ |+++++++++.+.+ .++   +..   ...|..+.+ .+++.+ +.. ...
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~---~~i~~~~~~-~~~~~~-~~~-~~~  231 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GAD---FVINSGQDD-VQEIRE-LTS-GAG  231 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC---EEEcCCcch-HHHHHH-HhC-CCC
Confidence            5899999986 89999999988899999 99888887775543 333   222   122443333 333222 211 126


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|+++.+.|.
T Consensus       232 ~d~vid~~g~  241 (339)
T cd08239         232 ADVAIECSGN  241 (339)
T ss_pred             CCEEEECCCC
Confidence            9999998773

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.18  E-value=0.05  Score=46.79  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=37.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+++||.++|.|-|.-+|+.++..|.++|++|.++.++...+
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l  195 (278)
T PRK14172        154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL  195 (278)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            378999999999999999999999999999999988655443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.18  E-value=0.26  Score=45.53  Aligned_cols=41  Identities=24%  Similarity=0.462  Sum_probs=35.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD   57 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~   57 (285)
                      ++.|+||.|.+|.++++.|.+.|+.|.+++|+.+...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            68999999999999999999999999999998776544433

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.17  E-value=0.16  Score=44.44  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.+ +++   +.. .+  .|..+.+..+.+.+ .. ....+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~~-~~-~~~~~  212 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GAD-VA--VDYTRPDWPDQVRE-AL-GGGGV  212 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC-EE--EecCCccHHHHHHH-Hc-CCCCc
Confidence            478999999999999999999999999999999887775544 333   222 11  23333333333221 11 11259


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++++.|
T Consensus       213 d~vl~~~g  220 (324)
T cd08244         213 TVVLDGVG  220 (324)
T ss_pred             eEEEECCC
Confidence            99999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.17  E-value=0.48  Score=42.09  Aligned_cols=41  Identities=37%  Similarity=0.413  Sum_probs=33.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIAL   55 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~   55 (285)
                      .+++++|+| .+++|..++......|+. |+.+++++++.+.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  201 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA  201 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            588999997 599999999888889997 67788877776543

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.14  E-value=0.052  Score=46.85  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=36.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||+++|+|.|.-+|+.++..|.++|++|.++..+...
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~  200 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD  200 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC
Confidence            47899999999999999999999999999999998865443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.14  E-value=0.14  Score=44.71  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.+++|.|+++++|.+++......|+.++.+.++.+..+.+.+ +   +.+ .++  +..+. +..+.+.+... ...+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~-~~~--~~~~~-~~~~~i~~~~~-~~~~  209 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG-PVV--STEQP-GWQDKVREAAG-GAPI  209 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC-EEE--cCCCc-hHHHHHHHHhC-CCCC
Confidence            58899999999999999999998999999998887776544432 2   222 122  22222 22222222211 1259


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |+++.+.|.
T Consensus       210 d~v~d~~g~  218 (324)
T cd08292         210 SVALDSVGG  218 (324)
T ss_pred             cEEEECCCC
Confidence            999998773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.11  E-value=0.19  Score=38.72  Aligned_cols=31  Identities=23%  Similarity=0.474  Sum_probs=26.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA-KVVIADID   48 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~   48 (285)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 8999999999999997 48887754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.11  E-value=0.051  Score=42.15  Aligned_cols=41  Identities=17%  Similarity=0.257  Sum_probs=33.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL   60 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~   60 (285)
                      |+.+|+.+.+|++||..|.++|.+|+.+  +.++.+.+..++.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            5789999999999999999999999998  5555566655553

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.09  E-value=0.17  Score=41.73  Aligned_cols=59  Identities=25%  Similarity=0.384  Sum_probs=42.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVS   74 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s   74 (285)
                      +.+++||.+||.||+ .+|..-++.|++.|+.|.+++.+.. .+..+.    + .+++.++.-++.
T Consensus         4 ~l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~----~-~~~i~~~~~~~~   63 (205)
T TIGR01470         4 FANLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELESELTLLA----E-QGGITWLARCFD   63 (205)
T ss_pred             EEEcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH----H-cCCEEEEeCCCC
Confidence            457999999999975 5689999999999999999987654 222222    2 236777666664

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN03139 formate dehydrogenase; Provisional

Probab=95.08  E-value=0.16  Score=46.09  Aligned_cols=39  Identities=21%  Similarity=0.215  Sum_probs=34.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      ..++.||++.|.|. |.||+.+++.|...|++|+..+|+.
T Consensus       194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            35799999999994 7799999999999999999998764

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=95.02  E-value=1.2  Score=35.83  Aligned_cols=79  Identities=15%  Similarity=0.124  Sum_probs=61.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+.++=.|.+||+-.+........++....+|-|+..++...+-.+-...++..+++|+-+         .+..  +++|
T Consensus        44 ~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n~~~~~~V~tdl~~---------~l~~--~~VD  112 (209)
T KOG3191|consen   44 PEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCNRVHIDVVRTDLLS---------GLRN--ESVD  112 (209)
T ss_pred             ceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhcCCccceeehhHHh---------hhcc--CCcc
Confidence            5677888999998877777766666778889999999888887776666778889998832         2222  6899


Q ss_pred             EEEECCCCCC
Q 040531           95 ILFNNAGVLG  104 (285)
Q Consensus        95 ~lv~~ag~~~  104 (285)
                      +++.|..+..
T Consensus       113 vLvfNPPYVp  122 (209)
T KOG3191|consen  113 VLVFNPPYVP  122 (209)
T ss_pred             EEEECCCcCc
Confidence            9999998864

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.01  E-value=1.4  Score=35.85  Aligned_cols=74  Identities=14%  Similarity=0.094  Sum_probs=50.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .++.++|-.|++.|.   .+..|+++|++|+.+|.++..++.+.+.....+..+.+..+|+.+..        +   .+.
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~la~~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~--------~---~~~   94 (195)
T TIGR00477        29 VAPCKTLDLGCGQGR---NSLYLSLAGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAAA--------L---NED   94 (195)
T ss_pred             CCCCcEEEeCCCCCH---HHHHHHHCCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhcc--------c---cCC
Confidence            457789999987663   55667778999999999988777666555444444666666764211        1   136


Q ss_pred             ccEEEECC
Q 040531           93 LDILFNNA  100 (285)
Q Consensus        93 id~lv~~a  100 (285)
                      +|+++.+.
T Consensus        95 fD~I~~~~  102 (195)
T TIGR00477        95 YDFIFSTV  102 (195)
T ss_pred             CCEEEEec
Confidence            89888764

Part of a tellurite-reducing operon tehA and tehB

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.01  E-value=0.38  Score=42.18  Aligned_cols=116  Identities=17%  Similarity=0.168  Sum_probs=70.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +.+.|+|+ |+||.+++..|+.++.  .++++|.+++..+-....+....   ..-..+..| .+.+           ..
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DL   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hh
Confidence            36889999 9999999999998873  69999998665554444442211   011122222 1111           12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ..-|++|-.||....     |  .++.   .++++.|..=.-.+.+.+.+.-   ..+.++.++-..
T Consensus        68 ~~aDiVvitAG~prK-----p--GmtR---~DLl~~Na~I~~~i~~~i~~~~---~d~ivlVvtNPv  121 (313)
T COG0039          68 KGADIVVITAGVPRK-----P--GMTR---LDLLEKNAKIVKDIAKAIAKYA---PDAIVLVVTNPV  121 (313)
T ss_pred             cCCCEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHHhhC---CCeEEEEecCcH
Confidence            468999999997532     1  1343   3457777765555555554432   256676666544

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.00  E-value=0.16  Score=46.42  Aligned_cols=87  Identities=14%  Similarity=0.155  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .|.+++|.|+++++|...+..+...|+   +|+++++++++++.+.+......  ........|..+.++..+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            478999999999999998776666554   69999998888765544221100  0111112243322233333332221


Q ss_pred             HcCCccEEEECCC
Q 040531           89 KHGRLDILFNNAG  101 (285)
Q Consensus        89 ~~~~id~lv~~ag  101 (285)
                       ...+|++|.++|
T Consensus       255 -g~g~D~vid~~g  266 (410)
T cd08238         255 -GQGFDDVFVFVP  266 (410)
T ss_pred             -CCCCCEEEEcCC
Confidence             125899999776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.00  E-value=0.14  Score=45.20  Aligned_cols=37  Identities=24%  Similarity=0.346  Sum_probs=33.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      +++++||.|+++++|.+++......|+.++.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            6899999999999999999999999999888877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.99  E-value=0.24  Score=43.32  Aligned_cols=113  Identities=16%  Similarity=0.149  Sum_probs=68.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCC---ceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           18 AIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSP---LVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +.|.|+ |++|.+++..++..|  ..++++|++.+........+.....   .......  .+.+           ....
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-----------~l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-----------DAAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-----------HhCC
Confidence            357887 679999999999998  6799999998887777766643211   1122211  1111           1246


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      -|++|.++|....     +  ..+.   .+.+..|+.-...+.+.+...   ...+.+++++...
T Consensus        67 aDiVIitag~p~~-----~--~~~R---~~l~~~n~~i~~~~~~~i~~~---~p~~~viv~sNP~  118 (300)
T cd00300          67 ADIVVITAGAPRK-----P--GETR---LDLINRNAPILRSVITNLKKY---GPDAIILVVSNPV  118 (300)
T ss_pred             CCEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccChH
Confidence            8999999997421     1  2233   344555554444444443332   2467788777644

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.99  E-value=0.13  Score=46.28  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH-HHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE-QDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~i~~~~~   91 (285)
                      .|.++||.|+ +++|...+..+...|+ .|+.+++++++.+.+ .++   +... +  .|..+. ++..+.+.++..  +
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATD-C--VNPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCE-E--EcccccchHHHHHHHHHhC--C
Confidence            5889999975 8999999998889999 688899888876544 333   2221 1  233332 234444443332  3


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      .+|+++.+.|
T Consensus       256 g~d~vid~~g  265 (368)
T cd08300         256 GVDYTFECIG  265 (368)
T ss_pred             CCcEEEECCC
Confidence            6999999877

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=94.98  E-value=0.27  Score=35.18  Aligned_cols=68  Identities=19%  Similarity=0.287  Sum_probs=48.8

Q ss_pred             CCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 040531           23 GARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNA  100 (285)
Q Consensus        23 as~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~a  100 (285)
                      |+|...+.+++.+ +.|  .+++.+|.+++.+....+...+.+.++.+++.|+.+..          ...++.|++++..
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~----------~~~~~~D~v~~~~   75 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLP----------FSDGKFDLVVCSG   75 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHH----------HHSSSEEEEEE-T
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCc----------ccCCCeeEEEEcC
Confidence            5566667777776 556  78999999999998888877666678999999997742          2345899999954


Q ss_pred             C
Q 040531          101 G  101 (285)
Q Consensus       101 g  101 (285)
                      .
T Consensus        76 ~   76 (101)
T PF13649_consen   76 L   76 (101)
T ss_dssp             T
T ss_pred             C
Confidence            4

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.98  E-value=0.062  Score=46.35  Aligned_cols=43  Identities=28%  Similarity=0.387  Sum_probs=37.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .+++||+++|.|-|.-+|+.++..|.+++++|.++..+...+.
T Consensus       153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~  195 (284)
T PRK14170        153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP  195 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            3789999999999999999999999999999998876554433

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.95  E-value=0.063  Score=46.64  Aligned_cols=44  Identities=23%  Similarity=0.280  Sum_probs=38.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA   54 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~   54 (285)
                      .+++||+++|.|-|.-+|+.++..|.++|++|.++..+...+++
T Consensus       154 i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~  197 (297)
T PRK14186        154 IDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS  197 (297)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            37899999999999999999999999999999998766554443

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.94  E-value=0.25  Score=41.83  Aligned_cols=38  Identities=21%  Similarity=0.418  Sum_probs=31.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~   48 (285)
                      +..+++.+|+|.|+ ||+|..++..|+..|.. +.++|.+
T Consensus        19 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        19 QEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            44578899999976 58999999999999955 7777654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.94  E-value=0.065  Score=46.17  Aligned_cols=42  Identities=26%  Similarity=0.367  Sum_probs=37.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+++||+++|.|-|.-+|+.++..|.+++++|.++..+...+
T Consensus       152 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l  193 (282)
T PRK14169        152 IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNL  193 (282)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCH
Confidence            368999999999999999999999999999999887655443

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.92  E-value=0.84  Score=36.50  Aligned_cols=77  Identities=17%  Similarity=0.218  Sum_probs=56.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..+++.+|=.|+++|.   ++..+++.+.+|+.++.+++..+...+.+...+.++.++.+|+.+..            .+
T Consensus        17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~   81 (179)
T TIGR00537        17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RG   81 (179)
T ss_pred             hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CC
Confidence            4567788888877764   45566667778999999999888777776655556888888875421            14


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      ..|.++.|.-+.
T Consensus        82 ~fD~Vi~n~p~~   93 (179)
T TIGR00537        82 KFDVILFNPPYL   93 (179)
T ss_pred             cccEEEECCCCC
Confidence            689999987553

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.92  E-value=0.18  Score=43.69  Aligned_cols=42  Identities=31%  Similarity=0.415  Sum_probs=36.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      ++++++|+|+++++|..++..+...|+.|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            688999999999999999999999999999998887665443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.92  E-value=0.064  Score=46.36  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=37.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+++||.++|.|-|.-+|+.++..|.+++++|.++..+...+
T Consensus       155 i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L  196 (288)
T PRK14171        155 PNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNL  196 (288)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            378999999999999999999999999999999887655443

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.88  E-value=0.17  Score=43.65  Aligned_cols=42  Identities=19%  Similarity=0.201  Sum_probs=36.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      ++++++|.|+++++|.+++......|+.|+.+++++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            689999999999999999999999999999998877765544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.87  E-value=0.25  Score=40.50  Aligned_cols=38  Identities=18%  Similarity=0.358  Sum_probs=31.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~   48 (285)
                      +..+++.+|+|.|+++ +|.++++.|+..|.. +.++|.+
T Consensus        14 q~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            3457889999998776 999999999999966 8887754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.86  E-value=1.3  Score=36.02  Aligned_cols=75  Identities=12%  Similarity=0.086  Sum_probs=52.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..++.+|-.|++.|.   .+..|+++|++|+.++.++...+.+.+.....+ .++.++..|+.+..        .   .+
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~--------~---~~   94 (197)
T PRK11207         29 VKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT--------F---DG   94 (197)
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC--------c---CC
Confidence            467889999988775   567788899999999998887776665554433 23666777764321        1   14


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      .+|+|+.+..
T Consensus        95 ~fD~I~~~~~  104 (197)
T PRK11207         95 EYDFILSTVV  104 (197)
T ss_pred             CcCEEEEecc
Confidence            6999988744

>PLN02602 lactate dehydrogenase

Probab=94.84  E-value=0.67  Score=41.51  Aligned_cols=115  Identities=13%  Similarity=0.075  Sum_probs=69.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +.+.|+|+ |.+|.+++..++..+.  .++++|.+++.++...-.+....   .... +..+ .+.+           ..
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~-----------~~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYA-----------VT  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHH-----------Hh
Confidence            68999996 9999999999998874  59999998877666665554321   1222 2211 1211           12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ..-|++|..||....     +  ..+..   +.+..|+.=.-.+.+.+.+.   ...+.+|+++-..
T Consensus       104 ~daDiVVitAG~~~k-----~--g~tR~---dll~~N~~I~~~i~~~I~~~---~p~~ivivvtNPv  157 (350)
T PLN02602        104 AGSDLCIVTAGARQI-----P--GESRL---NLLQRNVALFRKIIPELAKY---SPDTILLIVSNPV  157 (350)
T ss_pred             CCCCEEEECCCCCCC-----c--CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCch
Confidence            468999999997421     1  23333   44555554443444443332   2467788777543

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.84  E-value=0.2  Score=43.87  Aligned_cols=80  Identities=18%  Similarity=0.319  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++.+++|.|+++++|..++..+...|+.++++.++.++.+.+ .++   +... +  .|..+.+...+.+..... ...+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~~~~~~-~~~~  211 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKL---AAII-L--IRYPDEEGFAPKVKKLTG-EKGV  211 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE-E--EecCChhHHHHHHHHHhC-CCCc
Confidence            578999999999999999999999999988888877765544 222   2221 1  222222212222222211 1359


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |.++++.|
T Consensus       212 d~~i~~~~  219 (334)
T PTZ00354        212 NLVLDCVG  219 (334)
T ss_pred             eEEEECCc
Confidence            99999865

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.82  E-value=0.07  Score=46.00  Aligned_cols=43  Identities=26%  Similarity=0.411  Sum_probs=37.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .+++||+++|.|-|.-+|+.++..|.+++++|.++.++...++
T Consensus       153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~  195 (282)
T PRK14166        153 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  195 (282)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            3689999999999999999999999999999999887655443

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.81  E-value=0.29  Score=43.15  Aligned_cols=37  Identities=27%  Similarity=0.308  Sum_probs=34.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID   48 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~   48 (285)
                      .++.||++.|.|- |.||+++|+.+...|.+|+..+|.
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~  177 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTS  177 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCC
Confidence            5799999999997 889999999999999999999875

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.77  E-value=0.27  Score=44.38  Aligned_cols=38  Identities=21%  Similarity=0.413  Sum_probs=31.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID   48 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~   48 (285)
                      +..+++.+|+|.|+ ||+|.+++..|+..|. ++.++|.+
T Consensus        36 q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         36 QERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            34578889999987 5899999999999995 68888764

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=94.75  E-value=0.12  Score=43.32  Aligned_cols=36  Identities=31%  Similarity=0.498  Sum_probs=31.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEE-EEec
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVV-IADI   47 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~-~~~r   47 (285)
                      .++++++++|.| .|.+|+.+++.|.+.|++|+ +.+.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            468999999998 69999999999999999998 5554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.74  E-value=0.19  Score=43.81  Aligned_cols=80  Identities=18%  Similarity=0.138  Sum_probs=52.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      -++.+++|.|+++++|.+++..+...|+.++++.++.++.+.+ .++   +.+   ...|..+.+..+. +.+.. ....
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~-~~~~~-~~~~  207 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GAD---EVIDSSPEDLAQR-VKEAT-GGAG  207 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCC---EEecccchhHHHH-HHHHh-cCCC
Confidence            3678999999999999999999999999999988887765444 332   221   1122222222222 22221 1236


Q ss_pred             ccEEEECCC
Q 040531           93 LDILFNNAG  101 (285)
Q Consensus        93 id~lv~~ag  101 (285)
                      +|+++.+.|
T Consensus       208 ~d~vl~~~g  216 (323)
T cd05282         208 ARLALDAVG  216 (323)
T ss_pred             ceEEEECCC
Confidence            999999876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.73  E-value=0.26  Score=44.28  Aligned_cols=78  Identities=17%  Similarity=0.255  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCH-HHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLE-QDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~-~~i~~~~~~i~~~~~   91 (285)
                      +|.+++|.|+ +++|...+......|+ .|+.++++.++.+.+ +++   +.. .++  |..+. ++..+.+.++..  +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~-~~i--~~~~~~~~~~~~v~~~~~--~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVT-EFV--NPKDHDKPVQEVIAEMTG--G  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc-eEE--cccccchhHHHHHHHHhC--C
Confidence            5889999985 8999998888888898 699999888775544 333   222 112  33221 234444443332  3


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      .+|+++.+.|
T Consensus       257 ~~d~vid~~G  266 (369)
T cd08301         257 GVDYSFECTG  266 (369)
T ss_pred             CCCEEEECCC
Confidence            6999999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	285
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		6e-50
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-33
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-29
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-29
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-27
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-27
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-25
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		8e-25
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-24
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-24
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-23
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-23
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		5e-23
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-22
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-22
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-22
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-22
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		6e-22
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-22
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-21
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-21
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-21
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-21
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-21
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		6e-21
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		6e-21
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		7e-21
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		9e-21
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-21
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-20
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-20
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-20
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		2e-20
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-20
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-20
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-20
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		3e-20
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		3e-20
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-20
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-20
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-19
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-19
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-19
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-19
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		5e-19
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		5e-19
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-19
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-19
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		6e-19
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-19
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		7e-19
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-19
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		8e-19
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-18
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-18
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-18
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-18
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-18
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-18
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-18
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-18
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-18
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		8e-18
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-17
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-17
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-17
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		3e-17
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		4e-17
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		6e-17
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		6e-17
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		7e-17
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		9e-17
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-16
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-16
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-16
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-16
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-16
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-16
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		2e-16
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-16
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-16
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-16
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		5e-16
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-16
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		5e-16
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-16
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-16
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		8e-16
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		8e-16
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		9e-16
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		9e-16
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		9e-16
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-15
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-15
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-15
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-15
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-15
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		2e-15
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-15
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-15
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		6e-15
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		6e-15
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		8e-15
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-14
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-14
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-14
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-14
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-14
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-14
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		2e-14
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		2e-14
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-14
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-14
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-14
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-14
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-14
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		4e-14
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		4e-14
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-14
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		5e-14
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		5e-14
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-14
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		5e-14
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		5e-14
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		5e-14
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-14
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-14
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		7e-14
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		8e-14
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		9e-14
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-13
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-13
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-13
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-13
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-13
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-13
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-13
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-13
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-13
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-13
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-13
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-13
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-13
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		5e-13
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-13
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-13
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		6e-13
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		9e-13
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		1e-12
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-12
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		2e-12
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-12
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		4e-12
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		7e-12
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-11
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-11
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-11
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-11
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		3e-11
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-11
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-11
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-11
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		5e-11
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		6e-11
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		6e-11
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		8e-11
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		9e-11
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		1e-10
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		1e-10
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-10
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		2e-10
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-10
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-10
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		3e-10
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		3e-10
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		4e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		4e-10
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		4e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		5e-10
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		6e-10
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		6e-10
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		6e-10
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-10
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		7e-10
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		7e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		8e-10
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		8e-10
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		9e-10
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-09
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-09
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-09
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-09
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		2e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-09
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		2e-09
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-09
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-09
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-09
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-09
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		6e-09
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		6e-09
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-09
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		7e-09
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		8e-09
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		8e-09
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		9e-09
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-08
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		1e-08
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-08
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		2e-08
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		4e-08
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-08
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-08
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-07
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-07
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		1e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		1e-07
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-07
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		2e-07
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-07
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		3e-07
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		4e-07
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		6e-07
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-06
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		1e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-06
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		3e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		4e-06
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		6e-06
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		7e-06
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		8e-06
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		9e-06
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		2e-05
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		2e-05
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-05
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-05
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		3e-05
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		3e-05
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		3e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-05
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		3e-05
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		3e-05
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		3e-05
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		3e-05
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		1e-04
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-04
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		2e-04
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		2e-04
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		2e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-04
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-04
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		4e-04
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		5e-04
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		6e-04
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		7e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  194 bits (492), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 154/246 (62%), Gaps = 17/246 (6%)
Query: 33  RLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGR 92
           +LFV++GAKVV                     +++++HCDV+ ++D++NL++ TI+KHG+
Sbjct: 34  KLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHGK 92
Query: 93  LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIIS 152
           LDI+F N GVL   +   SI +    +F  ++ INV GA L  K+AA+VM+P + G I+ 
Sbjct: 93  LDIMFGNVGVL--STTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVF 150
Query: 153 TASVASLMGGLG-PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWK 211
           TAS++S   G G  H YT +KHA++GLT +   ELG+YGIRVNC+SP+ VA+ +L + + 
Sbjct: 151 TASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG 210
Query: 212 SCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLV 271
                +DS +           L    ANLKG  L+A D+A+A  YLA DESKY+SG NLV
Sbjct: 211 -----VDSSR--------VEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLV 257
Query: 272 VDGGFT 277
           +DGG+T
Sbjct: 258 IDGGYT 263

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 15/262 (5%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH--CDV 73
           ++ ++TGG  G+G AT       GAK+                     P    L    DV
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV 73
Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           S E  ++  +  T  + GR+D  FNNAG+ G Q+  +S   F A EFD ++ IN+RG  L
Sbjct: 74  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTES---FTAAEFDKVVSINLRGVFL 130
Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           G++   K+M  + SG +++TASV  + G      Y  +KH +VGLT+N+A E G+YGIR+
Sbjct: 131 GLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 190
Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEA 253
           N I+P  + T M+ N+ K     +D   P                N      +A +IA  
Sbjct: 191 NAIAPGAIWTPMVENSMKQ----LDPENPRKAAEEFIQ------VNPSKRYGEAPEIAAV 240
Query: 254 ALYLASDESKYISGHNLVVDGG 275
             +L SD++ Y++   + +DGG
Sbjct: 241 VAFLLSDDASYVNATVVPIDGG 262

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 30/263 (11%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK+A+V+GGARG+G + VR  V  GAKVV                        Y+H D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA---RYVHLD 61
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+     +  ++  ++  G L +L NNAG+L       +I D+   E+  I+ +N+ G  
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL----NIGTIEDYALTEWQRILDVNLTGVF 117
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG++   K M     G II+ +S+  L G +  H YT +K A+ GLTK+TA ELG  GIR
Sbjct: 118 LGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN I P  V T M    W   ED   +                      G   +  +++ 
Sbjct: 178 VNSIHPGLVKTPM--TDWVP-EDIFQTA--------------------LGRAAEPVEVSN 214
Query: 253 AALYLASDESKYISGHNLVVDGG 275
             +YLASDES Y +G   VVDGG
Sbjct: 215 LVVYLASDESSYSTGAEFVVDGG 237

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 127/274 (46%), Gaps = 41/274 (14%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXX-PLVTYLHC 71
           L+GK+A+VTG +RGIG A      K GA VV                          +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+  +D+ N++  T+   G++DIL NNAGV    +K   +      E+D +I  N++G 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGV----TKDNLLMRMKEEEWDTVINTNLKGV 117
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  K  ++ M+ +R G I++ ASV  + G  G   Y  +K  ++GLTK +A EL    I
Sbjct: 118 FLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNI 177
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLK----- 246
            VN I+P  +AT M         D +D                    N+K   LK     
Sbjct: 178 TVNAIAPGFIATDM--------TDVLDE-------------------NIKAEMLKLIPAA 210
Query: 247 ----ARDIAEAALYLASDESKYISGHNLVVDGGF 276
               A+DIA A  + ASD+SKYI+G  L VDGG 
Sbjct: 211 QFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 17/269 (6%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           +Y++L+ K+ IVTG   GIG A  + F  + + VV                      V  
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DVS ++D++  +  T   + R+D+L NNAG++   +    ++D     ++ ++ +N+
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSD---ELWERVLAVNL 117
Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
             A    +    +M+ +  G I++TAS+A + GG     YTV+KH ++GLT++ A   G 
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGD 177
Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKAR 248
            GIR   + P  V T++ + + K  E  M +              +  L +L     +  
Sbjct: 178 QGIRAVAVLPGTVKTNIGLGSSKPSELGMRT--------------LTKLMSLSSRLAEPE 223
Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           DIA   ++LASDE+ +++G  +VVDGG T
Sbjct: 224 DIANVIVFLASDEASFVNGDAVVVDGGLT 252

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 123/263 (46%), Gaps = 30/263 (11%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK+A+V+GGARG G + VR  V  GAKVV                        Y+H D
Sbjct: 5   LTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAA---RYVHLD 61
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+     +  ++  ++  G L +L NNAG+L       +I D+   E+  I+ +N+ G  
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL----NIGTIEDYALTEWQRILDVNLTGVF 117
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG++   K       G II+ +S+  L G +  H YT +K A+ GLTK+TA ELG  GIR
Sbjct: 118 LGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN I P  V T      W   ED   +                      G   +  +++ 
Sbjct: 178 VNSIHPGLVKTPX--TDWVP-EDIFQTA--------------------LGRAAEPVEVSN 214
Query: 253 AALYLASDESKYISGHNLVVDGG 275
             +YLASDES Y +G   VVDGG
Sbjct: 215 LVVYLASDESSYSTGAEFVVDGG 237

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 119/270 (44%), Gaps = 20/270 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           LEGKIAIVTG + GIG A   LF + GAKVV                         L  D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V  E   + L+ + + + G LD  FNNAG LG   +   I+      +   +  N+  A 
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE---ISSLSVEGWRETLDTNLTSAF 122
Query: 133 LGMKYAAKVMVPRRSGCIISTAS-VASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  KY    +     G +  T+S V    G  G   Y  SK  ++GL +  A ELG  GI
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 192 RVNCISPFGVATSM-LVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           RVN + P G  T     N   +  +                  V GL  LK +  +  +I
Sbjct: 183 RVNALLPGGTDTPANFANLPGAAPETRG--------------FVEGLHALKRIA-RPEEI 227
Query: 251 AEAALYLASDESKYISGHNLVVDGGFTTSK 280
           AEAALYLASD + +++G  L+ DGG + +K
Sbjct: 228 AEAALYLASDGASFVTGAALLADGGASVTK 257

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           K+AIVTGG+ GIG A V   V++GAKVV                     +  +   DV+ 
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN----------VSDHFKIDVTN 64
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E++++  +  T  K+GR+DIL NNAG+      H + T+     +  II +NV G+ L  
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEI----WRRIIDVNVNGSYLMA 120
Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           KY   VM+    G II+ ASV S        AY  SKHA++GLT++ A +     IR N 
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179
Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAAL 255
           + P  + T M++ A K     M+ G+              G  +  G   +  ++AE   
Sbjct: 180 VCPGTIMTPMVIKAAK-----MEVGEDENAVERKIEEW--GRQHPMGRIGRPEEVAEVVA 232
Query: 256 YLASDESKYISGHNLVVDGGF 276
           +LASD S +I+G  L VDGG 
Sbjct: 233 FLASDRSSFITGACLTVDGGL 253

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 128/280 (45%), Gaps = 27/280 (9%)
Query: 1   MNLNTEKKAYKT--LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXX 58
           ++L TE   +++  L  ++ IVTGG  GIG AT  LF K+GA VV               
Sbjct: 11  VDLGTENLYFQSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE 70
Query: 59  XXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                  V     DVS  +D ++ +  T +K GR+D+L NNAG  G      +I +    
Sbjct: 71  IGSKAFGV---RVDVSSAKDAESXVEKTTAKWGRVDVLVNNAG-FGTTGNVVTIPE---E 123
Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
            +D I  +NV+G  L  KY   V      G II+T S  +        AY  SK AI  L
Sbjct: 124 TWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL 183
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           T+  A +  K GIRVN ++P  + +      +   +D      P           +R   
Sbjct: 184 TRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKD------PAK---------LRSDF 228
Query: 239 NLKGVTLK---ARDIAEAALYLASDESKYISGHNLVVDGG 275
           N + V  +   A +IAEA L+LASD S++ +G  L VDGG
Sbjct: 229 NARAVXDRXGTAEEIAEAXLFLASDRSRFATGSILTVDGG 268

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXX---XXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           K+AI+TG + GIG AT  LF + GAKV                          V  +  D
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 66
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +     +++ T+ K G+LDIL NNAG     S+ K+ T      +D  + +N+R   
Sbjct: 67  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126
Query: 133 LGMKYAAKVMVPRRS---GCIISTASVASLMGGLGPHA------YTVSKHAIVGLTKNTA 183
              K A    VP  S   G I++ +S+AS     G HA      Y+++K AI   T+NTA
Sbjct: 127 ALTKKA----VPHLSSTKGEIVNISSIAS-----GLHATPDFPYYSIAKAAIDQYTRNTA 177
Query: 184 CELGKYGIRVNCISP------FGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
            +L ++GIRVN ISP      FG A  M     K     M + K C              
Sbjct: 178 IDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA----------- 226
Query: 238 ANLKGVTLKARDIAEAALYLASDE-SKYISGHNLVVDGG 275
               GV  + +DIAE   +LA  + S YI GH LVVDGG
Sbjct: 227 ----GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 261

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-VTYLHC 71
           L+GK AIVTG +RG+G+A        GA +V                     + V     
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV   +D++N++   +   GR+DIL NNAG+    ++   +      ++D+++  N++ A
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGI----TRDTLMLKMSEKDWDDVLNTNLKSA 118
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  K  +K+M+ ++SG II+  S+A ++G  G   Y  SK  ++G TK+ A E    GI
Sbjct: 119 YLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGI 178
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLK----A 247
             N ++P  + T M        +   D  K                  L  + LK     
Sbjct: 179 YCNAVAPGIIKTDM-------TDVLPDKVKEMY---------------LNNIPLKRFGTP 216
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
            ++A    +LASD+S YI+G  + +DGG 
Sbjct: 217 EEVANVVGFLASDDSNYITGQVINIDGGL 245

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXX-XXXPLVTYLHCDVS 74
           ++AIVTG + G G A    F+  G +V                        V  +  DV+
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E D+   I  T+ + G +D+L NNAG+ GN S+   +      +FD ++ +NVRG  LG
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGN-SEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            +     M+ + +G I++ ASVASL+   G  AYT SK A++ LTK+ A +    GIR N
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL-KARDIAEA 253
            + P  + T M    W+  +  +                 + LA +    +  A  +A+A
Sbjct: 182 AVCPGMIETPM--TQWRLDQPELRD---------------QVLARIPQKEIGTAAQVADA 224
Query: 254 ALYLASDESKYISGHNLVVDGGFT 277
            ++LA +++ Y++G  LV+DG +T
Sbjct: 225 VMFLAGEDATYVNGAALVMDGAYT 248

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 29/270 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           L  +IA+VTG +RGIG A        GAKV V                         +  
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS E +++ L    I + GRLD+L NNAG+    ++   +     +++ +++ +N+ G 
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGI----TRDTLLLRMKRDDWQSVLDLNLGGV 141
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  + AAK+M+ +RSG II+ ASV   MG  G   Y+ +K  ++GLTK  A EL   GI
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 192 RVNCISPFGVATSMLVN-AWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
            VN ++P  +AT M    A +   + +  G+                        +A ++
Sbjct: 202 TVNAVAPGFIATDMTSELAAEKLLEVIPLGRYG----------------------EAAEV 239
Query: 251 AEAALYLASDE-SKYISGHNLVVDGGFTTS 279
           A    +LA+D  + YI+G  + +DGG   +
Sbjct: 240 AGVVRFLAADPAAAYITGQVINIDGGLVMA 269

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 123/273 (45%), Gaps = 32/273 (11%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  L GK+AIVTG   GIG A  R     G  V+                       T +
Sbjct: 24  HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA----------ATKI 73
Query: 70  HC-------DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
            C       DVS EQ I  +++  ++  G +D L  NAGV+       S+ D    +FD 
Sbjct: 74  GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV----HLASLIDTTVEDFDR 129
Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           +I IN+RGA L  K+AA  M+ R  G I++ +S+A  +   G  AY +SK  I+ L++ T
Sbjct: 130 VIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRIT 189
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           A EL   GIR N + P  V T M   A    +  + +G                +A L+G
Sbjct: 190 AAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSM-----------IARLQG 238
Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                 ++A   ++L SD++  I+G   + DGG
Sbjct: 239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 25/280 (8%)
Query: 1   MNLNTEKKA---YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXX 57
           MNL +E K    Y   E K+A+VTG  RGIG    ++  K  + V+              
Sbjct: 27  MNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVD 86
Query: 58  XXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                    +    DVS +++I  +IN  +++H  +DIL NNAG+    ++         
Sbjct: 87  EIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI----TRDNLFLRMKN 142
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
           +E+++++R N+       +  +K M+  R G II+ +S+  L G +G   Y+ SK  ++G
Sbjct: 143 DEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG 202
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
            TK+ A EL    I VN I+P  +++ M     +  +  + S  P               
Sbjct: 203 FTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA-------------- 248
Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               G      ++A  A +L+SD+S YI+G   V+DGG +
Sbjct: 249 ----GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS 284

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 118/270 (43%), Gaps = 29/270 (10%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K LE K+A+VT    GIG A  R   + GA VV                      VT   
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGV---LGNQSKHKSITDFDANEFDNIIRIN 127
           C V   +D + L+ + ++ HG +DIL +NA V    GN      I D     +D I+ +N
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN------IIDATEEVWDKILHVN 123
Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASL--MGGLGPHAYTVSKHAIVGLTKNTACE 185
           V+   L  K     M  R  G ++  +SV +      LGP  Y VSK A++GLTKN A E
Sbjct: 124 VKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNLAVE 181
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
           L    IRVNC++P  + T+     W      MD  +            +R L N      
Sbjct: 182 LAPRNIRVNCLAPGLIKTNFSQVLW------MDKAR---KEYMKESLRIRRLGN------ 226
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
              D A    +L S+++ YI+G  +VV GG
Sbjct: 227 -PEDCAGIVSFLCSEDASYITGETVVVGGG 255

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L  K+A+VT    GIG A  R   + GA VV                      VT   C 
Sbjct: 13  LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCH 72
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V   +D + L+   +  HG +DIL +NA V        SI D     +D  + INV+  A
Sbjct: 73  VGKAEDRERLVATAVKLHGGIDILVSNAAV---NPFFGSIMDVTEEVWDKTLDINVKAPA 129
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  K     M  R  G ++  +S+A+     G   Y VSK A++GLTK  A EL    IR
Sbjct: 130 LMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIR 189
Query: 193 VNCISPFGVATSMLVNAW--KSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           VNC++P  + TS     W  K  E+ M                +R L        +  D 
Sbjct: 190 VNCLAPGLIKTSFSRMLWMDKEKEESMKE-----------TLRIRRLG-------EPEDC 231
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A    +L S+++ YI+G  +VV GG
Sbjct: 232 AGIVSFLCSEDASYITGETVVVGGG 256

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 28/265 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+ K  ++TG A GIG AT+ LF K GA++V                    P+V     D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH-PVVX----D 57
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    ++      ++  GRLD + + AG+  +    K   +    +++ ++R+N+ G+ 
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLE----DWELVLRVNLTGSF 113
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  K A++    +  G I+ TAS   L G LG   Y  S   +VGLT+  A ELG++GIR
Sbjct: 114 LVAKAASEAXREKNPGSIVLTASRVYL-GNLGQANYAASXAGVVGLTRTLALELGRWGIR 172
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN ++P  + T       +   +   +  P                   G   K  ++A 
Sbjct: 173 VNTLAPGFIETRXTAKVPEKVREKAIAATPL------------------GRAGKPLEVAY 214
Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           AAL+L SDES +I+G  L VDGG T
Sbjct: 215 AALFLLSDESSFITGQVLFVDGGRT 239

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  LEGK+A+VTG +RGIG+A   L  + GAKV+                     +  YL
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA----------ISDYL 56
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    +V+  + I+ ++     + G +DIL NNAG+    ++   +      E+ +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI----TRDNLLMRMKEEEWSD 112
Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           I+  N+       K   + M+ +R G II+  SV   MG  G   Y  +K  ++G TK+ 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           A E+   G+ VN ++P  + T M     K+  D   +                 LA +  
Sbjct: 173 AREVASRGVTVNTVAPGAIETDMT----KALNDEQRTAT---------------LAQVPA 213
Query: 243 VTL-KARDIAEAALYLASDESKYISGHNLVVDGGF 276
             L   R+IA A  +LAS E+ YI+G  L V+GG 
Sbjct: 214 GRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 23/262 (8%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY-LHCDVS 74
           K A+VTG +RGIG +      + G  V                      + ++ +  +V+
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
              +++ +I   +S+ G LD+L NNAG+    ++   +      E+D++I  N++G    
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGI----TRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           ++ A   M+ +RSG II+ +SV   +G  G   Y  +K  ++GLTK+ A EL   GI VN
Sbjct: 127 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 186
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAA 254
            ++P  + + M        ++ M +  P              LA     T    DIA   
Sbjct: 187 AVAPGFIVSDMTDALSDELKEQMLTQIP--------------LARFGQDT----DIANTV 228
Query: 255 LYLASDESKYISGHNLVVDGGF 276
            +LASD++KYI+G  + V+GG 
Sbjct: 229 AFLASDKAKYITGQTIHVNGGM 250

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  LEGK+A+VTG +RGIG+A   L  + GAKV+                     +  YL
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA----------ISDYL 56
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    +V+  + I+ ++     + G +DIL NNAG+    ++   +      E+ +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI----TRDNLLMRMKEEEWSD 112
Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           I+  N+       K   + M+ +R G II+  SV   MG  G   Y  +K  ++G TK+ 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           A E+   G+ VN ++P  + T M     K+  D   +                 LA +  
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT----KALNDEQRTAT---------------LAQVPA 213
Query: 243 VTL-KARDIAEAALYLASDESKYISGHNLVVDGGF 276
             L   R+IA A  +LAS E+ YI+G  L V+GG 
Sbjct: 214 GRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 19/276 (6%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVX------------XXXXXXXXXXXXXXXX 60
           +EGK+A +TG ARG G +      + GA ++                             
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 61  XXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                +     DV     +Q  ++  +++ GRLDI+  NA +    S+   +   D   +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL---ASEGTRLNRMDPKTW 142
Query: 121 DNIIRINVRGAALGMKYA-AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
            ++I +N+ GA +  + A   +M  +R G I+ T+S+  L G      Y  SKH + GL 
Sbjct: 143 RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLM 202
Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLAN 239
           +  A ELG   IRVN + P  VAT ML+N         D   P            R +  
Sbjct: 203 RTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS---RQMHV 259
Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           L    ++  DI+ A L+L SD+++YI+G +L VDGG
Sbjct: 260 LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY-LHC 71
           L G++A+VTGG+RG+G    +   + G  VV                     + T    C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS  ++++ L+     K G+LD + N AG+    ++     +F  +EF  +I +N+ G 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI----NRRHPAEEFPLDEFRQVIEVNLFGT 134
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKY 189
               + A  ++    +  II+  S+ ++     P+  AY  SK  +  LTK  A E G+Y
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSL-TVEEVTMPNISAYAASKGGVASLTKALAKEWGRY 193
Query: 190 GIRVNCISPFGVATSMLVNAWKSCE--DCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
           GIRVN I+P    T M    +   E  D M    P                   G T   
Sbjct: 194 GIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL------------------GRTGVP 235
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            D+   A++LAS+E+KY++G  + VDGG+T
Sbjct: 236 EDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  LEGK+A+VTG +RGIG+A   L  + GAKV+                     +  YL
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA----------ISDYL 56
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    +V+  + I+ ++     + G +DIL NNAG+    ++   +      E+ +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI----TRDNLLMRMKEEEWSD 112
Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           I+  N+       K   + M+ +R G II+  SV   MG  G   +  +K  ++G TK+ 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSM 172
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           A E+   G+ VN ++P  + T M     K+  D   +                 LA +  
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT----KALNDEQRTAT---------------LAQVPA 213
Query: 243 VTL-KARDIAEAALYLASDESKYISGHNLVVDGGF 276
             L   R+IA A  +LAS E+ YI+G  L V+GG 
Sbjct: 214 GRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 120/268 (44%), Gaps = 25/268 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK+AI+TGG  GIG A    FV+ GAKV+                     +  + H D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQH-D 62
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            S E     L + T    G +  L NNAG+  N+S  ++ T     E+  ++ +N+ G  
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT----AEWRKLLAVNLDGVF 118
Query: 133 LGMKYAAKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA--CELGKY 189
            G +   + M  +  G  II+ +S+   +G     AY  SK A+  ++K+ A  C L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            +RVN + P G   + LV+     E+ M                        G   +  D
Sbjct: 179 DVRVNTVHP-GYIKTPLVDDLPGAEEAMSQRTKTPM----------------GHIGEPND 221
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA   +YLAS+ESK+ +G   VVDGG+T
Sbjct: 222 IAYICVYLASNESKFATGSEFVVDGGYT 249

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
            EGKIA+VTG +RGIG A        GAKV+                         L  +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK---GLMLN 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    I++++    ++ G +DIL NNAG+    ++   +      E+++II  N+    
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGI----TRDNLLMRMKDEEWNDIIETNLSSVF 115
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K   + M+ +R G II+  SV   MG  G   Y  +K  ++G +K+ A E+   GI 
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGIT 175
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL-KARDIA 251
           VN ++P  + T M     ++  D   +G                LA +    L  A++IA
Sbjct: 176 VNVVAPGFIETDMT----RALSDDQRAGI---------------LAQVPAGRLGGAQEIA 216
Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
            A  +LASDE+ YI+G  L V+GG 
Sbjct: 217 NAVAFLASDEAAYITGETLHVNGGM 241

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 120/268 (44%), Gaps = 25/268 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK+AI+TGG  GIG A    FV+ GAKV+                     +  + H D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQH-D 62
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            S E     L + T    G +  L NNAG+  N+S  ++ T     E+  ++ +N+ G  
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT----AEWRKLLAVNLDGVF 118
Query: 133 LGMKYAAKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA--CELGKY 189
            G +   + M  +  G  II+ +S+   +G     AY  SK A+  ++K+ A  C L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            +RVN + P G   + LV+     E+ M                        G   +  D
Sbjct: 179 DVRVNTVHP-GYIKTPLVDDLPGAEEAMSQRTKTPM----------------GHIGEPND 221
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA   +YLAS+ESK+ +G   VVDGG+T
Sbjct: 222 IAYICVYLASNESKFATGSEFVVDGGYT 249

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 116/266 (43%), Gaps = 24/266 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK  I+TGGARG+G    R  V  GA+VV                        Y H D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA---ARYQHLD 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V++E+D Q ++     + G +D L NNAG+    S    +       F  ++ IN+ G  
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGI----STGMFLETESVERFRKVVEINLTGVF 115
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +GMK     M     G I++ +S A LMG     +Y  SK  + GL+K  A ELG   IR
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN + P    T M      + E  +  G+               + N  G      +IA 
Sbjct: 176 VNSVHPGMTYTPM------TAETGIRQGEGNYPNTPMGR-----VGNEPG------EIAG 218
Query: 253 AALYLASDESKYISGHNLVVDGGFTT 278
           A + L SD S Y++G  L VDGG+TT
Sbjct: 219 AVVKLLSDTSSYVTGAELAVDGGWTT 244

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 41/275 (14%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  LEGK+A+VTG +RGIG+A   L  + GAKV+                     +  YL
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA----------ISDYL 56
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    +V+  + I+ ++     + G +DIL NNA +    ++   +      E+ +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAI----TRDNLLMRMKEEEWSD 112
Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           I+  N+       K   + M+ +R G II+  SV   MG  G   Y  +K  ++G TK+ 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           A E+   G+ VN ++P  + T M     K+  D   +                 LA +  
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT----KALNDEQRTAT---------------LAQVPA 213
Query: 243 VTL-KARDIAEAALYLASDESKYISGHNLVVDGGF 276
             L   R+IA A  +LAS E+ YI+G  L V+GG 
Sbjct: 214 GRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           YK LEGK+ ++TG + G+G++    F    AKVV                          
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK-SITDFDANEFDNIIRIN 127
           +  DV++E D+ NL+   I + G+LD++ NNAG+    S H+ S++D     ++ +I  N
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD-----WNKVIDTN 116
Query: 128 VRGAALGMKYAAKVMVPRR-SGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           + GA LG + A K  V     G +I+ +SV   +   L  H Y  SK  +  +TK  A E
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTKTLALE 175
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
               GIRVN I P  + T +    +   E   D               V  +  + G   
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------------VESMIPM-GYIG 219
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +  +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 220 EPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 115/270 (42%), Gaps = 25/270 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK  I+TGGARG+G    R  V  GA+VV                        Y H D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA---ARYQHLD 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V++E+D Q ++     + G +D L NNAG+    S    +       F  ++ IN+ G  
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGI----STGMFLETESVERFRKVVEINLTGVF 115
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +GMK     M     G I++ +S A LMG     +Y  SK  + GL+K  A ELG   IR
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN + P    T M      + E  +  G+                    G   +  +IA 
Sbjct: 176 VNSVHPGMTYTPM------TAETGIRQGEGNYPNTPM------------GRVGEPGEIAG 217
Query: 253 AALYLASDESKYISGHNLVVDGGFTTSKNC 282
           A + L SD S Y++G  L VDGG+TT    
Sbjct: 218 AVVKLLSDTSSYVTGAELAVDGGWTTGPTV 247

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 41/275 (14%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  LEGK+A+VTG +RGIG+A   L  + GAKV+                     +  YL
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA----------ISDYL 56
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    +V+  + I+ ++     + G +DIL NNA +    ++   +      E+ +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNADI----TRDNLLMRMKEEEWSD 112
Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           I+  N+       K   + M+ +R G II+  SV   MG  G   Y  +K  ++G TK+ 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           A E+   G+ VN ++P  + T M     K+  D   +                 LA +  
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT----KALNDEQRTAT---------------LAQVPA 213
Query: 243 VTL-KARDIAEAALYLASDESKYISGHNLVVDGGF 276
             L   R+IA A  +LAS E+ YI+G  L V+GG 
Sbjct: 214 GRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 131/266 (49%), Gaps = 26/266 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK+ I+T  A+GIG+A    F + GAKV+                    P +     D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----PGIQTRVLD 58
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ ++ I    N    +  RLD+LFN AG +     H ++ D +  ++D  + +NVR   
Sbjct: 59  VTKKKQIDQFAN----EVERLDVLFNVAGFV----HHGTVLDCEEKDWDFSMNLNVRSMY 110
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
           L +K     M+ ++SG II+ +SVAS + G+     Y+ +K A++GLTK+ A +  + GI
Sbjct: 111 LMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
           R NC+ P  V T  L       E     G P          L R      G    A +IA
Sbjct: 171 RCNCVCPGTVDTPSLQ------ERIQARGNP---EEARNDFLKR---QKTGRFATAEEIA 218
Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
              +YLASDES Y++G+ +++DGG++
Sbjct: 219 MLCVYLASDESAYVTGNPVIIDGGWS 244

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
            EGKIA+VTG +RGIG A        GAKV+                         L  +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK---GLMLN 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    I++++    ++ G +DIL NNAG+    ++   +      E+++II  N+    
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGI----TRDNLLMRMKDEEWNDIIETNLSSVF 115
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K   + M+ +R G II+  SV   MG  G   +  +K  ++G +K+ A E+   GI 
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGIT 175
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL-KARDIA 251
           VN ++P  + T M     ++  D   +G                LA +    L  A++IA
Sbjct: 176 VNVVAPGFIETDMT----RALSDDQRAGI---------------LAQVPAGRLGGAQEIA 216
Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
            A  +LASDE+ YI+G  L V+GG 
Sbjct: 217 NAVAFLASDEAAYITGETLHVNGGM 241

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 124/279 (44%), Gaps = 12/279 (4%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXX 60
           ++L TE   +++   K A++TG   GIG A  R   K GA +V                 
Sbjct: 11  VDLGTENLYFQSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV 70
Query: 61  XXXPLVTYLH--CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                 T LH   D +   +I +       + G  DIL NNAGV   Q   K I DF   
Sbjct: 71  AGLSSGTVLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGV---QFVEK-IEDFPVE 126
Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           ++D II +N+  +   ++ A      +  G II+ AS   L+      AY  +KH I GL
Sbjct: 127 QWDRIIAVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGL 186
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           TK  A E+ + G+ VN I P  V T ++    K   D   + +            ++G  
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPLVE---KQIPDQART-RGITEEQVINEVXLKGQP 242
Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             K +T++   +A  ALYLA D++  I+G ++  DGG+T
Sbjct: 243 TKKFITVE--QVASLALYLAGDDAAQITGTHVSXDGGWT 279

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           YK LEGK+ ++TG + G+G++    F    AKVV                          
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK-SITDFDANEFDNIIRIN 127
           +  DV++E D+ NL+   I + G+LD++ NNAG+    S H+ S++D     ++ +I  N
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSD-----WNKVIDTN 116
Query: 128 VRGAALGMKYAAKVMVPRR-SGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           + GA LG + A K  V     G +I+ +SV   +   L  H Y  SK  +  +T+  A E
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETLALE 175
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
               GIRVN I P  + T +    +   E   D               V  +  + G   
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------------VESMIPM-GYIG 219
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +  +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 220 EPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           YK LEGK+ ++TG + G+G++    F    AKVV                          
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK-SITDFDANEFDNIIRIN 127
           +  DV++E D+ NL+   I + G+LD++ NNAG+    S H+ S++D     ++ +I  N
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD-----WNKVIDTN 116
Query: 128 VRGAALGMKYAAKVMVPRR-SGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           + GA LG + A K  V     G +I+ +SV   +   L  H Y  SK  +  +T+  A E
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETLALE 175
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
               GIRVN I P  + T +    +   E   D               V  +  + G   
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------------VESMIPM-GYIG 219
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +  +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 220 EPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           YK LEGK+ ++TG + G+G++    F    AKVV                          
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK-SITDFDANEFDNIIRIN 127
           +  DV++E D+ NL+   I + G+LD++ NNAG+    S H+ S++D     ++ +I  N
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD-----WNKVIDTN 116
Query: 128 VRGAALGMKYAAKVMVPRR-SGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           + GA LG + A K  V     G +I+ +SV   +   L  H Y  SK  +  +T+  A E
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETLALE 175
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
               GIRVN I P  + T +    +   E   D               V  +  + G   
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------------VESMIPM-GYIG 219
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +  +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 220 EPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 24/278 (8%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVX------------XXXXXXXXXXXXXXXX 60
           L+GK+A +TG ARG G        + GA +V                             
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 61  XXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                +     DV     +Q +++  +++ G +DIL +N G+  NQ +  S+TD    ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI-SNQGEVVSLTD---QQW 159
Query: 121 DNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
            +I++ N+ GA    +     M+ R + G +I  +S   L G  G   Y  SKH + GL 
Sbjct: 160 SDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLM 219
Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXX--XXXXXXXLVRGL 237
            + A E+G++ IRVN ++P  V T M +N     E  +    P            L   L
Sbjct: 220 LSLANEVGRHNIRVNSVNPGAVNTEMALN-----EKLLKMFLPHLENPTREDAAELFSQL 274
Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             L    ++  D++ A  +LASDE++YI G  + VDGG
Sbjct: 275 TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K   GK+ +VTG    IG AT     + G  +                            
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ E+ +   ++  +   G++D LFNNAG    Q     + D+ +++F  ++ INV G
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY---QGAFAPVQDYPSDDFARVLTINVTG 119
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A   +K  ++ M+ +  G I++TAS+A + G     AY  SK AI+ LT+  A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179
Query: 191 IRVNCISP 198
           IRVN ISP
Sbjct: 180 IRVNAISP 187

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 117/268 (43%), Gaps = 14/268 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH-- 70
           L+GK+A+VTG   GIG          GA +V                      V  L+  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVR 129
            D+S  + ++ L++  + + GR+DIL NNAG+     +H + I DF   ++D I+ +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALNLS 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               G   A   M  +  G II+ AS   L+      AY  +KH +VG TK TA E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           GI  N I P  V T ++    +     +               L     +L+ VT     
Sbjct: 177 GITANAICPGWVRTPLV----EKQISALAEKNGVDQETAARELLSEKQPSLQFVT--PEQ 230
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +   A++LASD +  I+G  + VDGG+T
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +L+GKIA+VTG + GIG A    + K GA +V                           C
Sbjct: 31  SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVC 90
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+ E  IQ ++    S+ G +DIL NNAG++    +   + +  A +F  +I I++   
Sbjct: 91  DVTDEDGIQAMVAQIESEVGIIDILVNNAGII----RRVPMIEMTAAQFRQVIDIDLNAP 146
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            +  K     M+ +  G II+  S+ S +G     AY  +K  +  LTKN A E G+  I
Sbjct: 147 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 206
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
           + N I P  +AT       +  +D   S  P            R          +A D+ 
Sbjct: 207 QCNGIGPGYIATPQTAPLRELQKD--GSRHPFDQFIIAKTPAAR--------WGEAEDLM 256
Query: 252 EAALYLASDESKYISGHNLVVDGG 275
             A++LASD S +++GH L VDGG
Sbjct: 257 GPAVFLASDASNFVNGHILYVDGG 280

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 117/268 (43%), Gaps = 14/268 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH-- 70
           L+GK+A+VTG   GIG          GA +V                      V  L+  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVR 129
            D+S  + ++ L++  + + GR+DIL NNAG+     +H + I DF   ++D I+ +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALNLS 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               G   A   M  +  G II+ AS   L+      AY  +KH +VG TK TA E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           GI  N I P G   S LV    S    +               L     +L+ VT     
Sbjct: 177 GITANAICP-GWVRSPLVEKQIS---ALAEKNGVDQETAARELLSEKQPSLQFVT--PEQ 230
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +   A++LASD +  I+G  + VDGG+T
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 33/262 (12%)
Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVS 74
           G+  +VTGG+ GIG A    F + GA+VV                    P +     D++
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH------PRIRREELDIT 64
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
             Q +Q L         RLD+L NNAG+       +   ++D   F+ ++R+N+  A L 
Sbjct: 65  DSQRLQRLFEAL----PRLDVLVNNAGI------SRDREEYDLATFERVLRLNLSAAMLA 114
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            + A + ++ +R G I++ AS+ S  G     AY+ SK AIV LT++ ACE     IRVN
Sbjct: 115 SQLA-RPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVN 173
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAA 254
            I+P  + T +        E                  L R          +A ++A AA
Sbjct: 174 AIAPGWIDTPLGAGLKADVE--------ATRRIMQRTPLAR--------WGEAPEVASAA 217
Query: 255 LYLASDESKYISGHNLVVDGGF 276
            +L    + +++G  L VDGG+
Sbjct: 218 AFLCGPGASFVTGAVLAVDGGY 239

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 120/268 (44%), Gaps = 14/268 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVT--YLH 70
           L+GK A+VTG   GIG A      K GA VV                      V   YL+
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVR 129
            D+S  Q  ++ I       G LDIL NNAG+     +H + I +F  ++++ II +N+ 
Sbjct: 62  ADLSDAQATRDFIAKAAEALGGLDILVNNAGI-----QHTAPIEEFPVDKWNAIIALNLS 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               G   A  +M  +  G II+ AS   L+  +   AY  +KH +VGLTK TA E    
Sbjct: 117 AVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGK 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           GI  N I P  V T ++    +   + +   K           L     +L+ VT     
Sbjct: 177 GITCNAICPGWVRTPLV----EKQIEAISQQKGIDIEAAARELLAEKQPSLQFVT--PEQ 230
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +  AA++L+S  +  ++G  L +DGG+T
Sbjct: 231 LGGAAVFLSSAAADQMTGTTLSLDGGWT 258

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 22/270 (8%)
Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVS 74
           GK  +VTGGARGIG A  + F + GA V                         +   D+ 
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG------AFFQVDLE 59
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E++    +       GR+D+L NNA +    +   S       E+  ++ +N+      
Sbjct: 60  DERERVRFVEEAAYALGRVDVLVNNAAI----AAPGSALTVRLPEWRRVLEVNLTAPMHL 115
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
              AA+ M     G I++ ASV  L       AY  SK  +V LT++ A +L    IRVN
Sbjct: 116 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 175
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAA 254
            ++P  +AT  ++ A     D   + +            +  L  L     K  ++AEA 
Sbjct: 176 AVAPGAIATEAVLEAIALSPDPERTRRDWED--------LHALRRLG----KPEEVAEAV 223
Query: 255 LYLASDESKYISGHNLVVDGGFTTSKNCVG 284
           L+LAS+++ +I+G  L VDGG T S    G
Sbjct: 224 LFLASEKASFITGAILPVDGGMTASFMMAG 253

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 27/270 (10%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  L  K+ IVTG + GIG A    FV  G+KV+                        ++
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK-----------YDHI 51
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            CDV+    ++  I+    ++G + +L NNAG+      +  I      E+  II +N+ 
Sbjct: 52  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI----ESYGKIESMSMGEWRRIIDVNLF 107
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G     K+A   M+  R   I++ +SV + +      AY  SKHA++GLTK+ A +    
Sbjct: 108 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL 167
Query: 190 GIRVNCISPFGVATSMLVNA--WKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
            +R N + P  + T ++  A   +   D M   K              G  +      K 
Sbjct: 168 -LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEW---------GHEHPMQRIGKP 217
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +++A A  +LAS E+ +I+G  L VDGG +
Sbjct: 218 QEVASAVAFLASREASFITGTCLYVDGGLS 247

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 22/269 (8%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           KTL+ ++AIVTG +RGIG A      + GA V+                           
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            +V+    +  L+  T+ + G L++L NNAG+  +Q   +   D    E+D +I  N++ 
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD----EWDAVIDTNLKA 139
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                +   + M+  R G I++  SV    G  G   Y  +K  + G+T+  A E+G  G
Sbjct: 140 VFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           I VNC++P  + T M     +  +  + +  P                   G      DI
Sbjct: 200 ITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPL------------------GRLGSPEDI 241
Query: 251 AEAALYLASDESKYISGHNLVVDGGFTTS 279
           A A  +LAS ++ YI+G  L V+GG   S
Sbjct: 242 AHAVAFLASPQAGYITGTTLHVNGGMFMS 270

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 27/270 (10%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  L  K+ IVTG + GIG A    FV  G+KV+                        ++
Sbjct: 10  FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK-----------YDHI 58
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            CDV+    ++  I+    ++G + +L NNAG+      +  I      E+  II +N+ 
Sbjct: 59  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI----ESYGKIESMSMGEWRRIIDVNLF 114
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G     K+A   M+  R   I++ +SV + +      AY  SKHA++GLTK+ A +    
Sbjct: 115 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL 174
Query: 190 GIRVNCISPFGVATSMLVNA--WKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
            +R N + P  + T ++  A   +   D M   K              G  +      K 
Sbjct: 175 -LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEW---------GHEHPMQRIGKP 224
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +++A A  +LAS E+ +I+G  L VDGG +
Sbjct: 225 QEVASAVAFLASREASFITGTCLYVDGGLS 254

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  LEGK+A+VTG +RGIG+A   L  + GAKV+                     +  YL
Sbjct: 4   FXNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA----------ISDYL 53
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGV----LGNQSKHKSITDFDAN 118
                    +V+  + I+ ++     + G +DIL NNAG+    L  + K +  +D    
Sbjct: 54  GDNGKGXALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXET 113
Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
              +I R++        K   +    +R G II+  SV    G  G   Y  +K  ++G 
Sbjct: 114 NLTSIFRLS--------KAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGF 165
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           TK+ A E+   G+ VN ++P  + T    +  K+  D   +                 LA
Sbjct: 166 TKSXAREVASRGVTVNTVAPGFIET----DXTKALNDEQRTAT---------------LA 206
Query: 239 NLKGVTL-KARDIAEAALYLASDESKYISGHNLVVDGG 275
            +    L   R+IA A  +LAS E+ YI+G  L V+GG
Sbjct: 207 QVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 117/268 (43%), Gaps = 14/268 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH-- 70
           L+GK+A+VTG   GIG          GA +V                      V  L+  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS-ITDFDANEFDNIIRINVR 129
            D+S  + ++ L++  + + GR+DIL NNAG+     +H + I DF   ++D I+ +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALNLS 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               G   A   M  +  G II+ AS   L+      AY  +KH +VG TK TA E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           GI  N I P G   + LV    S    +               L     +L+ VT     
Sbjct: 177 GITANAICP-GWVRAPLVEKQIS---ALAEKNGVDQETAARELLSEKQPSLQFVT--PEQ 230
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +   A++LASD +  I+G  + VDGG+T
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVX-----XXXXXXXXXXXXXXXXXXXPLVTYL 69
           GK+A ++G ARG G +      + GA ++                          LV  L
Sbjct: 15  GKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDL 74
Query: 70  -------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    DV   + +++ ++  + + GRLDI+  NAGV  +  K   I D   N + +
Sbjct: 75  DRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRD---NVWQD 131
Query: 123 IIRINVRGAALGMKYAAKVMVPR-----RSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
           +I IN+     G+ +  K  VP      R G I+ T+SV           Y  +KH ++G
Sbjct: 132 MIDINL----TGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIG 187
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVN--AWKSCEDCMDSGKPCXXXXXXXXXLVR 235
           L +  A ELG + IRVN + P  V+T+M++N   ++     +++  P          + +
Sbjct: 188 LMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGP-----DDFAPISQ 242
Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            +  L    + A DI+ A L+LASDES+Y++G +L VD G
Sbjct: 243 MMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 44/271 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK  +VTG A GIG A + LF + GA +V                      V     D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV---AD 60
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT-DFDANEFDNIIRINVRGA 131
           VS  + ++ +    + + GRL  + + AGV      H +++ +     ++ ++R+N+ G+
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGV-----AHSALSWNLPLEAWEKVLRVNLTGS 115
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  + A +V+     G ++ T SVA L G  G   Y   K  +VGL +  A EL + G+
Sbjct: 116 FLVARKAGEVL--EEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGV 172
Query: 192 RVNCISPFGVATSMLVN----AWKS---CEDCMDSGKPCXXXXXXXXXLVRGLANLKGVT 244
           RVN + P  + T M       AW+          +G+P                      
Sbjct: 173 RVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRP---------------------- 210
Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGG 275
               ++A+AAL+L S+ES YI+G  L VDGG
Sbjct: 211 ---EEVAQAALFLLSEESAYITGQALYVDGG 238

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 29/264 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK +++TG + GIG A  RL  K G+KV+                     +     C+
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV---CN 68
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ +++  NLI    SK   LDIL  NAG+  +    +        +FD +I IN++   
Sbjct: 69  LANKEECSNLI----SKTSNLDILVCNAGITSDTLAIR----MKDQDFDKVIDINLKANF 120
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +  + A K M+ +R G II+ +S+  + G  G   Y  SK  ++G+TK+ + E+   GI 
Sbjct: 121 ILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN ++P  + + M     +   + +    P                   G      D+A 
Sbjct: 181 VNAVAPGFIKSDMTDKLNEKQREAIVQKIPL------------------GTYGIPEDVAY 222
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
           A  +LAS+ + YI+G  L V+GG 
Sbjct: 223 AVAFLASNNASYITGQTLHVNGGM 246

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 26/268 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK A++TG + GIG+     + + GA+V                          + CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    ++ +++    + G +DI   NAG++  Q+    + D    EF  I   NV G  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA----MLDMPLEEFQRIQDTNVTGVF 145
Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHA--YTVSKHAIVGLTKNTACELGKY 189
           L  + AA+ MV +   G II+TAS++  +  +      Y  SK A+V LTK  A EL  +
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH 205
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            IRVN +SP G   + LV          +   P                   G   +  +
Sbjct: 206 QIRVNSVSP-GYIRTELVEPLADYHALWEPKIPL------------------GRMGRPEE 246
Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +    LYLAS  S Y++G ++V+DGG+T
Sbjct: 247 LTGLYLYLASAASSYMTGSDIVIDGGYT 274

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY-LHCDVS 74
           K A+VTG +RGIG +      + G  V                      + ++ +  +V+
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
              +++  I   +S+ G LD+L NNAG+    ++   +      E+D++I  N++G    
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGI----TRDNLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           ++ A    + +RSG II+ +SV   +G  G   Y  +K  ++GLTK+ A EL   GI VN
Sbjct: 121 IQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 180
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAA 254
            ++P  + +          ++   +  P              LA     T    DIA   
Sbjct: 181 AVAPGFIVSDXTDALSDELKEQXLTQIP--------------LARFGQDT----DIANTV 222
Query: 255 LYLASDESKYISGHNLVVDGG 275
            +LASD++KYI+G  + V+GG
Sbjct: 223 AFLASDKAKYITGQTIHVNGG 243

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 17  IAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           + +VTG +RGIG+A      K G KV V                            DVS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E D++ ++   I   G +D++ NNAG+    ++   +     +++D +I +N+ G  L  
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGI----TRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118
Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           + A K+M+ +R G II+ ASV  L+G +G   Y  +K  ++G +K  A E     I VN 
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178
Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAAL 255
           + P  +A+ M     +  E  +    P                   G T +  ++A    
Sbjct: 179 VCPGFIASDMTAKLGEDMEKKILGTIPL------------------GRTGQPENVAGLVE 220
Query: 256 YLA-SDESKYISGHNLVVDGGF 276
           +LA S  + YI+G    +DGG 
Sbjct: 221 FLALSPAASYITGQAFTIDGGI 242

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 22/264 (8%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           LE K+AI+TG   GIG  T R+  + GA+VV                        +   D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGA---VHHVVD 65
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ E  ++ LI+ TI   GRLDI+ NNA    +      +T    + +D+   +N RG  
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAA--HSDPADMLVTQMTVDVWDDTFTVNARGTM 123
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  KYA   ++    G I++ +S  +        AY  +K AI  LT+  A + G++G+R
Sbjct: 124 LMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVR 183
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
            N I+P  V T  L           + G P           +    +L G   +  +IAE
Sbjct: 184 CNAIAPGLVRTPRL-----------EVGLPQPIVD------IFATHHLAGRIGEPHEIAE 226
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
              +LASD + +I+G  +  D G 
Sbjct: 227 LVCFLASDRAAFITGQVIAADSGL 250

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 22/270 (8%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           Y  L+ K+ ++TGG+ G+G A    F +  AKVV                          
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+ E+D+ NL+   I + G LD++ NNAGV      H    +   + ++ +I  N+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH----ELSLDNWNKVIDTNL 125
Query: 129 RGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            GA LG + A K  V     G +I+ +SV  ++       Y  SK  +  +T+  A E  
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
             GIRVN I P  + T   +NA K  +    +              V  +  + G   K 
Sbjct: 186 PKGIRVNNIGPGAMNTP--INAEKFADPVQRAD-------------VESMIPM-GYIGKP 229
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++A  A +LAS ++ Y++G  L  DGG T
Sbjct: 230 EEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 22/270 (8%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           Y  L+ K+ ++TGG+ G+G A    F +  AKVV                          
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+ E+D+ NL+   I + G LD++ NNAGV      H    +   + ++ +I  N+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH----ELSLDNWNKVIDTNL 125
Query: 129 RGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            GA LG + A K  V     G +I+ +SV  ++       Y  SK  +  +T+  A E  
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
             GIRVN I P  + T   +NA K  +    +              V  +  + G   K 
Sbjct: 186 PKGIRVNNIGPGAMNTP--INAEKFADPVQRAD-------------VESMIPM-GYIGKP 229
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++A  A +LAS ++ Y++G  L  DGG T
Sbjct: 230 EEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 22/270 (8%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP-LVTY 68
           Y  L+ K+ ++TGG+ G+G A    F +  AKVV                          
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+ E+D+ NL+   I + G LD++ NNAGV      H    +   + ++ +I  N+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH----ELSLDNWNKVIDTNL 125
Query: 129 RGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            GA LG + A K  V     G +I+ +SV  ++       Y  SK  +  +T+  A E  
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
             GIRVN I P  + T   +NA K  +    +              V  +  + G   K 
Sbjct: 186 PKGIRVNNIGPGAMNTP--INAEKFADPVQRAD-------------VESMIPM-GYIGKP 229
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++A  A +LAS ++ Y++G  L  DGG T
Sbjct: 230 EEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 29/255 (11%)
Query: 32  VRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHG 91
           VR FV  GA+VV                    P   ++ CDV+ E D++ L++ TI + G
Sbjct: 26  VRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG 81
Query: 92  RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP--RRS-G 148
           RLD + NNAG   +    +   +  A  F  ++ +N+    LG     K+ +P  R+S G
Sbjct: 82  RLDCVVNNAG---HHPPPQRPEETSAQGFRQLLELNL----LGTYTLTKLALPYLRKSQG 134
Query: 149 CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVN 208
            +I+ +S+   +G      Y  +K A+  +TK  A +   YG+RVNCISP  + T +   
Sbjct: 135 NVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL--- 191
Query: 209 AWKSCEDCMDSGKPCXXXXXXXXXLVRG-LANLKGVTLKARDIAEAALYLASDESKYISG 267
            W+     M   +           +  G LA   G   +  ++  AA++LAS E+ + +G
Sbjct: 192 -WEELAALMPDPR---------ASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTG 240
Query: 268 HNLVVDGGFTTSKNC 282
             L+V GG      C
Sbjct: 241 IELLVTGGAELGYGC 255

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 120/273 (43%), Gaps = 38/273 (13%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           + L+ K+A++TGGA GIG A    F   GA +                       V  + 
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVK 60
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN---IIRIN 127
           CDVS   D++      IS  GR DIL NNAG+         +  FD   F+       IN
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY-------PLIPFDELTFEQWKKTFEIN 113
Query: 128 VRGAALGMKYAAKVMVP--RRSGC--IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           V    L     AK  VP  +R+G   II+  S    +       Y  +K A +G T+  A
Sbjct: 114 VDSGFL----MAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALA 169
Query: 184 CELGKYGIRVNCISPFGVATSML-VNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
            +LGK GI VN I+P  V T+    +A  +  D + +             +++ +  L+ 
Sbjct: 170 SDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPN-------------MLQAIPRLQ- 215
Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           V L   D+  AA +LASD++ +I+G  L VDGG
Sbjct: 216 VPL---DLTGAAAFLASDDASFITGQTLAVDGG 245

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK+A+VTGGA G+G   V+L +  GAKV                       V +   D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRH---D 60
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVL--GNQSKHKSITDFDANEFDNIIRINVRG 130
           VS E D   ++     + G L++L NNAG+L  G+    +        +F  +++IN   
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGR------LEDFSRLLKINTES 114
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA--CELGK 188
             +G +     M     G II+ ASV+S +       Y+ SK A+  LT+  A  C    
Sbjct: 115 VFIGCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173
Query: 189 YGIRVNCISPFGVATSMLVNAW-KSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
           Y IRVN I P G+ T M+  +  K     M    P                N  G     
Sbjct: 174 YAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKL--------------NRAGRAYMP 219
Query: 248 RDIAEAALYLASDESKYISGHNLVVD 273
             IA+  L+LASDES  +SG  L  D
Sbjct: 220 ERIAQLVLFLASDESSVMSGSELHAD 245

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 117/280 (41%), Gaps = 28/280 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH-- 70
           LEG++A +TG ARG G A        GA ++                     L   +   
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 71  -----------CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                       D      ++ +++  ++  GRLDI+  NAGV   Q+      D    +
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWD----DITPED 124
Query: 120 FDNIIRINVRGAA-LGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHAYTVSKHAIVG 177
           F +++ INV G     M  A +++   R G II  +S A + M     H YT SKHA+ G
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIH-YTASKHAVTG 183
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
           L +  A ELGK+ IRVN + P  V T M      S +     G+           L   L
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPM-----GSGDMVTAVGQAMETNPQLSHVLTPFL 238
Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            +      +  DIA+   +LASDES+ ++   + VD G T
Sbjct: 239 PDW---VAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 19/266 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK A++TG ARGIG A    +V+ GA+V                     P    +  D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVA---IADINLEAARATAAEIGPAACAIALD 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +  I   +   + + G +DIL NNA +         I +     +D +  INV G  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALF----DLAPIVEITRESYDRLFAINVSGTL 115
Query: 133 LGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             M+  A+ M+   R G II+ AS A   G      Y  +K A++ LT++    L ++GI
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175
Query: 192 RVNCISPFGVATSML--VNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            VN I+P  V       V+A  +  + +  G+              G A   G   +A D
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQV---------GAAVPFGRMGRAED 226
Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           +   A++LA+ E+ YI      VDGG
Sbjct: 227 LTGMAIFLATPEADYIVAQTYNVDGG 252

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 37/260 (14%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL--HCDVSLE 76
           +VTGG RGIG A  R F   G KV                     P   +L   CD++  
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGE-------------PPEGFLAVKCDITDT 71
Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           + ++         HG +++L  NAGV    +K + +      +F +++  N+ G    +K
Sbjct: 72  EQVEQAYKEIEETHGPVEVLIANAGV----TKDQLLMRMSEEDFTSVVETNLTGTFRVVK 127
Query: 137 YAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
            A + M+  + G ++  +SV  L+G  G   Y  SK  +VG  ++ A ELG   I  N +
Sbjct: 128 RANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVV 187
Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAALY 256
           +P  V T M           + S  P                   G   +  +IA    +
Sbjct: 188 APGFVDTDMTKVLTDEQRANIVSQVPL------------------GRYARPEEIAATVRF 229
Query: 257 LASDESKYISGHNLVVDGGF 276
           LASD++ YI+G  + VDGG 
Sbjct: 230 LASDDASYITGAVIPVDGGL 249

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 31/284 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXX-XXXXXXXXXXXXXXXXPLVTYLHC 71
           +EGK+A VTG ARG G +      + GA ++                     P       
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 72  D---------VSLEQDIQNL------INVTISKHGRLDILFNNAGVLGNQSKHKSITDFD 116
           D         V+ E D+++       ++  + + GRLDI+  NAG+ GN     ++    
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI-GNGGD--TLDKTS 125
Query: 117 ANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHA--YTVSKH 173
             ++  +I IN+ G    +K     M+   R G II T+SV  L     PH   Y  +KH
Sbjct: 126 EEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY--PHTGHYVAAKH 183
Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVN--AWKSCEDCMDSGKPCXXXXXXXX 231
            +VGL +    ELG++ IRVN + P  V T ML N   +K     +++  P         
Sbjct: 184 GVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGP-----DDMA 238
Query: 232 XLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            + +    L    ++  DI+ A L+ ASDE++YI+G  L +D G
Sbjct: 239 PICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 1   MNLNTEKKAYKT----LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXX 56
           ++L TE   +++    L  KIA++TG   GIG A  + FV  GA+V              
Sbjct: 11  VDLGTENLYFQSXTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI 70
Query: 57  XXXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD 116
                       +  D +   ++  L     ++ GR+D+LF NAG  G+      +T+  
Sbjct: 71  AEIGGG---AVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGG-GSXLPLGEVTE-- 124
Query: 117 ANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV 176
             ++D+    NV+G    ++ A  ++   R   ++ T S A   G      Y  SK A+ 
Sbjct: 125 -EQYDDTFDRNVKGVLFTVQKALPLLA--RGSSVVLTGSTAGSTGTPAFSVYAASKAALR 181
Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRG 236
              +N   +L   GIR+N +SP    T+ LV           +GK           L   
Sbjct: 182 SFARNWILDLKDRGIRINTLSPGPTETTGLVEL---------AGKDPVQQQGLLNALAAQ 232
Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           +    G   +A ++A AAL+LASD+S +++G  L VDGG
Sbjct: 233 VP--XGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG 269

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 113/269 (42%), Gaps = 21/269 (7%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH- 70
           TL+GK A+VTG   GIG    ++  + GA +V                      V  +H 
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHG----VKAVHH 56
Query: 71  -CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH-KSITDFDANEFDNIIRINV 128
             D+S    I+ L  +   + G +DIL NNAG+     +H   +  F    +D II +N+
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGI-----QHVAPVEQFPLESWDKIIALNL 111
Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
                G + A   M  R  G II+ ASV  L+G  G  AY  +KH +VGLTK    E   
Sbjct: 112 SAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETAT 171
Query: 189 YGIRVNCISPFGVATSMLVNAWKSCED-CMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
             +  N I P  V T ++    K  +D   + G P          L     +L  VT   
Sbjct: 172 SNVTCNAICPGWVLTPLVQ---KQIDDRAANGGDPL---QAQHDLLAEKQPSLAFVT--P 223
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
             + E  L+L S+    + G    VDGG+
Sbjct: 224 EHLGELVLFLCSEAGSQVRGAAWNVDGGW 252

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 21/263 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
            E K+ IVTG   GIG+A      + GA VV                         +  D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  +  + + + T+++ G +D L NNA + G   K   +   D   +   + +N+ GA 
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGM-KLDFLLTIDPEYYKKFMSVNLDGAL 125
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +   K M  R  G I++ +S A+    L  + Y ++K  I GLT+  + ELG   IR
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIR 182
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           +N I+P  + T    N   + ++ +D              +V+GL   +  T    D+  
Sbjct: 183 INAIAPGPIDTE--ANRTTTPKEMVDD-------------IVKGLPLSRMGT--PDDLVG 225
Query: 253 AALYLASDESKYISGHNLVVDGG 275
             L+L SDE+ +I+G    VDGG
Sbjct: 226 MCLFLLSDEASWITGQIFNVDGG 248

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 25/264 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+ A+VTG   GIGEA  R F   GA V                       V     +
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIV---GLHGTREDKLKEIAADLGKDVFVFSAN 81
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S  + I+ L  V   +   +DIL NNAG+    ++          ++D+++ +N+  A+
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVNNAGI----TRDGLFVRMQDQDWDDVLAVNLTAAS 137
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M+ RR G II+  S+  ++G  G   Y  +K  ++G +K  A E+    I 
Sbjct: 138 TLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNIT 197
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VNCI+P  + ++M     +  ++ + +  P                   G+     +IA 
Sbjct: 198 VNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRM---------------GI---GEEIAF 239
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
           A +YLASDE+ Y++G  L ++GG 
Sbjct: 240 ATVYLASDEAAYLTGQTLHINGGM 263

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 27/281 (9%)
Query: 1   MNLNTEKKAYKT----LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXX 55
           ++L TE   +++      GK  ++TG ++GIG    +     G KV +            
Sbjct: 11  VDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADAL 70
Query: 56  XXXXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDF 115
                        +  D + E D    I   +   G L  L NNAGV+ ++   K  T+ 
Sbjct: 71  KNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTE- 129
Query: 116 DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI 175
              +F ++I  N+  A +G + A KVM   R G +++ AS+    G +G   Y+ SK  +
Sbjct: 130 ---DFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGM 186
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVR 235
           + ++K+ A E     IR N ++P  + T M  N     +       P             
Sbjct: 187 IAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPL------------ 234
Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
              N  G    A+++AEA  +L SD S YI+G  L V+GG 
Sbjct: 235 ---NRLG---SAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 19/266 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+ AIVTGG++GIG A  R   K GA V                       V     D
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVD 66
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +   +   I   G  D+L  NAGV    S  +   D    E+D    +N RG  
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGV----STMRPAVDITDEEWDFNFDVNARGVF 122
Query: 133 LGMKYAAK-VMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  + A +  +     G I++TAS+A+ +G      Y+ SK A+ G T+  A E+    I
Sbjct: 123 LANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 192 RVNCISPFGVATSMLVNA--WKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           RVNC+ P  V T+M      W++    M + +           L        G   +  D
Sbjct: 183 RVNCVCPGFVKTAMQEREIIWEAELRGM-TPEAVRAEYVSLTPL--------GRIEEPED 233
Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           +A+  ++LASD +++++G  + V GG
Sbjct: 234 VADVVVFLASDAARFMTGQGINVTGG 259

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+ ++AIVTGGA+ IG A V    + GA+V+                      V+ +  D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+  + +QN +     + GR+DIL   AG+  ++ K + +TD    ++   + IN+ G  
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTD---GQWLKQVDINLNGMF 127
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYG 190
              +   ++M+ ++ G I++  S++ L+        AY  SK  +    ++ A E   +G
Sbjct: 128 RSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHG 187
Query: 191 IRVNCISP---------FGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK 241
           IR N ++P         FG+    L +AW +       G+P                   
Sbjct: 188 IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQP------------------- 228
Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                  ++A    +LASD +  ++G  + VD GFT
Sbjct: 229 ------DEVASVVQFLASDAASLMTGAIVNVDAGFT 258

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXX-XXXXXXXXXPLVT-YLHCD 72
           GK+A+VTG A+GIG A     +  GAKV                      P  T ++ CD
Sbjct: 7   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 66
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +Q +++     +   GRLDIL NNAGV   ++  K++         N++ + + G  
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQ-------INLVSV-ISGTY 118
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT--ACELGKYG 190
           LG+ Y +K       G II+ +S+A LM       Y  SKH IVG T++   A  L   G
Sbjct: 119 LGLDYMSK-QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 177
Query: 191 IRVNCISPFGVATSML 206
           +R+N I P  V T++L
Sbjct: 178 VRLNAICPGFVNTAIL 193

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 110/264 (41%), Gaps = 22/264 (8%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +L  K+A+VTG +RGIG          GA VV                         L  
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVL 61
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           ++S  + IQN      +++  +DIL NNAG+  +    +   D    E+ ++I  N+   
Sbjct: 62  NISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSED----EWQSVINTNLSSI 117
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               K   +    +R G IIS  SV    G  G   Y  +K  ++G +K+ A E+    I
Sbjct: 118 FRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNI 177
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
            VN ++P  +AT          +  + +  P                   G   + +DIA
Sbjct: 178 TVNVVAPGFIATDXTDKLTDEQKSFIATKIPS------------------GQIGEPKDIA 219
Query: 252 EAALYLASDESKYISGHNLVVDGG 275
            A  +LAS+E+KYI+G  L V+GG
Sbjct: 220 AAVAFLASEEAKYITGQTLHVNGG 243

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXX---XXXXXXPLVTYL 69
              K  I+TG + GIG  T  LF + GA V                          V  +
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+ E     +IN T+ + G++D+L NNAG     +   + TD   + +   +++N++
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA------YTVSKHAIVGLTKNTA 183
            A + M    K  +    G I++ +S+ +     GP A      Y ++K A+   T++TA
Sbjct: 124 -AVIEMTKKVKPHLVASKGEIVNVSSIVA-----GPQAQPDFLYYAIAKAALDQYTRSTA 177
Query: 184 CELGKYGIRVNCISP------FGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
            +L K+GIRVN +SP      F  A  M   A +   + M S K C              
Sbjct: 178 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI----------- 226
Query: 238 ANLKGVTLKARDIAEAALYLAS-DESKYISGHNLVVDGG 275
               G   K   IA   L+LA  + S YI G ++V DGG
Sbjct: 227 ----GAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 261

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 40/267 (14%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQD 78
           +VTGG++GIG+A V L +++    V                      + ++  D++ +QD
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN---------LKFIKADLTKQQD 58
Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV-------RGA 131
           I N++++   K+   D +F NAG+L       SI D D      ++ +NV       +G 
Sbjct: 59  ITNVLDII--KNVSFDGIFLNAGIL----IKGSIFDIDIESIKKVLDLNVWSSIYFIKGL 112
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +K  A ++      C I+  +           AYT+SK AI   TK+ A +L KY I
Sbjct: 113 ENNLKVGASIVFNGSDQCFIAKPN---------SFAYTLSKGAIAQXTKSLALDLAKYQI 163
Query: 192 RVNCISPFGVATSMLVN-AWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           RVN + P  V T +  N   K   +   S             L R          + ++I
Sbjct: 164 RVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNR--------IAQPQEI 215
Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           AE  ++L SD+SK+ +G  + +DGG+T
Sbjct: 216 AELVIFLLSDKSKFXTGGLIPIDGGYT 242

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 42/265 (15%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
            EGKIA+VTG +RGIG A        GAKV+                         L  +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK---GLMLN 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    I++++    ++ G +DIL NNAG+    ++   +      E+++II  N+    
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGI----TRDNLLMRMKDEEWNDIIETNLSSVF 115
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K   + M+ +R G II+           G   Y  +K  ++G +K+ A E+   GI 
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGIT 166
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL-KARDIA 251
           VN ++P  + TS          D   +G                LA +    L  A++IA
Sbjct: 167 VNVVAPGFIETS----------DDQRAGI---------------LAQVPAGRLGGAQEIA 201
Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
            A  +LASDE+ YI+G  L V+GG 
Sbjct: 202 NAVAFLASDEAAYITGETLHVNGGM 226

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +L+ K+ ++TG   G+G+   + F K+GAKVV                            
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPD--QH 376
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+  +D + +I   I K+G +DIL NNAG+L    + +S       E+D++ ++++ G 
Sbjct: 377 DVA--KDSEAIIKNVIDKYGTIDILVNNAGIL----RDRSFAKMSKQEWDSVQQVHLIGT 430
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + A    V ++ G II+  S + + G  G   Y+ SK  I+GL+K  A E  K  I
Sbjct: 431 FNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNI 490
Query: 192 RVNCISP 198
           +VN ++P
Sbjct: 491 KVNIVAP 497

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +LEGK+A++TG   G GE   + F K GAKVV                      V     
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA---A 62
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+S E D+   +   +SK G++DIL NNAG+ G++ ++  +   +  EFD I+ +NVRG 
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELV--EPEEFDRIVGVNVRGV 119
Query: 132 ALGMKYAAKVMVP-------RRSGCIISTASVASLMGGLGPHA----YTVSKHAIVGLTK 180
            L        ++P       +   C+I   +VAS   G  P      Y  +K  +V +TK
Sbjct: 120 YL----MTSKLIPHFKENGAKGQECVI--LNVASTGAGR-PRPNLAWYNATKGWVVSVTK 172
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANL 240
             A EL    IRV  ++P    T +L       ED  +  K                   
Sbjct: 173 ALAIELAPAKIRVVALNPVAGETPLLTTFM--GEDSEEIRKKFRDSIPM----------- 219
Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            G  LK  D+AEAA +L S ++  I+G  L VDGG
Sbjct: 220 -GRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG 253

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 115/281 (40%), Gaps = 33/281 (11%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +L+G++A +TG ARG G +        GA ++                     L      
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 72  -------------DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                        DV  +  ++ L+   + + GRLD++  NAGVL +  +   +TD    
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTD---E 127
Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
           ++D +I +N+ G    ++     M+     G I+  +S A L    G   Y+ SKH +  
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTA 187
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
           LT   A ELG+YGIRVN I P+ V T M+       E  M+               V   
Sbjct: 188 LTNTLAIELGEYGIRVNSIHPYSVETPMI-----EPEAMME-------IFARHPSFVHSF 235
Query: 238 ANLKGVT---LKARDIAEAALYLASDESKYISGHNLVVDGG 275
             +       + A ++A+   +LA D S  ++G  + VD G
Sbjct: 236 PPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 24/274 (8%)
Query: 6   EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL 65
           E+    +L+ K  +VTGG +GIG A V  F   GA +                       
Sbjct: 5   EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64
Query: 66  VTYLHCDVSLEQDIQNLINVTISKHG-RLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
           VT   CD SL  + + L+    S  G +LDIL NN G +    + K   D+ A +F   I
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI----RSKPTLDYTAEDFSFHI 120
Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             N+  A    + A  ++     G II  +S+A ++       Y+ +K A+  L +N AC
Sbjct: 121 STNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLAC 180
Query: 185 ELGKYGIRVNCISPFGVATSMLVNAW-KSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGV 243
           E    GIR N ++P  +AT +    +    +  + S KP                   G 
Sbjct: 181 EWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL------------------GR 222
Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             +  +++    +L    + YI+G  + VDGG T
Sbjct: 223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 256

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A ++++G +A++TGGA G+G +T +  V  GA  V                        +
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGN---CIF 60
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANE-FDNIIRI 126
              +V+ E+++Q  + +   K GR+D+  N AG+ +  ++ H+        E F  +I +
Sbjct: 61  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 127 NVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++  A VM         + G II+TASVA+  G +G  AY+ SK  IVG+T 
Sbjct: 121 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A +L   GIRV  I+P   AT +L     +  + + S  P
Sbjct: 181 PIARDLAPIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQVP 222

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 3   LNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXX 62
           ++ + K   +L G++A+VTG +RGIG A  R     GA+VV                   
Sbjct: 17  IDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA 76
Query: 63  XPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEF 120
                   CD+S    I       ++ HGR D+L NNAGV   G       +      E+
Sbjct: 77  GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGG-----PLHTMKPAEW 131
Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           D +I +N++   L ++  A  M+  + G II+ +S+A         AYT SK  + GL  
Sbjct: 132 DALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMT 191
Query: 181 NTACELGKYGIRVNCISPFGVATSM 205
           + A EL ++ +RV+ ++P  V T  
Sbjct: 192 SAAEELRQHQVRVSLVAPGSVRTEF 216

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+ A+VTG   G+GEA  R     GA V                       +     +
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIV---GLHGTREEKLKELAAELGERIFVFPAN 61
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S  + ++ L      + G +DIL NNAG+    ++          ++D ++ +N+    
Sbjct: 62  LSDREAVKALGQKAEEEMGGVDILVNNAGI----TRDGLFVRMSDEDWDAVLTVNLTSVF 117
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M+ RR+G II+  S+  + G  G   Y  SK  ++G +K+ A E+    + 
Sbjct: 118 NLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVT 177
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VNCI+P  + ++M     +  +D +    P                 +K + + A DIA 
Sbjct: 178 VNCIAPGFIESAMTGKLNEKQKDAIMGNIP-----------------MKRMGVGA-DIAA 219
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
           A +YLASDE+ Y++G  L V+GG 
Sbjct: 220 AVVYLASDEAAYVTGQTLHVNGGM 243

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+ A+VTG   G+GEA  R     GA V                       +     +
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIV---GLHGTREEKLKELAAELGERIFVFPAN 64
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S  + ++ L      + G +DIL NNAG+    ++          ++D ++ +N+    
Sbjct: 65  LSDREAVKALGQKAEEEMGGVDILVNNAGI----TRDGLFVRMSDEDWDAVLTVNLTSVF 120
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +     M+ RR+G II+  S+  + G  G   Y  SK  ++G +K+ A E+    + 
Sbjct: 121 NLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVT 180
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VNCI+P  + ++M     +  +D +    P                 +K + + A DIA 
Sbjct: 181 VNCIAPGFIESAMTGKLNEKQKDAIMGNIP-----------------MKRMGVGA-DIAA 222
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
           A +YLASDE+ Y++G  L V+GG 
Sbjct: 223 AVVYLASDEAAYVTGQTLHVNGGM 246

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 11/222 (4%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A ++++G +A++TGGA G+G +T +  V  GA  V                        +
Sbjct: 3   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGN---CIF 59
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANE-FDNIIRI 126
              +V+ E+++Q  + +   K GR+D+  N AG+ +  ++ H+        E F  +I +
Sbjct: 60  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 119
Query: 127 NVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++  A VM         + G II+TASVA+  G +G  AY+ SK  IVG+T 
Sbjct: 120 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 179
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A +L   GIRV  I+P   AT +L        + + S  P
Sbjct: 180 PIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVP 221

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 114/271 (42%), Gaps = 34/271 (12%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
             GK   VTG  +GIG AT   FV+ GAKV                     P  T +  D
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY---------PFATEV-MD 54
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +  +    +++  RLD L N AG+L    +  +       ++     +NV GA 
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGIL----RMGATDQLSKEDWQQTFAVNVGGAF 110
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +        +R G I++ AS A+    +G  AY  SK A+  L  +   EL   G+R
Sbjct: 111 NLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVR 170
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA-NLK-GVTL----K 246
            N +SP    T M    W S +D  +               +RG     K G+ L    +
Sbjct: 171 CNVVSPGSTDTDMQRTLWVS-DDAEEQ-------------RIRGFGEQFKLGIPLGKIAR 216
Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++IA   L+LASD + +I+  ++VVDGG T
Sbjct: 217 PQEIANTILFLASDLASHITLQDIVVDGGST 247

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 11/222 (4%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A ++++G +A++TGGA G+G +T +  V  GA  V                        +
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGN---CIF 60
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANE-FDNIIRI 126
              +V+ E+++Q  + +   K GR+D+  N AG+ +  ++ H+        E F  +I +
Sbjct: 61  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 127 NVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++  A VM         + G II+TASVA+  G +G  AY+ SK  IVG+T 
Sbjct: 121 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A +L   GIRV  I+P   AT +L        + + S  P
Sbjct: 181 PIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVP 222

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 24/262 (9%)
Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVX--XXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           A++TG +RGIG A      + G  +                       PLV  L  ++  
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
            +    L++      G LD L NNAG+    ++   +      +++ ++  N+       
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGI----TRDTLLVRMKDEDWEAVLEANLSAVFRTT 119
Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           + A K+M+  R G I++  SV  ++G  G   Y  SK  ++G T+  A E  + GI VN 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAAL 255
           ++P  + T M     +  ++      P                   G   +  ++AEA  
Sbjct: 180 VAPGFIETEMTERLPQEVKEAYLKQIPA------------------GRFGRPEEVAEAVA 221
Query: 256 YLASDESKYISGHNLVVDGGFT 277
           +L S+++ YI+G  L VDGG T
Sbjct: 222 FLVSEKAGYITGQTLCVDGGLT 243

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           K+A+VTG  +GIG+A     VK G  V                          +  DVS 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
              +   +       G  D++ NNAGV    +    I        D +  INV+G   G+
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGV----APSTPIESITPEIVDKVYNINVKGVIWGI 118
Query: 136 KYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           + A +        G II+  S A  +G      Y+ SK A+ GLT+  A +L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANL-KGVTL----KARD 249
              P  V T M     +   +   +GKP          L  G A   K +TL    +  D
Sbjct: 179 GYCPGIVKTPMWAEIDRQVSEA--AGKP----------LGYGTAEFAKRITLGRLSEPED 226
Query: 250 IAEAALYLASDESKYISGHNLVVDGGF 276
           +A    YLAS +S Y++G +L++DGG 
Sbjct: 227 VAACVSYLASPDSDYMTGQSLLIDGGM 253

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 113/266 (42%), Gaps = 15/266 (5%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K LEGK A++TG ARGIG A    +V+ GA V                     P    + 
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVA---IADIDIERARQAAAEIGPAAYAVQ 60
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+ +  I   I  T+   G LDIL NNA +         I +     ++ +  INV G
Sbjct: 61  XDVTRQDSIDAAIAATVEHAGGLDILVNNAALF----DLAPIVEITRESYEKLFAINVAG 116
Query: 131 AALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               ++ AA+  + + R G II+ AS A   G      Y  +K A++ LT++   +L K+
Sbjct: 117 TLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            I VN I+P GV        W   +      +           LV G A   G    A D
Sbjct: 177 RINVNAIAP-GVVDG---EHWDGVDALF--ARYENRPRGEKKRLV-GEAVPFGRXGTAED 229
Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           +   A++LAS ES YI      VDGG
Sbjct: 230 LTGXAIFLASAESDYIVSQTYNVDGG 255

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 32/287 (11%)
Query: 1   MNLNTEKKAYKT------LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXX 54
           ++L TE   +++      L G+ A+VTG   GIG A    + + GA V+           
Sbjct: 11  VDLGTENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEV 70
Query: 55  XXXXXXXXXPLVTYLHCDVSLEQDIQNLINVT--ISKHGRLDILFNNAGVLGNQSKHKSI 112
                         +  D++   D++   NV   ++   R+D+L NNAG++         
Sbjct: 71  ADEIADGGGSAEAVV-ADLA---DLEGAANVAEELAATRRVDVLVNNAGIIARAPAE--- 123
Query: 113 TDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK 172
            +     +  ++ +N+  A +  +     M+   SG I++ AS+ S  GG    AY  SK
Sbjct: 124 -EVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASK 182
Query: 173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXX 232
           HA+VGLT+  A E    G+ VN ++P  V T+       +     D  +           
Sbjct: 183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTA------NTAALRADDERAAEITARIP-- 234
Query: 233 LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
                    G      D+   A++LASD + Y+ G  L VDGG+  S
Sbjct: 235 --------AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLAS 273

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A ++++G +A++TGGA G+G AT    V  GA  V                        +
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN---CVF 60
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH--KSITDFDANEFDNIIRI 126
              DV+ E+D+Q  + +   K GR+D+  N AG+      +  K        +F  ++ +
Sbjct: 61  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 127 NVRGAALGMKYAAKVM---VPRRSG---CIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++  A  M    P + G    II+TASVA+  G +G  AY+ SK  IVG+T 
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A +L   GIRV  I+P    T +L +  +   + + S  P
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVP 222

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 120/278 (43%), Gaps = 19/278 (6%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXX 60
           MN N E +   +L+G  A+VTGG++GIG A V      GA+V                  
Sbjct: 9   MNCNNEGRW--SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR 66
Query: 61  XXXPLVTYLHCDVSLEQDIQNLIN-VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                V    CD+    +   L+  V     G+L+IL NNAGV+     HK   DF   +
Sbjct: 67  EKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV----IHKEAKDFTEKD 122
Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
           ++ I+  N   A    + A  ++   ++G +I  +S+A          Y+ SK AI  +T
Sbjct: 123 YNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMT 182
Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLAN 239
           K+ ACE  K  IRVN ++P  + T ++  A K         K           +V+    
Sbjct: 183 KSLACEWAKDNIRVNSVAPGVILTPLVETAIK---------KNPHQKEEIDNFIVKTPMG 233
Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             G   K ++++    +L    + YI+G  +  DGGFT
Sbjct: 234 RAG---KPQEVSALIAFLCFPAASYITGQIIWADGGFT 268

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 38/273 (13%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+ A+VTG +RG+G A        GA+++                         +  D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E +I         +   +DIL NNAG+       K + + +  ++  +I  N+  A 
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGI----QFRKPMIELETADWQRVIDTNLTSAF 139
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +  + AAK M+PR  G I++  S+ S +       YTV+K  I  LT+  A E  +YGI+
Sbjct: 140 MIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQ 199
Query: 193 VNCISPFGVATSM--------LVNAW-KSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGV 243
            N I P  + T M          +AW K+       GKP                     
Sbjct: 200 ANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKP--------------------- 238
Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
               +++   A++L++  S Y++G  + VDGG 
Sbjct: 239 ----QELVGTAVFLSASASDYVNGQIIYVDGGM 267

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  D+S   ++  L +  +S  G LD + +N+G+     + +   +     FD +  +N 
Sbjct: 76  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQEL----FDKVFNLNT 131
Query: 129 RG----AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTA 183
           RG    A  G+K+       RR G II T+S+A++M G+  HA Y  SK A+ G  +  A
Sbjct: 132 RGQFFVAQQGLKHC------RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFA 185
Query: 184 CELGKYGIRVNCISPFGVATSML-VNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLAN--- 239
            + G  G+ VNCI+P GV T M   N+W           P          +  GLAN   
Sbjct: 186 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYA--------PGGYKGMPQEKIDEGLANMNP 237
Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           LK +   A DI  A   L  +ES++I+G  + + GG
Sbjct: 238 LKRIGYPA-DIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK AI+TG   GIG+     F   GA VV                           CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ EQ++  L +  ISK G++DIL NNAG  G +     + D     F     +NV    
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD-----FRRAYELNVFSFF 123
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +  A  M     G I++  S+A+    +   +Y  SK A   L +N A +LG+  IR
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VN I+P     ++L +A KS         P           +R L        + +DIA 
Sbjct: 184 VNGIAP----GAILTDALKSVI------TPEIEQKMLQHTPIRRLG-------QPQDIAN 226
Query: 253 AALYLASDESKYISGHNLVVDGG 275
           AAL+L S  + ++SG  L V GG
Sbjct: 227 AALFLCSPAASWVSGQILTVSGG 249

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC- 71
           ++G++ IVTG   GIG A    F   GA+VV                     +V  +   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 72  ---------DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
                    +V+       LI   +   G LD+L NNAG++    + + I +    EFD 
Sbjct: 85  GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV----RDRMIANTSEEEFDA 140
Query: 123 IIRINVRGAALGMKYAAKVMVPRR------SGCIISTASVASLMGGLGPHAYTVSKHAIV 176
           +I ++++G    M++AA              G II+T+S A L G +G   Y+ +K  I 
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIA 200
Query: 177 GLTKNTACELGKYGIRVNCISP 198
            LT   A E+G+YG+ VN I+P
Sbjct: 201 TLTLVGAAEMGRYGVTVNAIAP 222

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A ++++G +A++TGGA G+G AT    V  GA  V                        +
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN---CVF 60
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH--KSITDFDANEFDNIIRI 126
              DV+ E+D+Q  + +   K GR+D+  N AG+      +  K        +F  ++ +
Sbjct: 61  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 127 NVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++  A  M         + G II+TASVA+  G +G  AY+ SK  IVG+T 
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A +L   GIRV  I+P    T +L +  +   + + S  P
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVP 222

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A ++++G +A++TGGA G+G AT    V  GA  V                        +
Sbjct: 6   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN---CVF 62
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH--KSITDFDANEFDNIIRI 126
              DV+ E+D+Q  + +   K GR+D+  N AG+      +  K        +F  ++ +
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 127 NVRGAALGMKYAAKVM---VPRRSG---CIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++  A  M    P + G    II+TASVA+  G +G  AY+ SK  IVG+T 
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 182
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A +L   GIRV  I+P    T +L +  +   + + S  P
Sbjct: 183 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVP 224

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G++A++TGGA G+G A V  FV  GA+V                       V     D
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVV---GD 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD--FDANEFDNIIRINVRG 130
           V   QD +      ++  G++D L  NAG+    +    + +   DA  FD+I  +NV+G
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDA-AFDDIFHVNVKG 118
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               +K     +V  R   + + ++      G GP  YT +KHA+VGL +  A EL  + 
Sbjct: 119 YIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGP-LYTATKHAVVGLVRQMAFELAPH- 176
Query: 191 IRVNCISPFGVATSM 205
           +RVN ++P G+ T +
Sbjct: 177 VRVNGVAPGGMNTDL 191

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 111/265 (41%), Gaps = 25/265 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK A+VTG A+GIG+A        GA V+                      +     D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIA---AD 60
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S    ++ L     +  G +DIL NNA ++       +  D D + +  II +N+ G  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV----PFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 133 LGMKYAAKVM-VPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           +  +     M    ++G +IS AS     G     AY  +K  ++G T+  A ELGKY I
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
             N ++P G+  S  V A    E                   V  L  +KG   +   IA
Sbjct: 177 TANAVTP-GLIESDGVKASPHNE---------------AFGFVEMLQAMKG-KGQPEHIA 219
Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
           +   +LASD++++I+G  L VD G 
Sbjct: 220 DVVSFLASDDARWITGQTLNVDAGM 244

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 8   KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-V 66
           K  + L+GK  ++TGG  GIG A    F K GA +                      +  
Sbjct: 40  KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKC 99
Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             L  D+S EQ  ++++  T+ + G L+IL NN   +  Q   + +    A + +   RI
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN---VAQQYPQQGLEYITAEQLEKTFRI 156
Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           N+       K A   +  ++   II+TAS+ +  G      Y+ +K AIV  T++ +  L
Sbjct: 157 NIFSYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214
Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCE-DCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
            + GIRVN ++P  + T ++ +++   +     S  P                       
Sbjct: 215 VQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPG------------------ 256
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
           +  ++A A +YLAS +S Y++G  + V+GG
Sbjct: 257 QPYELAPAYVYLASSDSSYVTGQXIHVNGG 286

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 39/281 (13%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPL--VTYL 69
             GK  I+TG + GIG +   +F K GA+V +                    P   +  +
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+      ++IN T++K G++DIL NNAG   N +   + TD     +    ++N +
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAG--ANLADGTANTDQPVELYQKTFKLNFQ 141
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA------YTVSKHAIVGLTKNTA 183
            A + M    K  + +  G I++ +S+ +     GP A      Y  +K A+   T+ TA
Sbjct: 142 -AVIEMTQKTKEHLIKTKGEIVNVSSIVA-----GPQAHSGYPYYACAKAALDQYTRCTA 195
Query: 184 CELGKYGIRVNCISPFGVATSML------VNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
            +L ++G+RVN +SP  VAT  +        A       + S K C              
Sbjct: 196 IDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV----------- 244
Query: 238 ANLKGVTLKARDIAEAALYLAS-DESKYISGHNLVVDGGFT 277
               G   K  +IA   ++LA  + S YI G ++V DGG T
Sbjct: 245 ----GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 281

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 37/279 (13%)
Query: 1   MNLNTEKK---AYKTLEGKIAIVTGGA-RGIGEATVRLFVKHGAKVVXXXXXXXXXXXXX 56
           MNL+   K    +  L+GK+ +VT  A  GIG  T R  +  GA VV             
Sbjct: 5   MNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR 64
Query: 57  XXXXXX-XPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDF 115
                     V  + CDV+  + +  LI  T+ K GRLD+L NNAG LG Q+    +TD 
Sbjct: 65  DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG-LGGQTPVVDMTD- 122
Query: 116 DANEFDNIIRINV----RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS 171
              E+D ++ + +    R     ++Y   V      G I++ ASV           Y  +
Sbjct: 123 --EEWDRVLNVTLTSVMRATRAALRYFRGV---DHGGVIVNNASVLGWRAQHSQSHYAAA 177
Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXX 231
           K  ++ LT+ +A E  ++G+R+N +SP  +A    +    S E                 
Sbjct: 178 KAGVMALTRCSAIEAVEFGVRINAVSP-SIARHKFLEKTSSSE----------------- 219
Query: 232 XLVRGLANLK--GVTLKARDIAEAALYLASDESKYISGH 268
            L+  LA+ +  G   +  ++A    +LASD S Y++G 
Sbjct: 220 -LLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGE 257

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 113/264 (42%), Gaps = 24/264 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L   +AIVTG A GIG A    F K GA VV                         L C+
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ EQ  + +I   + + G++ +L NNAG  G +     ++DF+        ++N+    
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEW-----AFKLNLFSLF 124
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              + AA  M     G I++ +S+A     +   +Y  SK A+  LT+N A ++G  GIR
Sbjct: 125 RLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIR 184
Query: 193 VNCISPFGVATSMLVNAW-KSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
           VN I+P  + T  L        E  M    P                   G   +A+DIA
Sbjct: 185 VNAIAPGAIKTDALATVLTPEIERAMLKHTPL------------------GRLGEAQDIA 226
Query: 252 EAALYLASDESKYISGHNLVVDGG 275
            AAL+L S  + +ISG  L V GG
Sbjct: 227 NAALFLCSPAAAWISGQVLTVSGG 250

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 8   KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-V 66
           K  + L+GK  ++TGG  GIG A    F K GA +                      +  
Sbjct: 40  KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKC 99
Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             L  D+S EQ  ++++  T+ + G L+IL NN   +  Q   + +    A + +   RI
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN---VAQQYPQQGLEYITAEQLEKTFRI 156
Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           N+       K A   +  ++   II+TAS+ +  G      Y+ +K AIV  T++ +  L
Sbjct: 157 NIFSYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214
Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCE-DCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
            + GIRVN ++P  + T ++ +++   +     S  P                       
Sbjct: 215 VQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPG------------------ 256
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
           +  ++A A +YLAS +S Y++G  + V+GG
Sbjct: 257 QPYELAPAYVYLASSDSSYVTGQMIHVNGG 286

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 26/282 (9%)
Query: 1   MNLNTEKKAYKT--LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXX 58
           ++L TE   +++  L+GK+A+VTG +RGIG+A      + GA V+               
Sbjct: 11  VDLGTENLYFQSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAET 70
Query: 59  XXXXXPLVTYLHCDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDA 117
                     L  DVS ++ +   +   I +H G+  I+ NNAG+    ++   +     
Sbjct: 71  LKANGVEGAGLVLDVSSDESVAATLE-HIQQHLGQPLIVVNNAGI----TRDNLLVRMKD 125
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
           +E+ +++  N+       K   + M   R G II+  SV   MG  G   Y  +K  + G
Sbjct: 126 DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEG 185
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
            T+  A E+G   I VN ++P  + T M     ++  + +    P               
Sbjct: 186 FTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPL-------------- 231
Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
               G   +A +IA+   +LASD + Y++G  + V+GG   S
Sbjct: 232 ----GRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS 269

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQ 77
           A+VTGG+RGIG A     V  G +V                     PL T L  D     
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV----PLPTDLEKD----- 55
Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
           D + L+   +   G L +L + A V    +  K   +    E+  ++ +++  A L  + 
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAV----NVRKPALELSYEEWRRVLYLHLDVAFLLAQA 111
Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGP---HAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           AA  M     G ++   SV +   G GP    AYT +K A++GLT+  A E  + GIRVN
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAG-GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN 170
Query: 195 CISPFGVATSMLVNAWKSCE--DCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
            + P  V T   +   ++ E  + + +  P                   G   +  +IA 
Sbjct: 171 LLCPGYVETEFTLPLRQNPELYEPITARIPM------------------GRWARPEEIAR 212
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
            A  L  DE++Y++G  + VDGGF
Sbjct: 213 VAAVLCGDEAEYLTGQAVAVDGGF 236

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 89/189 (47%), Gaps = 23/189 (12%)
Query: 91  GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGC 149
           G LD+L NNAG+    S  + + D D   FD  I +N+R  AL      K MV     G 
Sbjct: 97  GGLDVLVNNAGI----SHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGA 152
Query: 150 IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA 209
           II+ AS A+L      +AY  SK  +V  TK  A ELG +GIR N + P  V T M    
Sbjct: 153 IITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV 212
Query: 210 WKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK-GVTLKARDIAEAALYLASDESKYISGH 268
           W       D  K               +A +  G      ++++A ++LASD +  I+G 
Sbjct: 213 WG------DEAKSAPM-----------IARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255
Query: 269 NLVVDGGFT 277
           ++ VDGG+T
Sbjct: 256 DIPVDGGYT 264

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 25/280 (8%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVXXXXXXXXXXXXXXXX 59
           ++L TE   +++   K+ ++TGG+RGIG A+  L  + G A  V                
Sbjct: 11  VDLGTENLYFQSXLSKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQI 70
Query: 60  XXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                    +  DV+ E+++        ++ GRL  L NNAGV+   ++   IT      
Sbjct: 71  REAGGQALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGIT---LER 127
Query: 120 FDNIIRINVRGAALGMKYAAKVMVPR---RSGCIISTASVASLMGGLGPHA-YTVSKHAI 175
                 INV G+ L  + A K    R     G I++ +S A+ +G  G +  Y  +K AI
Sbjct: 128 LQRXFEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAI 187
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVR 235
              T   A E+   GIRVN + P  + T           D   SG            +  
Sbjct: 188 DTFTLGLAKEVATEGIRVNAVRPGIIET-----------DIHASGGLPNRARDVAPQVPX 236
Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             A        AR++AEA ++L  D++ Y +G  L V GG
Sbjct: 237 QRAG------TAREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY-LHC 71
           L+GK+++VTG  RGIG A        G+ V+                     +  + +  
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           ++  E+ I        +    +DIL NNAG+    ++ K        +++ ++++N+ G 
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGI----TRDKLFLRMSLLDWEEVLKVNLTGT 120
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L  + + + M+ +R G I++ +SV    G +G   Y+ +K  ++G TK+ A EL    +
Sbjct: 121 FLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNV 180
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
            VN ++P  + T M     +  +       P                   G      ++A
Sbjct: 181 LVNAVAPGFIETDMTAVLSEEIKQKYKEQIPL------------------GRFGSPEEVA 222
Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
              L+L S+ + YI+G  + V+GG 
Sbjct: 223 NVVLFLCSELASYITGEVIHVNGGM 247

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           +LEGK+A+VTG  RGIG        + G KV V                         + 
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            +V + +DI  +    +   G+LDI+ +N+GV+        + D    EFD +  IN RG
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV----SFGHVKDVTPEEFDRVFTINTRG 141
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTACELGKY 189
                + A K +     G +I   S+      +  HA Y+ SK AI    +  A ++   
Sbjct: 142 QFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK 199
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            I VN ++P G+ T M       C + + +G+            V+  + L+ V L   D
Sbjct: 200 KITVNVVAPGGIKTDMY---HAVCREYIPNGENLSNEEVDEYAAVQ-WSPLRRVGLPI-D 254
Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           IA    +LAS++  +++G  + +DGG
Sbjct: 255 IARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 48/270 (17%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K L+GK+AIVTG ARGIG     +F + GA VV                       T L 
Sbjct: 230 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGG---TALW 286
Query: 71  CDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            DV+ +  +  +       H G+ DIL NNAG+    ++ K + + D   +D ++ +N+ 
Sbjct: 287 LDVTADDAVDKISEHLRDHHGGKADILVNNAGI----TRDKLLANMDDARWDAVLAVNL- 341
Query: 130 GAALGMKYAAKVMVPRRS----GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
              L      + +V   S    G +I  +S+A + G  G   Y  +K  ++G+T+  A  
Sbjct: 342 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 398
Query: 186 LGKYGIRVNCISPFGVATSMLV-------NAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           L   GI +N ++P  + T M            +     +  G+P                
Sbjct: 399 LAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPV--------------- 443
Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGH 268
                     D+AEA  Y AS  S  ++G+
Sbjct: 444 ----------DVAEAIAYFASPASNAVTGN 463

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 118/293 (40%), Gaps = 43/293 (14%)
Query: 1   MNLNTEKKAYKTLEGK---IAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXX 57
           ++L TE   +++   +   +A++TG   GIG AT       G  V               
Sbjct: 11  VDLGTENLYFQSXXNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVAD 70
Query: 58  XXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                      L  DVS E   +N +   + K G LDI+  NAG+ G  +    I D   
Sbjct: 71  EIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAP---IDDLKP 127
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV--ASLMGGLGPHAYTVSKHAI 175
            E+D  I +N+RG  L +      +  R  G I+  +S+         G  AYT +K A 
Sbjct: 128 FEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQ 187
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNA-------------WKSCEDCMDSGKP 222
           V + +  A ELGK+ IRVN + P  + T++  N              W   +  +  G+P
Sbjct: 188 VAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQP 247
Query: 223 CXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                                  ++ D+AE   +L S+ +++++G  + +DGG
Sbjct: 248 G----------------------RSEDVAELIRFLVSERARHVTGSPVWIDGG 278

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 48/270 (17%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K L+GK+AIVTG ARGIG     +F + GA VV                       T L 
Sbjct: 193 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGG---TALW 249
Query: 71  CDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            DV+ +  +  +       H G+ DIL NNAG+    ++ K + + D   +D ++ +N+ 
Sbjct: 250 LDVTADDAVDKISEHLRDHHGGKADILVNNAGI----TRDKLLANMDDARWDAVLAVNL- 304
Query: 130 GAALGMKYAAKVMVPRRS----GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
              L      + +V   S    G +I  +S+A + G  G   Y  +K  ++G+T+  A  
Sbjct: 305 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 361
Query: 186 LGKYGIRVNCISPFGVATSMLV-------NAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           L   GI +N ++P  + T M            +     +  G+P                
Sbjct: 362 LAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPV--------------- 406
Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGH 268
                     D+AEA  Y AS  S  ++G+
Sbjct: 407 ----------DVAEAIAYFASPASNAVTGN 426

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           +LEGK+A+VTG  RGIG        + G KV V                         + 
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            +V + +DI  +    +   G+LDI+ +N+GV+        + D    EFD +  IN RG
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV----SFGHVKDVTPEEFDRVFTINTRG 141
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTACELGKY 189
                + A K +     G +I   S+      +  HA Y+ SK AI    +  A ++   
Sbjct: 142 QFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK 199
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
            I VN ++P G+ T M       C + + +G+            V+  + L+ V L   D
Sbjct: 200 KITVNVVAPGGIKTDMY---HAVCREYIPNGENLSNEEVDEYAAVQ-WSPLRRVGLPI-D 254
Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           IA    +LAS++  +++G  + +DGG
Sbjct: 255 IARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 24/272 (8%)
Query: 6   EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXP 64
           E+K    L  +  +VTGG +GIG     +F + GA V V                     
Sbjct: 32  ERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG 91
Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
            V  +  DVS      +     +   G LD++  NAG+   +++  ++T     +   ++
Sbjct: 92  NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIF-PEARLDTMTP---EQLSEVL 147
Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSKHAIVGLTKNTA 183
            +NV+G    ++     +     G +I T+S+   + G  G   Y  SK A +G  +  A
Sbjct: 148 DVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAA 207
Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGV 243
            EL   G+ VN I P  + T  LV+  +     M    P                   G+
Sbjct: 208 IELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM------------------GM 249
Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                DI   A +LA+DE+ YI+G  +VVDGG
Sbjct: 250 LGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 48/270 (17%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K L+GK+AIVTG ARGIG     +F + GA VV                       T L 
Sbjct: 201 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGG---TALW 257
Query: 71  CDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            DV+ +  +  +       H G+ DIL NNAG+    ++ K + + D   +D ++ +N+ 
Sbjct: 258 LDVTADDAVDKISEHLRDHHGGKADILVNNAGI----TRDKLLANMDDARWDAVLAVNL- 312
Query: 130 GAALGMKYAAKVMVPRRS----GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
              L      + +V   S    G +I  +S+A + G  G   Y  +K  ++G+T+  A  
Sbjct: 313 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 369
Query: 186 LGKYGIRVNCISPFGVATSMLV-------NAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           L   GI +N ++P  + T M            +     +  G+P                
Sbjct: 370 LAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPV--------------- 414
Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGH 268
                     D+AEA  Y AS  S  ++G+
Sbjct: 415 ----------DVAEAIAYFASPASNAVTGN 434

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 25/264 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK A+VTG A+GIG+A        GA V+                      +     D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIA---AD 60
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S    ++ L     +  G +DIL NNA ++       +  D D + +  II +N+ G  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV----PFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 133 LGMKYAA-KVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           +  +    +     ++G +IS AS     G     AY  +K  ++G T+  A ELGKY I
Sbjct: 117 IVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNI 176
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
             N ++P G+  S  V A    E                   V  L   KG   +   IA
Sbjct: 177 TANAVTP-GLIESDGVKASPHNE---------------AFGFVEXLQAXKG-KGQPEHIA 219
Query: 252 EAALYLASDESKYISGHNLVVDGG 275
           +   +LASD++++I+G  L VD G
Sbjct: 220 DVVSFLASDDARWITGQTLNVDAG 243

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 48/270 (17%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K L+GK+AIVTG ARGIG     +F + GA VV                       T L 
Sbjct: 217 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGG---TALW 273
Query: 71  CDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            DV+ +  +  +       H G+ DIL NNAG+    ++ K + + D   +D ++ +N+ 
Sbjct: 274 LDVTADDAVDKISEHLRDHHGGKADILVNNAGI----TRDKLLANMDDARWDAVLAVNL- 328
Query: 130 GAALGMKYAAKVMVPRRS----GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
              L      + +V   S    G +I  +S+A + G  G   Y  +K  ++G+T+  A  
Sbjct: 329 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 385
Query: 186 LGKYGIRVNCISPFGVATSMLV-------NAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           L   GI +N ++P  + T M            +     +  G+P                
Sbjct: 386 LAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPV--------------- 430
Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGH 268
                     D+AEA  Y AS  S  ++G+
Sbjct: 431 ----------DVAEAIAYFASPASNAVTGN 450

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K L+GK+A+VTG ARGIG     +F + GA VV                       T L 
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGG---TALT 265
Query: 71  CDVSLEQDIQNLINVTISKH--GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
            DV+ + D  + I   +++H  G++DIL NNAG+    ++ K + + D   +D +I +N 
Sbjct: 266 LDVTAD-DAVDKITAHVTEHHGGKVDILVNNAGI----TRDKLLANMDEKRWDAVIAVN- 319
Query: 129 RGAALGMKYAAKVMVPRR-------------SGCIISTASVASLMGGLGPHAYTVSKHAI 175
                       ++ P+R              G +I  +S+A + G  G   Y  +K  +
Sbjct: 320 ------------LLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGM 367
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSM 205
           +GL +  A  L   GI +N ++P  + T M
Sbjct: 368 IGLAEALAPVLADKGITINAVAPGFIETKM 397

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 48/270 (17%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K L+GK+AIVTG ARGIG     +F + GA VV                       T L 
Sbjct: 209 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGG---TALW 265
Query: 71  CDVSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
            DV+ +  +  +       H G+ DIL NNAG+    ++ K + + D   +D ++ +N+ 
Sbjct: 266 LDVTADDAVDKISEHLRDHHGGKADILVNNAGI----TRDKLLANMDDARWDAVLAVNL- 320
Query: 130 GAALGMKYAAKVMVPRRS----GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
              L      + +V   S    G +I  +S+A + G  G   Y  +K  ++G+T+  A  
Sbjct: 321 ---LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 377
Query: 186 LGKYGIRVNCISPFGVATSMLV-------NAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
           L   GI +N ++P  + T M            +     +  G+P                
Sbjct: 378 LAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPV--------------- 422
Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGH 268
                     D+AEA  Y AS  S  ++G+
Sbjct: 423 ----------DVAEAIAYFASPASNAVTGN 442

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG LG  +  +   +     + +++  N+ G 
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADEL----WLDVVETNLTGV 134
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 194
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 195 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 231

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 23  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 82
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG LG  +  +   +     + +++  N+ G 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADEL----WLDVVETNLTGV 138
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 199 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 235

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+G+  ++TGGA G+G A V  FV  GAKV                       V  +  D
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN---VLGIVGD 59
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD--FDANEFDNIIRINVRG 130
           V   +D +   +  +++ G++D L  NAG+    +    + +   DA  FD +  INV+G
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDA-AFDEVFHINVKG 118
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               +K     +V  R   I + ++      G GP  YT +KHAIVGL +  A EL  Y 
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNAGFYPNGGGP-LYTAAKHAIVGLVRELAFELAPY- 176
Query: 191 IRVNCISPFGVATSM 205
           +RVN +   G+ + +
Sbjct: 177 VRVNGVGSGGINSDL 191

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 115/288 (39%), Gaps = 35/288 (12%)
Query: 7   KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVX-----XXXXXXXXXXXXXXXXX 61
           + +   L GK+A +TG ARG G A        GA ++                       
Sbjct: 5   RSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAA 64
Query: 62  XXPLVTYL-------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD 114
              LV  +         DV   + +   +   + + GRLDI+  NAG+        S  D
Sbjct: 65  TVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI-----APMSAGD 119
Query: 115 FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-----AYT 169
              + + ++I +N+ G    +K A   +V + +G  I   S ++ + G+G        Y 
Sbjct: 120 ---DGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYV 176
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
            +KH +VGL +  A  L    IRVN I P GV T M+ N +          +        
Sbjct: 177 AAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFT---------REWLAKMAA 227
Query: 230 XXXLVRGLANLKGV-TLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                  + N   V  L   D+A A  +L SD+++YI+G  L VD GF
Sbjct: 228 ATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 111/274 (40%), Gaps = 39/274 (14%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L GK A+VTG ARG+G A        GA+V+                         +  D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E  I+   +   ++   +DIL NNAG+       K + + +   +  +I  N+  A 
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGI----QYRKPMVELELENWQKVIDTNLTSAF 122
Query: 133 LGMKYAAKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  + AAK M+ R SG  II+  S+ S         YT +K  I  LT + A E  ++ I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182
Query: 192 RVNCISPFGVATSM--------LVNAW-KSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
           + N I P  + T M          ++W KS       G+P                    
Sbjct: 183 QTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRP-------------------- 222
Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                 ++   A++L+S  S YI+G  + VDGG+
Sbjct: 223 -----EELIGTAIFLSSKASDYINGQIIYVDGGW 251

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 33/283 (11%)
Query: 1   MNLNTEKKAYKT------LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXX 53
           ++L TE   +++      L GK A VTGG+RGIG A  +     GA V +          
Sbjct: 11  VDLGTENLYFQSXXTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQ 70
Query: 54  XXXXXXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT 113
                          +  D    + I+  I  T+   G LDIL N+AG+         + 
Sbjct: 71  AVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW----HSAPLE 126
Query: 114 DFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS-VASLMGGLGPHAYTVSK 172
           +    +FD +  +N R   + ++ A++ +     G II+  S +A L+   G   Y+ SK
Sbjct: 127 ETTVADFDEVXAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASK 184
Query: 173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXX 232
            A+ GLTK  A +LG  GI VN + P     S   +   +  D  ++ +           
Sbjct: 185 AALAGLTKGLARDLGPRGITVNIVHP----GSTDTDXNPADGDHAEAQRERIA------- 233
Query: 233 LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                    G   + +DIA    +LA  + K+++G +L +DGG
Sbjct: 234 --------TGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +LEG+ A+VTG   G+G+A        GA+VV                       + L  
Sbjct: 6   SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGN--ASALLI 63
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D +     ++    + +  G  DIL NNAG++    +     +F   ++D ++ +N++  
Sbjct: 64  DFADPLAAKD----SFTDAG-FDILVNNAGII----RRADSVEFSELDWDEVMDVNLKAL 114
Query: 132 ALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               +  AK ++ + RSG +++ AS+ S  GG+   +YT +KH + GLTK  A E    G
Sbjct: 115 FFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKG 174
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           I VN I+P  + T+             ++             L R  A   G    + DI
Sbjct: 175 INVNAIAPGYIETN-------------NTEALRADAARNKAILERIPAGRWG---HSEDI 218
Query: 251 AEAALYLASDESKYISGHNLVVDGGF 276
           A AA++L+S  + Y+ G  L VDGG+
Sbjct: 219 AGAAVFLSSAAADYVHGAILNVDGGW 244

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 23/167 (13%)
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGC---IISTASVASLMGGLGPHAYTVSKHA 174
           +++D +I +N++G  L  + AA+ +V   +GC   II+ +S+   +G +G   Y  SK  
Sbjct: 114 DDWDKVIAVNLKGTFLVTQAAAQALV--SNGCRGSIINISSIVGKVGNVGQTNYAASKAG 171
Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLV 234
           ++GLT+  A ELG++GIR N + P  +AT M     +   D +    P            
Sbjct: 172 VIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIP------------ 219
Query: 235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
                  G      D+A+   +LAS++S YI+G ++ V GG   ++N
Sbjct: 220 ------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN 260

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 20/271 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           LEG  A+VTGG+RGIG   V      GA V                       V    CD
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66
Query: 73  VSLEQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +S   + Q L+N   +  HG+L+IL NNAG++     +K   D+   ++  I+ IN   A
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEAA 122
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
                 A   +     G ++  +SV+  +       Y  +K A+  LT+  A E  K  I
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
           RVN + P  +ATS++    +  E   +  K           + R      G   + +++A
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNK----------LIDRCALRRMG---EPKELA 229
Query: 252 EAALYLASDESKYISGHNLVVDGGFTTSKNC 282
               +L    + Y++G  + VDGG     NC
Sbjct: 230 AMVAFLCFPAASYVTGQIIYVDGGLMA--NC 258

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 20/271 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           LEG  A+VTGG+RGIG   V      GA V                       V    CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 73  VSLEQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +S   + Q L+N   +  HG+L+IL NNAG++     +K   D+   ++  I+ IN   A
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEAA 121
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
                 A   +     G ++  +SV+  +       Y  +K A+  LT+  A E  K  I
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
           RVN + P  +ATS++    +  E   +  K           + R      G   + +++A
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNK----------LIDRCALRRMG---EPKELA 228
Query: 252 EAALYLASDESKYISGHNLVVDGGFTTSKNC 282
               +L    + Y++G  + VDGG     NC
Sbjct: 229 AMVAFLCFPAASYVTGQIIYVDGGLMA--NC 257

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 23  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 82
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG  G  +  +   +     + +++  N+ G 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL----WLDVVETNLTGV 138
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 199 GITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFD 235

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDV 73
           +GK AIV GG  G G ATVR  V+ GA+V+                    P V  L  D+
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---PRVHALRSDI 63
Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           +   +I  L        G +D+L  NAGV    S+ +         +D    +N +GA  
Sbjct: 64  ADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEPFDQVSEASYDRQFAVNTKGAFF 119
Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
            ++    ++  R  G I+ T+SVA   G  G   Y+ SK A+V      A EL   GIRV
Sbjct: 120 TVQRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRV 177
Query: 194 NCISP-------FGVA--TSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVT 244
           N +SP        GVA  T      +K+  D +   K                       
Sbjct: 178 NSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGT------------------- 218
Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             A ++A A L+LA  E+ + +G  L VDGG 
Sbjct: 219 --ADEVARAVLFLAF-EATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDV 73
           +GK AIV GG  G G ATVR  V+ GA+V+                    P V  L  D+
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---PRVHALRSDI 62
Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           +   +I  L        G +D+L  NAGV    S+ +         +D    +N +GA  
Sbjct: 63  ADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEPFDQVSEASYDRQFAVNTKGAFF 118
Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
            ++    ++  R  G I+ T+SVA   G  G   Y+ SK A+V      A EL   GIRV
Sbjct: 119 TVQRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRV 176
Query: 194 NCISP-------FGVA--TSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVT 244
           N +SP        GVA  T      +K+  D +   K                       
Sbjct: 177 NSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGT------------------- 217
Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             A ++A A L+LA  E+ + +G  L VDGG 
Sbjct: 218 --ADEVARAVLFLAF-EATFTTGAKLAVDGGL 246

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 23  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 82
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG  G  +  +   +     + +++  N+ G 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL----WLDVVETNLTGV 138
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 190 GIRVNCISPFGVATSM-------LVNAWK-SCEDCMD 218
           GI VN + P  V T M         + W+ S E+  D
Sbjct: 199 GITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFD 235

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG  G  +  +   +     + +++  N+ G 
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL----WLDVVETNLTGV 134
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 194
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 195 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 231

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 3   TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 62
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG  G  +  +   +     + +++  N+ G 
Sbjct: 63  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL----WLDVVETNLTGV 118
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 119 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 178
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 179 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 215

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 23  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 82
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG  G  +  +   +     + +++  N+ G 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL----WLDVVETNLTGV 138
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELART 198
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 199 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 235

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           T + ++A+VTG   GIG    R   K G +V                            C
Sbjct: 23  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 82
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV    +I+ L+   + ++G +D+L NNAG  G  +  +   +     + +++  N+ G 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL----WLDVVETNLTGV 138
Query: 132 ALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
               K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 190 GIRVNCISPFGVATSMLVNA-------WK-SCEDCMD 218
           GI VN + P  V T M  +        W+ S E+  D
Sbjct: 199 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD 235

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 19/277 (6%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV-----XXXXXXXXXXXXXXXXXXXXPLV- 66
            EGK A++TGGARG+G +      + GA +                           LV 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 67  -TYLHC-----DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
            T   C     DV     +++ +       G +DI   NAG+    S    + + ++ ++
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI----STIALLPEVESAQW 123
Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           D +I  N+ G    +   A  M+ R  G I++ +S+          +Y  SK  ++GLTK
Sbjct: 124 DEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTK 183
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANL 240
             A +L  YGI VN ++P  + T M  N +       D  KP          +   L   
Sbjct: 184 CAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPT---LKDVESVFASLHLQ 240
Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               LK  ++  A L+L  + S +I+G  L +D G T
Sbjct: 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           L+G+  +VTGG +GIG     +F + GA V V                      V  +  
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS       L    + + G +D++  NAGV         +      + + I  +NV G 
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVF----PDAPLATMTPEQLNGIFAVNVNGT 123
Query: 132 ALGMKYAAKVMVPRRSGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
              ++     ++   SG ++ T+S+   + G  G   Y  +K A +G  +  A EL  + 
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           I VN I P  + T  L+   +     M    P                   G      DI
Sbjct: 184 ITVNAIMPGNIMTEGLLENGEEYIASMARSIPA------------------GALGTPEDI 225
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
              A +LA+ E+ YI+G  + VDGG
Sbjct: 226 GHLAAFLATKEAGYITGQAIAVDGG 250

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 26/269 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-----VT 67
           L+G++AIVTGGA GIG+A V+  ++ G+ VV                    P      V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNN-AGVLGNQSKHKSITDFDANEFDNIIRI 126
            + C++  E+++ NL+  T+   G+++ L NN  G   + ++H S   + A     ++  
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHA-----VLET 130
Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           N+ G     K      +    G I++          L  H+   ++  +  LTK+ A E 
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSLALEW 189
Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLK 246
              GIR+NC++P  + +   V  + S       G              +  A   GV   
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGS-----------FQKIPAKRIGV--- 235
Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGG 275
             +++    +L S  + +I+G ++ VDGG
Sbjct: 236 PEEVSSVVCFLLSPAASFITGQSVDVDGG 264

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 26/281 (9%)
Query: 1   MNLNTEKKAYKTL-EGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXX 58
           ++L TE   +++  +  + +VTGG+RGIG A  RL  + G +V V               
Sbjct: 11  VDLGTENLYFQSXSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAA 70
Query: 59  XXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                     +  DV    DI    +    + GRLD L NNAG++      + + +    
Sbjct: 71  ITESGGEAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIV---DYPQRVDEXSVE 127
Query: 119 EFDNIIRINVRGAALGMKYAAK---VMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHA 174
             +  +R+NV G+ L    A +    +   + G I++ +S A+++G    +  Y  SK A
Sbjct: 128 RIERXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAA 187
Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLV 234
           I   T   A E+   GIRVN + P  + T +  +A     D      P            
Sbjct: 188 IDTFTIGLAREVAAEGIRVNAVRPGIIETDL--HASGGLPDRAREXAPSVPXQRAG---- 241
Query: 235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                         ++A+A LYL S  + Y++G  L V GG
Sbjct: 242 -----------XPEEVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 27/270 (10%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           +L+GK+A VTG + GIG A    + + GA V                            C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           ++S  + ++  I+      G +D+   NAGV   Q     + ++D+  ++ II +++ G 
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDS--WNKIISVDLNGV 148
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH---AYTVSKHAIVGLTKNTACELGK 188
                   K+      G +I T+S++  +  + P     Y  +K A   L K+ A E   
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNI-PQLQAPYNTAKAACTHLAKSLAIEWAP 207
Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMD-SGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
           +  RVN ISP  + T           D  D + K           L R     +G+T   
Sbjct: 208 FA-RVNTISPGYIDT-----------DITDFASKDMKAKWWQLTPLGR-----EGLT--- 247
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +++    LYLAS+ S + +G ++V+DGG+T
Sbjct: 248 QELVGGYLYLASNASTFTTGSDVVIDGGYT 277

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 29/274 (10%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTY 68
           +  L+GK  ++TG ++GIG AT RLF + GAKV +                        +
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF 61
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
              D++  +  Q L++  ++K G +D+L NNAG L  +   K + + D   +D ++  N+
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGR---KPLPEIDDTFYDAVMDANI 118
Query: 129 RGAALGMKY-----AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV-GLTKNT 182
           R   +  K+     AA      ++  +IST S+A   GG        +  A +  + KN 
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNW 178
Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKG 242
                K G+R N +SP  V T+   +  +   D + +G P                   G
Sbjct: 179 VDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPM------------------G 220
Query: 243 VTLKARDIAEAALYLASD-ESKYISGHNLVVDGG 275
               A ++A A L+ AS   S YI+G  L ++GG
Sbjct: 221 RFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 23/260 (8%)
Query: 18  AIVTGGARGIG-EATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLE 76
           A++T G +G+G + T +L  K  +  V                      + ++  DV+ +
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMK 136
           +D+  ++   +S  G++D L NNAG      + K + D++ +E++ +I+ N+      +K
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLINNAGPY--VFERKKLVDYEEDEWNEMIQGNLTAVFHLLK 127
Query: 137 YAAKVMVPRRSGCIIST--ASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
               VM  +  G II+       S  G +   A+  +K  +V LTK  A E  +YGI  N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAA 254
            + P  +   M     +      +   P                   G +    DIA   
Sbjct: 188 MVCPGDIIGEMKEATIQEARQLKEHNTPI------------------GRSGTGEDIARTI 229
Query: 255 LYLASDESKYISGHNLVVDG 274
            +L  D+S  I+G  + V G
Sbjct: 230 SFLCEDDSDMITGTIIEVTG 249

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           + G++ +VTG +RGIG        K GA V                          + CD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 73  VSLEQDIQNLI-NVTISKHGRLDILFNNAGVLGNQS----KHKSITDFDANEFDNIIRIN 127
            S E ++++L   V   + GRLD+L NNA   G Q+    ++K+  +  A+ +D+I  + 
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNA-YAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           +RG      Y A++MVP   G I+  +S  SL        Y V K A   L  + A EL 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV-PYGVGKAACDKLAADCAHELR 180
Query: 188 KYGIRVNCISPFGVATSML 206
           ++G+    + P  V T +L
Sbjct: 181 RHGVSCVSLWPGIVQTELL 199

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 85/206 (41%), Gaps = 13/206 (6%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQD 78
           ++TG +RGIGEAT RL    G +V                     PL      DV  E D
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPL----PGDVREEGD 64
Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
               +       G L  L NNAGV       K + +    E+  ++  N+ GA LG+++A
Sbjct: 65  WARAVAAMEEAFGELSALVNNAGV----GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120
Query: 139 AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISP 198
              ++ R  G I++  S+A      G  AY  SK  ++GL      +L +  +RV  + P
Sbjct: 121 VPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLP 180
Query: 199 FGVATSMLVN----AWK-SCEDCMDS 219
             V T    N    AWK   ED   +
Sbjct: 181 GSVDTGFAGNTPGQAWKLKPEDVAQA 206

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 111/282 (39%), Gaps = 46/282 (16%)
Query: 10  YKT---LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLV 66
           Y+T   L+G  A VTG   GIG    R F   GA+++                     + 
Sbjct: 3   YRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA--VA 60
Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             +  DV+ + +              + IL N+AG+      H ++   DA  +  ++ +
Sbjct: 61  ARIVADVT-DAEAMTAAAAEAEAVAPVSILVNSAGI---ARLHDALETDDAT-WRQVMAV 115
Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA--YTVSKHAIVGLTKNTAC 184
           NV G     +   + MV R +G I++  S++  +      A  Y  SK A+  LT+  A 
Sbjct: 116 NVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAA 175
Query: 185 ELGKYGIRVNCISPFGVATSM---------LVNAWKSCEDCMDSGKPCXXXXXXXXXLVR 235
           E    G+RVN ++P  VAT M         L   W         G+P             
Sbjct: 176 EWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPS------------ 223
Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                        +IA AAL+LAS  + Y++G  L VDGG+T
Sbjct: 224 -------------EIAAAALFLASPAASYVTGAILAVDGGYT 252

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
            +G+ A+VTGGA GIG AT   F + GA++V                         + CD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V    ++  L +      G +D++F+NAG++        +   + +++  +I I++ G+ 
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIV----VAGPLAQMNHDDWRWVIDIDLWGSI 144
Query: 133 LGMKYAAKVMVPR-----RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
               +A +  +PR       G I  TAS A L+   G   Y V+K+ +VGL +  A E+ 
Sbjct: 145 ----HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVK 200
Query: 188 KYGIRVNCISPFGVATSMLVNA 209
             GI V+ + P  V T ++ N+
Sbjct: 201 PNGIGVSVLCPMVVETKLVSNS 222

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 25/265 (9%)
Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-VTYLHCD 72
           + K A+VTG +RG+G+A      ++G  +V                     + V  +  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNA--GVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           V     I+ +        GRLD+  NNA  GVL      + + + +   +D  + IN + 
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL------RPVMELEETHWDWTMNINAKA 116
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                + AAK+M     G I+S +S+ S+          VSK A+  LT+  A EL    
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQ 176
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           I VN +S   + T  L + + + ED ++  +                    G  ++ +D+
Sbjct: 177 IIVNAVSGGAIDTDALKH-FPNREDLLEDARQNTPA---------------GRMVEIKDM 220
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
            +   +L S ++  I G  ++VDGG
Sbjct: 221 VDTVEFLVSSKADMIRGQTIIVDGG 245

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXX--XXXXXXXXXXXXPLVTY 68
           K   G+ A VTGGA G+G   VR  +  G KV                       P V  
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+  +  +   +   ++ G + IL NNAGV   Q   +S  D    ++D ++ +N+
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYD----DWDWLLGVNL 119
Query: 129 RGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
            G   G+      MV R      + G +++TAS+A+ +    P  Y  +K A+ GL+++ 
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179
Query: 183 ACELGKYGIRVNCISP 198
              L KY I V+ + P
Sbjct: 180 HYSLLKYEIGVSVLCP 195

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 19/269 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-VTYLHC 71
           + GK+A++TG + GIG A    F K GA +V                     + V  +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR-- 129
           DV+  + +  ++    S  G  DIL NNAG   N++  ++  +     ++ ++   VR  
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 130 -GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            G   GM+        R  G II  AS+ ++        Y V+K A++  +K  A E+ K
Sbjct: 125 RGLVPGMR-------ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 189 YGIRVNCISPFGVATSMLVNAWKS-CEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
             IRVNCI+P  + T   +   K   +D     K            ++  A+        
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFAS-------P 230
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
            ++A   ++L S+ + Y  G    VDGG 
Sbjct: 231 EELANFFVFLCSERATYSVGSAYFVDGGM 259

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 105/267 (39%), Gaps = 33/267 (12%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+  +VTG  +GIG  TV+     GA+VV                    P+   L   
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW 64
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            + E+ + ++        G +D+L NNA V    +  +   +     FD    +N+R   
Sbjct: 65  EATERALGSV--------GPVDLLVNNAAV----ALLQPFLEVTKEAFDRSFEVNLRAVI 112
Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ ++ R   G I++ +S  S         Y  +K A+  LTK  A ELG + I
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 192 RVNCISPFGVATSMLVNAWKSCEDC--MDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           RVN ++P  V TSM    W        M +  P                   G   +   
Sbjct: 173 RVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL------------------GKFAEVEH 214
Query: 250 IAEAALYLASDESKYISGHNLVVDGGF 276
           +  A L+L SD S   +G  L V+GGF
Sbjct: 215 VVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 105/267 (39%), Gaps = 33/267 (12%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+  +VTG  +GIG  TV+     GA+VV                    P+   L   
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW 64
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            + E+ + ++        G +D+L NNA V    +  +   +     FD    +N+R   
Sbjct: 65  EATERALGSV--------GPVDLLVNNAAV----ALLQPFLEVTKEAFDRSFEVNLRAVI 112
Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ ++ R   G I++ +S  S         Y  +K A+  LTK  A ELG + I
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 192 RVNCISPFGVATSMLVNAWKSCEDC--MDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           RVN ++P  V TSM    W        M +  P                   G   +   
Sbjct: 173 RVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL------------------GKFAEVEH 214
Query: 250 IAEAALYLASDESKYISGHNLVVDGGF 276
           +  A L+L SD S   +G  L V+GGF
Sbjct: 215 VVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 24/266 (9%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVS 74
           ++A VTGG  G+G A  R     G  V V                            DV+
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
             +  +      ++  G++D+L NNAG+    ++  +       ++D ++R ++      
Sbjct: 86  DFESCERCAEKVLADFGKVDVLINNAGI----TRDATFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            K     MV RR G I++  SV    G  G   Y  +K  I G TK  A E  K GI VN
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK-GVTLKARDIAEA 253
            +SP  +AT+M+       +D +++               + L  +  G   +  ++A  
Sbjct: 202 TVSPGYLATAMVEAV---PQDVLEA---------------KILPQIPVGRLGRPDEVAAL 243
Query: 254 ALYLASDESKYISGHNLVVDGGFTTS 279
             +L SD++ +++G +L ++GG   S
Sbjct: 244 IAFLCSDDAGFVTGADLAINGGMHMS 269

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 66  VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR 125
           + Y   D++ E +    ++   + HGRL  + + AG          IT  D+  +   + 
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG---GSENIGPITQVDSEAWRRTVD 121
Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           +NV G    +K+AA+ MV    G  +  +S+A+        AY V+K A+  L +  A E
Sbjct: 122 LNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADE 181
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
           LG   +RVN I P  + T ++    +S E   D    C                      
Sbjct: 182 LGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAM-CTPLPRQG--------------- 225
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
           +  D+A  A++L SD + +++G  + VDGG
Sbjct: 226 EVEDVANMAMFLLSDAASFVTGQVINVDGG 255

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 13/266 (4%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL-VTYLHC 71
           + GK+A++TG + GIG A    F K GA +V                     + V  +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+  + +  ++    S  G  DIL NNAG   N++    I +    ++     ++V  A
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNET----IMEAADEKWQFYWELHVMAA 120
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +     M  R  G II  AS+ ++        Y V+K A++  +K  A E+ K  I
Sbjct: 121 VRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 192 RVNCISPFGVATSMLVNAWKS-CEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           RVNCI+P  + T   +   K   +D     K            ++  A+         ++
Sbjct: 181 RVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFAS-------PEEL 233
Query: 251 AEAALYLASDESKYISGHNLVVDGGF 276
           A   ++L S+ + Y  G    VDGG 
Sbjct: 234 ANFFVFLCSERATYSVGSAYFVDGGM 259

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 45/282 (15%)
Query: 1   MNLNTEKKAYKTL---EGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXX 57
           ++L TE   +++    + K+ ++TG ++GIG   VR +     +VV              
Sbjct: 11  VDLGTENLYFQSXXRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--- 67
Query: 58  XXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                 P +  +  D+S  +    ++   I + GR+D L NNAGV       K   +   
Sbjct: 68  ------PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVF----LAKPFVEXTQ 117
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIIS--TASVASLMGGLGPHAYTVSKHAI 175
            ++D+ + +NV G     + AA   + + SG I+S  T+ V     G      +++K  +
Sbjct: 118 EDYDHNLGVNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGL 177
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVR 235
             +T++ A E  + G+RVN +SP  + T        S                       
Sbjct: 178 NAVTRSLAXEFSRSGVRVNAVSPGVIKTPXHPAETHST---------------------- 215
Query: 236 GLANLK--GVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            LA L   G   + RD+ +A LYL  + + +I+G  L VDGG
Sbjct: 216 -LAGLHPVGRXGEIRDVVDAVLYL--EHAGFITGEILHVDGG 254

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 29/268 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
             G  A+VTG  +GIG  TV+     GAKVV                    P+   L   
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW 64
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            + E+ +  +        G +D+L NNA ++  Q       +     FD    +N+R   
Sbjct: 65  DATEKALGGI--------GPVDLLVNNAALVIMQP----FLEVTKEAFDRSFSVNLRSVF 112
Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ M+ R   G I++ +S+ + +       Y+ +K A+  LTK  A ELG + I
Sbjct: 113 QVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172
Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIA 251
           RVN ++P    T +L +  K       S  P           +R  A ++       D+ 
Sbjct: 173 RVNSVNP----TVVLTDMGKKV-----SADPEFARKLKERHPLRKFAEVE-------DVV 216
Query: 252 EAALYLASDESKYISGHNLVVDGGFTTS 279
            + L+L SD S   SG  ++VD G+  S
Sbjct: 217 NSILFLLSDRSASTSGGGILVDAGYLAS 244

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 18/265 (6%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAK--VVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDV 73
           K+A+VTGGA+GIG          G    V                         ++  DV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           + + +  + I+    K G  D+L NNAG+    ++ K + +    +   I  +NV     
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLVNNAGI----AQIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 134 GMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           G++ A++        G II+ AS+A++ G     AY+ +K A+ GLT+  A EL   G  
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMD--SGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           VN  +P  V T M    W+  +  +   +GKP           +       G      D+
Sbjct: 179 VNAYAPGIVGTGM----WEQIDAELSKINGKPIGENFKEYSSSIA-----LGRPSVPEDV 229
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A    +LAS+ S Y++G  ++VDGG
Sbjct: 230 AGLVSFLASENSNYVTGQVMLVDGG 254

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 26/279 (9%)
Query: 1   MNLNTEKKAYKT-LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VXXXXXXXXXXXXXXX 58
           ++L TE   +++    +  +VTG ++GIG A  R     G  + V               
Sbjct: 11  VDLGTENLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNA 70
Query: 59  XXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                     L  DV+  +  + ++   I++HG    + +NAG+    ++  +      +
Sbjct: 71  IVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGI----ARDAAFPALSND 126
Query: 119 EFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
           ++D +I  N+      ++     M+  R+ G II+ +SV+ +MG  G   Y+ +K  I+G
Sbjct: 127 DWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIG 186
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGL 237
            TK  A EL K  I VNCI+P  + T M+     + ++ M S  P               
Sbjct: 187 ATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAM-SMIPMKRMG---------- 235
Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                   +A ++A  A YL SD + Y++   + ++GG 
Sbjct: 236 --------QAEEVAGLASYLMSDIAGYVTRQVISINGGM 266

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 8/226 (3%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXX 57
           M+L+ + K    L+ +I +VTG + GIG      + ++GA V+                 
Sbjct: 1   MSLHYQPKQ-DLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIA 59
Query: 58  XXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                 P    L       ++ + + +   + + RLD + +NAG+LG   +   +++ D 
Sbjct: 60  DEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLG---EIGPMSEQDP 116
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
             + +++++NV    +  +    +++   +G ++ T+S     G     AY  SK A  G
Sbjct: 117 QIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEG 176
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPC 223
           + +  A E     +RVNCI+P G  TSM  +A+ + ED      P 
Sbjct: 177 MMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPT-EDPQKLKTPA 221

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH-- 70
            +G++ +VTG   G+G A    F + GA VV                     +       
Sbjct: 28  FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRG 87
Query: 71  ----CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
                +    ++ + ++   +   GR+D++ NNAG+L ++S  + I+D D   +D I R+
Sbjct: 88  GKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFAR-ISDED---WDIIHRV 143
Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           ++RG+    + A + M  ++ G II T+S + + G  G   Y+ +K  ++GL  + A E 
Sbjct: 144 HLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEG 203
Query: 187 GKYGIRVNCISP 198
            K  I  N I+P
Sbjct: 204 RKSNIHCNTIAP 215

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 107/265 (40%), Gaps = 14/265 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXX-PLVTYLHC 71
           L+GK+A+VTG  RGIG A      + GAKVV                          +  
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+    +I  L +  ++  G LDI  +N+GV+        + D    EFD +  +N RG 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV----SFGHLKDVTEEEFDRVFSLNTRGQ 131
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTACELGKYG 190
               + A + +     G I+ T+S  S    +  H+ Y+ SK A+    +  + + G   
Sbjct: 132 FFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           I VN ++P G  T M     +     + +G                  +  G     +D+
Sbjct: 190 ITVNAVAPGGTVTDMF---HEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW---PQDV 243
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A    +L S E ++++G  L +DGG
Sbjct: 244 ANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 106/267 (39%), Gaps = 31/267 (11%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           K+ I+TGG+ G G+     F K GA+VV                      +  +  DV  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             DIQ  I     K GR+DIL NNA   GN        D   N ++++I I + G     
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNAA--GNFICPAE--DLSVNGWNSVINIVLNGTFYCS 122
Query: 136 KYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG-KYGIRV 193
           +   K  + +   G II+  +  +   G G      +K  ++  TK  A E G KYGIRV
Sbjct: 123 QAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRV 182
Query: 194 NCISPFGVA-TSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL----KAR 248
           N I+P  +  T      W S E    +                    ++ V L       
Sbjct: 183 NAIAPGPIERTGGADKLWISEEXAKRT--------------------IQSVPLGRLGTPE 222
Query: 249 DIAEAALYLASDESKYISGHNLVVDGG 275
           +IA  A YL SDE+ YI+G     DGG
Sbjct: 223 EIAGLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 34/259 (13%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQD 78
           IVTGG  GIG+     F++ G KV                     P + Y H DV+    
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER----PNLFYFHGDVADPLT 61
Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
           ++  +   + K  R+D+L NNA   G++    S+      EFD I+ + ++ A   +   
Sbjct: 62  LKKFVEYAMEKLQRIDVLVNNA-CRGSKGILSSLL---YEEFDYILSVGLK-APYELSRL 116
Query: 139 AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISP 198
            +  + +  G II+ AS  +        AY  +K  IV LT   A  LG   + VNCI+P
Sbjct: 117 CRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAP 175
Query: 199 FGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLA 258
             +  +       + EDC                     A   G     +DI+   L+L 
Sbjct: 176 GWINVTEQQEF--TQEDCA--------------------AIPAGKVGTPKDISNMVLFLC 213
Query: 259 SDESKYISGHNLVVDGGFT 277
             +  +I+G  ++VDGG +
Sbjct: 214 --QQDFITGETIIVDGGMS 230

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           ++A+VTG + GIG A  R  V+ G KVV                        L+ Y  CD
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY-RCD 91
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S E+DI ++ +   S+H  +DI  NNAG+    ++  ++     + + ++  +NV   +
Sbjct: 92  LSNEEDILSMFSAIRSQHSGVDICINNAGL----ARPDTLLSGSTSGWKDMFNVNVLALS 147
Query: 133 LGMKYAAKVMVPRR--SGCIISTASVA--SLMGGLGPHAYTVSKHAIVGLTKNTACEL-- 186
           +  + A + M  R    G II+  S++   ++     H Y+ +K+A+  LT+    EL  
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 207
Query: 187 GKYGIRVNCISPFGVATSM 205
            +  IR  CISP  V T  
Sbjct: 208 AQTHIRATCISPGVVETQF 226

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 64  PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
           P  TYL  ++  +   ++ +  TI+  GRLD L NNAGV            F A+   N+
Sbjct: 55  PRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNL 114
Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           I          M +     +    G I++ +S  ++ G      Y  SK A + LT+  A
Sbjct: 115 IHY------YAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWA 168
Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGV 243
             L ++G+RVN + P  V T +  N   + ED      P          +  G    +  
Sbjct: 169 VALREHGVRVNAVIPAEVMTPLYRNWIATFED------PEAKLAEIAAKVPLG----RRF 218
Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           T    +IA+ A++L S  + + +G  L VDGG+T
Sbjct: 219 T-TPDEIADTAVFLLSPRASHTTGEWLFVDGGYT 251

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXX 57
           M+L+ + K    L  +I +VTG + GIG      + ++GA V+                 
Sbjct: 1   MSLHYQPKQ-DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN 59
Query: 58  XXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                 P    L       +D Q L       + RLD + +NAG+LG+      +++ D 
Sbjct: 60  EETGRQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVC---PMSEQDP 116
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
             + +++++NV    +  +    +++   +G ++ T+S     G     AY  SK A  G
Sbjct: 117 QVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEG 176
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKS 212
           + +  A E  +  +RVNCI+P G  T+M  +A+ +
Sbjct: 177 MMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT 210

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 14/265 (5%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXX-PLVTYLHC 71
           L+GK+A+VTG  RGIG A      + GAKVV                          +  
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+    +I  L +  ++  G LDI  +N+GV+        + D    EFD +  +N RG 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV----SFGHLKDVTEEEFDRVFSLNTRGQ 131
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTACELGKYG 190
               + A + +     G I+ T+S  S    +  H+ ++ SK A+    +  + + G   
Sbjct: 132 FFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKK 189
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           I VN ++P G  T M     +     + +G                  +  G     +D+
Sbjct: 190 ITVNAVAPGGTVTDMF---HEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW---PQDV 243
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A    +L S E ++++G  L +DGG
Sbjct: 244 ANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK+A++TG + GIGEAT R     GA V                       V  L  D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEFDNIIRINVRG 130
           V+  Q +   +  T+   G LDIL NNAG+  LG       + D D  ++  +I  N+  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLG------PVEDADTTDWTRMIDTNL-- 116
Query: 131 AALGMKYAAKVMVP---RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
             LG+ Y  +  +P   R  G ++  +S+A  +       Y  +K  +   ++    E+ 
Sbjct: 117 --LGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 188 KYGIRVNCISP 198
           + G+RV  I P
Sbjct: 175 ERGVRVVVIEP 185

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+ ++ IVTG + G+G A  R   + GA V+                      V + + D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAA---VRFRNAD 61
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAG------VLGNQSKHKSITDFDANEFDNIIRI 126
           V+ E D    +     + G +  L N AG      +LG    H        + F   + +
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHA------LDSFARTVAV 115
Query: 127 NVRGAALGMKYAAKVM------VPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           N+ G    ++ AA+V            G I++TAS+A+  G +G  AY  SK  +  LT 
Sbjct: 116 NLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL 175
Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             A EL ++GIRV  I+P    T       +  +D + +  P
Sbjct: 176 PAARELARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVP 217

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 15/191 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L+GK+A++TG + GIGEAT R     GA V                       V  L  D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV--LGNQSKHKSITDFDANEFDNIIRINVRG 130
           V+  Q +   +  T+   G LDIL NNAG+  LG       + D D  ++   I  N+  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIXLLG------PVEDADTTDWTRXIDTNL-- 116
Query: 131 AALGMKYAAKVMVP---RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
             LG+ Y  +  +P   R  G ++  +S+A  +       Y  +K  +   ++    E+ 
Sbjct: 117 --LGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 188 KYGIRVNCISP 198
           + G+RV  I P
Sbjct: 175 ERGVRVVVIEP 185

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLE 76
           +A+VTGGA G+G AT +  +  GA+VV                        +   DV+ E
Sbjct: 11  VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRA------RFAAADVTDE 64
Query: 77  QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD-FDANEFDNIIRINVRGAALGM 135
             + + +++     G L I+ N AG  GN  +  S    F    F  I+ IN+ G+   +
Sbjct: 65  AAVASALDLA-ETMGTLRIVVNCAGT-GNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVL 122
Query: 136 KYAAKVMV--------PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           + AA+ +             G II+TASVA+  G +G  AY+ SK  +VG+T   A +L 
Sbjct: 123 RLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 182
Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
            + IRV  I+P    T +L +  +     +    P
Sbjct: 183 SHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVP 217

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 30/232 (12%)
Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH--- 70
           +G++A+VTG   G+G     LF + GAKVV                     +V  +    
Sbjct: 18  DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI-VVDEIRKAG 76
Query: 71  ----CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
                D +   D   +I   I   GR+DIL NNAG+L    + +S+      +++ +  +
Sbjct: 77  GEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGIL----RDRSLVKTSEQDWNLVNDV 132
Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           +++G+    + A   M  +  G II T+S + + G  G   YT +K  ++GL    A E 
Sbjct: 133 HLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEG 192
Query: 187 GKYGIRVNCISPF-------GVATSMLVNAWKS----------C-EDCMDSG 220
            +  +  N I P        G+   +L N  K           C E C D+G
Sbjct: 193 ARNNVLCNVIVPTAASRMTEGILPDILFNELKPKLIAPVVAYLCHESCEDNG 244

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 37/277 (13%)
Query: 12  TLEGKIAIVTG--GARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY- 68
           +L+GK+ +VTG  G +G+G    R   + GA V                        TY 
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEK----TYG 72
Query: 69  -----LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
                  C V   +  + L+   ++  G++D    NAG   +      I D     ++++
Sbjct: 73  IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD----SGILDGSVEAWNHV 128
Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKN 181
           +++++ G     K        R +G ++ TAS++  +        +Y V+K   + + ++
Sbjct: 129 VQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARS 188
Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK 241
            A E   +  RVN ISP  + T +     K  +    S  P                   
Sbjct: 189 LANEWRDFA-RVNSISPGYIDTGLSDFVPKETQQLWHSMIPM------------------ 229
Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
           G    A+++  A +Y ASD S Y +G +L++DGG+TT
Sbjct: 230 GRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT 266

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 118/296 (39%), Gaps = 54/296 (18%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           ++ K+ +VTGGARG G +      + GA ++                    PL T    +
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEY-------PLATSRDLE 60
Query: 73  -------------VSLEQDIQNLINVT------ISKHGRLDILFNNAGV--LGNQSKHKS 111
                         + E D+++   V+      +++ G+LD++  NAG+  LG    H  
Sbjct: 61  EAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG---AHLP 117
Query: 112 ITDF-DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA--- 167
           +  F DA + D +  IN   AAL    +           II+T SVA L+    P     
Sbjct: 118 VQAFADAFDVDFVGVINTVHAALPYLTSG--------ASIITTGSVAGLIAAAQPPGAGG 169
Query: 168 --------YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDS 219
                   Y+ +K  +   T   A +L    IR N I P  V T ML +A    +   D 
Sbjct: 170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDL 229
Query: 220 GKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             P           ++ +       ++A DI+ A  +LASDES+Y++G    VD G
Sbjct: 230 EAPSRADALLAFPAMQAMPT---PYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 27/267 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXX--PLVTYLH 70
           L+ + A+VTGG  GIG A    + + GA V                            L 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S E   ++L++      G LDIL   A V G Q+    I D  + +F     +NV  
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDIL---ALVAGKQTAIPEIKDLTSEQFQQTFAVNVF- 162
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA--YTVSKHAIVGLTKNTACELGK 188
           A   +   A  ++P+    II+T+S+ +      PH   Y  +K AI+  ++  A ++ +
Sbjct: 163 ALFWITQEAIPLLPK-GASIITTSSIQAYQPS--PHLLDYAATKAAILNYSRGLAKQVAE 219
Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKAR 248
            GIRVN ++P  + T++ ++  ++ +     G+                        +  
Sbjct: 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAG----------------QPA 263
Query: 249 DIAEAALYLASDESKYISGHNLVVDGG 275
           ++A   +YLAS ES Y++     V GG
Sbjct: 264 ELAPVYVYLASQESSYVTAEVHGVCGG 290

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           K+ ++TG + GIGE   R     GAK++                            DV+ 
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
              +       +   GR+D+L NNAGV+        +     +E++ +I +N++G   G+
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVM----PLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
                +M  +RSG II+  S+ +L        Y  +K A+  ++     E     IRV C
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178
Query: 196 ISPFGVATSML 206
           ++P GV  S L
Sbjct: 179 VNP-GVVESEL 188

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 48/283 (16%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           Y +L G+IA+VTGG+RGIG+   +  ++ GA+V                      L  Y 
Sbjct: 24  YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATR------LSAYG 77
Query: 70  HC-----DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
            C     D+S E   + L         RLDIL NNAG     S   ++  +  + ++ ++
Sbjct: 78  DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGT----SWGAALESYPVSGWEKVM 133
Query: 125 RINVRGAALGMKYAAKVMVPRRSGC------IISTASVASLMG-GLGPHAYTVSKHAIVG 177
           ++NV      ++    ++  RRS        +I+  SVA +   G   +AY  SK A+  
Sbjct: 134 QLNVTSVFSCIQQLLPLL--RRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQ 191
Query: 178 LTKNTACELGKYGIRVNCISPFGVATSM---LVNAWKSCEDCMDSGK-PCXXXXXXXXXL 233
           L++  A EL    I VN I+P    + M   + N  ++ E   DS   P           
Sbjct: 192 LSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALE--ADSASIPM---------- 239
Query: 234 VRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                   G   +  ++A  A+ LA     Y++G+ + +DGGF
Sbjct: 240 --------GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 109/288 (37%), Gaps = 47/288 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           +E   A+VTG A+ IG A      + G +VV                       T + C 
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 73  VSL------EQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFDN 122
             L          + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 123 IIRINVRGAA---LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHA------YT 169
              I     A   L M +A      R+ G    C  S  S+ +L   +          Y 
Sbjct: 121 AELIGTNAIAPFLLTMSFAQ-----RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 175
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
           + KHA+VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D           
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW--------- 221
Query: 230 XXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 222 -----RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 106/283 (37%), Gaps = 37/283 (13%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           +E   A+VTG A+ IG A      + G +VV                       T + C 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 73  VSL------EQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFD- 121
             L          + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 122 -NIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA------YTVSKHA 174
             +I  N     L     A+        C  S  S+ +L   +          Y + KHA
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200
Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLV 234
           +VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D                
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW-------------- 241
Query: 235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 242 RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 109/288 (37%), Gaps = 47/288 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           +E   A+VTG A+ IG A      + G +VV                       T + C 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 73  VSL------EQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFDN 122
             L          + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 123 IIRINVRGAA---LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHA------YT 169
              I     A   L M +A      R+ G    C  S  S+ +L   +          Y 
Sbjct: 141 AELIGTNAIAPFLLTMSFAQ-----RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 195
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
           + KHA+VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D           
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW--------- 241
Query: 230 XXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 242 -----RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 112/279 (40%), Gaps = 39/279 (13%)
Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY 68
           A   L+GK+A+VTG +RGIG A  +     GA V                         +
Sbjct: 1   ANSXLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60
Query: 69  --------LH----CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD 116
                   LH       SL+ ++QN    T     + DIL NNAG+       ++   F 
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGST-----KFDILINNAGIGPGAFIEETTEQF- 114
Query: 117 ANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV 176
              FD  + +N +     ++ A   +  R +  II+ +S A+ +      AY+ +K AI 
Sbjct: 115 ---FDRXVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSXTKGAIN 169
Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRG 236
             T   A +LG  GI VN I P  V T        + E   D   P              
Sbjct: 170 TXTFTLAKQLGARGITVNAILPGFVKTDX------NAELLSD---PXXKQYATTISAFNR 220
Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           L  ++       DIA+ A +LAS +S++++G  + V GG
Sbjct: 221 LGEVE-------DIADTAAFLASPDSRWVTGQLIDVSGG 252

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXX 60
           M     + A      +  +VTGG RGIG A  +     G KV                  
Sbjct: 21  MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA--------- 71
Query: 61  XXXPLVTY-LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
              P   + +  DV+    +           G +++L +NAG+    S    +      +
Sbjct: 72  ---PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL----SADAFLMRMTEEK 124
Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGL 178
           F+ +I  N+ GA    + A++ M   + G +I  ASV+ L G +G  A Y  SK  ++G+
Sbjct: 125 FEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLWG-IGNQANYAASKAGVIGM 183
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
            ++ A EL K  +  N ++P  + T M     ++ ++ +  G                  
Sbjct: 184 ARSIARELSKANVTANVVAPGYIDTDMT----RALDERIQQGA----------------- 222
Query: 239 NLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGGF 276
            L+ +  K      ++A    +LAS+++ YISG  + VDGG 
Sbjct: 223 -LQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 263

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 20/197 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXX-----------XXXXXXXXXXXXXXX 61
            +G++ +VTG   G+G A    F + GA VV                             
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 62  XXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFD 121
              +  Y   +       + L+   +   GR+D++ NNAG+L    + +S +     ++D
Sbjct: 67  GKAVANYDSVEAG-----EKLVKTALDTFGRIDVVVNNAGIL----RDRSFSRISDEDWD 117
Query: 122 NIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKN 181
            I R+++RG+    + A      +  G II TAS + + G  G   Y+ +K  ++GL   
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANT 177
Query: 182 TACELGKYGIRVNCISP 198
              E  K  I  N I+P
Sbjct: 178 LVIEGRKNNIHCNTIAP 194

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 14/193 (7%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           K+ ++TG + GIGEA  R F + G  ++                    P       DV+ 
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL------PNTLCAQVDVTD 70
Query: 76  EQDIQNLINVTISKHGRLDILFNNAG--VLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           +      I      +G  D + NNAG  +LG       I   +ANE+  +  +NV G   
Sbjct: 71  KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ------IDTQEANEWQRMFDVNVLGLLN 124
Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           GM+     M  R  G II+ +S+A         AY  +K A+  +++N   E+    +RV
Sbjct: 125 GMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRV 184
Query: 194 NCISPFGVATSML 206
             I+P  V T +L
Sbjct: 185 MTIAPSAVKTELL 197

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 45/282 (15%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXX 60
           M     + A      +  +VTGG RGIG A  +     G KV                  
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA--------- 51
Query: 61  XXXPLVTY-LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
              P   + + CDV+    +           G +++L +NAG+    S    +      +
Sbjct: 52  ---PKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL----SADAFLMRMTEEK 104
Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGL 178
           F+ +I  N+ GA    + A++ M   + G +I   SV+   G +G  A Y  SK  ++G+
Sbjct: 105 FEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWG-IGNQANYAASKAGVIGM 163
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
            ++ A EL K  +  N ++P  + T M     ++ ++ +  G                  
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDMT----RALDERIQQGA----------------- 202
Query: 239 NLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGGF 276
            L+ +  K      ++A    +LAS+++ YISG  + VDGG 
Sbjct: 203 -LQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 104/273 (38%), Gaps = 29/273 (10%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPL---V 66
           Y  L+ K+ ++ GG + +G  T + F      +V                         V
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKV 65
Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITDFDANEFDNIIR 125
                D+S E+++  L +    + G++DI  N  G VL      K I +    EFD +  
Sbjct: 66  ALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-----KKPIVETSEAEFDAMDT 120
Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           IN + A   +K AAK M P      I+T+ +A+  G      Y  +K  +   T+  + E
Sbjct: 121 INNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYS--TYAGNKAPVEHYTRAASKE 178
Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTL 245
           L K  I VN I+P  + TS               G+              G         
Sbjct: 179 LMKQQISVNAIAPGPMDTSFFY------------GQETKESTAFHKSQAMG-----NQLT 221
Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
           K  DIA    +L +D   +I+G  +  +GG+TT
Sbjct: 222 KIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXXXXXXXXPLVTYL 69
           L  +I +VTG + GIG      + ++GA V+                       P    L
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ Q L    +  + RLD + +NAG+LG+      +++ +   + ++++INV 
Sbjct: 68  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVC---PMSEQNPQVWQDVMQINVN 124
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              +  +    +++   +G ++ T+S     G     AY  SK A  G+ +  A E  + 
Sbjct: 125 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR 184
Query: 190 GIRVNCISPFGVATSMLVNAWKSCED 215
            +RVNCI+P G  T+M  +A+ + ED
Sbjct: 185 -LRVNCINPGGTRTAMRASAFPT-ED 208

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 6/192 (3%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSL 75
           + A VTG + GIG A  R     G  V                       V    CDV+ 
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS 84
Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             ++   +   + + G + IL N+AG  G         D D   + +++  N+ G     
Sbjct: 85  TDEVHAAVAAAVERFGPIGILVNSAGRNGG----GETADLDDALWADVLDTNLTGVFRVT 140
Query: 136 KYAAKVMVPRRSGC--IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           +   +    R +G   I++ AS     G +    YT SKH +VG TK+   EL K GI V
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV 200
Query: 194 NCISPFGVATSM 205
           N + P  V T M
Sbjct: 201 NAVCPGYVETPM 212

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 45/282 (15%)
Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXX 60
           M     + A      +  +VTGG RGIG A  +     G KV                  
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA--------- 51
Query: 61  XXXPLVTY-LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
              P   + +  DV+    +           G +++L +NAG+    S    +      +
Sbjct: 52  ---PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL----SADAFLMRMTEEK 104
Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGL 178
           F+ +I  N+ GA    + A++ M   + G +I   SV+ L G +G  A Y  SK  ++G+
Sbjct: 105 FEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-IGNQANYAASKAGVIGM 163
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLA 238
            ++ A EL K  +  N ++P  + T M     ++ ++ +  G                  
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDMT----RALDERIQQGA----------------- 202
Query: 239 NLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGGF 276
            L+ +  K      ++A    +LAS+++ YISG  + VDGG 
Sbjct: 203 -LQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 106/265 (40%), Gaps = 22/265 (8%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           L  K+A +TGG  GIG     +F++HG   V+                         L  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV     +   ++  + + GR+DIL N A   GN         F  N F  ++ I+  G 
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAA--GNFLCPAGALSF--NAFKTVMDIDTSGT 140
Query: 132 ALGMKYAAKVMVPRRSGCIIS-TASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               +   +       G I++ TA++ +    L  HA + +K A+  +T++ A E G   
Sbjct: 141 FNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGPQN 199
Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDI 250
           IRVN ++P  ++ +         E     G P              L  L   T    +I
Sbjct: 200 IRVNSLAPGPISGT---------EGLRRLGGP--QASLSTKVTASPLQRLGNKT----EI 244
Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A + LYLAS  + Y++G  LV DGG
Sbjct: 245 AHSVLYLASPLASYVTGAVLVADGG 269

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 102/269 (37%), Gaps = 31/269 (11%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH-CDVS 74
           K  IVTGG RGIG A  R     GA V                      + T  + CDVS
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 74
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
               +   I    +  G +  L  NAGV    S  K  T+    +F  +  +NV G    
Sbjct: 75  NTDIVTKTIQQIDADLGPISGLIANAGV----SVVKPATELTHEDFAFVYDVNVFGVFNT 130
Query: 135 MKYAAKVMVPRRS-GCIISTASVAS-------LMGGLGPHAYTVSKHAIVGLTKNTACEL 186
            +  AK+ + ++  G I+ T+S++S       L G L    Y  SK A   L K  A E 
Sbjct: 131 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW 190
Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLK 246
              GIRVN +SP  V T    +  K   D   S  P                       +
Sbjct: 191 ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFA------------------Q 232
Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGG 275
             ++   A+ L SD + Y++G    +DGG
Sbjct: 233 PEEMTGQAILLLSDHATYMTGGEYFIDGG 261

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 111/288 (38%), Gaps = 47/288 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL--H 70
           +E   A+VTG A+ IG A      + G +VV                       T +   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 71  CDVS----LEQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFDN 122
            D++    L    + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 123 IIRINVRGAA---LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHA------YT 169
              I     A   L M +A      R+ G    C  S  S+ +L   +          Y 
Sbjct: 121 AELIGTNAIAPFLLTMSFAQ-----RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 175
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
           + KHA+VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D           
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW--------- 221
Query: 230 XXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 222 -----RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 111/288 (38%), Gaps = 47/288 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL--H 70
           +E   A+VTG A+ IG A      + G +VV                       T +   
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 71  CDVS----LEQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFDN 122
            D++    L    + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 123 IIRINVRGAA---LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHA------YT 169
              I     A   L M +A      R+ G    C  S  S+ +L   +          Y 
Sbjct: 141 AELIGTNAIAPFLLTMSFAQ-----RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 195
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
           + KHA+VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D           
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW--------- 241
Query: 230 XXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 242 -----RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 111/288 (38%), Gaps = 47/288 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL--H 70
           +E   A+VTG A+ IG A      + G +VV                       T +   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 71  CDVS----LEQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFDN 122
            D++    L    + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 123 IIRINVRGAA---LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHA------YT 169
              I     A   L M +A      R+ G    C  S  S+ +L   +          Y 
Sbjct: 121 AELIGTNAIAPFLLTMSFAQ-----RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 175
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
           + KHA+VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D           
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW--------- 221
Query: 230 XXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 222 -----RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 111/288 (38%), Gaps = 47/288 (16%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL--H 70
           +E   A+VTG A+ IG A      + G +VV                       T +   
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 71  CDVS----LEQDIQNLINVTISKHGRLDILFNNAGVLGN----QSKHKSITDFDANEFDN 122
            D++    L    + +IN      GR D+L NNA         Q  H+  ++    E   
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 123 IIRINVRGAA---LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHA------YT 169
              I     A   L M +A      R+ G    C  S  S+ +L   +          Y 
Sbjct: 141 AELIGTNAIAPFLLTMSFAQ-----RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 195
Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXX 229
           + KHA+VGLT++ A EL  YGIRVN ++P     S+L  A    E+  D           
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMG--EEEKDKW--------- 241
Query: 230 XXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                R    L      A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 242 -----RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           K  EG  AIV+GGA G+GEATVR     G  VV                      V+   
Sbjct: 26  KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVS--- 82
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSK--HKSITDFDANEFDNIIRINV 128
            +V+ E  +   I    ++ GRL       G  G   +   +  +  D   F   I + +
Sbjct: 83  TNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141
Query: 129 RGAALGMKYAAKVMV---PRRSG---CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
            G     +  A  +    PR +G    ++ TAS+A   G +G  AY  +K  ++GLT   
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAA 201
Query: 183 ACELGKYGIRVNCISPFGVATSML 206
           A +L   GIRVN I+P  + T ++
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKTPIM 225

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+    ++ L   T+ K GR+D+LFNNA   G  +      D    ++  ++  N+
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNA---GTGAPAIPXEDLTFAQWKQVVDTNL 135
Query: 129 RGAALGMKYAAKVMVPR--RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
            G  L  + A +V   +  R G II+  S+++         YT +KHAI GLTK+T+ +
Sbjct: 136 TGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 8/214 (3%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXXXXXXXXPLVTYL 69
           L  +I +VTG + GIG      + ++GA V+                       P    L
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ Q L       + RLD + +NAG+LG+      +++ +   + +++++NV 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVC---PMSEQNPQVWQDVMQVNVN 126
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              +  +    +++   +G ++ T+S     G     AY  SK A  G+ +  A E  + 
Sbjct: 127 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR 186
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPC 223
            +RVNCI+P G  T+M  +A+ + ED      P 
Sbjct: 187 -LRVNCINPGGTRTAMRASAFPT-EDPQKLKTPA 218

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV------LGNQSKHKSITDFDANEFD 121
           Y+  DV+ E+D++  +     +   L  + + AGV      LG +  H          F 
Sbjct: 43  YVEGDVTREEDVRRAV-ARAQEEAPLFAVVSAAGVGLAEKILGKEGPH------GLESFR 95
Query: 122 NIIRINVRGAALGMKYAAKVM------VPRRSGCIISTASVASLMGGLGPHAYTVSKHAI 175
            ++ +N+ G    ++ AA  M         + G I++TASVA+  G +G  AY  SK  +
Sbjct: 96  RVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV 155
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSML 206
           V LT   A EL  +GIRV  ++P    T +L
Sbjct: 156 VALTLPAARELAGWGIRVVTVAPGLFDTPLL 186

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 101/262 (38%), Gaps = 23/262 (8%)
Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL-HCDVS 74
           +IA VTGG  GIG +  +   K G +VV                        Y    +V 
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVG 73
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
                +   +   ++ G +D+L NNAG+    ++          ++  +I  N+      
Sbjct: 74  DWDSTKQAFDKVKAEVGEIDVLVNNAGI----TRDVVFRKMTREDWQAVIDTNLTSLFNV 129
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            K     MV R  G II+ +SV    G  G   Y+ +K  I G T + A E+   G+ VN
Sbjct: 130 TKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVN 189
Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAA 254
            +SP  + T M+            + +P           VR L +         +I    
Sbjct: 190 TVSPGYIGTDMV-----------KAIRPDVLEKIVATIPVRRLGS-------PDEIGSIV 231
Query: 255 LYLASDESKYISGHNLVVDGGF 276
            +LAS+ES + +G +  ++GG 
Sbjct: 232 AWLASEESGFSTGADFSLNGGL 253

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 7/214 (3%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXXXXXXXXPLVTYL 69
           L+ +I +VTG + GIG      + ++GA V+                       P    L
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ + + +   + + RLD + +NAG+LG   +    ++ D   + ++ ++NV 
Sbjct: 73  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLG---EIGPXSEQDPQIWQDVXQVNVN 129
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 +    +++   +G ++ T+S     G     AY  SK A  G  +  A E    
Sbjct: 130 ATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNR 189
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPC 223
            +RVNCI+P G  TS   +A+ + ED      P 
Sbjct: 190 SLRVNCINPGGTRTSXRASAFPT-EDPQKLKTPA 222

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 91  GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCI 150
           GRLDI+ NNAGV+ ++ +    TD D   +   + +NV       + A  +      G I
Sbjct: 93  GRLDIVVNNAGVI-SRGRITETTDAD---WSLSLGVNVEAPFRICRAAIPLXAAAGGGAI 148
Query: 151 ISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAW 210
           ++ AS   L  G G   Y ++K A+  LT+    +    GIR+N + P  V T  L   +
Sbjct: 149 VNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGF 208
Query: 211 KSCEDCMDSGKPCXXXXXXXXXLVRGLANLK-----GVTLKARDIAEAALYLASDESKYI 265
                  D                R +A L      G   +  DIA+  L+LASD ++Y+
Sbjct: 209 AKRGFDPD----------------RAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYL 252
Query: 266 SGHNLVVDGG 275
            G  + V+GG
Sbjct: 253 CGSLVEVNGG 262

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 80/210 (38%), Gaps = 15/210 (7%)
Query: 17  IAIVTGGARGIGEATVRLFVKHGAK-------VVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           I ++TG  +GIG A    F +           +V                     L   +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             D+S   D++ L    + ++G +D L NNAGV     +  +++D    +FD  +  N++
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGV----GRFGALSDLTEEDFDYTMNTNLK 119
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G     +    +M  + SG I    SVA+         Y +SK    GL +       K 
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC 179
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDS 219
            +R+  + P  V T M    W   +D M +
Sbjct: 180 NVRITDVQPGAVYTPM----WGKVDDEMQA 205

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 65  LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
           +V  + CDV     +  L     ++  RLD+L NNAG   +      + +    +++ I+
Sbjct: 84  IVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAG---SNVPPVPLEEVTFEQWNGIV 140
Query: 125 RINVRGAALGMKYA---AKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKN 181
             N+ GA L  ++A    K   PR  G II+  S+++         YT +KHAI GLTK+
Sbjct: 141 AANLTGAFLCTQHAFRXXKAQTPR-GGRIINNGSISAQTPRPNSAPYTATKHAITGLTKS 199
Query: 182 TACE 185
           TA +
Sbjct: 200 TALD 203

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 115/278 (41%), Gaps = 25/278 (8%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXP--LVT 67
           +  L+GK A+VTG   GIG+A     V  GA V+                    P  ++ 
Sbjct: 5   HXQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQ 64
Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFD--NIIR 125
            +  D+  EQ  Q++I     K+ ++DIL NN G+       + +  FD  + D   +  
Sbjct: 65  PVVADLGTEQGCQDVIE----KYPKVDILINNLGIF------EPVEYFDIPDEDWFKLFE 114
Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           +N+       +   K  + R+ G +I  AS A++        Y+ +K   + L+++ A  
Sbjct: 115 VNIXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAEL 174
Query: 186 LGKYGIRVNCISPFGVAT----SMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK 241
                + VN I P    T    + L + + + +  ++  +           +++ L    
Sbjct: 175 TTGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRL---- 230
Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
              ++  +IA    +L+S  S  I+G  L +DGG   S
Sbjct: 231 ---IRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 48/265 (18%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQD 78
           +V   +RGIG A   +  + GA+V                         Y+ CD  L +D
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH---------RYVVCD--LRKD 71
Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKH-KSITDFDANE-----FDNIIRINVRGAA 132
           +    ++   K   +DIL  NAG  G ++     +T+ D  E     F N+I+I VR   
Sbjct: 72  L----DLLFEKVKEVDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMIKI-VRNYL 124
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             MK        +  G I++  S + +      +    ++ A+ G  K  + E+  YGI 
Sbjct: 125 PAMK-------EKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 177
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           VNC++P           W   E   +               +R +A       K  +IA 
Sbjct: 178 VNCVAP----------GWTETERVKELLSEEKKKQVESQIPMRRMA-------KPEEIAS 220
Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
              +L S+++ Y++G  +VVDGG +
Sbjct: 221 VVAFLCSEKASYLTGQTIVVDGGLS 245

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXXXXXXXXPLVTYL 69
           L  +I +VTG + GIG      + ++GA V+                       P    L
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ Q L       + RLD + +NAG+LG+       ++ +   + ++ ++NV 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVC---PXSEQNPQVWQDVXQVNVN 126
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 +    +++   +G ++ T+S     G     AY  SK A  G  +  A E  + 
Sbjct: 127 ATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR 186
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPC 223
            +RVNCI+P G  T+M  +A+ + ED      P 
Sbjct: 187 -LRVNCINPGGTRTAMRASAFPT-EDPQKLKTPA 218

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 13/206 (6%)
Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY--- 68
           TL GK   +TG +RGIG A      + GA V                       V     
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 69  ----LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
               L CD+  E  ++  +  T+   G +DIL NNA  +      +   D     FD   
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI----WLRGTLDTPXKRFDLXQ 118
Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPH-AYTVSKHAIVGLTKNT 182
           ++N RG+ +  +     ++   +  I++ A   SL     G H  YT++K     +T   
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGL 178
Query: 183 ACELGKYGIRVNCISPFGVATSMLVN 208
           A E G  G+ +N + P  V  +  +N
Sbjct: 179 AAEFGPQGVAINALWPRTVIATDAIN 204

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 30/280 (10%)
Query: 1   MNLNTEKKAYKTLE--GKIAIVTGGARGIGEATVRLFVKHGAKVVXX-XXXXXXXXXXXX 57
           ++L TE   +++     K+AIVTG +RGIG A        G  VV               
Sbjct: 11  VDLGTENLYFQSXXETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAG 70
Query: 58  XXXXXXPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                         DVS    ++ L        G +D+L NNAG+        +I +   
Sbjct: 71  KIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI----XPLTTIAETGD 126
Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAI 175
             FD +I +N++G    ++ AA+ +  R  G II+ ++  S +G L P    Y  +K  +
Sbjct: 127 AVFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINXST--SQVGLLHPSYGIYAAAKAGV 182
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVR 235
              T   + EL    I VN ++P   AT + +   KS E      K              
Sbjct: 183 EAXTHVLSKELRGRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAK-------------- 227
Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            LA L+ +    +DIA A  +LA  +  +++G  L  +GG
Sbjct: 228 -LAPLERLGTP-QDIAGAVAFLAGPDGAWVNGQVLRANGG 265

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV---XXXXXXXXXXXXXXXXXXXXPLVTYL 69
           L  +I +VTG + GIG      + ++GA V+                       P    L
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ Q L    +  + RLD + +NAG+LG+       ++ +   + ++ +INV 
Sbjct: 91  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVC---PXSEQNPQVWQDVXQINVN 147
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 +    +++   +G ++ T+S     G     AY  SK A  G  +  A E  + 
Sbjct: 148 ATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR 207
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPC 223
            +RVNCI+P G  T+   +A+ + ED      P 
Sbjct: 208 -LRVNCINPGGTRTAXRASAFPT-EDPQKLKTPA 239

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 28/272 (10%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           ++GK+A+VT G+ G+G A+     ++GA+++                     LV+    D
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIAS---LVSGAQVD 61
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQ---------SKHKSITDFDANEFDNI 123
           +         +   I + G +D LF  A  LG            +     +    ++D  
Sbjct: 62  I---------VAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDES 112
Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
            R+  R A    + AA+ MV +  G ++   SV  L          + +  ++G+ +  A
Sbjct: 113 YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLA 172
Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGV 243
            EL  +G+ VN + P  + T  + +   + E    SG             +       G 
Sbjct: 173 LELAPHGVTVNAVLPSLILTDRVRSL--AEERARRSGITVEEALKSMASRIP-----MGR 225
Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             K  ++A    +LAS+++ +I+G  + VDGG
Sbjct: 226 VGKPEELASVVAFLASEKASFITGAVIPVDGG 257

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 17/266 (6%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L  K+ +++G    +G    R   + GA +V                         +  D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI---IRINVR 129
           ++ +  + +L++ T+  +GR+D++ NNA       +  S+  F    F+++   I + V 
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNA------FRVPSMKPFANTTFEHMRDAIELTVF 122
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           GA L +       +    G +++  S+          AY ++K A++ +++  A ELG+ 
Sbjct: 123 GA-LRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEK 181
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARD 249
           GIRVN + P  +    L + ++       +GK              G ++LK +  +  +
Sbjct: 182 GIRVNSVLPGYIWGGTLKSYFEH-----QAGKYGTSVEDIYNAAAAG-SDLKRLPTE-DE 234
Query: 250 IAEAALYLASDESKYISGHNLVVDGG 275
           +A A L++ASD +  I+G  L V+ G
Sbjct: 235 VASAILFMASDLASGITGQALDVNCG 260

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 8/183 (4%)
Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLE 76
           I +VTG   G GE   R F++ G KV+                     +      DV   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---QLDVRNR 58
Query: 77  QDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             I+ ++    ++   +DIL NNAG+ LG +  HK+  +    +++ +I  N +G     
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVE----DWETMIDTNNKGLVYMT 114
Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +     MV R  G II+  S A      G + Y  +K  +   + N   +L    +RV  
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174
Query: 196 ISP 198
           I P
Sbjct: 175 IEP 177

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
Query: 64  PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
           PL+  L+ + +  Q  + L      + GRLD L +NA ++G ++  + + D D   F  +
Sbjct: 66  PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDED---FXQV 122
Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIIS-TASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
             +NV  A   +  A   ++ R     I+ T+S     G     AY VSK A  GL +  
Sbjct: 123 XHVNV-NATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTL 181
Query: 183 ACEL-GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
           A EL G   +R N I+P    T     A+   E+ +++  P
Sbjct: 182 ADELEGVTAVRANSINPGATRTGXRAQAYPD-ENPLNNPAP 221

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 25/264 (9%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTY-LHCDVSLEQ 77
           +V G  R IG A    F + GA VV                          +  D++   
Sbjct: 12  VVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAA 71
Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
           +++  I+    K G +  L + AG L      K+I + D   +  ++ +N+    L  K 
Sbjct: 72  EVEAAISAAADKFGEIHGLVHVAGGL---IARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128
Query: 138 AAKVMVPRRSGCIISTASVASL-MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCI 196
           A   M   + G I++ +S A    GG G  AY  SK A++  T+  A E+G   IRVN +
Sbjct: 129 ALPKMA--KGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAV 185
Query: 197 SPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAEAALY 256
            P  ++T+          D     KP           V G  +LK     + D+A    +
Sbjct: 186 CPGMISTTF--------HDTFT--KP------EVRERVAGATSLK-REGSSEDVAGLVAF 228
Query: 257 LASDESKYISGHNLVVDGGFTTSK 280
           LASD++ Y++G    ++GG   S+
Sbjct: 229 LASDDAAYVTGACYDINGGVLFSE 252

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+  + I  +    ++++GR+D+L NNAG    +++  +  +    E  ++  ++V
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAG----RTQVGAFEETTERELRDLFELHV 111
Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            G A   +        R SG +++ +S    +   G  AY+ +K A+  L++  A E+  
Sbjct: 112 FGPARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAP 171
Query: 189 YGIRVNCISPFGVATSML 206
           +GI+V  + P    T++ 
Sbjct: 172 FGIKVLIVEPGAFRTNLF 189

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 66  VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR 125
           V +L  D++     Q  ++  +++ GR+D L NNAG+           D     FD I+ 
Sbjct: 81  VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGI--ASIVRDDFLDLKPENFDTIVG 138
Query: 126 INVRGAALGMKYAAKVMV---PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           +N+RG     +   K  +    R S  II+  SV+++        Y  SK  +   ++  
Sbjct: 139 VNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGL 198
Query: 183 ACELGKYGIRVNCISP 198
           A  L + GI V  + P
Sbjct: 199 ALRLAETGIAVFEVRP 214

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 32/214 (14%)
Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITD-FDANEFDNIIRIN 127
           + CDV     +QN ++  I   G  +I+ NNA   GN     S T+    N +  I  I 
Sbjct: 81  IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA--GN---FISPTERLSPNAWKTITDIV 135
Query: 128 VRGAALGMKYAAKVMVPRRSGCI---ISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
           + G A       K ++  + G     I+T    +  G + P A   +K  +  ++K+ A 
Sbjct: 136 LNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS--AKAGVEAMSKSLAA 193
Query: 185 ELGKYGIRVNCISPFGVATS---MLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK 241
           E GKYG+R N I P  + T      ++   + E  M    PC          V  LANL 
Sbjct: 194 EWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGT-----VEELANL- 247
Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                       A +L SD + +I+G  +  DGG
Sbjct: 248 ------------AAFLCSDYASWINGAVIKFDGG 269

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 79/214 (36%), Gaps = 7/214 (3%)
Query: 8   KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVT 67
           K  K++ G+I ++TG   GIG  T   F K  +K+V                      V 
Sbjct: 24  KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVH 83
Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
               D S  +DI +      ++ G + IL NNAGV+       +       + +    +N
Sbjct: 84  TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFAT----QDPQIEKTFEVN 139
Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           V       K     M     G I++ AS A  +      AY  SK A VG  K    EL 
Sbjct: 140 VLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA 199
Query: 188 KY---GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
                G++  C+ P  V T  + N   S    ++
Sbjct: 200 ALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLE 233

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 111/298 (37%), Gaps = 49/298 (16%)
Query: 7   KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLV 66
           + +++  E   A++TGGAR IG +      + G +VV                       
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG 62
Query: 67  TYLHCD------VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
           + + C        SL    +++I+ +    GR D+L NNA           +   D N  
Sbjct: 63  SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY---YPTPLLPGDDTNGA 119
Query: 121 DNIIRINVRGAALGMKYAAKVMVP--------RRSG----------CIISTASVASLMGG 162
            +   I+ + A L   + +  + P        RR G           +++     + +  
Sbjct: 120 ADAKPIDAQVAEL---FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL 176
Query: 163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
            G   YT++KHA+ GLT+  A EL    IRVN ++P     S+L  A             
Sbjct: 177 PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAP---GLSLLPPAMPQ---------- 223
Query: 223 CXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
                       R    L      A  IA+A  +L S ++ YI+G  L VDGG   ++
Sbjct: 224 ------ETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 108/270 (40%), Gaps = 28/270 (10%)
Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLH 70
           LEGK A++TG A  R I     + F + GA++                       +  + 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV-VK 77
Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDVSL++DI+NL        G LDI+ ++      +     + D     F   + I+V  
Sbjct: 78  CDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY- 136
Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGK 188
           + + +      ++  R+G I++ +   +    + PH     ++K A+    +  A ++ K
Sbjct: 137 SLIALTRELLPLMEGRNGAIVTLSYYGA--EKVVPHYNVMGIAKAALESTVRYLAYDIAK 194
Query: 189 YGIRVNCIS--PFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLK 246
           +G R+N IS  P     +  +  +    +      P                   G  + 
Sbjct: 195 HGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF------------------GKPIT 236
Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGF 276
             D+ + A++L SD ++ I+G  + VD G+
Sbjct: 237 IEDVGDTAVFLCSDWARAITGEVVHVDNGY 266

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 113/298 (37%), Gaps = 49/298 (16%)
Query: 7   KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLV 66
           + +++  E   A++TGGAR IG +      + G +VV                       
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG 62
Query: 67  TYLHCD------VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
           + + C        SL    +++I+ +    GR D+L NNA           +   D N  
Sbjct: 63  SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY---YPTPLLPGDDTNGA 119
Query: 121 DNIIRINVRGAALGMKYAAKVMVP--------RRSG----------CIISTASVASLMGG 162
            +   I+ + A L   + +  + P        RR G           +++     + +  
Sbjct: 120 ADAKPIDAQVAEL---FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPL 176
Query: 163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
            G   YT +KHA+ GLT+  A EL    IRVN ++P G++        ++ E+       
Sbjct: 177 PGFCVYTXAKHALGGLTRAAALELAPRHIRVNAVAP-GLSLLPPAXPQETQEE------- 228
Query: 223 CXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
                       R    L      A  IA+A  +L S ++ YI+G  L VDGG   ++
Sbjct: 229 -----------YRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 27/226 (11%)
Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNN--AGVLGNQSKHKSITDFDANEFDNII 124
           TY       EQ+   LI    S  G +DIL +N  A V        ++ D+     D + 
Sbjct: 47  TYPQLIPMSEQEPVELIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYR----DMVE 102
Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
            + ++  AL    A++ M  R+SG II   S AS         Y  ++     L    + 
Sbjct: 103 ALQIKPFALANAVASQ-MKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSK 161
Query: 185 ELGKYGIRVNCISPFGVATS-----MLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLAN 239
           ELG++ I V  I+P GV +           WK+  + +                VR    
Sbjct: 162 ELGEHNIPVFAIAPNGVDSGDSPYYYPSEPWKTSPEHV--------------AWVRKYTA 207
Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           L+ +  + +++ E   +LAS    Y++G    + GGF   +   G+
Sbjct: 208 LQRLGTQ-KELGELVTFLASGSCDYLTGQVFWLAGGFPVVERWPGM 252

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 113/274 (41%), Gaps = 31/274 (11%)
Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYL 69
           +  L GK A++T G +G G ATV LF++ GA+V+                    P   ++
Sbjct: 6   FLNLRGKRALITAGTKGAGAATVSLFLELGAQVL----------TTARARPEGLPEELFV 55
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             D++ ++    +   T  + G +D++ +   + G+ +     +    +++ N + +N+ 
Sbjct: 56  EADLTTKEGCAIVAEATRQRLGGVDVIVHX--LGGSSAAGGGFSALSDDDWYNELSLNLF 113
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL---TKNTACEL 186
            A    +      V R SG ++   S+  ++    P + T    A   L   +K  + E+
Sbjct: 114 AAVRLDRQLVPDXVARGSGVVVHVTSIQRVLP--LPESTTAYAAAKAALSTYSKAXSKEV 171
Query: 187 GKYGIRVNCISPFGVATSMLV----NAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLK- 241
              G+RV  +SP  + T   V       K     ++ GK           +  GL  +  
Sbjct: 172 SPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGK---------KIIXDGLGGIPL 222
Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           G   K  ++A    +LASD +  I+G    +DGG
Sbjct: 223 GRPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74  SLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           +L+ D+++  +V  ++     GR+D+L  NAG LG     +++ +   +   +++ +NV 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAG-LGLLGPLEALGE---DAVASVLEVNVV 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
           G+ ++ I    V T+ +     S E+ +D
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
           LG   YT++K A+ GLT++ A EL    IRVN +SP G++       +   ED       
Sbjct: 190 LGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSP-GLSVLPDDMPFSVQED------- 241
Query: 223 CXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
                       R    L      A ++++  ++L S ++KYI+G  + VDGG++ ++
Sbjct: 242 -----------YRRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSLTR 288

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 13/185 (7%)
Query: 19  IVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVSLEQD 78
            +TG   G GEA  R F + G  +V                      V  L  DV     
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT-RVLPLTLDVRDRAA 83
Query: 79  IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYA 138
               ++    +   L  L NNAG+       +S    D +++D  +  N++G    + Y+
Sbjct: 84  XSAAVDNLPEEFATLRGLINNAGLALGTDPAQSC---DLDDWDTXVDTNIKG----LLYS 136
Query: 139 AKVMVPR-----RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
            ++++PR         I++  SVA      G H Y  +K  +   + N  C+L   G+RV
Sbjct: 137 TRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV 196
Query: 194 NCISP 198
             + P
Sbjct: 197 TNLEP 201

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74  SLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           +L+ D+++  +V  ++     GR+D+L  NAG LG     +++ +   +   +++ +NV 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAG-LGLLGPLEALGE---DAVASVLDVNVV 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
           G+ ++ I    V T+ +     S E+ +D
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 86/235 (36%), Gaps = 45/235 (19%)
Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
           TY       EQ+   LI    S +G++D+L +N              D  A EF  I + 
Sbjct: 47  TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN--------------DIFAPEFQPIDKY 92
Query: 127 NV---RGA--ALGMKYAAKV------MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI 175
            V   RGA  AL ++  A V      M  R+SG II   S            YT ++   
Sbjct: 93  AVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA 152
Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVR 235
             L    + ELG+Y I V  I P           +   ED      P             
Sbjct: 153 CTLANALSKELGEYNIPVFAIGP----------NYLHSEDS-----PYFYPTEPWKTNPE 197
Query: 236 GLANLKGVTLKAR-----DIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
            +A++K VT   R     ++ E   +LAS    Y++G    + GGF   +   G+
Sbjct: 198 HVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPMIERWPGM 252

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74  SLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           +L+ D+++  +V  ++     GR+D+L  NAG LG     +++ +   +   +++ +NV 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAG-LGLLGPLEALGE---DAVASVLDVNVV 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
           G+ ++ I    V T+ +     S E+ +D
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXX-----XXXXXXXXPLVTYLHC 71
           +AI+TG ++GIG          G +VV                         P+V  L  
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
               + D +  I     K+G +DIL N A    + S  + +     + F  I  INV   
Sbjct: 69  TDCTKADTE--IKDIHQKYGAVDILVNAAAXFXDGSLSEPV-----DNFRKIXEINVIAQ 121
Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +K   ++   +++G I + AS A+  G      Y  +K A++GL ++   EL   GI
Sbjct: 122 YGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 192 RVNCISPFGVATSMLVNAWKSCED 215
           RV  + P  V T     A    +D
Sbjct: 182 RVTTLCPGWVNTDXAKKAGTPFKD 205

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 19/264 (7%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           L G+ A+VTG +RGIG A        GA V+                         L  D
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S      +LI         +DIL  NA    N     +++    N+    + +N+    
Sbjct: 91  LSEAGAGTDLIE-RAEAIAPVDILVINASAQIN----ATLSALTPNDLAFQLAVNLGSTV 145
Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             ++ A   MV R+ G ++S  S+  L       AY  +K A   L ++ A +     + 
Sbjct: 146 DMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVL 205
Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKARDIAE 252
           +N ++P  V T    NA +  +D     +            VR L N  G   +  ++  
Sbjct: 206 LNTLAPGLVDTDR--NADRRAQDPEGWDE-----------YVRTL-NWMGRAGRPEEMVG 251
Query: 253 AALYLASDESKYISGHNLVVDGGF 276
           AAL+LAS+   +++G  + + GG+
Sbjct: 252 AALFLASEACSFMTGETIFLTGGY 275

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74  SLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           +L+ D+++  +V  ++     GR+D+L  NAG LG     +++ +   +   +++ +NV 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAG-LGLLGPLEALGE---DAVASVLDVNVV 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
           G+ ++ I    V T+ +     S E+ +D
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74  SLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           +L+ D+++  +V  ++     GR+D+L  NAG LG     +++ +   +   +++ +NV 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAG-LGLLGPLEALGE---DAVASVLDVNVV 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
           G+ ++ I    V T+ +     S E+ +D
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74  SLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           +L+ D+++  +V  ++     GR+D+L  NAG LG     +++ +   +   +++ +NV 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAG-LGLLGPLEALGE---DAVASVLDVNVV 116
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMD 218
           G+ ++ I    V T+ +     S E+ +D
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVL-------GNQSKHKS-ITDFDANEFDNII 124
           V+L      L+    +  GR D+L NNA           ++  H+  + D +A E     
Sbjct: 102 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME---TA 158
Query: 125 RINVRGA-ALGMKYAAKVMVPRRSGC----------IISTASVASLMGGLGPHAYTVSKH 173
             ++ G+ A+   +  K    R +G           II+     +    LG   YT++K 
Sbjct: 159 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 218
Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXL 233
           A+ GLT++ A EL    IRVN + P     S+LV          D   P           
Sbjct: 219 ALEGLTRSAALELAPLQIRVNGVGP---GLSVLV----------DDMPPAVWEGH----- 260
Query: 234 VRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
            R    L      A ++++  ++L S ++KYI+G  + VDGG++ ++
Sbjct: 261 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 306

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVL-------GNQSKHKS-ITDFDANEFDNII 124
           V+L      L+    +  GR D+L NNA           ++  H+  + D +A E     
Sbjct: 86  VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME---TA 142
Query: 125 RINVRGA-ALGMKYAAKVMVPRRSG----------CIISTASVASLMGGLGPHAYTVSKH 173
             ++ G+ A+   +  K    R +G           II+     +    LG   YT++K 
Sbjct: 143 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 202
Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXL 233
           A+ GLT++ A EL    IRVN + P     S+LV          D   P           
Sbjct: 203 ALEGLTRSAALELAPLQIRVNGVGP---GLSVLV----------DDMPPAVWEGH----- 244
Query: 234 VRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
            R    L      A ++++  ++L S ++KYI+G  + VDGG++ ++
Sbjct: 245 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVL-------GNQSKHKS-ITDFDANEFDNII 124
           V+L      L+    +  GR D+L NNA           ++  H+  + D +A E     
Sbjct: 83  VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME---TA 139
Query: 125 RINVRGA-ALGMKYAAKVMVPRRSGC----------IISTASVASLMGGLGPHAYTVSKH 173
             ++ G+ A+   +  K    R +G           II+     +    LG   YT++K 
Sbjct: 140 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG 199
Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXL 233
           A+ GLT++ A EL    IRVN + P     S+LV          D   P           
Sbjct: 200 ALEGLTRSAALELAPLQIRVNGVGP---GLSVLV----------DDMPPAVWEGH----- 241
Query: 234 VRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
            R    L      A ++++  ++L S ++KYI+G  + VDGG++ ++
Sbjct: 242 -RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 287

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 22/209 (10%)
Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
           HCDVS    I  + N    K G+LD L +  G    +       D   + F     I+V 
Sbjct: 70  HCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 K A K+      G I++     +       +   V+K A+    K  A +LG  
Sbjct: 130 SLTALTKRAEKLX--SDGGSILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLGPK 187
Query: 190 GIRVNCIS--PFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLANLKGVTLKA 247
            IRVN IS  P     +  +  ++      +   P                     T+  
Sbjct: 188 HIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRR------------------TVTI 229
Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
            ++ ++ALYL SD S+ ++G    VD G+
Sbjct: 230 EEVGDSALYLLSDLSRSVTGEVHHVDSGY 258

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
           LG   YT++K A+ GLT++ A EL    IRVN + P     S+LV          D   P
Sbjct: 229 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP---GLSVLV----------DDMPP 275
Query: 223 CXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
                       R    L      A ++++  ++L S ++KYI+G  + VDGG++ ++
Sbjct: 276 AVWEGH------RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHG-AKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHC 71
           LE K+A++TG +RGIGEA  R   + G A  +                      V Y H 
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL 81
Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGV 102
           DVS  + ++      + + G +D++  NAG+
Sbjct: 82  DVSKAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 14/217 (6%)
Query: 7   KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHG---AKVVXXXXXXXXXXXXXXXXXXXX 63
           +KA + L  K  ++TG + GIG+AT   +++      K++                    
Sbjct: 25  RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF 84
Query: 64  P--LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITDFDANEF 120
           P   V     D++  + I+  I     +   +DIL NNAG  LG+    +  T+   + F
Sbjct: 85  PNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVF 144
Query: 121 DNIIR--INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           D  +   IN+  A L +  A      + SG I++  S+A          Y  SK A+   
Sbjct: 145 DTNVTALINITQAVLPIFQA------KNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAF 198
Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCED 215
           T +   EL    IRV  I+P  V T   +  ++  E+
Sbjct: 199 TDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEE 235

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 21/119 (17%)
Query: 163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISP-FGVATSMLVNAWKSCEDCMDSGK 221
           LG   YT++K A+ GLT++ A EL    IRVN + P   V    +  A +  ED      
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPPAVR--ED------ 240
Query: 222 PCXXXXXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
                        R    L      A ++++  ++L S ++KY++G  + VDGG++ ++
Sbjct: 241 ------------YRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYSLTR 287

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 100/278 (35%), Gaps = 25/278 (8%)
Query: 8   KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVT 67
           K Y   E  +A+VTGG+ GIG ATV L ++ GA V                     P   
Sbjct: 2   KPYDLSEA-VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR 60
Query: 68  YLH--CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR 125
                CDV     ++          G   IL NNAG  G  S     TD   +E   +  
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQ-GRVSTFAETTDEAWSEELQLKF 119
Query: 126 INVRGAALGMKYAAKVMVP----RRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLT 179
            +V        +  +  +P    R    I+   S+  L     PH  A + ++  +  L 
Sbjct: 120 FSV-------IHPVRAFLPQLESRADAAIVCVNSL--LASQPEPHMVATSAARAGVKNLV 170
Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXXXXXXXXLVRGLAN 239
           ++ A E    G+RVN I         LV + +         +           L R    
Sbjct: 171 RSMAFEFAPKGVRVNGI------LIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI 224
Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             G   K  + A A L+LAS  S Y +G ++ V GG +
Sbjct: 225 PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCDVS 74
           GK+ +VTG +RGIG++ V +        V                        Y+  D++
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFF-YVVGDIT 60
Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            +  ++ L+N  +  HG++D L  NAGVL      +++ + D N +  +  IN   + + 
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVL---EPVQNVNEIDVNAWKKLYDINFF-SIVS 116
Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           +   A   + + +G ++  +S A  M      AY  SK A+       A E  +  ++  
Sbjct: 117 LVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174
Query: 195 CISPFGVATSMLVN 208
            ++P  V T M VN
Sbjct: 175 AVAPGIVDTDMQVN 188

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCXXX 226
           AY  SK+A+  L +    +    G+R+N ++P  V T +L  A K+     +S +     
Sbjct: 152 AYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL-QASKADPRYGESTR----- 205
Query: 227 XXXXXXLVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                   R +A L G   + R++AEA  +L   ++ +I G  L VDGG 
Sbjct: 206 --------RFVAPL-GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 14  EGKIAIVTGGARGIGEATVRLFVKHG-AKVVXXXXXXXXXXXXXXXXXXXXPLVTYLHCD 72
           E K+A++TG +RGIGEA  R   + G A  +                      V Y H D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60
Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV 102
           VS  + ++      + + G +D++  NAG+
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGL 90

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	285
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-132
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-108
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-101
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-99
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-99
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	9e-97
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	9e-97
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-95
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	5e-95
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-94
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-91
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-90
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	5e-90
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-90
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-88
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-88
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	9e-86
4e4y_A	244	Short chain dehydrogenase family protein; structur	9e-86
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-85
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-84
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-84
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-84
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-83
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-82
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-82
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-82
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-81
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-81
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-81
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-81
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-80
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-79
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-79
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-79
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-77
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	6e-77
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	8e-77
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-76
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-76
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-76
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-75
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-75
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-75
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-75
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	4e-75
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-74
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-74
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-74
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-74
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-74
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-74
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	6e-74
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	9e-74
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-74
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-73
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-73
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	7e-73
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	8e-73
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-72
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-71
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-71
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-71
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-70
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	6e-70
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-69
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-69
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-68
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-68
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-68
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-68
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	6e-68
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-68
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	9e-68
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-67
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-67
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-67
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-67
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-67
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	8e-67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-66
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-66
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-66
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-64
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-64
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-64
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-63
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-63
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-63
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	4e-63
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	5e-63
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-62
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-62
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-62
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	5e-62
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	9e-62
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-61
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-61
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-61
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-61
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	9e-61
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-60
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-60
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-60
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-60
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-60
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	8e-60
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-59
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-59
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-59
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-59
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-59
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-58
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-58
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-58
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-58
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	6e-58
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-57
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	7e-57
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-56
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-56
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-56
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-56
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-56
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	7e-56
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	7e-56
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-55
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-55
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	7e-55
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-55
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-54
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-54
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-54
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-53
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-53
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-52
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-52
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	4e-52
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-52
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-52
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	7e-52
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	8e-52
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-51
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-51
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-51
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-51
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-51
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-50
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-49
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-49
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-48
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-47
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-47
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	6e-47
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-45
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-43
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-43
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-42
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	5e-42
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-41
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-41
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	9e-39
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-37
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-36
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	7e-36
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-35
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-35
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-31
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-29
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-28
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-27
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	9e-27
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-26
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-24
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-13
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-13
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-13
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-13
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-12
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	9e-12
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-11
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-11
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-11
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-11
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-11
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	4e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	5e-11
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	4e-08
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	3e-07
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-06
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	5e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-04
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	1e-04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	6e-04
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	8e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  375 bits (966), Expect = e-132
 Identities = 125/269 (46%), Positives = 183/269 (68%), Gaps = 17/269 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K+AI+TGGA GIGE T +LFV++GAKVVIADI D  G  + ++ + S  +++++HCD
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN-IGSPDVISFVHCD 72

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ ++D++NL++ TI+KHG+LDI+F N GVL   +   SI +    +F  ++ INV GA 
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS--TTPYSILEAGNEDFKRVMDINVYGAF 130

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLG-PHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  K+AA+VM+P + G I+ TAS++S   G G  H YT +KHA++GLT +   ELG+YGI
Sbjct: 131 LVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 190

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVNC+SP+ VA+ +L + +               +  ++EEL    ANLKG  L+A D+A
Sbjct: 191 RVNCVSPYIVASPLLTDVF-------------GVDSSRVEELAHQAANLKGTLLRAEDVA 237

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTSK 280
           +A  YLA DESKY+SG NLV+DGG+T + 
Sbjct: 238 DAVAYLAGDESKYVSGLNLVIDGGYTRTN 266

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  312 bits (802), Expect = e-108
 Identities = 94/265 (35%), Positives = 134/265 (50%), Gaps = 30/265 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+A+V+GGARG+G + VR  V  GAKVV  DI D  G A+A  L   +    Y+H D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+     +  ++  ++  G L +L NNAG+L       +I D+   E+  I+ +N+ G  
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI----GTIEDYALTEWQRILDVNLTGVF 117

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG++   K M     G II+ +S+  L G +  H YT +K A+ GLTK+TA ELG  GIR
Sbjct: 118 LGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN I P  V T M                      + + E +       G   +  +++ 
Sbjct: 178 VNSIHPGLVKTPMT---------------------DWVPEDIF--QTALGRAAEPVEVSN 214

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
             +YLASDES Y +G   VVDGG  
Sbjct: 215 LVVYLASDESSYSTGAEFVVDGGTV 239

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  295 bits (758), Expect = e-101
 Identities = 85/267 (31%), Positives = 123/267 (46%), Gaps = 23/267 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+A+VTGGA G+G   V+L +  GAKV  +DI++AAG  LA  L        ++  D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS E D   ++     + G L++L NNAG+L        +      +F  +++IN     
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP----GDMETGRLEDFSRLLKINTESVF 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK--YG 190
           +G +     M     G II+ ASV+S +       Y+ SK A+  LT+  A    K  Y 
Sbjct: 117 IGCQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYA 175

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN I P G+ T M+  +              +E      +L R      G       I
Sbjct: 176 IRVNSIHPDGIYTPMMQASLPKGVS--------KEMVLHDPKLNR-----AGRAYMPERI 222

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A+  L+LASDES  +SG  L  D    
Sbjct: 223 AQLVLFLASDESSVMSGSELHADNSIL 249

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  291 bits (747), Expect = 1e-99
 Identities = 89/266 (33%), Positives = 122/266 (45%), Gaps = 24/266 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK  I+TGGARG+G    R  V  GA+VV+AD+ D  G A A  L        Y H D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V++E+D Q ++     + G +D L NNAG+         +       F  ++ IN+ G  
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG----MFLETESVERFRKVVEINLTGVF 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +GMK     M     G I++ +S A LMG     +Y  SK  + GL+K  A ELG   IR
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN + P    T M                   E   +  E       +  V  +  +IA 
Sbjct: 176 VNSVHPGMTYTPMT-----------------AETGIRQGEGNYPNTPMGRVGNEPGEIAG 218

Query: 253 AALYLASDESKYISGHNLVVDGGFTT 278
           A + L SD S Y++G  L VDGG+TT
Sbjct: 219 AVVKLLSDTSSYVTGAELAVDGGWTT 244

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  290 bits (744), Expect = 7e-99
 Identities = 87/267 (32%), Positives = 124/267 (46%), Gaps = 18/267 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+AIVTG   GIG A  R     G  V+ ADID  A  A A  +            D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS EQ I  +++  ++  G +D L  NAGV+       S+ D    +FD +I IN+RGA 
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHL----ASLIDTTVEDFDRVIAINLRGAW 139

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  K+AA  M+ R  G I++ +S+A  +   G  AY +SK  I+ L++ TA EL   GIR
Sbjct: 140 LCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIR 199

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N + P  V T M   A                        +   A L+G      ++A 
Sbjct: 200 SNTLLPAFVDTPMQQTAM---------AMFDGALGAGGARSMI--ARLQGRMAAPEEMAG 248

Query: 253 AALYLASDESKYISGHNLVVDGGFTTS 279
             ++L SD++  I+G   + DGG   +
Sbjct: 249 IVVFLLSDDASMITGTTQIADGGTIAA 275

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  285 bits (733), Expect = 3e-97
 Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 25/272 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL--VTYLH 70
              ++ ++TGG  G+G AT       GAK+ + D+      A   ++L ++P   V    
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS E  ++  +  T  + GR+D  FNNAG+ G Q        F A EFD ++ IN+RG
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ---NPTESFTAAEFDKVVSINLRG 127

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             LG++   K+M  + SG +++TASV  + G      Y  +KH +VGLT+N+A E G+YG
Sbjct: 128 VFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYG 187

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-----LANLKGVTL 245
           IR+N I+P  + T M+        +        E   +  EE ++               
Sbjct: 188 IRINAIAPGAIWTPMV--------ENSMKQLDPENPRKAAEEFIQVNPSKRYG------- 232

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +A +IA    +L SD++ Y++   + +DGG +
Sbjct: 233 EAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 264

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  284 bits (728), Expect = 9e-97
 Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 21/270 (7%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL 69
           Y++L+ K+ IVTG   GIG A  + F  + + VV  ++ +     +   L      V  +
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGV 61

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DVS ++D++  +  T   + R+D+L NNAG++        + +     ++ ++ +N+ 
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV---TPVAEVSDELWERVLAVNLY 118

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
            A    +    +M+ +  G I++TAS+A + GG     YTV+KH ++GLT++ A   G  
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKA 247
           GIR   + P  V T++ + +              +  E  M  L + ++         + 
Sbjct: 179 GIRAVAVLPGTVKTNIGLGSS-------------KPSELGMRTLTKLMSLSSRLA---EP 222

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            DIA   ++LASDE+ +++G  +VVDGG T
Sbjct: 223 EDIANVIVFLASDEASFVNGDAVVVDGGLT 252

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  284 bits (729), Expect = 9e-97
 Identities = 90/265 (33%), Positives = 135/265 (50%), Gaps = 22/265 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              K+AIVTGG+ GIG A V   V++GAKVV   +D+ + + ++D          +   D
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD----------HFKID 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E++++  +  T  K+GR+DIL NNAG+      +  +       +  II +NV G+ 
Sbjct: 62  VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ----YSPLHLTPTEIWRRIIDVNVNGSY 117

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  KY   VM+    G II+ ASV S        AY  SKHA++GLT++ A +     IR
Sbjct: 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N + P  + T M++ A K      + G+     E K+EE  R      G   +  ++AE
Sbjct: 177 CNAVCPGTIMTPMVIKAAKM-----EVGEDENAVERKIEEWGRQHPM--GRIGRPEEVAE 229

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
              +LASD S +I+G  L VDGG  
Sbjct: 230 VVAFLASDRSSFITGACLTVDGGLL 254

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  281 bits (722), Expect = 2e-95
 Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 27/288 (9%)

Query: 1   MNLNTEKKAYKT--LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS 58
           ++L TE   +++  L  ++ IVTGG  GIG AT  LF K+GA VV+AD+++ A + +A+ 
Sbjct: 11  VDLGTENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE 70

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
           + S       +  DVS  +D ++++  T +K GR+D+L NNAG         ++      
Sbjct: 71  IGSK---AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGF----GTTGNVVTIPEE 123

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
            +D I+ +NV+G  L  KY   VM     G II+T S  +        AY  SK AI  L
Sbjct: 124 TWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL 183

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---R 235
           T+  A +  K GIRVN ++P  + +                 K   +            R
Sbjct: 184 TRAMAMDHAKEGIRVNAVAPGTIDSPYF-------TKIFAEAKDPAKLRSDFNARAVMDR 236

Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCV 283
            +         A +IAEA L+LASD S++ +G  L VDGG +   + V
Sbjct: 237 -MG-------TAEEIAEAMLFLASDRSRFATGSILTVDGGSSIGNHLV 276

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  280 bits (719), Expect = 5e-95
 Identities = 89/272 (32%), Positives = 120/272 (44%), Gaps = 22/272 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGKIAIVTG + GIG A   LF + GAKVV+   +  A   L D +         L  D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V  E   + L+ + + + G LD  FNNAG LG       I+      +   +  N+  A 
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALG---AMGEISSLSVEGWRETLDTNLTSAF 122

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  KY    +     G +  T+S      G  G   Y  SK  ++GL +  A ELG  GI
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKARD 249
           RVN + P G  T                         +    V GL  LK      +  +
Sbjct: 183 RVNALLPGGTDTPANFANL-------------PGAAPETRGFVEGLHALKRIA---RPEE 226

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
           IAEAALYLASD + +++G  L+ DGG + +K 
Sbjct: 227 IAEAALYLASDGASFVTGAALLADGGASVTKA 258

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  279 bits (716), Expect = 1e-94
 Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 22/265 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LE K+AI+TG   GIG  T R+  + GA+VV+AD+ +      A S+        +   D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVD 65

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ E  ++ LI+ TI   GRLDI+ NNA           +T    + +D+   +N RG  
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSD--PADMLVTQMTVDVWDDTFTVNARGTM 123

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  KYA   ++    G I++ +S  +        AY  +K AI  LT+  A + G++G+R
Sbjct: 124 LMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVR 183

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N I+P  V T  L                    +  ++       +L G   +  +IAE
Sbjct: 184 CNAIAPGLVRTPRLEVGL---------------PQPIVDIFAT--HHLAGRIGEPHEIAE 226

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
              +LASD + +I+G  +  D G  
Sbjct: 227 LVCFLASDRAAFITGQVIAADSGLL 251

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  279 bits (715), Expect = 1e-94
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 31/270 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             GK+ +VTGG RGIG   VR FV  GA+VVI D D++ G AL   L        ++ CD
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILCD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E D++ L++ TI + GRLD + NNAG        +   +  A  F  ++ +N+ G  
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHP---PPQRPEETSAQGFRQLLELNLLGTY 119

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K A   +  +  G +I+ +S+   +G      Y  +K A+  +TK  A +   YG+R
Sbjct: 120 TLTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR 178

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-----LANLKGVTLKA 247
           VNCISP  + T +         D              + E +       +        + 
Sbjct: 179 VNCISPGNIWTPLWEELAALMPD----------PRASIREGMLAQPLGRMG-------QP 221

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++  AA++LAS+ + + +G  L+V GG  
Sbjct: 222 AEVGAAAVFLASE-ANFCTGIELLVTGGAE 250

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  274 bits (704), Expect = 4e-93
 Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 5/265 (1%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K   GK+ +VTG    IG AT     + G  + + D++  A      S+           
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ E+ +   ++  +   G++D LFNNAG  G       + D+ +++F  ++ INV G
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF---APVQDYPSDDFARVLTINVTG 119

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A   +K  ++ M+ +  G I++TAS+A + G     AY  SK AI+ LT+  A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN ISP  +    +       +  + S     + +   ++++  +           +I
Sbjct: 180 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP--MRRYGDINEI 237

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
                +L  D+S +++G NL + GG
Sbjct: 238 PGVVAFLLGDDSSFMTGVNLPIAGG 262

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  270 bits (694), Expect = 1e-91
 Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHCDV 73
            ++AIVTG + G G A    F+  G +V   D+        A +   +    V  +  DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           + E D+   I  T+ + G +D+L NNAG+ GN  +   +      +FD ++ +NVRG  L
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNS-EAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
           G +     M+ + +G I++ ASVASL+   G  AYT SK A++ LTK+ A +    GIR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV--RGLANLKGVTLKARDIA 251
           N + P  + T M        +  +D      E  +++   +  + +         A  +A
Sbjct: 181 NAVCPGMIETPMT-------QWRLDQ----PELRDQVLARIPQKEIG-------TAAQVA 222

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
           +A ++LA +++ Y++G  LV+DG +T
Sbjct: 223 DAVMFLAGEDATYVNGAALVMDGAYT 248

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  270 bits (692), Expect = 3e-91
 Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 28/276 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             GK  +VTGGARGIG A  + F + GA V + D+       +A+++        +   D
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGG-----AFFQVD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +  E++    +       GR+D+L NNA +    +   S       E+  ++ +N+    
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAI----AAPGSALTVRLPEWRRVLEVNLTAPM 113

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
                AA+ M     G I++ ASV  L       AY  SK  +V LT++ A +L    IR
Sbjct: 114 HLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIR 173

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTLKARD 249
           VN ++P  +AT  ++ A     D        E      E+L    R      G   K  +
Sbjct: 174 VNAVAPGAIATEAVLEAIALSPD-------PERTRRDWEDLHALRRL-----G---KPEE 218

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL 285
           +AEA L+LAS+++ +I+G  L VDGG T S    G 
Sbjct: 219 VAEAVLFLASEKASFITGAILPVDGGMTASFMMAGR 254

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  267 bits (685), Expect = 4e-90
 Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)

Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTY 68
            +  L  K+ IVTG + GIG A    FV  G+KV+   I D                  +
Sbjct: 2   GFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK-----------YDH 50

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           + CDV+    ++  I+    ++G + +L NNAG+      +  I      E+  II +N+
Sbjct: 51  IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI----ESYGKIESMSMGEWRRIIDVNL 106

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            G     K+A   M+  R   I++ +SV + +      AY  SKHA++GLTK+ A +   
Sbjct: 107 FGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 166

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-----LANLKGV 243
             +R N + P  + T ++  A +      + G      E+K+ E         +      
Sbjct: 167 -LLRCNAVCPATIDTPLVRKAAEL-----EVGSDPMRIEKKISEWGHEHPMQRIG----- 215

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             K +++A A  +LAS E+ +I+G  L VDGG +
Sbjct: 216 --KPQEVASAVAFLASREASFITGTCLYVDGGLS 247

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  267 bits (684), Expect = 5e-90
 Identities = 84/272 (30%), Positives = 123/272 (45%), Gaps = 30/272 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+A++TG   G GE   + F K GAKVVI D D A    +A  +         +  D
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAAD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S E D+   +   +SK G++DIL NNAG+     K ++    +  EFD I+ +NVRG  
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGH---KPQNAELVEPEEFDRIVGVNVRGVY 120

Query: 133 LGMKYAAKVMVPRRSG----CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           L             +      I++ AS  +         Y  +K  +V +TK  A EL  
Sbjct: 121 LMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAP 180

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTL 245
             IRV  ++P    T +L             G+  EE  +K  + +   R L        
Sbjct: 181 AKIRVVALNPVAGETPLLTTFM---------GEDSEEIRKKFRDSIPMGR-LL------- 223

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           K  D+AEAA +L S ++  I+G  L VDGG +
Sbjct: 224 KPDDLAEAAAFLCSPQASMITGVALDVDGGRS 255

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  266 bits (683), Expect = 6e-90
 Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 31/271 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+AI+TGG  GIG A    FV+ GAKV+I       G   A S + +   + +   D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS-VGTPDQIQFFQHD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            S E     L + T    G +  L NNAG+  N    KS+ +    E+  ++ +N+ G  
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVF 118

Query: 133 LGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG--KY 189
            G +   + M  +  G  II+ +S+   +G     AY  SK A+  ++K+ A +     Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTLK 246
            +RVN + P  + T ++               P  EE             +        +
Sbjct: 179 DVRVNTVHPGYIKTPLV------------DDLPGAEEAMSQRTKTPMGH-IG-------E 218

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             DIA   +YLAS+ESK+ +G   VVDGG+T
Sbjct: 219 PNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  264 bits (677), Expect = 1e-88
 Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 26/270 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP---LVTYL 69
            + +  +VTGG  GIG+      V  GA V+I   +          L +       + Y 
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             D++ E +    ++   + HGRL  + + AG   N      IT  D+  +   + +NV 
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENI---GPITQVDSEAWRRTVDLNVN 125

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    +K+AA+ MV    G  +  +S+A+        AY V+K A+  L +  A ELG  
Sbjct: 126 GTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGAS 185

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKA 247
            +RVN I P  + T ++                  E  E   +       L   G   + 
Sbjct: 186 WVRVNSIRPGLIRTDLVAAIT--------------ESAELSSDYAMCTP-LPRQG---EV 227

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            D+A  A++L SD + +++G  + VDGG  
Sbjct: 228 EDVANMAMFLLSDAASFVTGQVINVDGGQM 257

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  264 bits (676), Expect = 2e-88
 Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 14/267 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
               +A++TG   GIG AT       G  V            +AD ++ +      L  D
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS E  ++N +   + K G LDI+  NAG+ G       I D    E+D  I +N+RG  
Sbjct: 86  VSDELQMRNAVRDLVLKFGHLDIVVANAGINGVW---APIDDLKPFEWDETIAVNLRGTF 142

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASL--MGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           L +      +  R  G I+  +S+         G  AYT +K A V + +  A ELGK+ 
Sbjct: 143 LTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHH 202

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN + P  + T++  N            +  EE    +E     +    G   ++ D+
Sbjct: 203 IRVNAVCPGAIETNISDNTK---------LRHEEETAIPVEWPKGQVPITDGQPGRSEDV 253

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           AE   +L S+ +++++G  + +DGG  
Sbjct: 254 AELIRFLVSERARHVTGSPVWIDGGQG 280

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  259 bits (664), Expect = 1e-86
 Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 23/282 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL------- 65
           +EGK+A VTG ARG G +      + GA ++  DI       + D+ + +S         
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 66  ---------VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD 116
                    +     DV     ++  ++  + + GRLDI+  NAG+        ++    
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN---GGDTLDKTS 125

Query: 117 ANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAI 175
             ++  +I IN+ G    +K     M+   R G II T+SV  L        Y  +KH +
Sbjct: 126 EEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185

Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           VGL +    ELG++ IRVN + P  V T ML N         D   P  ++   + ++  
Sbjct: 186 VGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM-- 243

Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               L    ++  DI+ A L+ ASDE++YI+G  L +D G  
Sbjct: 244 -FHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  257 bits (658), Expect = 9e-86
 Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 15/267 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G++A++TGGA G+G A V  FV  GA+V + D        L  +          +  D
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT-DFDANEFDNIIRINVRGA 131
           V   QD +      ++  G++D L  NAG+    +    +  D     FD+I  +NV+G 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +K     +V  R G ++ T S A      G   YT +KHA+VGL +  A EL    +
Sbjct: 120 IHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HV 177

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P G+ T +                        + ++++ +  + G      +  
Sbjct: 178 RVNGVAPGGMNTDLR-------GPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYT 229

Query: 252 EAALYLASDE-SKYISGHNLVVDGGFT 277
            A ++ A+   S   +G  L  DGG  
Sbjct: 230 GAYVFFATRGDSLPATGALLNYDGGMG 256

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  255 bits (655), Expect = 9e-86
 Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 34/271 (12%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLH 70
           +      +VTGG++GIG+A V L +++    VI  DI  +                 ++ 
Sbjct: 1   SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----------KFIK 50

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D++ +QDI N++++   K+   D +F NAG+        SI D D      ++ +NV  
Sbjct: 51  ADLTKQQDITNVLDII--KNVSFDGIFLNAGI----LIKGSIFDIDIESIKKVLDLNVWS 104

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           +   +K     +  +    I+   S    +      AYT+SK AI  +TK+ A +L KY 
Sbjct: 105 SIYFIKGLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQ 162

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---R-GLANLKGVTLK 246
           IRVN + P  V T +  N  +   +  + G   +E +++ E+     R           +
Sbjct: 163 IRVNTVCPGTVDTDLYRNLIQKYAN--NVGISFDEAQKQEEKEFPLNRIA---------Q 211

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++IAE  ++L SD+SK+++G  + +DGG+T
Sbjct: 212 PQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  254 bits (651), Expect = 9e-85
 Identities = 89/272 (32%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS---SSPLVTYL 69
              K+AI+TG + GIG AT  LF + GAKV I              +L+   S   V  +
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+ +     +++ T+ K G+LDIL NNAG     S+ K+ T      +D  + +N+R
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVAS-LMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
                 K A   +     G I++ +S+AS L        Y+++K AI   T+NTA +L +
Sbjct: 124 SVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 182

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLK 246
           +GIRVN ISP  VAT                    EE  +K    +  +      GV  +
Sbjct: 183 HGIRVNSISPGLVATGFGSAMGMP-----------EETSKKFYSTMATMKECVPAGVMGQ 231

Query: 247 ARDIAEAALYLASDE-SKYISGHNLVVDGGFT 277
            +DIAE   +LA  + S YI GH LVVDGG +
Sbjct: 232 PQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 263

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  252 bits (647), Expect = 2e-84
 Identities = 82/271 (30%), Positives = 138/271 (50%), Gaps = 36/271 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+ I+T  A+GIG+A    F + GAKV+  DI+++    L          +     D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-----GIQTRVLD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ ++ I        ++  RLD+LFN AG       H ++ D +  ++D  + +NVR   
Sbjct: 59  VTKKKQIDQF----ANEVERLDVLFNVAGF----VHHGTVLDCEEKDWDFSMNLNVRSMY 110

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
           L +K     M+ ++SG II+ +SVAS + G+     Y+ +K A++GLTK+ A +  + GI
Sbjct: 111 LMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-----LANLKGVTLK 246
           R NC+ P  V T  L    ++  +           EE   + ++       A        
Sbjct: 171 RCNCVCPGTVDTPSLQERIQARGN----------PEEARNDFLKRQKTGRFA-------T 213

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           A +IA   +YLASDES Y++G+ +++DGG++
Sbjct: 214 AEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  252 bits (646), Expect = 3e-84
 Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 33/284 (11%)

Query: 1   MNLNTEKKAYKT---LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD 57
           ++L TE   +++    EGK+A+VTG A GIG A V      GA+V +AD   A   A   
Sbjct: 11  VDLGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL- 69

Query: 58  SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                     +L  D+        L     +  GRLDI+ NNAGV         IT+   
Sbjct: 70  ----------HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV----ISRGRITETTD 115

Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
            ++   + +NV       + A  +M     G I++ AS   L  G G   Y ++K A+  
Sbjct: 116 ADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALAS 175

Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV--R 235
           LT+    +    GIR+N + P  V T ML   +         G   +    ++   V   
Sbjct: 176 LTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFA------KRGFDPDRAVAELGRTVPLG 229

Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            +A       +  DIA+  L+LASD ++Y+ G  + V+GG   +
Sbjct: 230 RIA-------EPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  252 bits (645), Expect = 5e-84
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 24/269 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L  KIA++TG   GIG A  + FV  GA+V I         A    +         + 
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQ 81

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D +   ++  L     ++ GR+D+LF NAG          + +    ++D+    NV+G
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRIDVLFVNAGG----GSMLPLGEVTEEQYDDTFDRNVKG 137

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               ++ A  ++   R   ++ T S A   G      Y  SK A+    +N   +L   G
Sbjct: 138 VLFTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRG 195

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKAR 248
           IR+N +SP    T+ LV                  +++ +   +     +   G   +A 
Sbjct: 196 IRINTLSPGPTETTGLVEL----------AGKDPVQQQGLLNALAAQVPMGRVG---RAE 242

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           ++A AAL+LASD+S +++G  L VDGG  
Sbjct: 243 EVAAAALFLASDDSSFVTGAELFVDGGSA 271

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  250 bits (642), Expect = 1e-83
 Identities = 84/272 (30%), Positives = 120/272 (44%), Gaps = 23/272 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK A++TG ARGIG A    +V+ GA V IADID       A  +    P    +  D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +  I   I  T+   G LDIL NNA +         I +     ++ +  INV G  
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAAL----FDLAPIVEITRESYEKLFAINVAGTL 118

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             ++ AA+ M+ + R G II+ AS A   G      Y  +K A++ LT++   +L K+ I
Sbjct: 119 FTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
            VN I+P  V                   +P  E++  +          + V       A
Sbjct: 179 NVNAIAPGVVDGEHWDGVDALFAR--YENRPRGEKKRLV---------GEAVPFGRMGTA 227

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            D+   A++LAS ES YI      VDGG   S
Sbjct: 228 EDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  248 bits (636), Expect = 1e-82
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 23/270 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K LE K+A+VT    GIG A  R   + GA VV++            +L      VT   
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           C V   +D + L+ + ++ HG +DIL +NA V        +I D     +D I+ +NV+ 
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPF---FGNIIDATEEVWDKILHVNVKA 126

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             L  K     M  R  G ++  +SV +         Y VSK A++GLTKN A EL    
Sbjct: 127 TVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRN 186

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKAR 248
           IRVNC++P  + T+     W               ++ + E +   L  ++  G      
Sbjct: 187 IRVNCLAPGLIKTNFSQVLW--------------MDKARKEYMKESLR-IRRLG---NPE 228

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFTT 278
           D A    +L S+++ YI+G  +VV GG  +
Sbjct: 229 DCAGIVSFLCSEDASYITGETVVVGGGTAS 258

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  248 bits (635), Expect = 4e-82
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 19/278 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-----IALADSLLSSSPLVT 67
           +EGK+A +TG ARG G +      + GA ++  D+          ++  D L  +   V 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 68  -------YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                      DV     +Q  ++  +++ GRLDI+  NA +         +   D   +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG---TRLNRMDPKTW 142

Query: 121 DNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
            ++I +N+ GA +  + A   ++  +R G I+ T+S+  L G      Y  SKH + GL 
Sbjct: 143 RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLM 202

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           +  A ELG   IRVN + P  VAT ML+N         D   P  E+ +        +  
Sbjct: 203 RTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQ---MHV 259

Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           L    ++  DI+ A L+L SD+++YI+G +L VDGG  
Sbjct: 260 LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  247 bits (632), Expect = 4e-82
 Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 30/269 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK AI+TG   GIG+     F   GA VV++DI+  A   + D +           CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ EQ++  L +  ISK G++DIL NNAG            D    +F     +NV    
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGG-----GPKPFDMPMADFRRAYELNVFSFF 123

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +  A  M     G I++  S+A+    +   +Y  SK A   L +N A +LG+  IR
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----AR 248
           VN I+P  + T  L +                E E+KM         L+   ++     +
Sbjct: 184 VNGIAPGAILTDALKSVIT------------PEIEQKM---------LQHTPIRRLGQPQ 222

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           DIA AAL+L S  + ++SG  L V GG  
Sbjct: 223 DIANAALFLCSPAASWVSGQILTVSGGGV 251

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  245 bits (629), Expect = 2e-81
 Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 31/273 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+G  A+VTGG++GIG A V      GA+V     ++       +        V    CD
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78

Query: 73  VSLEQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +    +   L+        G+L+IL NNAGV      HK   DF   +++ I+  N   A
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGV----VIHKEAKDFTEKDYNIIMGTNFEAA 134

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + A  ++   ++G +I  +S+A          Y+ SK AI  +TK+ ACE  K  I
Sbjct: 135 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 194

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-------GLANLKGVT 244
           RVN ++P  + T ++  A K              ++E+++  +        G        
Sbjct: 195 RVNSVAPGVILTPLVETAIKKNPH----------QKEEIDNFIVKTPMGRAG-------- 236

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            K ++++    +L    + YI+G  +  DGGFT
Sbjct: 237 -KPQEVSALIAFLCFPAASYITGQIIWADGGFT 268

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  245 bits (629), Expect = 2e-81
 Identities = 75/279 (26%), Positives = 113/279 (40%), Gaps = 26/279 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL------- 65
           LEG++A +TG ARG G A        GA ++  DI       +     S   L       
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 66  ------VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                 +     D      ++ +++  ++  GRLDI+  NAGV       ++  D    +
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA----PQAWDDITPED 124

Query: 120 FDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           F +++ INV G    +   A  ++   R G II  +S A +        YT SKHA+ GL
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGL 184

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
            +  A ELGK+ IRVN + P  V T M      +         P                
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDW--- 241

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                  +  DIA+   +LASDES+ ++   + VD G T
Sbjct: 242 -----VAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  245 bits (627), Expect = 2e-81
 Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 29/271 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ ++AIVTGGA+ IG A V    + GA+V+IAD+D+A      + L      V+ +  D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+  + +QN +     + GR+DIL   AG+           D    ++   + IN+ G  
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGI---CISEVKAEDMTDGQWLKQVDINLNGMF 127

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYG 190
              +   ++M+ ++ G I++  S++ L+        AY  SK  +    ++ A E   +G
Sbjct: 128 RSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHG 187

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK---- 246
           IR N ++P  + T++               +   E+ E  +        + G  +     
Sbjct: 188 IRANAVAPTYIETTLT--------------RFGMEKPELYDAW------IAGTPMGRVGQ 227

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             ++A    +LASD +  ++G  + VD GFT
Sbjct: 228 PDEVASVVQFLASDAASLMTGAIVNVDAGFT 258

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  245 bits (627), Expect = 2e-81
 Identities = 58/265 (21%), Positives = 115/265 (43%), Gaps = 15/265 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L  K+ +++G    +G    R   + GA +V+A         +A  +  +      +  D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ +  + +L++ T+  +GR+D++ NNA  +      K   +       + I + V GA 
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVP---SMKPFANTTFEHMRDAIELTVFGAL 125

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             ++     +     G +++  S+          AY ++K A++ +++  A ELG+ GIR
Sbjct: 126 RLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIR 184

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKARDI 250
           VN + P  +    L + ++       +GK     E+       G   LK         ++
Sbjct: 185 VNSVLPGYIWGGTLKSYFEH-----QAGKYGTSVEDIYNAAAAGSD-LKRLP---TEDEV 235

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
           A A L++ASD +  I+G  L V+ G
Sbjct: 236 ASAILFMASDLASGITGQALDVNCG 260

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  244 bits (626), Expect = 4e-81
 Identities = 83/271 (30%), Positives = 123/271 (45%), Gaps = 30/271 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L+GK A++TG  +GIG    R F   GA++V++  D +   A   +L       V  +  
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D++       L        G LD+L NNAG+    S  + + D D   FD  I +N+R  
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGI----SHPQPVVDTDPQLFDATIAVNLRAP 133

Query: 132 ALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           AL      K MV     G II+ AS A+L      +AY  SK  +V  TK  A ELG +G
Sbjct: 134 ALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHG 193

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL----K 246
           IR N + P  V T M    W               +E K   +      +  + L     
Sbjct: 194 IRANSVCPTVVLTEMGQRVW--------------GDEAKSAPM------IARIPLGRFAV 233

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             ++++A ++LASD +  I+G ++ VDGG+T
Sbjct: 234 PHEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  243 bits (622), Expect = 2e-80
 Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 31/274 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTY 68
             + GK+A+VTG A+GIG A     +  GAKV + D +  AG+    +L          +
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           + CDV+ +Q +++     +   GRLDIL NNAG          + +     ++  ++IN+
Sbjct: 63  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG----------VNNEK--NWEKTLQINL 110

Query: 129 RGAALGMKYAAKVMVPRRSG---CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA-- 183
                G       M  +  G    II+ +S+A LM       Y  SKH IVG T++ A  
Sbjct: 111 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 170

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
             L   G+R+N I P  V T++L        + ++  +   +  E  + +   +    G+
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAIL--------ESIEKEENMGQYIEYKDHIKDMIK-YYGI 221

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            L    IA   + L  D++  ++G  + +     
Sbjct: 222 -LDPPLIANGLITLIEDDA--LNGAIMKITTSKG 252

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  241 bits (617), Expect = 1e-79
 Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 27/280 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL------- 65
           L+G++A +TG ARG G +        GA ++  DI      ++  +  S   L       
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 66  ------VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                       DV  +  ++ L+   + + GRLD++  NAGVL        + +    +
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL----SWGRVWELTDEQ 128

Query: 120 FDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           +D +I +N+ G    ++     M+     G I+  +S A L    G   Y+ SKH +  L
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           T   A ELG+YGIRVN I P+ V T M+              +        +        
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPMIEPE--------AMMEIFARHPSFVHSFPPMPV 240

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
              G  + A ++A+   +LA D S  ++G  + VD G   
Sbjct: 241 QPNGF-MTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK 279

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  241 bits (617), Expect = 1e-79
 Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 19/274 (6%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL---VT 67
                K  I+TG + GIG  T  LF + GA V I              +L S      V 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            +  DV+ E     +IN T+ + G++D+L NNAG     +   + TD   + +   +++N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTAS-VASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           ++      K     +V    G I++ +S VA          Y ++K A+   T++TA +L
Sbjct: 122 LQAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVT 244
            K+GIRVN +SP  V T              ++    ++  +K    +         G  
Sbjct: 181 AKFGIRVNSVSPGMVETGFT-----------NAMGMPDQASQKFYNFMASHKECIPIGAA 229

Query: 245 LKARDIAEAALYLASDE-SKYISGHNLVVDGGFT 277
            K   IA   L+LA    S YI G ++V DGG +
Sbjct: 230 GKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  239 bits (612), Expect = 3e-79
 Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 33/268 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS---SSPLVTYL 69
           L  +I +VTG + GIG      + ++GA V++   ++     +A  +       P    L
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
                  ++ Q L       + RLD + +NAG+LG+      +++ +   + +++++NV 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVC---PMSEQNPQVWQDVMQVNVN 126

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
              +  +    +++   +G ++ T+S     G     AY  SK A  G+ +  A E  + 
Sbjct: 127 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ- 185

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            +RVNCI+P G  T+M  +A+ + ED      P                          D
Sbjct: 186 RLRVNCINPGGTRTAMRASAFPT-EDPQKLKTP-------------------------AD 219

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           I    L+L  D+S+  +G       G  
Sbjct: 220 IMPLYLWLMGDDSRRKTGMTFDAQPGRK 247

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  234 bits (599), Expect = 4e-77
 Identities = 82/269 (30%), Positives = 121/269 (44%), Gaps = 30/269 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L   +AIVTG A GIG A    F K GA VV+ D+      A+A ++  +      L C+
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ EQ  + +I   + + G++ +L NNAG            D   ++F+   ++N+    
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGG-----GPKPFDMPMSDFEWAFKLNLFSLF 124

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              + AA  M     G I++ +S+A     +   +Y  SK A+  LT+N A ++G  GIR
Sbjct: 125 RLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIR 184

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----AR 248
           VN I+P  + T  L                  E E  M         LK   L     A+
Sbjct: 185 VNAIAPGAIKTDALATVLT------------PEIERAM---------LKHTPLGRLGEAQ 223

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           DIA AAL+L S  + +ISG  L V GG  
Sbjct: 224 DIANAALFLCSPAAAWISGQVLTVSGGGV 252

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  233 bits (598), Expect = 6e-77
 Identities = 71/275 (25%), Positives = 115/275 (41%), Gaps = 32/275 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEG  A+VTGG+RGIG   V      GA V     +            S    V    CD
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66

Query: 73  VSLEQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +S   + Q L+N   +  HG+L+IL NNAG+      +K   D+   ++  I+ IN   A
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGI----VIYKEAKDYTVEDYSLIMSINFEAA 122

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
                 A   +     G ++  +SV+  +       Y  +K A+  LT+  A E  K  I
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-------GLANLKGVT 244
           RVN + P  +ATS++    +             E++E + +L+        G        
Sbjct: 183 RVNGVGPGVIATSLVEMTIQD-----------PEQKENLNKLIDRCALRRMG-------- 223

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            + +++A    +L    + Y++G  + VDGG   +
Sbjct: 224 -EPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  233 bits (596), Expect = 8e-77
 Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 29/269 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            E K+ IVTG   GIG+A      + GA VV+ADI+  A  A+A  +++       +  D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  +  + + + T+++ G +D L NNA + G   K   +   D   +   + +N+ GA 
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGG-MKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +   K M  R  G I++ +S A+ +       Y ++K  I GLT+  + ELG   IR
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGRNIR 182

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----AR 248
           +N I+P  + T                    +E  + +         +KG+ L       
Sbjct: 183 INAIAPGPIDTEAN-------RTTTP-----KEMVDDI---------VKGLPLSRMGTPD 221

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           D+    L+L SDE+ +I+G    VDGG  
Sbjct: 222 DLVGMCLFLLSDEASWITGQIFNVDGGQI 250

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  233 bits (596), Expect = 1e-76
 Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 20/271 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLH 70
           L   +A+VTGG+ GIG ATV L ++ GA V     D     A   +L    P   +    
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV     ++          G   IL NNAG    Q +  +  +     +   +++    
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAG----QGRVSTFAETTDEAWSEELQLKFFS 121

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
               ++     +  R    I+   S+ +        A + ++  +  L ++ A E    G
Sbjct: 122 VIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKG 181

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL----K 246
           +RVN I    V +      +++           EE E    +    LA  K + L    K
Sbjct: 182 VRVNGILIGLVESGQWRRRFEA----------REERELDWAQWTAQLARNKQIPLGRLGK 231

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             + A A L+LAS  S Y +G ++ V GG +
Sbjct: 232 PIEAARAILFLASPLSAYTTGSHIDVSGGLS 262

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  232 bits (595), Expect = 2e-76
 Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 28/273 (10%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTY 68
           YK LEGK+ ++TG + G+G++    F    AKVV+     +    ++ + +         
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV++E D+ NL+   I + G+LD++ NNAG+        S  +   ++++ +I  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL----ENPVSSHEMSLSDWNKVIDTNL 117

Query: 129 RGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            GA LG + A K  V     G +I+ +SV   +       Y  SK  +  +T+  A E  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVT 244
             GIRVN I P  + T +    +              E+   +E ++          G  
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFAD-----------PEQRADVESMIPMGYI-----G-- 219

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            +  +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 220 -EPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  234 bits (598), Expect = 2e-76
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 21/272 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS---SPLVTYL 69
             GK  I+TG + GIG +   +F K GA+V I   ++         +L +   +  +  +
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+      ++IN T++K G++DIL NNAG         + TD     +    ++N +
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT--ANTDQPVELYQKTFKLNFQ 141

Query: 130 GAALGMKYAAKVMVPRRSGCIISTAS-VASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
                 +   + ++ +  G I++ +S VA      G   Y  +K A+   T+ TA +L +
Sbjct: 142 AVIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLK 246
           +G+RVN +SP  VAT  +            +    E   +K+   +         G   K
Sbjct: 201 HGVRVNSVSPGAVATGFM-----------GAMGLPETASDKLYSFIGSRKECIPVGHCGK 249

Query: 247 ARDIAEAALYLAS-DESKYISGHNLVVDGGFT 277
             +IA   ++LA  + S YI G ++V DGG T
Sbjct: 250 PEEIANIIVFLADRNLSSYIIGQSIVADGGST 281

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  231 bits (591), Expect = 1e-75
 Identities = 80/279 (28%), Positives = 132/279 (47%), Gaps = 12/279 (4%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           ++L TE   ++++  K A++TG   GIG A  R   K GA +V+        I      +
Sbjct: 11  VDLGTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV 70

Query: 61  SSSP--LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
           +      V +   D++   +I +++ +   + G  DIL NNAGV       + I DF   
Sbjct: 71  AGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGV----QFVEKIEDFPVE 126

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           ++D II +N+  +   ++ A   M  +  G II+ AS   L+      AY  +KH I+GL
Sbjct: 127 QWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGL 186

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           TK  A E+ + G+ VN I P  V T ++       +     G     EE+ + E++    
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPLVEKQIP--DQARTRGIT---EEQVINEVMLKGQ 241

Query: 239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             K        +A  ALYLA D++  I+G ++ +DGG+T
Sbjct: 242 PTKKFI-TVEQVASLALYLAGDDAAQITGTHVSMDGGWT 279

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  229 bits (587), Expect = 2e-75
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS---SSPLVT 67
           + L+G++ +VTG ARGIG A  R +  HGA VV+    +A+   ++D + S     PL+ 
Sbjct: 10  ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLII 69

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            L+ + +  Q  + L      + GRLD L +NA ++G ++    +      +F  ++ +N
Sbjct: 70  ALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRT---PLEQLPDEDFMQVMHVN 126

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL- 186
           V    +  +    ++       I  T+S     G     AY VSK A  GL +  A EL 
Sbjct: 127 VNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELE 186

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
           G   +R N I+P    T M   A+   E+ +++  P                        
Sbjct: 187 GVTAVRANSINPGATRTGMRAQAYPD-ENPLNNPAP------------------------ 221

Query: 247 ARDIAEAALYLASDESKYISGHNL 270
             DI    LYL   +S  I+G  L
Sbjct: 222 -EDIMPVYLYLMGPDSTGINGQAL 244

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  230 bits (588), Expect = 2e-75
 Identities = 81/270 (30%), Positives = 122/270 (45%), Gaps = 23/270 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+ AIVTGG++GIG A  R   K GA V IAD+D  A  A+   L         +  D
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL---ENGGFAVEVD 66

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +   +   I   G  D+L  NAGV    S  +   D    E+D    +N RG  
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGV----STMRPAVDITDEEWDFNFDVNARGVF 122

Query: 133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  + A +  +   + G I++TAS+A+ +G      Y+ SK A+ G T+  A E+    I
Sbjct: 123 LANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
           RVNC+ P  V T+M        E   ++       E    E       +    L      
Sbjct: 183 RVNCVCPGFVKTAMQER-----EIIWEAELRGMTPEAVRAEY------VSLTPLGRIEEP 231

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            D+A+  ++LASD +++++G  + V GG  
Sbjct: 232 EDVADVVVFLASDAARFMTGQGINVTGGVR 261

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  229 bits (586), Expect = 3e-75
 Identities = 77/267 (28%), Positives = 119/267 (44%), Gaps = 26/267 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            +GK AIV GG  G+G ATVR  V+ GA+V++   +++    + +      P V  L  D
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++   +I  L        G +D+L  NAGV    S+ +         +D    +N +GA 
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEPFDQVSEASYDRQFAVNTKGAF 118

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             ++    ++  R  G I+ T+SVA   G  G   Y+ SK A+V      A EL   GIR
Sbjct: 119 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIR 176

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKARDI 250
           VN +SP  + T                    E E  + + L   +  +K  G    A ++
Sbjct: 177 VNSVSPGFIDTPT-----------KGVAGITEAERAEFKTLGDNITPMKRNG---TADEV 222

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A A L+LA + + + +G  L VDGG  
Sbjct: 223 ARAVLFLAFE-ATFTTGAKLAVDGGLG 248

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  230 bits (588), Expect = 4e-75
 Identities = 68/288 (23%), Positives = 112/288 (38%), Gaps = 34/288 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-----IALADSLLSSSPLVT 67
           ++ K+ +VTGGARG G +      + GA +++ DI          +A +  L  +   V 
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 68  -------YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                      DV     +   +   +++ G+LD++  NAG+                 F
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG------AHLPVQAF 121

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLGPHAYT 169
            +   ++  G    +  A   +       II+T SVA L+            G G   Y+
Sbjct: 122 ADAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYS 179

Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK 229
            +K  +   T   A +L    IR N I P  V T ML +A    +   D   P   +   
Sbjct: 180 YAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALL 239

Query: 230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               ++ +        +A DI+ A  +LASDES+Y++G    VD G  
Sbjct: 240 AFPAMQAMPTPYV---EASDISNAVCFLASDESRYVTGLQFKVDAGAM 284

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  227 bits (582), Expect = 2e-74
 Identities = 76/283 (26%), Positives = 118/283 (41%), Gaps = 33/283 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-----IALADSLLSSSPLVT 67
           L GK+A +TG ARG G A        GA ++  D+ D        +A  + L ++  LV 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 68  -------YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                      DV   + +   +   + + GRLDI+  NAG+               + +
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP--------MSAGDDGW 122

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPH----AYTVSKHAI 175
            ++I +N+ G    +K A   +V + + G I+  +S A L G          Y  +KH +
Sbjct: 123 HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV 182

Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           VGL +  A  L    IRVN I P GV T M+ N     E   +         +    +  
Sbjct: 183 VGLMRVYANLLAGQMIRVNSIHPSGVETPMINN-----EFTREWLAKMAAATDTPGAM-- 235

Query: 236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
               +    L   D+A A  +L SD+++YI+G  L VD GF  
Sbjct: 236 -GNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  227 bits (582), Expect = 2e-74
 Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 34/272 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK A++TG + GIG+     + + GA+V +A     A   +AD +         + CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    ++ +++    + G +DI   NAG+       +++ D    EF  I   NV G  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGI----VSVQAMLDMPLEEFQRIQDTNVTGVF 145

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKY 189
           L  + AA+ MV +   G II+TAS++  +  +      Y  SK A+V LTK  A EL  +
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH 205

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---R-GLANLKGVTL 245
            IRVN +SP  + T ++              +P  +     E  +   R G         
Sbjct: 206 QIRVNSVSPGYIRTELV--------------EPLADYHALWEPKIPLGRMG--------- 242

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +  ++    LYLAS  S Y++G ++V+DGG+T
Sbjct: 243 RPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  227 bits (580), Expect = 2e-74
 Identities = 77/266 (28%), Positives = 116/266 (43%), Gaps = 13/266 (4%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           TL+GK A+VTG   GIG    ++  + GA +V+    D A       +        +   
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+S    I+ L  +   + G +DIL NNAG+         +  F    +D II +N+   
Sbjct: 59  DLSDVAQIEALFALAEREFGGVDILVNNAGI----QHVAPVEQFPLESWDKIIALNLSAV 114

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             G + A   M  R  G II+ ASV  L+G  G  AY  +KH +VGLTK    E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
             N I P  V T ++    K  +D   +G   +  + + + L     +L  VT     + 
Sbjct: 175 TCNAICPGWVLTPLVQ---KQIDDRAANGG--DPLQAQHDLLAEKQPSLAFVT--PEHLG 227

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
           E  L+L S+    + G    VDGG+ 
Sbjct: 228 ELVLFLCSEAGSQVRGAAWNVDGGWL 253

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  226 bits (578), Expect = 4e-74
 Identities = 71/271 (26%), Positives = 106/271 (39%), Gaps = 34/271 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD--IDDAAGIALADSLLSSSPLVTYLH 70
             GK   VTG  +GIG AT   FV+ GAKV   D                          
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFAT------------EV 52

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+    +  +    +++  RLD L N AG+L    +  +       ++     +NV G
Sbjct: 53  MDVADAAQVAQVCQRLLAETERLDALVNAAGIL----RMGATDQLSKEDWQQTFAVNVGG 108

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A    +        +R G I++ AS A+    +G  AY  SK A+  L  +   EL   G
Sbjct: 109 AFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSG 168

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK---- 246
           +R N +SP    T M    W          +      E+            G+ L     
Sbjct: 169 VRCNVVSPGSTDTDMQRTLW---VSDDAEEQRIRGFGEQF---------KLGIPLGKIAR 216

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++IA   L+LASD + +I+  ++VVDGG T
Sbjct: 217 PQEIANTILFLASDLASHITLQDIVVDGGST 247

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  225 bits (577), Expect = 5e-74
 Identities = 44/265 (16%), Positives = 79/265 (29%), Gaps = 28/265 (10%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
            IA+VT      G A V    + G  VV  D   A           +             
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN------PGTIALA 55

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           EQ  + L++ T+     +D + +N  +    +    +      +   +         L +
Sbjct: 56  EQKPERLVDATLQHGEAIDTIVSNDYIPRPMN-RLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           + A   +       +I   S            Y  ++ A V L ++ A  L + GI +  
Sbjct: 115 QSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYA 174

Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---R-GLANLKGVTLKARDIA 251
           I P                      +   E  E+++  V   R G         +  ++ 
Sbjct: 175 IGPNFFNNPTY--------FPTSDWENNPELRERVDRDVPLGRLG---------RPDEMG 217

Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
               +LAS  +  I G      GG+
Sbjct: 218 ALITFLASRRAAPIVGQFFAFTGGY 242

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  225 bits (577), Expect = 6e-74
 Identities = 76/267 (28%), Positives = 110/267 (41%), Gaps = 22/267 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L+ K+A++TGGA GIG A    F   GA + IAD+  A       ++ +    V  + 
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVK 60

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDVS   D++      IS  GR DIL NNAG+           +    ++     INV  
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGI----YPLIPFDELTFEQWKKTFEINVDS 116

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             L  K     M     G II+  S    +       Y  +K A +G T+  A +LGK G
Sbjct: 117 GFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDG 176

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           I VN I+P  V T+    +                    +   +              D+
Sbjct: 177 ITVNAIAPSLVRTATTEASA-------------LSAMFDVLPNMLQAIPRLQ---VPLDL 220

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
             AA +LASD++ +I+G  L VDGG  
Sbjct: 221 TGAAAFLASDDASFITGQTLAVDGGMV 247

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  225 bits (576), Expect = 6e-74
 Identities = 69/271 (25%), Positives = 108/271 (39%), Gaps = 39/271 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+  +VTG  +GIG  TV+     GA+VV      A   +L        P+      D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC----VD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +   +  +      +   G +D+L NNA V    +  +   +     FD    +N+R   
Sbjct: 61  LGDWEATER----ALGSVGPVDLLVNNAAV----ALLQPFLEVTKEAFDRSFEVNLRAVI 112

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ ++ R   G I++ +S  S         Y  +K A+  LTK  A ELG + I
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG-----LANLKGVTLK 246
           RVN ++P  V TSM    W               +  K + ++        A       +
Sbjct: 173 RVNAVNPTVVMTSMGQATW--------------SDPHKAKTMLNRIPLGKFA-------E 211

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              +  A L+L SD S   +G  L V+GGF 
Sbjct: 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGFW 242

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  225 bits (577), Expect = 9e-74
 Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 30/269 (11%)

Query: 13  LEGKIAIVTGGA-RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLH 70
           L+GK+ +VT  A  GIG  T R  +  GA VVI+D  +       D L       V  + 
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+  + +  LI  T+ K GRLD+L NNAG+         + D    E+D ++ + +  
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGL----GGQTPVVDMTDEEWDRVLNVTLTS 135

Query: 131 AALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                + A +        G I++ ASV           Y  +K  ++ LT+ +A E  ++
Sbjct: 136 VMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEF 195

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTLK 246
           G+R+N +SP       L       E          E  +++       R          +
Sbjct: 196 GVRINAVSPSIARHKFL-------EKTSS-----SELLDRLASDEAFGRA-----A---E 235

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGG 275
             ++A    +LASD S Y++G  + V   
Sbjct: 236 PWEVAATIAFLASDYSSYMTGEVVSVSSQ 264

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  225 bits (576), Expect = 9e-74
 Identities = 81/269 (30%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+A+VTG  +GIG+A     VK G  V IAD +DA   A+A  +  +      +  DVS 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
              +   +       G  D++ NNAGV    +    I        D +  INV+G   G+
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGV----APSTPIESITPEIVDKVYNINVKGVIWGI 118

Query: 136 KYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           + A +        G II+  S A  +G      Y+ SK A+ GLT+  A +L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178

Query: 195 CISPFGVATSMLVNAWKSCEDCM--DSGKPCEEEEEKMEELVRGLANLKGVTLK----AR 248
              P  V T M    W   +  +   +GKP      +           K +TL       
Sbjct: 179 GYCPGIVKTPM----WAEIDRQVSEAAGKPLGYGTAEF---------AKRITLGRLSEPE 225

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           D+A    YLAS +S Y++G +L++DGG  
Sbjct: 226 DVAACVSYLASPDSDYMTGQSLLIDGGMV 254

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  225 bits (576), Expect = 2e-73
 Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 30/270 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K  +VTGG +GIG A V  F   GA +     ++                VT   CD
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71

Query: 73  VSLEQDIQNLINVTISKHG-RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
            SL  + + L+    S  G +LDIL NN G      + K   D+ A +F   I  N+  A
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGA----IRSKPTLDYTAEDFSFHISTNLESA 127

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + A  ++     G II  +S+A ++       Y+ +K A+  L +N ACE    GI
Sbjct: 128 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
           R N ++P  +AT +    +               ++E  + +      +    L      
Sbjct: 188 RANAVAPAVIATPLAEAVY---------------DDEFKKVV------ISRKPLGRFGEP 226

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            +++    +L    + YI+G  + VDGG T
Sbjct: 227 EEVSSLVAFLCMPAASYITGQTICVDGGLT 256

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  224 bits (573), Expect = 2e-73
 Identities = 67/275 (24%), Positives = 109/275 (39%), Gaps = 43/275 (15%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             G  A+VTG  +GIG  TV+     GAKVV     ++  ++LA       P+      D
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC----VD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +      +      +   G +D+L NNA +       +   +     FD    +N+R   
Sbjct: 61  LGDWDATEK----ALGGIGPVDLLVNNAAL----VIMQPFLEVTKEAFDRSFSVNLRSVF 112

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ M+ R   G I++ +S+ + +       Y+ +K A+  LTK  A ELG + I
Sbjct: 113 QVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-------GLANLKGVT 244
           RVN ++P  V T M                    + E   +L                  
Sbjct: 173 RVNSVNPTVVLTDMGKKVS--------------ADPEFARKLKERHPLRKFA-------- 210

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            +  D+  + L+L SD S   SG  ++VD G+  S
Sbjct: 211 -EVEDVVNSILFLLSDRSASTSGGGILVDAGYLAS 244

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  223 bits (570), Expect = 7e-73
 Identities = 84/267 (31%), Positives = 126/267 (47%), Gaps = 12/267 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLH 70
           L+GK+A+VTG   GIG          GA +V+    DAA I    + L++     V Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S  + ++ L++  + + GR+DIL NNAG+         I DF   ++D I+ +N+  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI----QHTALIEDFPTEKWDAILALNLSA 117

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
              G   A   M  +  G II+ AS   L+      AY  +KH +VG TK TA E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           I  N I P  V T ++    K      +     +E   + E L     +L+ VT     +
Sbjct: 178 ITANAICPGWVRTPLVE---KQISALAEKNGVDQETAAR-ELLSEKQPSLQFVT--PEQL 231

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
              A++LASD +  I+G  + VDGG+T
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGGWT 258

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  223 bits (572), Expect = 8e-73
 Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 29/270 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+A VTG + GIG A    + + GA V I      A         +         C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +S  + ++  I+      G +D+   NAGV    ++   I   + + ++ II +++ G  
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGV--TWTQGPEIDVDNYDSWNKIISVDLNGVY 149

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYG 190
                  K+      G +I T+S++  +  +      Y  +K A   L K+ A E   + 
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTLKA 247
            RVN ISP  + T +             +    ++ + K  +L    R      G     
Sbjct: 210 -RVNTISPGYIDTDI-------------TDFASKDMKAKWWQLTPLGRE-----G---LT 247

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +++    LYLAS+ S + +G ++V+DGG+T
Sbjct: 248 QELVGGYLYLASNASTFTTGSDVVIDGGYT 277

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  222 bits (569), Expect = 1e-72
 Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+G  A VTG   GIG    R F   GA++++ D + AA    A  L ++      +  D
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAV--AARIVAD 66

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+  + +             + IL N+AG+    ++     + D   +  ++ +NV G  
Sbjct: 67  VTDAEAMTAAAA-EAEAVAPVSILVNSAGI----ARLHDALETDDATWRQVMAVNVDGMF 121

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYG 190
              +   + MV R +G I++  S++  +        +Y  SK A+  LT+  A E    G
Sbjct: 122 WASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR-- 248
           +RVN ++P  VAT M                   E  E  E  +         T   R  
Sbjct: 182 VRVNALAPGYVATEM--------------TLKMRERPELFETWLDM-------TPMGRCG 220

Query: 249 ---DIAEAALYLASDESKYISGHNLVVDGGFT 277
              +IA AAL+LAS  + Y++G  L VDGG+T
Sbjct: 221 EPSEIAAAALFLASPAASYVTGAILAVDGGYT 252

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  222 bits (567), Expect = 2e-72
 Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 22/269 (8%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADI--DDAAGIALADSLLSSSPLVTYLHCD 72
            K+A+VTGGA+GIG          G  + +AD+   +         + ++     ++  D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ + +  + I+    K G  D+L NNAG+    ++ K + +    +   I  +NV    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGI----AQIKPLLEVTEEDLKQIYSVNVFSVF 117

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            G++ A++        G II+ AS+A++ G     AY+ +K A+ GLT+  A EL   G 
Sbjct: 118 FGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGH 177

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
            VN  +P  V T M    W+  +  +      +   E  +E          + L      
Sbjct: 178 TVNAYAPGIVGTGM----WEQIDAELSKING-KPIGENFKEY------SSSIALGRPSVP 226

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGF 276
            D+A    +LAS+ S Y++G  ++VDGG 
Sbjct: 227 EDVAGLVSFLASENSNYVTGQVMLVDGGM 255

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  220 bits (564), Expect = 1e-71
 Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 26/268 (9%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLH 70
           + EG+IA+VTGG  G+G    +     G  VVI         A A  +   +   V  + 
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV     +  L     ++  RLD+L NNAG          + +    +++ I+  N+ G
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPV---PLEEVTFEQWNGIVAANLTG 146

Query: 131 AALGMKYAAKVMVPR--RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           A L  ++A ++M  +  R G II+  S+++         YT +KHAI GLTK+TA +   
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRM 206

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
           + I    I     AT M           M +G      E   E  +              
Sbjct: 207 HDIACGQIDIGNAATDMT--------ARMSTGVLQANGEVAAEPTIP-----------IE 247

Query: 249 DIAEAALYLASD-ESKYISGHNLVVDGG 275
            IAEA +Y+AS   S  +    ++    
Sbjct: 248 HIAEAVVYMASLPLSANVLTMTVMATRM 275

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  221 bits (565), Expect = 2e-71
 Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 20/280 (7%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-----ALADSLLSSSPL 65
             L+GK+A +TG ARG G        + GA +V  D+              + L  +  L
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101

Query: 66  VTYL-------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
           V            DV     +Q +++  +++ G +DIL +N G+         +      
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS----NQGEVVSLTDQ 157

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
           ++ +I++ N+ GA    +     M+ R + G +I  +S   L G  G   Y  SKH + G
Sbjct: 158 QWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQG 217

Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL 237
           L  + A E+G++ IRVN ++P  V T M +N             P  E+     EL   L
Sbjct: 218 LMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED---AAELFSQL 274

Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             L    ++  D++ A  +LASDE++YI G  + VDGG  
Sbjct: 275 TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  219 bits (560), Expect = 3e-71
 Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 19/272 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           + GK+A++TG + GIG A    F K GA +V+           A SL     + V  +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+  + +  ++    S  G  DIL NNAG       +++I +    ++     + V  A
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGT----GSNETIMEAADEKWQFYWELLVMAA 120

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +     M  R  G II  AS+ ++        Y V+K A++  +K  A E+ K  I
Sbjct: 121 VRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
           RVNCI+P  + T   +   K         +  ++     +  ++ +A  +   +K     
Sbjct: 181 RVNCINPGLILTPDWIKTAK---------ELTKDNGGDWKGYLQSVA-DEHAPIKRFASP 230

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            ++A   ++L S+ + Y  G    VDGG   +
Sbjct: 231 EELANFFVFLCSERATYSVGSAYFVDGGMLKT 262

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  216 bits (553), Expect = 3e-70
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 45/284 (15%)

Query: 1   MNLNTEKKAYKT---LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD 57
           ++L TE   +++    + K+ ++TG ++GIG   VR +     +VV              
Sbjct: 11  VDLGTENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD- 69

Query: 58  SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                   +  +  D+S  +    ++   I + GR+D L NNAGV       K   +   
Sbjct: 70  --------IHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGV----FLAKPFVEMTQ 117

Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--GLGPHAYTVSKHAI 175
            ++D+ + +NV G     + AA  M+ + SG I+S  +        G+     +++K  +
Sbjct: 118 EDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGL 177

Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
             +T++ A E  + G+RVN +SP  + T M                       +    + 
Sbjct: 178 NAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH--------------------PAETHSTLA 217

Query: 236 GLANLK--GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           GL  +   G   + RD+ +A LYL  + + +I+G  L VDGG  
Sbjct: 218 GLHPVGRMG---EIRDVVDAVLYL--EHAGFITGEILHVDGGQN 256

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  216 bits (552), Expect = 6e-70
 Identities = 68/275 (24%), Positives = 109/275 (39%), Gaps = 31/275 (11%)

Query: 2   NLNTEKKAYKT---LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS 58
           +L TE   +++      KIAIVTG   G+G A        G  V +A     A    A  
Sbjct: 12  DLGTENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE 71

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
           +         +  DV+    ++ L   T+ K GR+D+LFNNAG          + D    
Sbjct: 72  I---GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAI---PMEDLTFA 125

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPR--RSGCIISTASVASLMGGLGPHAYTVSKHAIV 176
           ++  ++  N+ G  L  + A +VM  +  R G II+  S+++         YT +KHAI 
Sbjct: 126 QWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAIT 185

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
           GLTK+T+ +   + I    I      T M           M +G P  +   K+      
Sbjct: 186 GLTKSTSLDGRVHDIACGQIDIGNADTPMA--------QKMKAGVPQADLSIKV------ 231

Query: 237 LANLKGVTLKARDIAEAALYLASD-ESKYISGHNL 270
                   +    +A A +Y+AS      +    +
Sbjct: 232 -----EPVMDVAHVASAVVYMASLPLDANVQFMTI 261

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  214 bits (548), Expect = 2e-69
 Identities = 75/271 (27%), Positives = 114/271 (42%), Gaps = 29/271 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           ++ K+ I+TGG+ G+G+     F K GA+VVI              +      +  +  D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V    DIQ +I     K GR+DIL NNA      +      D   N ++++I I + G  
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAG----NFICPAEDLSVNGWNSVINIVLNGTF 119

Query: 133 LGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG-KYG 190
              +   K  +     G II+  +  +   G G      +K  ++ +TK  A E G KYG
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---R-GLANLKGVTLK 246
           IRVN I+P  +  +             D     EE  ++  + V   R G          
Sbjct: 180 IRVNAIAPGPIERTGG----------ADKLWISEEMAKRTIQSVPLGRLG---------T 220

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             +IA  A YL SDE+ YI+G  + +DGG  
Sbjct: 221 PEEIAGLAYYLCSDEAAYINGTCMTMDGGQH 251

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  213 bits (546), Expect = 7e-69
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 19/277 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-----IALADSLLSSSPLVT 67
            EGK A++TGGARG+G +      + GA + I D  + +      +A AD L  +  LV 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 68  YL-------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                      DV     +++ +       G +DI   NAG+         + + ++ ++
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS----TIALLPEVESAQW 123

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
           D +I  N+ G    +   A  M+ R  G I++ +S+          +Y  SK  ++GLTK
Sbjct: 124 DEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTK 183

Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL 240
             A +L  YGI VN ++P  + T M  N +       D  KP  ++ E +   +      
Sbjct: 184 CAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-- 241

Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               LK  ++  A L+L  + S +I+G  L +D G T
Sbjct: 242 -APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  212 bits (543), Expect = 2e-68
 Identities = 62/268 (23%), Positives = 103/268 (38%), Gaps = 28/268 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L  K+A +TGG  GIG     +F++HG   VIA       +  A  L  ++      L  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV     +   ++  + + GR+DIL N A   GN            N F  ++ I+  G 
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAA--GN--FLCPAGALSFNAFKTVMDIDTSGT 140

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               +   +       G I++  +     G         +K A+  +T++ A E G   I
Sbjct: 141 FNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNI 200

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----A 247
           RVN ++P  ++ +            +      +               +    L+     
Sbjct: 201 RVNSLAPGPISGTEG----------LRRLGGPQASLSTK---------VTASPLQRLGNK 241

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGG 275
            +IA + LYLAS  + Y++G  LV DGG
Sbjct: 242 TEIAHSVLYLASPLASYVTGAVLVADGG 269

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  211 bits (540), Expect = 3e-68
 Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 35/275 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK A+VTG ARG+G A        GA+V++ DI         D+L         +  D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E  I+   +   ++   +DIL NNAG+       K + + +   +  +I  N+  A 
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGI----QYRKPMVELELENWQKVIDTNLTSAF 122

Query: 133 LGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           L  + AAK M+ R S G II+  S+ S         YT +K  I  LT + A E  ++ I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-------GLANLKGVT 244
           + N I P  + T M  N                E+++    +         G        
Sbjct: 183 QTNAIGPGYILTDM--NT------------ALIEDKQFDSWVKSSTPSQRWG-------- 220

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            +  ++   A++L+S  S YI+G  + VDGG+   
Sbjct: 221 -RPEELIGTAIFLSSKASDYINGQIIYVDGGWLAV 254

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  211 bits (540), Expect = 3e-68
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 34/270 (12%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
             L GK  +VTG A GIG A + LF + GA +V  D ++        +L +       + 
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE---AIAVV 58

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS  + ++ +    + + GRL  + + AGV    +      +     ++ ++R+N+ G
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV----AHSALSWNLPLEAWEKVLRVNLTG 114

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           + L  + A +V+     G ++ T SVA  +G  G   Y   K  +VGL +  A EL + G
Sbjct: 115 SFLVARKAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKG 171

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTLKA 247
           +RVN + P  + T M           +          E+        R      G   + 
Sbjct: 172 VRVNVLLPGLIQTPMT--------AGLP-----PWAWEQEVGASPLGRA-----G---RP 210

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            ++A+AAL+L S+ES YI+G  L VDGG +
Sbjct: 211 EEVAQAALFLLSEESAYITGQALYVDGGRS 240

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  211 bits (539), Expect = 4e-68
 Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 27/267 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHC 71
            + K A+VTG +RG+G+A      ++G  +VI       A +  A+ +      V  +  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +V     I+ +        GRLD+  NNA         + + + +   +D  + IN +  
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAAS----GVLRPVMELEETHWDWTMNINAKAL 117

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + AAK+M     G I+S +S+ S+          VSK A+  LT+  A EL    I
Sbjct: 118 LFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQI 177

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTLKAR 248
            VN +S   + T  L +               E+  E   +     R          + +
Sbjct: 178 IVNAVSGGAIDTDALKHFPNR-----------EDLLEDARQNTPAGRM-----V---EIK 218

Query: 249 DIAEAALYLASDESKYISGHNLVVDGG 275
           D+ +   +L S ++  I G  ++VDGG
Sbjct: 219 DMVDTVEFLVSSKADMIRGQTIIVDGG 245

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  210 bits (537), Expect = 6e-68
 Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 48/271 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              K  +V GG+  +G   V+ F       +  D  +      +                
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS------------FTIK 67

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            S E++I+++I    SK  ++D     AG         + +D        +I +N+  A 
Sbjct: 68  DSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS---GGNASSDEFLKSVKGMIDMNLYSAF 124

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG--KYG 190
                 AK++   + G  + T + A+L    G  AY  +K A   + K+ A E G    G
Sbjct: 125 ASAHIGAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAG 182

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
                I P  + T                       +   ++                ++
Sbjct: 183 STSLGILPVTLDTPTNRKYM---------------SDANFDDWT-----------PLSEV 216

Query: 251 AEAAL-YLASDESKYISGHNLVVD--GGFTT 278
           AE    +  + +S+  +G  +  +     TT
Sbjct: 217 AEKLFEWSTNSDSRPTNGSLVKFETKSKVTT 247

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  212 bits (541), Expect = 9e-68
 Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 29/271 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
            +GK+A +TGG  G+G+    L    GA+ VIA        A A+ + S +   V  + C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV     +QN ++  I   G  +I+ NNA   GN            N +  I  I + G 
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAA--GN--FISPTERLSPNAWKTITDIVLNGT 139

Query: 132 ALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A       K ++  ++    +S  ++ +  G         +K  +  ++K+ A E GKYG
Sbjct: 140 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 199

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK---- 246
           +R N I P  + T                  P    E++M         +  +       
Sbjct: 200 MRFNVIQPGPIKTKGA----------FSRLDPTGTFEKEM---------IGRIPCGRLGT 240

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             ++A  A +L SD + +I+G  +  DGG  
Sbjct: 241 VEELANLAAFLCSDYASWINGAVIKFDGGEE 271

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  209 bits (535), Expect = 2e-67
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 37/278 (13%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTY 68
           +  L+GK  ++TG ++GIG AT RLF + GAKV +      A I     S+ +      +
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF 61

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
              D++  +  Q L++  ++K G +D+L NNAG L      K + + D   +D ++  N+
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLV---GRKPLPEIDDTFYDAVMDANI 118

Query: 129 RGAALGMKYAAKVMVPR-----RSGCIISTASVASLMGG-LGPHAYTVSKHAIVGLTKNT 182
           R   +  K+A   +        ++  +IST S+A   GG  G   Y  +K  +  + KN 
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNW 178

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
                K G+R N +SP  V T+   +               ++  +++           G
Sbjct: 179 VDFHTKDGVRFNIVSPGTVDTAFHADKT-------------QDVRDRI---------SNG 216

Query: 243 VTLK----ARDIAEAALYLASDE-SKYISGHNLVVDGG 275
           + +     A ++A A L+ AS   S YI+G  L ++GG
Sbjct: 217 IPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  209 bits (535), Expect = 2e-67
 Identities = 53/266 (19%), Positives = 87/266 (32%), Gaps = 27/266 (10%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
             AIVT      G  +     + G  V   D        L       +   TY       
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE------AFAETYPQLKPMS 55

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           EQ+   LI    S +G++D+L +N          + I  +   ++   +          +
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEF---QPIDKYAVEDYRGAVEALQIRPFALV 112

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
              A  M  R+SG II   S            YT ++     L    + ELG+Y I V  
Sbjct: 113 NAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFA 172

Query: 196 ISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK----ARDIA 251
           I P  + +                 +P +   E +  +       K   L+     +++ 
Sbjct: 173 IGPNYLHSEDS--------PYFYPTEPWKTNPEHVAHV------KKVTALQRLGTQKELG 218

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
           E   +LAS    Y++G    + GGF 
Sbjct: 219 ELVAFLASGSCDYLTGQVFWLAGGFP 244

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  209 bits (535), Expect = 3e-67
 Identities = 73/270 (27%), Positives = 112/270 (41%), Gaps = 29/270 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            EG  AIV+GGA G+GEATVR     G  VVIAD+    G ALAD L        ++  +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTN 84

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANEFDNIIRINVRGA 131
           V+ E  +   I            +  + G  +  +   +  +  D   F   I + + G 
Sbjct: 85  VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144

Query: 132 ALGMKYAAKVMVPRR------SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
               +  A  +           G ++ TAS+A   G +G  AY  +K  ++GLT   A +
Sbjct: 145 YNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARD 204

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           L   GIRVN I+P  + T ++                 EE   K    +     L G   
Sbjct: 205 LSSAGIRVNTIAPGTMKTPIM------------ESVG-EEALAKFAANIPFPKRL-G--- 247

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGG 275
              + A+AA +L ++   YI+G  + +DG 
Sbjct: 248 TPDEFADAAAFLLTNG--YINGEVMRLDGA 275

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  208 bits (532), Expect = 6e-67
 Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 37/277 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
              K  IVTGG RGIG A  R     GA V +     A  + + + +     +      C
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS    +   I    +  G +  L  NAGV    S  K  T+    +F  +  +NV G 
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGV----SVVKPATELTHEDFAFVYDVNVFGV 127

Query: 132 ALGMKYAAKVMVPR-RSGCIISTASVASLM-------GGLGPHAYTVSKHAIVGLTKNTA 183
               +  AK+ + + + G I+ T+S++S +       G L    Y  SK A   L K  A
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANL 240
            E    GIRVN +SP  V T               +    ++  +     +   R     
Sbjct: 188 AEWASAGIRVNALSPGYVNTDQ-------------TAHMDKKIRDHQASNIPLNRF---- 230

Query: 241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                +  ++   A+ L SD + Y++G    +DGG  
Sbjct: 231 -A---QPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  208 bits (532), Expect = 7e-67
 Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 36/274 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+ A+VTG   GIG A    + + GA V+     D     +AD +         +  D
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK-EVADEIADGGGSAEAVVAD 87

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++  +   N+    ++   R+D+L NNAG+           +     +  ++ +N+  A 
Sbjct: 88  LADLEGAANVAE-ELAATRRVDVLVNNAGI----IARAPAEEVSLGRWREVLTVNLDAAW 142

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +  +     M+   SG I++ AS+ S  GG    AY  SKHA+VGLT+  A E    G+ 
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR-------GLANLKGVTL 245
           VN ++P  V T+    A                ++E+  E+                   
Sbjct: 203 VNALAPGYVVTAN--TA------------ALRADDERAAEITARIPAGRWA--------- 239

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
              D+   A++LASD + Y+ G  L VDGG+  S
Sbjct: 240 TPEDMVGPAVFLASDAASYVHGQVLAVDGGWLAS 273

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  208 bits (531), Expect = 8e-67
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 24/270 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L G++A+VTGG+RG+G    +   + G  VV+A  +       A  L     +      C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS  ++++ L+     K G+LD + N AG+    ++     +F  +EF  +I +N+ G 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI----NRRHPAEEFPLDEFRQVIEVNLFGT 134

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSKHAIVGLTKNTACELGKYG 190
               + A  ++    +  II+  S+      +    AY  SK  +  LTK  A E G+YG
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV-RGLANLKGVTLKARD 249
           IRVN I+P    T M                    + EK++ ++ R      G      D
Sbjct: 195 IRVNVIAPGWYRTKM--TE------------AVFSDPEKLDYMLKRIPLGRTG---VPED 237

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTS 279
           +   A++LAS+E+KY++G  + VDGG+T +
Sbjct: 238 LKGVAVFLASEEAKYVTGQIIFVDGGWTAN 267

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  209 bits (533), Expect = 1e-66
 Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 32/274 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-----VT 67
           L+G++AIVTGGA GIG+A V+  ++ G+ VVIA        + AD L ++ P      V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            + C++  E+++ NL+  T+   G+++ L NN G               +  +  ++  N
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG----QFLSPAEHISSKGWHAVLETN 131

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           + G     K      +    G I++   V +  G         ++  +  LTK+ A E  
Sbjct: 132 LTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 190

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK- 246
             GIR+NC++P  + +   V  +         G   +   E            + +  K 
Sbjct: 191 CSGIRINCVAPGVIYSQTAVENY---------GSWGQSFFEGS---------FQKIPAKR 232

Query: 247 ---ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                +++    +L S  + +I+G ++ VDGG +
Sbjct: 233 IGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 266

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  208 bits (532), Expect = 1e-66
 Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 13/259 (5%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
              +G+ A+VTGGA GIG AT   F + GA++V++D+D  A     + L         + 
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV    ++  L +      G +D++F+NAG++        +   + +++  +I I++ G
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAG----PLAQMNHDDWRWVIDIDLWG 142

Query: 131 AALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           +   ++     ++ +   G I  TAS A L+   G   Y V+K+ +VGL +  A E+   
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           GI V+ + P  V T ++ N+ +         +  +       E   G    +  ++ A D
Sbjct: 203 GIGVSVLCPMVVETKLVSNSERI--------RGADYGMSATPEGAFGPLPTQDESVSADD 254

Query: 250 IAEAALYLASDESKYISGH 268
           +A            YI  H
Sbjct: 255 VARLTADAILANRLYILPH 273

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  207 bits (528), Expect = 2e-66
 Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 29/270 (10%)

Query: 2   NLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS 61
           +++ + K   +L G++A+VTG +RGIG A  R     GA+VV+   D     A+   +++
Sbjct: 16  HIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA 75

Query: 62  SSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFD 121
           +        CD+S    I       ++ HGR D+L NNAGV         +      E+D
Sbjct: 76  AGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGG---PLHTMKPAEWD 132

Query: 122 NIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKN 181
            +I +N++   L ++  A  M+  + G II+ +S+A         AYT SK  + GL  +
Sbjct: 133 ALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTS 192

Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK 241
            A EL ++ +RV+ ++P  V T                      ++  +           
Sbjct: 193 AAEELRQHQVRVSLVAPGSVRTEFG--------------VGLSAKKSALG---------- 228

Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLV 271
              ++  DIA+    LA+   +      LV
Sbjct: 229 --AIEPDDIADVVALLATQADQSFISEVLV 256

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  207 bits (528), Expect = 3e-66
 Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 35/275 (12%)

Query: 13  LEGKIAIVTG--GARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPL-VTY 68
           L+GK+ +VTG  G +G+G    R   + GA V I               L  +  +    
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             C V   +  + L+   ++  G++D    NAG     +    I D     +++++++++
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGA----TADSGILDGSVEAWNHVVQVDL 133

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACEL 186
            G     K        R +G ++ TAS++  +        +Y V+K   + + ++ A E 
Sbjct: 134 NGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW 193

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGV 243
             +  RVN ISP  + T +             S    +E ++    ++   R      G 
Sbjct: 194 RDF-ARVNSISPGYIDTGL-------------SDFVPKETQQLWHSMIPMGRD-----G- 233

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
              A+++  A +Y ASD S Y +G +L++DGG+TT
Sbjct: 234 --LAKELKGAYVYFASDASTYTTGADLLIDGGYTT 266

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  202 bits (517), Expect = 1e-64
 Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 39/275 (14%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT---- 67
           TL GK   +TG +RGIG A      + GA V IA     A   L  ++ S++  V     
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 68  ---YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
               L CD+  E  ++  +  T+   G +DIL NNA  +      +   D     FD + 
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI----WLRGTLDTPMKRFDLMQ 118

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-GLGPH-AYTVSKHAIVGLTKNT 182
           ++N RG+ +  +     ++   +  I++ A   SL     G H  YT++K  +  +T   
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGL 178

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
           A E G  G+ +N + P  V  +  +N      D     +P                    
Sbjct: 179 AAEFGPQGVAINALWPRTVIATDAINMLPG-VDAAACRRP-------------------- 217

Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                  +A+AA  + + E+    G  L+ D    
Sbjct: 218 -----EIMADAAHAVLTREAAGFHGQFLIDDEVLA 247

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  201 bits (514), Expect = 2e-64
 Identities = 53/264 (20%), Positives = 90/264 (34%), Gaps = 20/264 (7%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLV--TYLHCDV 73
            +  +TG A GIG A   L  + G  V+  D   A   A   +       V      C  
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
            L+  +        + +  L +  N  GV                +    + +    A  
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSA--LLDGLAEALSRGQQPAAVIVGSIAATQ 119

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
                  ++    +G       +A    G    AY  SK+A+  L +    +    G+R+
Sbjct: 120 PGAAELPMVEAMLAGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRL 178

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
           N ++P  V T +L  +                +    E   R +A L   + + R++AEA
Sbjct: 179 NVVAPGAVETPLLQASK--------------ADPRYGESTRRFVAPLGRGS-EPREVAEA 223

Query: 254 ALYLASDESKYISGHNLVVDGGFT 277
             +L   ++ +I G  L VDGG  
Sbjct: 224 IAFLLGPQASFIHGSVLFVDGGMD 247

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  200 bits (512), Expect = 2e-64
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 39/268 (14%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           + A+VTGG+RGIG A     V  G +V IA  +         ++         L  D+  
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV--------PLPTDLEK 54

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           + D + L+   +   G L +L + A V    +  K   +    E+  ++ +++  A L  
Sbjct: 55  D-DPKGLVKRALEALGGLHVLVHAAAV----NVRKPALELSYEEWRRVLYLHLDVAFLLA 109

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYGIRV 193
           + AA  M     G ++   SV +   G      AYT +K A++GLT+  A E  + GIRV
Sbjct: 110 QAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRV 169

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL----KARD 249
           N + P  V T                  P  +  E  E +         + +    +  +
Sbjct: 170 NLLCPGYVETEFT--------------LPLRQNPELYEPI------TARIPMGRWARPEE 209

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA  A  L  DE++Y++G  + VDGGF 
Sbjct: 210 IARVAAVLCGDEAEYLTGQAVAVDGGFL 237

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  199 bits (509), Expect = 1e-63
 Identities = 53/272 (19%), Positives = 89/272 (32%), Gaps = 36/272 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVV-IADIDDAAGIALADSLLSSSPLVTYLHC 71
           L  K  I      GIG  T R  VK   K   I D  +          ++    +T+   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 72  DVSLEQ-DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           DV++   + + L+     +   +DIL N AG+L            D ++ +  I IN  G
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------------DDHQIERTIAINFTG 110

Query: 131 AALGMKYAAKVMVPRRSG---CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
                         R+ G    I +  SV           Y+ SK A+V  T + A    
Sbjct: 111 LVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP 170

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             G+    I+P    T ++            +     + E ++ EL+     L   T  +
Sbjct: 171 ITGVTAYSINPGITRTPLV-----------HTFNSWLDVEPRVAELL-----LSHPTQTS 214

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
               +  +          +G    +D G   +
Sbjct: 215 EQCGQNFVKAIEANK---NGAIWKLDLGTLEA 243

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  200 bits (510), Expect = 2e-63
 Identities = 69/275 (25%), Positives = 115/275 (41%), Gaps = 36/275 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+IA+VTGG+RGIG+   +  ++ GA+V I   D  A    A   LS+      +  D
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTAT-RLSAYGDCQAIPAD 85

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA- 131
           +S E   + L         RLDIL NNAG     S   ++  +  + ++ ++++NV    
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGT----SWGAALESYPVSGWEKVMQLNVTSVF 141

Query: 132 ----ALGMKYAAKVMVPRRSGCIISTASVASLMG-GLGPHAYTVSKHAIVGLTKNTACEL 186
                L      +         +I+  SVA +   G   +AY  SK A+  L++  A EL
Sbjct: 142 SCIQQLL-PLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
               I VN I+P    + M  +                 + + +E           + + 
Sbjct: 201 VGEHINVNVIAPGRFPSRMTRHIA--------------NDPQALEAD------SASIPMG 240

Query: 247 ----ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                 ++A  A+ LA     Y++G+ + +DGGF 
Sbjct: 241 RWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFH 275

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  198 bits (506), Expect = 3e-63
 Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 21/264 (7%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADI--DDAAGIALADSLLSSSPLVTYLHCD 72
           GK+ +VTG +RGIG++ V +        V+  +   +A    L +          Y+  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR---FFYVVGD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ +  ++ L+N  +  HG++D L  NAGVL       ++ + D N +  +  IN     
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQ---NVNEIDVNAWKKLYDINFFSIV 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             +  A   +  + +G ++  +S A  M      AY  SK A+       A E  +  ++
Sbjct: 116 SLVGIALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVK 172

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
              ++P  V T M VN         ++  P     E+++       N     L +   A 
Sbjct: 173 AIAVAPGIVDTDMQVNIR-------ENVGPSSMSAEQLKMFRGLKEN--NQLLDSSVPAT 223

Query: 253 AALYLASDE-SKYISGHNLVVDGG 275
               LA       ++G  L  +  
Sbjct: 224 VYAKLALHGIPDGVNGQYLSYNDP 247

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  198 bits (506), Expect = 4e-63
 Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 31/274 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-IALADSLLSSSPLVTYL 69
           +    +  +V G  R IG A    F + GA VV+     A G       +         +
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             D++   +++  I+    K G +  L + AG L      K+I + D   +  ++ +N+ 
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLI---ARKTIAEMDEAFWHQVLDVNLT 120

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSKHAIVGLTKNTACELGK 188
              L  K A   M   + G I++ +S A   GG  G  AY  SK A++  T+  A E+G 
Sbjct: 121 SLFLTAKTALPKM--AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP 178

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV---RGLANLKGVTL 245
             IRVN + P  ++T+             D+     E  E++       R      G   
Sbjct: 179 -KIRVNAVCPGMISTTFH-----------DTFTK-PEVRERVAGATSLKRE-----G--- 217

Query: 246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
            + D+A    +LASD++ Y++G    ++GG   S
Sbjct: 218 SSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS 251

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  196 bits (502), Expect = 2e-62
 Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 27/272 (9%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI---ADIDDAAGIALADSLLSSSPLV 66
           Y  L+ K+ ++ GG + +G  T + F      +V+      D      L D L      V
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKV 65

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
                D+S E+++  L +    + G++DI  N  G +      K I +    EFD +  I
Sbjct: 66  ALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKV----LKKPIVETSEAEFDAMDTI 121

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           N + A   +K AAK M    +G II+ A+            Y  +K  +   T+  + EL
Sbjct: 122 NNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKEL 179

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
            K  I VN I+P  + TS                     E ++     +  A    +T K
Sbjct: 180 MKQQISVNAIAPGPMDTSFFYGQ----------------ETKESTAFHKSQAMGNQLT-K 222

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT 278
             DIA    +L +D   +I+G  +  +GG+TT
Sbjct: 223 IEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  197 bits (502), Expect = 2e-62
 Identities = 78/293 (26%), Positives = 121/293 (41%), Gaps = 45/293 (15%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADI 47
           +  +    A K L GK+A+ TG  RGIG        + GA VV+             A++
Sbjct: 7   ITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL 66

Query: 48  DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQS 107
                  +A            +  D+S   ++  L +  +S  G LD + +N+G+     
Sbjct: 67  KKLGAQGVA------------IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME---- 110

Query: 108 KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA 167
                 +     FD +  +N RG     +   K    RR G II T+S+A++M G+  HA
Sbjct: 111 VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHA 168

Query: 168 -YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE 226
            Y  SK A+ G  +  A + G  G+ VNCI+P GV T M              G P E+ 
Sbjct: 169 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI 228

Query: 227 EEKMEELV---R-GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           +E +  +    R G            DI  A   L  +ES++I+G  + + GG
Sbjct: 229 DEGLANMNPLKRIG---------YPADIGRAVSALCQEESEWINGQVIKLTGG 272

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  197 bits (503), Expect = 2e-62
 Identities = 67/275 (24%), Positives = 106/275 (38%), Gaps = 31/275 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYL 69
                 +AIVTGG RGIG    R     G  + I  I DA G+  +   L      V +L
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             D++     Q  ++  +++ GR+D L NNAG+           D     FD I+ +N+R
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGI--ASIVRDDFLDLKPENFDTIVGVNLR 142

Query: 130 GAALGMKYAAKVMV---PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           G     +   K M+    R S  II+  SV+++M       Y +SK  +   ++  A  L
Sbjct: 143 GTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRL 202

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
            + GI V  + P  + + M                        +     GL     V ++
Sbjct: 203 AETGIAVFEVRPGIIRSDMT---------------------AAVSGKYDGLIESGLVPMR 241

Query: 247 ----ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
                 DI      LA  +  + +G  +  DGG +
Sbjct: 242 RWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS 276

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  196 bits (501), Expect = 5e-62
 Identities = 69/285 (24%), Positives = 115/285 (40%), Gaps = 45/285 (15%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAGIALAD 57
            +LEGK+A+VTG  RGIG        + G KV++             A I      A   
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC- 83

Query: 58  SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                      +  +V + +DI  +    +   G+LDI+ +N+GV+        + D   
Sbjct: 84  -----------VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV----SFGHVKDVTP 128

Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIV 176
            EFD +  IN RG     + A K +     G +I   S+      +  HA Y+ SK AI 
Sbjct: 129 EEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE 186

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
              +  A ++    I VN ++P G+ T M     +      ++    E +E         
Sbjct: 187 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA------ 240

Query: 237 LANLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              ++   L+      DIA    +LAS++  +++G  + +DGG  
Sbjct: 241 ---VQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  195 bits (497), Expect = 9e-62
 Identities = 68/271 (25%), Positives = 106/271 (39%), Gaps = 32/271 (11%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYL 69
             L+G+  +VTGG +GIG     +F + GA V +A    A   A    L       V  +
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DVS       L    + + G +D++  NAGV         +      + + I  +NV 
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV----FPDAPLATMTPEQLNGIFAVNVN 121

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           G    ++     ++   SG ++ T+S+   + G  G   Y  +K A +G  +  A EL  
Sbjct: 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAP 181

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK-- 246
           + I VN I P  + T  L                 EE    M          + +     
Sbjct: 182 HKITVNAIMPGNIMTEGL--------LENG-----EEYIASM---------ARSIPAGAL 219

Query: 247 --ARDIAEAALYLASDESKYISGHNLVVDGG 275
               DI   A +LA+ E+ YI+G  + VDGG
Sbjct: 220 GTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  195 bits (497), Expect = 1e-61
 Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 56/296 (18%)

Query: 1   MNLNTEKKAYKT-LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------AD 46
           ++L TE   +++  +  + +VTGG+RGIG A  RL  + G +V +             A 
Sbjct: 11  VDLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAA 70

Query: 47  IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQ 106
           I ++ G A+A            +  DV    DI  + +    + GRLD L NNAG++   
Sbjct: 71  ITESGGEAVA------------IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYP 118

Query: 107 SKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS---GCIISTASVASLMGGL 163
            +   + +      + ++R+NV G+ L    A + M    S   G I++ +S+A+++G  
Sbjct: 119 QR---VDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA 175

Query: 164 GPHA-YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKP 222
             +  Y  SK AI   T   A E+   GIRVN + P  + T +             SG  
Sbjct: 176 TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLH-----------ASGGL 224

Query: 223 CEEEEEKMEELV---RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             +   +M   V   R      G      ++A+A LYL S  + Y++G  L V GG
Sbjct: 225 -PDRAREMAPSVPMQRA-----G---MPEEVADAILYLLSPSASYVTGSILNVSGG 271

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  194 bits (495), Expect = 2e-61
 Identities = 56/291 (19%), Positives = 99/291 (34%), Gaps = 72/291 (24%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
            I +++G A GIG AT ++    G ++V  DI DA                  +  D+S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLST 44

Query: 76  EQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            +  +  I   ++K    +D L   AG+                   N++ +N  GA   
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGP-----------QTKVLGNVVSVNYFGATEL 93

Query: 135 MKYAAKVMVPRRSGCIISTASVASLM----------------------------GGLGPH 166
           M      +        +  +SVAS                                 G  
Sbjct: 94  MDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153

Query: 167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE 226
           AY  SK+A+    +  A   G+ G+R+N I+P    T +L                  ++
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL--------------QD 199

Query: 227 EEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
               E + + +  +     +  ++A    +L S  + Y+ G  +V+DGG  
Sbjct: 200 PRYGESIAKFVPPMGRRA-EPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  193 bits (493), Expect = 3e-61
 Identities = 44/251 (17%), Positives = 81/251 (32%), Gaps = 25/251 (9%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           T       V G    IG    + F   G  V     +      L   + ++   +     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D   E ++   +N     H  L++   N G     + +  I +     F  +  +     
Sbjct: 64  DARNEDEVTAFLN-AADAHAPLEVTIFNVGA----NVNFPILETTDRVFRKVWEMACWAG 118

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            +  + +A++M+    G I  T + ASL GG G  A+  +K  +  + ++ A EL    I
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 192 RV-NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
            V + I   GV T+ +              +  +   +        L       +    +
Sbjct: 179 HVAHLIIDSGVDTAWV------------RERREQMFGKDALANPDLL-------MPPAAV 219

Query: 251 AEAALYLASDE 261
           A A   L    
Sbjct: 220 AGAYWQLYQQP 230

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  194 bits (495), Expect = 4e-61
 Identities = 60/274 (21%), Positives = 100/274 (36%), Gaps = 39/274 (14%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT---- 67
           +L GK   ++GG+RGIG A  +     GA V +          L  ++ +++  +     
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 68  ---YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNII 124
               +  D+     +   +  T+ + G +DI  NNA  +       SI +     FD + 
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI----NLGSIEEVPLKRFDLMN 121

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-LGPHAYTVSKHAIVGLTKNTA 183
            I VRG     +     M  R +  I++ +    L    L P  Y ++K+ +       A
Sbjct: 122 GIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIA 181

Query: 184 CELGKYGIRVNCISP-FGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
            EL   GI  N + P   VAT+ + N     E    S KP                    
Sbjct: 182 EELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKP-------------------- 221

Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                   A+AA  + +  S Y  G+ L+ +   
Sbjct: 222 -----EVYADAAYVVLNKPSSYT-GNTLLCEDVL 249

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  193 bits (492), Expect = 9e-61
 Identities = 68/269 (25%), Positives = 103/269 (38%), Gaps = 21/269 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              + A VTG + GIG A  R     G  V     D     A  D L ++   V    CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+   ++   +   + + G + IL N+AG     +      D D   + +++  N+ G  
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGR----NGGGETADLDDALWADVLDTNLTGVF 137

Query: 133 LGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
              +   +   M     G I++ AS     G +    YT SKH +VG TK+   EL K G
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK---- 246
           I VN + P  V T M     +        G   +E  E+             + L     
Sbjct: 198 ITVNAVCPGYVETPMAERVREGYAR--HWGVTEQEVHERF---------NAKIPLGRYST 246

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGG 275
             ++A    YL +D +  I+   L V GG
Sbjct: 247 PEEVAGLVGYLVTDAAASITAQALNVCGG 275

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  192 bits (491), Expect = 1e-60
 Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 42/292 (14%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADI 47
           +   +E      L+GK+A+VTG  RGIG A      + GAKVV+             ++I
Sbjct: 4   VENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI 63

Query: 48  DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQS 107
                 A+A            +  D+    +I  L +  ++  G LDI  +N+GV+    
Sbjct: 64  KALGSDAIA------------IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV---- 107

Query: 108 KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA 167
               + D    EFD +  +N RG     + A + +     G I+ T+S  S    +  H+
Sbjct: 108 SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHS 165

Query: 168 -YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE 226
            Y+ SK A+    +  + + G   I VN ++P G  T M             S       
Sbjct: 166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTA---- 221

Query: 227 EEKMEELVRGLANLK--GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
            E+ +++    + L   G     +D+A    +L S E ++++G  L +DGG 
Sbjct: 222 -EQRQQMAAHASPLHRNG---WPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  192 bits (491), Expect = 2e-60
 Identities = 69/278 (24%), Positives = 109/278 (39%), Gaps = 32/278 (11%)

Query: 4   NTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS 63
             E+K    L  +  +VTGG +GIG     +F + GA V +A        ++   L    
Sbjct: 30  PAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG 89

Query: 64  PL-VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDN 122
              V  +  DVS      +     +   G LD++  NAG+         +      +   
Sbjct: 90  AGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI----FPEARLDTMTPEQLSE 145

Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASV-ASLMGGLGPHAYTVSKHAIVGLTKN 181
           ++ +NV+G    ++     +     G +I T+S+   + G  G   Y  SK A +G  + 
Sbjct: 146 VLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRT 205

Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK 241
            A EL   G+ VN I P  + T  L          M      EE    M          +
Sbjct: 206 AAIELAPRGVTVNAILPGNILTEGL--------VDMG-----EEYISGM---------AR 243

Query: 242 GVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
            + +       DI   A +LA+DE+ YI+G  +VVDGG
Sbjct: 244 SIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  191 bits (487), Expect = 3e-60
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 13/269 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLH 70
           L+GK A+VTG   GIG+A     V  GA V+I    +         + +  P  ++  + 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+  EQ  Q++I     K+ ++DIL NN G+     +     D    ++  +  +N+  
Sbjct: 68  ADLGTEQGCQDVIE----KYPKVDILINNLGI----FEPVEYFDIPDEDWFKLFEVNIMS 119

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                +   K M+ R+ G +I  AS A++M       Y+ +K   + L+++ A       
Sbjct: 120 GVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTN 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           + VN I P    T  +     S     +     EE E++  +  R  + ++ +  +  +I
Sbjct: 180 VTVNTIMPGSTLTEGVETMLNSLYP--NEQLTIEEAEKRFMKENRPTSIIQRLI-RPEEI 236

Query: 251 AEAALYLASDESKYISGHNLVVDGGFTTS 279
           A    +L+S  S  I+G  L +DGG   S
Sbjct: 237 AHLVTFLSSPLSSAINGSALRIDGGLVRS 265

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  190 bits (486), Expect = 3e-60
 Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 25/268 (9%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           + L GK A+VTG A+GIG+A        GA V+++DI+     A A S+   +  +    
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIA--- 58

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S    ++ L     +  G +DIL NNA +        +  D D + +  II +N+ G
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASI----VPFVAWDDVDLDHWRKIIDVNLTG 114

Query: 131 AALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
             +  +     M    ++G +IS AS     G     AY  +K  ++G T+  A ELGKY
Sbjct: 115 TFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKY 174

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            I  N ++P  + +  +                   E     E+++ +    G   +   
Sbjct: 175 NITANAVTPGLIESDGV--------KASP-----HNEAFGFVEMLQAMKGK-G---QPEH 217

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA+   +LASD++++I+G  L VD G  
Sbjct: 218 IADVVSFLASDDARWITGQTLNVDAGMV 245

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  191 bits (487), Expect = 4e-60
 Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 21/271 (7%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
            T + ++A+VTG   GIG    R   K G +V +    +         L  +        
Sbjct: 18  ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 77

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV    +I+ L+   + ++G +D+L NNAG  G  +  + + D     + +++  N+ G
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LAD---ELWLDVVETNLTG 133

Query: 131 AALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
                K   K   M+ R +G I++ AS     G +    Y+ SKH +VG TK    EL +
Sbjct: 134 VFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 193

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK-- 246
            GI VN + P  V T M  +  +   D  +     EE  +++            V +   
Sbjct: 194 TGITVNAVCPGFVETPMAASVREHYSDIWEVST--EEAFDRI---------TARVPIGRY 242

Query: 247 --ARDIAEAALYLASDESKYISGHNLVVDGG 275
               ++AE   YL    +  ++   L V GG
Sbjct: 243 VQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  190 bits (484), Expect = 8e-60
 Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 32/271 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ ++ IVTG + G+G A  R+  + GA V+  D+   AG   A  L      V + + D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNAD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E D    +     + G +  L N AG    +           + F   + +N+ G  
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121

Query: 133 LGMKYAAKVMVPRR------SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
             ++ AA+VM           G I++TAS+A+  G +G  AY  SK  +  LT   A EL
Sbjct: 122 NMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAREL 181

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVT 244
            ++GIRV  I+P    T M+            +G P    ++  + L   +      G  
Sbjct: 182 ARFGIRVVTIAPGIFDTPMM------------AGMP----QDVQDALAASVPFPPRLG-- 223

Query: 245 LKARDIAEAALYLASDESKYISGHNLVVDGG 275
            +A + A    ++   E+  ++G  + +DG 
Sbjct: 224 -RAEEYAALVKHIC--ENTMLNGEVIRLDGA 251

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  190 bits (484), Expect = 2e-59
 Identities = 72/285 (25%), Positives = 112/285 (39%), Gaps = 37/285 (12%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSP-LVTY 68
             +E   A+VTG A+ IG A      + G +VVI       A ++LAD L          
Sbjct: 19  SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVV 78

Query: 69  LHCDVS----LEQDIQNLINVTISKHGRLDILFNNAGV------LGNQSKHKSITDFDAN 118
              D++    L    + +IN      GR D+L NNA        +    +  S       
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVP------RRSGCIISTASVASLMGGLGPHAYTVSK 172
           +   +I  N     L     A+            +  I++          +    Y + K
Sbjct: 139 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGK 198

Query: 173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE 232
           HA+VGLT++ A EL  YGIRVN ++P      + +                EEE++K   
Sbjct: 199 HALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG---------------EEEKDKWRR 243

Query: 233 LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            V  L   +     A  IA+A ++L S  ++YI+G  + VDGG +
Sbjct: 244 KV-PLGRREA---SAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  188 bits (481), Expect = 2e-59
 Identities = 70/280 (25%), Positives = 113/280 (40%), Gaps = 52/280 (18%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAGIALADS 58
               K+AIVTG +RGIG A        G  VVI               I+ A G AL   
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT-- 81

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                        DVS    ++ L        G +D+L NNAG++       +I +    
Sbjct: 82  ----------AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIM----PLTTIAETGDA 127

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
            FD +I +N++G    ++ AA+ +  R  G II+ ++    +       Y  +K  +  +
Sbjct: 128 VFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAM 185

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           T   + EL    I VN ++P   AT + +            GK      +++ +    LA
Sbjct: 186 THVLSKELRGRDITVNAVAPGPTATDLFLE-----------GKS-----DEVRDRFAKLA 229

Query: 239 NLK--GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
            L+  G     +DIA A  +LA  +  +++G  L  +GG 
Sbjct: 230 PLERLG---TPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  189 bits (482), Expect = 3e-59
 Identities = 64/287 (22%), Positives = 113/287 (39%), Gaps = 37/287 (12%)

Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSP-LV 66
           +++  E   A++TGGAR IG +      + G +VV+           L   L ++     
Sbjct: 5   SHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSA 64

Query: 67  TYLHCDVSLEQDI----QNLINVTISKHGRLDILFNNAGV-------LGNQSKHKSITDF 115
                D+SL   +    +++I+ +    GR D+L NNA          G+ +   +    
Sbjct: 65  VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKP 124

Query: 116 DANEFDNIIRINVRGAALGMKYAAKVMVP-----RRSGCIISTASVASLMGGLGPHAYTV 170
              +   +   N       ++  A+          R+  +++     + +   G   YT+
Sbjct: 125 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM 184

Query: 171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM 230
           +KHA+ GLT+  A EL    IRVN ++P        +                +E +E+ 
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---------------QETQEEY 229

Query: 231 EELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              V  L   +     A  IA+A  +L S ++ YI+G  L VDGG  
Sbjct: 230 RRKV-PLGQSEA---SAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  188 bits (480), Expect = 4e-59
 Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 36/274 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           ++G +A++TGGA G+G AT    V  GA  V+ D+ ++ G A A  L        +   D
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPAD 66

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQ--SKHKSITDFDANEFDNIIRINVRG 130
           V+ E+D+Q  + +   K GR+D+  N AG+         K        +F  ++ +N+ G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126

Query: 131 AALGMKYAAKVMV------PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
               ++  A  M         + G II+TASVA+  G +G  AY+ SK  IVG+T   A 
Sbjct: 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 186

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           +L   GIRV  I+P    T +L +               E+    +            V 
Sbjct: 187 DLAPIGIRVMTIAPGLFGTPLLTSL-------------PEKVCNFLA---------SQVP 224

Query: 245 LKAR--DIAE-AALYLASDESKYISGHNLVVDGG 275
             +R  D AE A L  A  E+ +++G  + +DG 
Sbjct: 225 FPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA 258

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  189 bits (483), Expect = 6e-59
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 18/266 (6%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL--LSSSPLVTY 68
           K   G+ A VTGGA G+G   VR  +  G KV IADI   +      +L    S P V  
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV+  +  +   +   ++ G + IL NNAGV    +  + I +   +++D ++ +N+
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGV----NLFQPIEESSYDDWDWLLGVNL 119

Query: 129 RGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
            G   G+      MV R      + G +++TAS+A+ +    P  Y  +K A+ GL+++ 
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
              L KY I V+ + P  V + +  +     +      KP ++   +       LA +  
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVER------LAGVHE 233

Query: 243 VTLKARDIAEAALYLASDESKYISGH 268
             ++   I    +        +I  H
Sbjct: 234 FGMEPDVIGARVIEAMKANRLHIFSH 259

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  187 bits (476), Expect = 9e-59
 Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 38/263 (14%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAK-------VVIADIDDAAGIALADSLLSSSPLVTY 68
            I ++TG  +GIG A    F +           +V++    A    ++    +   L   
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  D+S   D++ L    + ++G +D L NNAGV     +  +++D    +FD  +  N+
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGV----GRFGALSDLTEEDFDYTMNTNL 118

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           +G     +    +M  + SG I    SVA+         Y +SK    GL +       K
Sbjct: 119 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 178

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
             +R+  + P  V T M              GK  +E +  M              +   
Sbjct: 179 CNVRITDVQPGAVYTPMW-------------GKVDDEMQALM--------------MMPE 211

Query: 249 DIAEAALYLASDESKYISGHNLV 271
           DIA   +      S+ +    ++
Sbjct: 212 DIAAPVVQAYLQPSRTVVEEIIL 234

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  187 bits (477), Expect = 1e-58
 Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 33/266 (12%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           TL     ++TG ++ +G       ++HG +V+I+   + A       L  +      L+ 
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS---VTELRQAG--AVALYG 78

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D S E  I   I++  ++   L  + +NA         ++  +     F  +  +++   
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASE----WLAETPGEEAD-NFTRMFSVHMLAP 133

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            L   +   ++       I+  +   +  G     AY  +K  +  LT + A       +
Sbjct: 134 YLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LV 192

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           +VN I+P  +                      +++       +   A L      A  I 
Sbjct: 193 KVNGIAPALLMFQP------------------KDDAAYRANALAKSA-LGIEP-GAEVIY 232

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
           ++  YL    S Y++G  L V+GG  
Sbjct: 233 QSLRYLLD--STYVTGTTLTVNGGRH 256

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  186 bits (475), Expect = 2e-58
 Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 19/265 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           + G++ +VTG +RGIG        K GA V I          +A    S       + CD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62

Query: 73  VSLEQDIQNLIN-VTISKHGRLDILFNNAGVLGNQ---SKHKSITDFDANEFDNIIRINV 128
            S E ++++L   V   + GRLD+L NNA         +++K+  +  A+ +D+I  + +
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           RG      Y A++MVP   G I+  +S  S +  +    Y V K A   L  + A EL +
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHELRR 181

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
           +G+    + P  V T +L                  +EE   + +++   +         
Sbjct: 182 HGVSCVSLWPGIVQTELLKEHM-------------AKEEVLQDPVLKQFKSAFSSAETTE 228

Query: 249 DIAEAALYLASDE-SKYISGHNLVV 272
              +  + LA+D     +SG  L  
Sbjct: 229 LSGKCVVALATDPNILSLSGKVLPS 253

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  187 bits (478), Expect = 2e-58
 Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 55/281 (19%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVI--------------ADIDDAAGIALADS 58
           L+ + A+VTGG  GIG A    + + GA V I              A I++    A+   
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVL-- 104

Query: 59  LLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
                     L  D+S E   ++L++      G LDIL   AG    Q+    I D  + 
Sbjct: 105 ----------LPGDLSDESFARSLVHKAREALGGLDILALVAGK---QTAIPEIKDLTSE 151

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           +F     +NV       + A  ++   +   II+T+S+ +         Y  +K AI+  
Sbjct: 152 QFQQTFAVNVFALFWITQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNY 209

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
           ++  A ++ + GIRVN ++P  + T++ +            G+     ++K+ +      
Sbjct: 210 SRGLAKQVAEKGIRVNIVAPGPIWTALQI----------SGGQT----QDKIPQFG---- 251

Query: 239 NLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
             +   +K      ++A   +YLAS ES Y++     V GG
Sbjct: 252 --QQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  186 bits (476), Expect = 2e-58
 Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 55/283 (19%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAGIALAD 57
            +L GK A VTGG+RGIG A  +     GA V +             ++I+ A G A+A 
Sbjct: 27  ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA- 85

Query: 58  SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
                      +  D    + I+  I  T+   G LDIL N+AG+         + +   
Sbjct: 86  -----------IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW----HSAPLEETTV 130

Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS-VASLMGGLGPHAYTVSKHAIV 176
            +FD ++ +N R   + ++ A++ +     G II+  S +A L+   G   Y+ SK A+ 
Sbjct: 131 ADFDEVMAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALA 188

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
           GLTK  A +LG  GI VN + P    T M                    + +  E     
Sbjct: 189 GLTKGLARDLGPRGITVNIVHPGSTDTDMN-----------------PADGDHAEAQRER 231

Query: 237 LANLK--GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
           +A     G   + +DIA    +LA  + K+++G +L +DGG  
Sbjct: 232 IA-TGSYG---EPQDIAGLVAWLAGPQGKFVTGASLTIDGGAN 270

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  185 bits (473), Expect = 2e-58
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 43/270 (15%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            E +  +V GG   +G   V+ F      V   D+ +    + +  +         +   
Sbjct: 5   GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK--------MTDS 56

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            + + D        +    ++D +   AG     +   + +       D + + ++  + 
Sbjct: 57  FTEQADQVTAEVGKLLGDQKVDAILCVAGG---WAGGNAKSKSLFKNCDLMWKQSIWTST 113

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG--KYG 190
           +    A K +  +  G +    + A+L G  G   Y ++K A+  L ++ A +      G
Sbjct: 114 ISSHLATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG 171

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
                + P  + T M   +                 E                      +
Sbjct: 172 AAAIAVLPVTLDTPMNRKSM---------------PEADFSSWT-----------PLEFL 205

Query: 251 AEAALYLASDESKYISGHNLVV--DGGFTT 278
            E      +   +  SG  + V    G T 
Sbjct: 206 VETFHDWITGNKRPNSGSLIQVVTTDGKTE 235

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  185 bits (473), Expect = 6e-58
 Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 44/286 (15%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           ++ N ++  Y   E K+A+VTG  RGIG    ++  K  + V+       +  ++ D + 
Sbjct: 30  LSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK 89

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA--- 117
           S     +    DVS +++I  +IN  +++H  +DIL NNAG          IT  D    
Sbjct: 90  SFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAG----------ITR-DNLFL 138

Query: 118 ----NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH 173
               +E+++++R N+       +  +K M+  R G II+ +S+  L G +G   Y+ SK 
Sbjct: 139 RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA 198

Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL 233
            ++G TK+ A EL    I VN I+P  +++ M             + K  E+ ++ +   
Sbjct: 199 GVIGFTKSLAKELASRNITVNAIAPGFISSDM-------------TDKISEQIKKNI--- 242

Query: 234 VRGLANLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                 +  +         ++A  A +L+SD+S YI+G   V+DGG
Sbjct: 243 ------ISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  182 bits (464), Expect = 5e-57
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 50/274 (18%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K  ++TG A GIG AT+ LF K GA++V  DI++      A+++ +       +  D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-----VVMD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNIIR 125
           V+    ++      ++  GRLD + + AG          IT  D         +++ ++R
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAG----------ITR-DNFHWKMPLEDWELVLR 106

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           +N+ G+ L  K A++ M  +  G I+ TAS    +G LG   Y  S   +VGLT+  A E
Sbjct: 107 VNLTGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALE 165

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           LG++GIRVN ++P  + T M           +      E+  EK          +    L
Sbjct: 166 LGRWGIRVNTLAPGFIETRMT--------AKVP-----EKVREKA---------IAATPL 203

Query: 246 K----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                  ++A AAL+L SDES +I+G  L VDGG
Sbjct: 204 GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  182 bits (465), Expect = 7e-57
 Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 31/271 (11%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLH 70
               + A++T G +G+G+      +  G  V +    D  A   + ++       + ++ 
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+ ++D+  ++   +S  G++D L NNAG      + K + D++ +E++ +I+ N+  
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF--ERKKLVDYEEDEWNEMIQGNLTA 121

Query: 131 AALGMKYAAKVMVPRRSGCII--STASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
               +K    VM  +  G II        S  G +   A+  +K  +V LTK  A E  +
Sbjct: 122 VFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAE 181

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK-- 246
           YGI  N + P  +   M         +        +E  +                +   
Sbjct: 182 YGITANMVCPGDIIGEMK--------EATI-----QEARQLK---------EHNTPIGRS 219

Query: 247 --ARDIAEAALYLASDESKYISGHNLVVDGG 275
               DIA    +L  D+S  I+G  + V G 
Sbjct: 220 GTGEDIARTISFLCEDDSDMITGTIIEVTGA 250

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  180 bits (459), Expect = 2e-56
 Identities = 40/265 (15%), Positives = 88/265 (33%), Gaps = 36/265 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           +     IVTG   G+G A     V+ G +V +              L ++   V  +  D
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNA---VIGIVAD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++  +D+       +   G  +++ + AG      +   +  + A +   ++  N+    
Sbjct: 58  LAHHEDVDVAFAAAVEWGGLPELVLHCAGT----GEFGPVGVYTAEQIRRVMESNLVSTI 113

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  +   +++   R G + +  S A+ +G      Y  SK  + G  ++   EL    +R
Sbjct: 114 LVAQQTVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLR 172

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           +  + P G+ +                      +                  +   D A 
Sbjct: 173 LVNLYPSGIRSEFW-------------DNTDHVDPSGF--------------MTPEDAAA 205

Query: 253 AALY-LASDESKYISGHNLVVDGGF 276
             L  L +  S +++   +  + G 
Sbjct: 206 YMLDALEARSSCHVTDLFIGRNEGH 230

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  180 bits (460), Expect = 2e-56
 Identities = 56/252 (22%), Positives = 94/252 (37%), Gaps = 34/252 (13%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL---VTY 68
             +  +AI+TG ++GIG          G +VV+          + D ++ S+        
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           L  D++        I     K+G +DIL N A  +          D     F  I+ INV
Sbjct: 64  LPLDITDCTKADTEIKDIHQKYGAVDILVNAAA-MFMDGSLSEPVD----NFRKIMEINV 118

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
                 +K   ++M  +++G I + AS A+  G      Y  +K A++GL ++   EL  
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            GIRV  + P  V T M   A                ++E+M              ++  
Sbjct: 179 LGIRVTTLCPGWVNTDMAKKAGT------------PFKDEEM--------------IQPD 212

Query: 249 DIAEAALYLASD 260
           D+      L + 
Sbjct: 213 DLLNTIRCLLNL 224

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  180 bits (460), Expect = 3e-56
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 53/291 (18%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL-------LSSS 63
             L   +A+VTG   GIG A        GA V   D+D AA       L           
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 64  PLVTYLHCDVSLEQDIQNLINVTISKHGR-LDILFNNAGVLGNQSKHKSITDFDA----- 117
                   DVS  +  + L+    +   R   ++ + AG          IT  D      
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG----------ITQ-DEFLLHM 111

Query: 118 --NEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYTVSKHA 174
             +++D +I +N++G  L  + AA+ +V     G II+ +S+   +G +G   Y  SK  
Sbjct: 112 SEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAG 171

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV 234
           ++GLT+  A ELG++GIR N + P  +AT M           +      ++  +K+    
Sbjct: 172 VIGLTQTAARELGRHGIRCNSVLPGFIATPMT--------QKVP-----QKVVDKI---- 214

Query: 235 RGLANLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN 281
                 + + +       D+A+   +LAS++S YI+G ++ V GG   ++N
Sbjct: 215 -----TEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN 260

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  181 bits (461), Expect = 3e-56
 Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 42/275 (15%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           KTL+ ++AIVTG +RGIG A      + GA V+     +A    +  +   +        
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT-D-----FDANEFDNII 124
            +V+    +  L+  T+ + G L++L NNAG          IT D        +E+D +I
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAG----------ITQDQLAMRMKDDEWDAVI 133

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             N++      +   + M+  R G I++  SV    G  G   Y  +K  + G+T+  A 
Sbjct: 134 DTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAR 193

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           E+G  GI VNC++P  + T M             +    +E++  +            + 
Sbjct: 194 EIGSRGITVNCVAPGFIDTDM-------------TKGLPQEQQTAL---------KTQIP 231

Query: 245 LK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
           L       DIA A  +LAS ++ YI+G  L V+GG
Sbjct: 232 LGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  179 bits (458), Expect = 5e-56
 Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 44/275 (16%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           +L  K+A+VTG +RGIG          GA VV      A+     +S+         L  
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNII 124
           ++S  + IQN      +++  +DIL NNAG          IT  D        +E+ ++I
Sbjct: 62  NISDIESIQNFFAEIKAENLAIDILVNNAG----------ITR-DNLMMRMSEDEWQSVI 110

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             N+       K   + M+ +R G IIS  SV    G  G   Y  +K  ++G +K+ A 
Sbjct: 111 NTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAY 170

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           E+    I VN ++P  +AT M             + K  +E++  +            + 
Sbjct: 171 EVASRNITVNVVAPGFIATDM-------------TDKLTDEQKSFI---------ATKIP 208

Query: 245 LK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                  +DIA A  +LAS+E+KYI+G  L V+GG
Sbjct: 209 SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  180 bits (458), Expect = 7e-56
 Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 30/281 (10%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           M+L         ++GK+A+VT G+ G+G A+     ++GA++++   +     A A  + 
Sbjct: 1   MDLG--------IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIA 52

Query: 61  SSSP--LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDAN 118
           S      V  +  D+    DI  L        G  DIL  + G      +     +    
Sbjct: 53  SLVSGAQVDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGG----PRPGRFMELGVE 107

Query: 119 EFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGL 178
           ++D   R+  R A    + AA+ MV +  G ++   SV  L          + +  ++G+
Sbjct: 108 DWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGV 167

Query: 179 TKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA 238
            +  A EL  +G+ VN + P  + T  + +  +       SG   EE  + M        
Sbjct: 168 VRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR--RSGITVEEALKSMA------- 218

Query: 239 NLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
               + +       ++A    +LAS+++ +I+G  + VDGG
Sbjct: 219 --SRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  179 bits (457), Expect = 7e-56
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 45/275 (16%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHC 71
           L+GK AIVTG +RG+G+A        GA +V+       +  A A+   ++   V     
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNII 124
           DV   +D++N++   +   GR+DIL NNAG          IT  D         ++D+++
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAG----------ITR-DTLMLKMSEKDWDDVL 111

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             N++ A L  K  +K+M+ ++SG II+  S+A ++G  G   Y  SK  ++G TK+ A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           E    GI  N ++P  + T M         D +      ++ +E           L  + 
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMT--------DVLP-----DKVKEMY---------LNNIP 209

Query: 245 LK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
           LK      ++A    +LASD+S YI+G  + +DGG
Sbjct: 210 LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  179 bits (456), Expect = 3e-55
 Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 55/280 (19%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID---DAA----------GIALADSL 59
           L+GK  ++TGG  GIG A    F K GA + IA +D   DA              +    
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL--- 101

Query: 60  LSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE 119
                    L  D+S EQ  ++++  T+ + G L+IL NN      Q   + +    A +
Sbjct: 102 ---------LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ---QYPQQGLEYITAEQ 149

Query: 120 FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
            +   RIN+       K A   +  ++   II+TAS+ +  G      Y+ +K AIV  T
Sbjct: 150 LEKTFRINIFSYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFT 207

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           ++ +  L + GIRVN ++P  + T +           + S       E+K+ +       
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPL-----------IPSSFD----EKKVSQF------ 246

Query: 240 LKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
              V ++      ++A A +YLAS +S Y++G  + V+GG
Sbjct: 247 GSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGG 286

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  177 bits (450), Expect = 5e-55
 Identities = 50/268 (18%), Positives = 93/268 (34%), Gaps = 46/268 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           +     IV GG   +G A +  F K+G  V+  D+        ADS +        +  +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN---DQADSNIL-------VDGN 50

Query: 73  VSLEQDIQNLINVTIS--KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            +  +  Q+++  T S  +  ++D +F  AG     +   + +       D +I+ +V  
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGG---WAGGSASSKDFVKNADLMIKQSVWS 107

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY- 189
           +A+  K A   +  +  G +  T + A++        Y ++K A+  LT + A +     
Sbjct: 108 SAIAAKLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLP 165

Query: 190 -GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
               V  I P  + T M    W    D                                 
Sbjct: 166 DNSAVLTIMPVTLDTPM-NRKWMPNADHSSWTPLSF------------------------ 200

Query: 249 DIAEAALYLASD-ESKYISGHNLVVDGG 275
            I+E  L   ++  S+  SG  L +   
Sbjct: 201 -ISEHLLKWTTETSSRPSSGALLKITTE 227

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  176 bits (450), Expect = 7e-55
 Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 45/277 (16%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYL 69
             L+GK+++VTG  RGIG A        G+ V+I         A+A+ + +   +    +
Sbjct: 3   IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDN 122
             ++  E+ I        +    +DIL NNAG          IT  D         +++ 
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAG----------ITR-DKLFLRMSLLDWEE 111

Query: 123 IIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNT 182
           ++++N+ G  L  + + + M+ +R G I++ +SV    G +G   Y+ +K  ++G TK+ 
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSL 171

Query: 183 ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
           A EL    + VN ++P  + T M             +    EE ++K           + 
Sbjct: 172 AKELAPRNVLVNAVAPGFIETDM-------------TAVLSEEIKQKY---------KEQ 209

Query: 243 VTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
           + L       ++A   L+L S+ + YI+G  + V+GG
Sbjct: 210 IPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  176 bits (450), Expect = 8e-55
 Identities = 90/275 (32%), Positives = 134/275 (48%), Gaps = 45/275 (16%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHC 71
           L+GK+A+VTG +RGIG A      K GA VV+    ++     + D +         +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNII 124
           DV+  +D+ N++  T+   G++DIL NNAG          +T  D         E+D +I
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAG----------VTK-DNLLMRMKEEEWDTVI 110

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             N++G  L  K  ++ M+ +R G I++ ASV  + G  G   Y  +K  ++GLTK +A 
Sbjct: 111 NTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAK 170

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           EL    I VN I+P  +AT M         D +D     E  + +M         LK + 
Sbjct: 171 ELASRNITVNAIAPGFIATDMT--------DVLD-----ENIKAEM---------LKLIP 208

Query: 245 LK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                 A+DIA A  + ASD+SKYI+G  L VDGG
Sbjct: 209 AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  176 bits (449), Expect = 1e-54
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 45/275 (16%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHC 71
              K A+VTG +RGIG +      + G  V +          A+ + + +       +  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNII 124
           +V+   +++ +I   +S+ G LD+L NNAG          IT  D         E+D++I
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAG----------ITR-DNLLMRMKEQEWDDVI 110

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             N++G    ++ A   M+ +RSG II+ +SV   +G  G   Y  +K  ++GLTK+ A 
Sbjct: 111 DTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAR 170

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           EL   GI VN ++P  + + M         D +      +E +E+M         L  + 
Sbjct: 171 ELASRGITVNAVAPGFIVSDMT--------DALS-----DELKEQM---------LTQIP 208

Query: 245 LK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
           L       DIA    +LASD++KYI+G  + V+GG
Sbjct: 209 LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  175 bits (445), Expect = 6e-54
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 47/274 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+ A+VTG   GIGEA  R F   GA V +    +     +A  L      V     +
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSAN 81

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNIIR 125
           +S  + I+ L  V   +   +DIL NNAG          IT  D         ++D+++ 
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVNNAG----------ITR-DGLFVRMQDQDWDDVLA 130

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           +N+  A+   +     M+ RR G II+  S+  ++G  G   Y  +K  ++G +K  A E
Sbjct: 131 VNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQE 190

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           +    I VNCI+P  + ++M             + K  E+++E +         +  + +
Sbjct: 191 IASRNITVNCIAPGFIKSAM-------------TDKLNEKQKEAI---------MAMIPM 228

Query: 246 K----ARDIAEAALYLASDESKYISGHNLVVDGG 275
           K      +IA A +YLASDE+ Y++G  L ++GG
Sbjct: 229 KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  174 bits (444), Expect = 7e-54
 Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 47/274 (17%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEGK+A+VTG +RGIG+A   L  + GAKV+     ++   A++D L         +  +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMALN 63

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNIIR 125
           V+  + I+ ++     + G +DIL NNAG          IT  D         E+ +I+ 
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAG----------ITR-DNLLMRMKEEEWSDIME 112

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
            N+       K   + M+ +R G II+  SV   MG  G   Y  +K  ++G TK+ A E
Sbjct: 113 TNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 172

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           +   G+ VN ++P  + T M             +    +E+             L  V  
Sbjct: 173 VASRGVTVNTVAPGFIETDM-------------TKALNDEQRTAT---------LAQVPA 210

Query: 246 K----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                 R+IA A  +LAS E+ YI+G  L V+GG
Sbjct: 211 GRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  175 bits (446), Expect = 3e-53
 Identities = 62/283 (21%), Positives = 102/283 (36%), Gaps = 45/283 (15%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           M  NT +     L G    +TG +RGIG+A      K GA +VIA         L  ++ 
Sbjct: 36  MLPNTGR-----LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIY 90

Query: 61  SSSPLVT-------YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSIT 113
           +++  +            DV  EQ I   +   I K G +DIL NNA  +       +  
Sbjct: 91  TAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI----SLTNTL 146

Query: 114 DFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL--GPHAYTVS 171
           D      D ++ +N RG  L  K     +   +   I++ +   +L         AYT++
Sbjct: 147 DTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIA 206

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME 231
           K+ +       A E  K  I VN + P     +  ++                     +E
Sbjct: 207 KYGMSMYVLGMAEEF-KGEIAVNALWPKTAIHTAAMDML---------------GGPGIE 250

Query: 232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG 274
              R          K   IA+AA  +     K  +G+ ++ + 
Sbjct: 251 SQCR----------KVDIIADAAYSIFQK-PKSFTGNFVIDEN 282

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  172 bits (439), Expect = 4e-53
 Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           +   +A+VTGGA G+G AT +  +  GA+VV+ DI    G  +   L        +   D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADL---GDRARFAAAD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E  + + ++      G L I+ N AG             F    F  I+ IN+ G+ 
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119

Query: 133 LGMKYAAKVMV--------PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
             ++ AA+ +             G II+TASVA+  G +G  AY+ SK  +VG+T   A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--G 242
           +L  + IRV  I+P    T +L            +  P    EE    L + + +    G
Sbjct: 180 DLASHRIRVMTIAPGLFDTPLL------------ASLP----EEARASLGKQVPHPSRLG 223

Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                 +    A+++   E+  ++G  + +DG 
Sbjct: 224 ---NPDEYGALAVHII--ENPMLNGEVIRLDGA 251

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  172 bits (439), Expect = 7e-53
 Identities = 54/202 (26%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K++ G+I ++TG   GIG  T   F K  +K+V+ DI+       A         V    
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D S  +DI +      ++ G + IL NNAGV+        +      + +    +NV  
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV----YTSDLFATQDPQIEKTFEVNVLA 142

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL---G 187
                K     M     G I++ AS A  +      AY  SK A VG  K    EL    
Sbjct: 143 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 202

Query: 188 KYGIRVNCISPFGVATSMLVNA 209
             G++  C+ P  V T  + N 
Sbjct: 203 ITGVKTTCLCPNFVNTGFIKNP 224

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  171 bits (436), Expect = 1e-52
 Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 57/288 (19%)

Query: 9   AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAGIAL 55
           A   L+GK+A+VTG +RGIG A  +     GA V I              +I    G A 
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60

Query: 56  ADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK------HGRLDILFNNAGVLGNQSKH 109
           +            +  ++     ++ L +   ++        + DIL NNAG+       
Sbjct: 61  S------------IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI----GPG 104

Query: 110 KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT 169
             I +     FD ++ +N +     ++ A   +  R +  II+ +S A+ +      AY+
Sbjct: 105 AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYS 162

Query: 170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK 229
           ++K AI  +T   A +LG  GI VN I P  V T M                     +  
Sbjct: 163 MTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL---------------LSDPM 207

Query: 230 MEELVRGLANLK--GVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
           M++    ++     G   +  DIA+ A +LAS +S++++G  + V GG
Sbjct: 208 MKQYATTISAFNRLG---EVEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  171 bits (435), Expect = 4e-52
 Identities = 60/307 (19%), Positives = 105/307 (34%), Gaps = 64/307 (20%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAG---IA 54
                 +A+VTG A+ +G +        G  V +             A ++       I 
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 55  L-AD--SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV-----LGNQ 106
           + AD  ++ ++          V+L      L+    +  GR D+L NNA       L   
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 107 S-----KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP------RRSGCIISTAS 155
                       +       ++   N       +K  A  +          +  II+   
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 156 VASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCED 215
             +    LG   YT++K A+ GLT++ A EL    IRVN + P G  + +          
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVL---------- 232

Query: 216 CMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR-----DIAEAALYLASDESKYISGHNL 270
                       E              V L  R     ++++  ++L S ++KYI+G  +
Sbjct: 233 ---VDDMPPAVWEGH---------RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCV 280

Query: 271 VVDGGFT 277
            VDGG++
Sbjct: 281 KVDGGYS 287

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  169 bits (431), Expect = 4e-52
 Identities = 65/268 (24%), Positives = 109/268 (40%), Gaps = 42/268 (15%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           + A+VTGGA G+G A        G +VV+ D+       +            Y+  DV+ 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI------------YVEGDVTR 50

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E+D++  +     +   L  + + AGV   +             F  ++ +N+ G    +
Sbjct: 51  EEDVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 136 KYAAKVMV------PRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           + AA  M         + G I++TASVA+  G +G  AY  SK  +V LT   A EL  +
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKA 247
           GIRV  ++P    T +L             G P    E+    L   +      G   + 
Sbjct: 170 GIRVVTVAPGLFDTPLL------------QGLP----EKAKASLAAQVPFPPRLG---RP 210

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGG 275
            + A   L++   E+  ++G  + +DG 
Sbjct: 211 EEYAALVLHIL--ENPMLNGEVVRLDGA 236

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  169 bits (431), Expect = 4e-52
 Identities = 66/286 (23%), Positives = 111/286 (38%), Gaps = 55/286 (19%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           M     + A      +  +VTGG RGIG A  +     G KV +      A   L     
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG--- 57

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA--- 117
                   +  DV+    +           G +++L +NAG          ++  DA   
Sbjct: 58  --------VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG----------LSA-DAFLM 98

Query: 118 ----NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH 173
                +F+ +I  N+ GA    + A++ M   + G +I   SV+ L G      Y  SK 
Sbjct: 99  RMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 158

Query: 174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL 233
            ++G+ ++ A EL K  +  N ++P  + T M           +D     E  ++     
Sbjct: 159 GVIGMARSIARELSKANVTANVVAPGYIDTDMT--------RALD-----ERIQQGA--- 202

Query: 234 VRGLANLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                 L+ +  K      ++A    +LAS+++ YISG  + VDGG
Sbjct: 203 ------LQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  170 bits (432), Expect = 6e-52
 Identities = 85/279 (30%), Positives = 131/279 (46%), Gaps = 55/279 (19%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHC 71
           L  +IA+VTG +RGIG A        GAKV +       A   +  ++ ++      +  
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNII 124
           DVS E +++ L    I + GRLD+L NNAG          IT  D        +++ +++
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAG----------ITR-DTLLLRMKRDDWQSVL 134

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
            +N+ G  L  + AAK+M+ +RSG II+ ASV   MG  G   Y+ +K  ++GLTK  A 
Sbjct: 135 DLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAK 194

Query: 185 ELGKYGIRVNCISPFGVATSM---LVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK 241
           EL   GI VN ++P  +AT M   L                     EK+         L+
Sbjct: 195 ELASRGITVNAVAPGFIATDMTSELA-------------------AEKL---------LE 226

Query: 242 GVTLK----ARDIAEAALYLASD-ESKYISGHNLVVDGG 275
            + L     A ++A    +LA+D  + YI+G  + +DGG
Sbjct: 227 VIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG 265

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  169 bits (431), Expect = 6e-52
 Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 51/274 (18%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK +++TG + GIG A  RL  K G+KV+I+  ++    +L ++L       T   C+
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCN 68

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNIIR 125
           ++ +++  NLI+    K   LDIL  NAG          IT  D         +FD +I 
Sbjct: 69  LANKEECSNLIS----KTSNLDILVCNAG----------ITS-DTLAIRMKDQDFDKVID 113

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           IN++   +  + A K M+ +R G II+ +S+  + G  G   Y  SK  ++G+TK+ + E
Sbjct: 114 INLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYE 173

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           +   GI VN ++P  + + M             + K  E++ E +         ++ + L
Sbjct: 174 VATRGITVNAVAPGFIKSDM-------------TDKLNEKQREAI---------VQKIPL 211

Query: 246 K----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                  D+A A  +LAS+ + YI+G  L V+GG
Sbjct: 212 GTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG 245

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  171 bits (436), Expect = 7e-52
 Identities = 59/307 (19%), Positives = 105/307 (34%), Gaps = 64/307 (20%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-------------ADIDDAAG---IA 54
                 +A+VTG A+ +G +        G  V +             A ++       I 
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 55  L-AD--SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK- 110
           + AD  ++ ++          V+L      L+    +  GR D+L NNA         + 
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 111 SITDFDAN---------EFDNIIRINVRGAALGMKYAAKVMVP------RRSGCIISTAS 155
                +              ++   N       +K  A  +          +  II+   
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 156 VASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCED 215
             +    LG   YT++K A+ GLT++ A EL    IRVN + P G  + +          
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVL---------- 269

Query: 216 CMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR-----DIAEAALYLASDESKYISGHNL 270
                       E              V L  R     ++++  ++L S ++KYI+G  +
Sbjct: 270 ---VDDMPPAVWEGH---------RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCV 317

Query: 271 VVDGGFT 277
            VDGG++
Sbjct: 318 KVDGGYS 324

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  168 bits (429), Expect = 8e-52
 Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 46/273 (16%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSS-SPLVTYLHCDV 73
           + A++TG +RGIG A      + G  + I    +      +A+      SPLV  L  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNIIRI 126
              +    L++      G LD L NNAG          IT  D         +++ ++  
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAG----------ITR-DTLLVRMKDEDWEAVLEA 110

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           N+       + A K+M+  R G I++  SV  ++G  G   Y  SK  ++G T+  A E 
Sbjct: 111 NLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEY 170

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
            + GI VN ++P  + T M         + +      +E +E           LK +   
Sbjct: 171 AQRGITVNAVAPGFIETEMT--------ERLP-----QEVKEAY---------LKQIPAG 208

Query: 247 ----ARDIAEAALYLASDESKYISGHNLVVDGG 275
                 ++AEA  +L S+++ YI+G  L VDGG
Sbjct: 209 RFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG 241

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  169 bits (430), Expect = 1e-51
 Identities = 66/284 (23%), Positives = 110/284 (38%), Gaps = 44/284 (15%)

Query: 4   NTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSS 62
              +        ++A VTGG  G+G A  R     G  V ++    +            +
Sbjct: 14  AQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA 73

Query: 63  SPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA----- 117
                    DV+  +  +      ++  G++D+L NNAG          IT  DA     
Sbjct: 74  GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAG----------ITR-DATFMKM 122

Query: 118 --NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI 175
              ++D ++R ++       K     MV RR G I++  SV    G  G   Y  +K  I
Sbjct: 123 TKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI 182

Query: 176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
            G TK  A E  K GI VN +SP  +AT+M+                     E + + V 
Sbjct: 183 HGFTKTLALETAKRGITVNTVSPGYLATAMV---------------------EAVPQDVL 221

Query: 236 GLANLKGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
               L  + +       ++A    +L SD++ +++G +L ++GG
Sbjct: 222 EAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  168 bits (429), Expect = 1e-51
 Identities = 62/276 (22%), Positives = 107/276 (38%), Gaps = 45/276 (16%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLH 70
            +  +IA VTGG  GIG +  +   K G +VV     +    +   +   +         
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNI 123
            +V      +   +   ++ G +D+L NNAG          IT  D         ++  +
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG----------ITR-DVVFRKMTREDWQAV 118

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           I  N+       K     MV R  G II+ +SV    G  G   Y+ +K  I G T + A
Sbjct: 119 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            E+   G+ VN +SP  + T M+          +       +  EK+         +  +
Sbjct: 179 QEVATKGVTVNTVSPGYIGTDMV--------KAIR-----PDVLEKI---------VATI 216

Query: 244 TLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
            ++      +I     +LAS+ES + +G +  ++GG
Sbjct: 217 PVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  168 bits (428), Expect = 1e-51
 Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 55/276 (19%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           ++   +  +VTGG RGIG A  R F   G KV I            +  L+       + 
Sbjct: 17  RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAIT----YRSGEPPEGFLA-------VK 65

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNI 123
           CD++  + ++         HG +++L  NAG          +T  D         +F ++
Sbjct: 66  CDITDTEQVEQAYKEIEETHGPVEVLIANAG----------VTK-DQLLMRMSEEDFTSV 114

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           +  N+ G    +K A + M+  + G ++  +SV  L+G  G   Y  SK  +VG  ++ A
Sbjct: 115 VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLA 174

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            ELG   I  N ++P  V T M             +    +E+   +         +  V
Sbjct: 175 RELGSRNITFNVVAPGFVDTDM-------------TKVLTDEQRANI---------VSQV 212

Query: 244 TLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
            L       +IA    +LASD++ YI+G  + VDGG
Sbjct: 213 PLGRYARPEEIAATVRFLASDDASYITGAVIPVDGG 248

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  166 bits (424), Expect = 4e-51
 Identities = 63/248 (25%), Positives = 94/248 (37%), Gaps = 37/248 (14%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
                  ++TG +RGIGEAT RL    G +V +   D+    ALA  L         L  
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----EGALPLPG 57

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV  E D    +       G L  L NNAGV       K + +    E+  ++  N+ GA
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGV----GVMKPVHELTLEEWRLVLDTNLTGA 113

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
            LG+++A   ++ R  G I++  S+A      G  AY  SK  ++GL      +L +  +
Sbjct: 114 FLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANV 173

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RV  + P  V T                                     +   LK  D+A
Sbjct: 174 RVVNVLPGSVDT----------------------------GFAGNTPG-QAWKLKPEDVA 204

Query: 252 EAALYLAS 259
           +A L+   
Sbjct: 205 QAVLFALE 212

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  166 bits (424), Expect = 6e-51
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 46/273 (16%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVS 74
            + +VTG +RGIG+A      K G KV++       A   ++  + +          DVS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-------NEFDNIIRIN 127
            E D++ ++   I   G +D++ NNAG          IT  D        +++D +I +N
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAG----------ITR-DTLLIRMKKSQWDEVIDLN 110

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           + G  L  + A K+M+ +R G II+ ASV  L+G +G   Y  +K  ++G +K  A E  
Sbjct: 111 LTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA 170

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK- 246
              I VN + P  +A+ M           +      E+ E+K+         L  + L  
Sbjct: 171 SRNINVNVVCPGFIASDMT--------AKLG-----EDMEKKI---------LGTIPLGR 208

Query: 247 ---ARDIAEAALYLA-SDESKYISGHNLVVDGG 275
                ++A    +LA S  + YI+G    +DGG
Sbjct: 209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  167 bits (425), Expect = 3e-50
 Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 66/292 (22%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD----------------------IDD 49
            ++G++ IVTG   GIG A    F   GA+VV+ D                      I  
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 50  AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH 109
           A G A+AD              +V+       LI   +   G LD+L NNAG++    + 
Sbjct: 84  AGGEAVAD------------GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV----RD 127

Query: 110 KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGGL 163
           + I +    EFD +I ++++G    M++AA              G II+T+S A L G +
Sbjct: 128 RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV 187

Query: 164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPC 223
           G   Y+ +K  I  LT   A E+G+YG+ VN I+P    T M        E         
Sbjct: 188 GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP-SARTRMT-------ETVF------ 233

Query: 224 EEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
            E     ++            +   +++   ++L S E++ ++G    V+GG
Sbjct: 234 AEMMATQDQDFD--------AMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  171 bits (435), Expect = 2e-49
 Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 69/285 (24%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD---------------------IDDAA 51
            + K+ I+TG   G+G+     F K GAKVV+ D                     I    
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 52  GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS 111
           G+A+AD            + +V    D   ++   +   G + ++ NNAG+L +     S
Sbjct: 66  GVAVAD------------YNNVL---DGDKIVETAVKNFGTVHVIINNAGILRD----AS 106

Query: 112 ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS 171
           +      ++  +I +++ GA    K A      ++ G I++T+S A L G  G   Y  +
Sbjct: 107 MKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASA 166

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME 231
           K A++G  +  A E  KY I+ N I+P    + M        E  M            +E
Sbjct: 167 KSALLGFAETLAKEGAKYNIKANAIAPLA-RSRMT-------ESIMP--------PPMLE 210

Query: 232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
           +            L    +A   LYL+S E+  ++G    V  GF
Sbjct: 211 K------------LGPEKVAPLVLYLSSAEN-ELTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  157 bits (400), Expect = 2e-44
 Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 57/285 (20%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA--------- 51
              +       +L+ K+ ++TG   G+G+   + F K+GAKVV+ D  DA          
Sbjct: 308 PANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA 367

Query: 52  -GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHK 110
            G A  D              DV+  +D + +I   I K+G +DIL NNAG+L    + +
Sbjct: 368 GGEAWPD------------QHDVA--KDSEAIIKNVIDKYGTIDILVNNAGIL----RDR 409

Query: 111 SITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV 170
           S       E+D++ ++++ G     + A    V ++ G II+  S + + G  G   Y+ 
Sbjct: 410 SFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSS 469

Query: 171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM 230
           SK  I+GL+K  A E  K  I+VN ++P    T+M ++  +  E   +            
Sbjct: 470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMR--EQDKNLYHA-------- 518

Query: 231 EELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                              +A   +YL +D+   ++G    + GG
Sbjct: 519 -----------------DQVAPLLVYLGTDDV-PVTGETFEIGGG 545

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  162 bits (413), Expect = 3e-49
 Identities = 55/274 (20%), Positives = 102/274 (37%), Gaps = 30/274 (10%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVK---HGAKVVIADIDDAAGIALADSLLSSSP--L 65
             L   + ++TG +RG G A      +    G+ ++++   ++    L + L +  P   
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 66  VTYLHCDVSLEQDIQNLINVTISKHG----RLDILFNNAGVLGNQSKHKSITDFDANEFD 121
           V     D+  E  +Q L++           +  +L NNA  LG+ SK   +   D  E +
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSK-GFLNVNDLAEVN 120

Query: 122 NIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMGGLGPHAYTVSKHAIVGLT 179
           N   +N+                    S  +++ +S+ +L    G   Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           +  A E  +  +RV   +P  +   M   A ++ +D         E   K+++L      
Sbjct: 181 QVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKD--------PELRSKLQKLKS---- 226

Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVD 273
             G  +     A+  L L   ++ + SG    VD
Sbjct: 227 -DGALVDCGTSAQKLLGLLQKDT-FQSGA--HVD 256

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  166 bits (422), Expect = 2e-48
 Identities = 73/276 (26%), Positives = 112/276 (40%), Gaps = 46/276 (16%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K L+GK+A+VTG ARGIG     +F + GA VV  D+D AA        ++     T L 
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKR---VADKVGGTALT 265

Query: 71  CDVSLEQDIQNLINVTISKHG-RLDILFNNAGVLGNQSKHKSIT-D-----FDANEFDNI 123
            DV+ +  +  +       HG ++DIL NNAG          IT D      D   +D +
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAG----------ITRDKLLANMDEKRWDAV 315

Query: 124 IRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
           I +N+       +           G +I  +S+A + G  G   Y  +K  ++GL +  A
Sbjct: 316 IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALA 375

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
             L   GI +N ++P  + T M                      E +    R     +  
Sbjct: 376 PVLADKGITINAVAPGFIETKMT---------------------EAIPLATRE-VGRRLN 413

Query: 244 TLK----ARDIAEAALYLASDESKYISGHNLVVDGG 275
           +L       D+AE   Y AS  S  ++G+ + V G 
Sbjct: 414 SLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ 449

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  159 bits (405), Expect = 1e-47
 Identities = 39/202 (19%), Positives = 73/202 (36%), Gaps = 8/202 (3%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYL 69
           + L+GK  IVTG ++GIG        K GA VV+          +    L   +    Y+
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
              +      +  +       G LD+L  N       +   ++   D +     + +N  
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT----NTSLNLFHDDIHHVRKSMEVNFL 139

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG-- 187
              +    A   M+ + +G I+  +S+A  +      AY+ SK A+ G   +   E    
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198

Query: 188 KYGIRVNCISPFGVATSMLVNA 209
           +  + +       + T   + A
Sbjct: 199 RVNVSITLCVLGLIDTETAMKA 220

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  159 bits (405), Expect = 3e-47
 Identities = 65/284 (22%), Positives = 107/284 (37%), Gaps = 69/284 (24%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD---------------------IDDAA 51
            +G++ +VTG   G+G A    F + GA VV+ D                     I    
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66

Query: 52  GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS 111
           G A+A+            +  V      + L+   +   GR+D++ NNAG+L    + +S
Sbjct: 67  GKAVAN------------YDSVE---AGEKLVKTALDTFGRIDVVVNNAGIL----RDRS 107

Query: 112 ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS 171
            +     ++D I R+++RG+    + A   M  +  G II TAS + + G  G   Y+ +
Sbjct: 108 FSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAA 167

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME 231
           K  ++GL      E  K  I  N I+P    + M        E  M      E+  E + 
Sbjct: 168 KLGLLGLANTLVIEGRKNNIHCNTIAPNA-GSRMT-------ETVMP-----EDLVEAL- 213

Query: 232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                         K   +A   L+L  +     +G    V  G
Sbjct: 214 --------------KPEYVAPLVLWLCHESC-EENGGLFEVGAG 242

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  156 bits (397), Expect = 6e-47
 Identities = 54/248 (21%), Positives = 91/248 (36%), Gaps = 34/248 (13%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHC 71
           +L+ KIA+VTG   G+G   V+   +      +    +    ALA+        V  +  
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLA-ALAEIEG-----VEPIES 55

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           D+  E   +  ++  +     +D L + A V    ++  +I      E+   + +NV   
Sbjct: 56  DIVKEVLEEGGVD-KLKNLDHVDTLVHAAAV----ARDTTIEAGSVAEWHAHLDLNVIVP 110

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
           A   +     +    SGC+I   S A      G   Y  SKHA+ GL      E    GI
Sbjct: 111 AELSRQLLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGI 169

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RV+ +SP    T ML             G    +      E+           ++ ++IA
Sbjct: 170 RVSTVSPGPTNTPML------------QGLMDSQGTNFRPEIY----------IEPKEIA 207

Query: 252 EAALYLAS 259
            A  ++  
Sbjct: 208 NAIRFVID 215

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  152 bits (387), Expect = 2e-45
 Identities = 53/281 (18%), Positives = 101/281 (35%), Gaps = 52/281 (18%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
           M L         +  K  +V   +RGIG A   +  + GA+V I   ++          +
Sbjct: 13  MELG--------IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV 64

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
                            D++  +++   K   +DIL  NAG      K     +    +F
Sbjct: 65  VC---------------DLRKDLDLLFEKVKEVDILVLNAGG----PKAGFFDELTNEDF 105

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
              I          ++     M  +  G I++  S + +      +    ++ A+ G  K
Sbjct: 106 KEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLK 165

Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL 240
             + E+  YGI VNC++P    T  +                 E   E+ ++        
Sbjct: 166 TLSFEVAPYGITVNCVAPGWTETERVK----------------ELLSEEKKK-----QVE 204

Query: 241 KGVTLK----ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             + ++      +IA    +L S+++ Y++G  +VVDGG +
Sbjct: 205 SQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  146 bits (371), Expect = 4e-43
 Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 36/248 (14%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHCD 72
           E K+A++TG +RGIGEA  R   + G  + +          +A  L+    + V Y H D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  + ++      + + G +D++  NAG+       K + +    EF  +I +N+ G  
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGL----GYFKRLEELSEEEFHEMIEVNLLGVW 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVAS-LMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             +K     +       +++T+ V++ L+   G   Y  +K A   L +    E     +
Sbjct: 117 RTLKAFLDSLKRTGGLALVTTSDVSARLIPYGG--GYVSTKWAARALVRTFQIE--NPDV 172

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           R   + P  V T    +               + +E+                LK  +IA
Sbjct: 173 RFFELRPGAVDTYFGGSKPG------------KPKEKGY--------------LKPDEIA 206

Query: 252 EAALYLAS 259
           EA   L  
Sbjct: 207 EAVRCLLK 214

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  146 bits (372), Expect = 4e-43
 Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 25/247 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           +  K+ ++TG + GIGE   R     GAK+++     A   A+A  +  +         D
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +       +   GR+D+L NNAGV+        +     +E++ +I +N++G  
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLS----PLAAVKVDEWERMIDVNIKGVL 117

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
            G+     +M  +RSG II+  S+ +L        Y  +K A+  ++     E     IR
Sbjct: 118 WGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIR 175

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           V C++P  V + +                         EE +  +   + + L+  DIA 
Sbjct: 176 VTCVNPGVVESELAGTITH-------------------EETMAAMDTYRAIALQPADIAR 216

Query: 253 AALYLAS 259
           A   +  
Sbjct: 217 AVRQVIE 223

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  144 bits (366), Expect = 2e-42
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 22/249 (8%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
             L+GK+A++TG + GIGEAT R     GA V IA        AL D L ++   V  L 
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLE 62

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+  Q +   +  T+   G LDIL NNAG++        + D D  ++  +I  N+ G
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLG----PVEDADTTDWTRMIDTNLLG 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                + A   ++ R  G ++  +S+A  +       Y  +K  +   ++    E+ + G
Sbjct: 119 LMYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG 177

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           +RV  I P    T +                     +E  E+ +  +       L+A+DI
Sbjct: 178 VRVVVIEPGTTDTELR------------GHITHTATKEMYEQRISQI-----RKLQAQDI 220

Query: 251 AEAALYLAS 259
           AEA  Y  +
Sbjct: 221 AEAVRYAVT 229

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  151 bits (383), Expect = 5e-42
 Identities = 66/285 (23%), Positives = 109/285 (38%), Gaps = 69/285 (24%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD---------------------IDDAA 51
            +G++A+VTG   G+G     LF + GAKVV+ D                     I  A 
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 52  GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKS 111
           G A+AD            +  V    D   +I   I   GR+DIL NNAG+L    + +S
Sbjct: 77  GEAVAD------------YNSVI---DGAKVIETAIKAFGRVDILVNNAGIL----RDRS 117

Query: 112 ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS 171
           +      +++ +  ++++G+    + A   M  +  G II T+S + + G  G   YT +
Sbjct: 118 LVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAA 177

Query: 172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME 231
           K  ++GL    A E  +  +  N I P   A+ M        +   +  KP         
Sbjct: 178 KMGLIGLANTVAIEGARNNVLCNVIVPTA-ASRMTEGILP--DILFNELKP--------- 225

Query: 232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                           + IA    YL  +  +  +G  +    G+
Sbjct: 226 ----------------KLIAPVVAYLCHESCE-DNGSYIESAAGW 253

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  142 bits (360), Expect = 5e-41
 Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 34/257 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA--DIDDAAGIALADSLLSSSPL--VTY 68
              ++A+VTG + GIG A  R  V+ G KVV     + +     LA    S+     +  
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE--ELAAECKSAGYPGTLIP 87

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             CD+S E+DI ++ +   S+H  +DI  NNAG+    ++  ++     + + ++  +NV
Sbjct: 88  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL----ARPDTLLSGSTSGWKDMFNVNV 143

Query: 129 RGAALGMKYAAKVMVPRR--SGCIISTASVA--SLMGGLGPHAYTVSKHAIVGLTKNTAC 184
              ++  + A + M  R    G II+  S++   ++     H Y+ +K+A+  LT+    
Sbjct: 144 LALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203

Query: 185 ELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
           EL   +  IR  CISP  V T                     ++ EK       +     
Sbjct: 204 ELREAQTHIRATCISPGVVETQFAFKLHD-------------KDPEKAAATYEQMK---- 246

Query: 243 VTLKARDIAEAALYLAS 259
             LK  D+AEA +Y+ S
Sbjct: 247 -CLKPEDVAEAVIYVLS 262

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  141 bits (357), Expect = 8e-41
 Identities = 59/259 (22%), Positives = 102/259 (39%), Gaps = 26/259 (10%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
            ++   ++  +    K+ ++TG + GIGEA  R F + G  +++         AL     
Sbjct: 2   ASMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL--- 58

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF 120
              P       DV+ +      I      +G  D + NNAG+         I   +ANE+
Sbjct: 59  ---PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM----MLLGQIDTQEANEW 111

Query: 121 DNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTK 180
             +  +NV G   GM+     M  R  G II+ +S+A         AY  +K A+  +++
Sbjct: 112 QRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISE 171

Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL 240
           N   E+    +RV  I+P  V T +L            S    ++ ++  +     +   
Sbjct: 172 NVREEVAASNVRVMTIAPSAVKTELL------------SHTTSQQIKDGYDAWRVDMGG- 218

Query: 241 KGVTLKARDIAEAALYLAS 259
               L A D+A A L+   
Sbjct: 219 ---VLAADDVARAVLFAYQ 234

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  133 bits (338), Expect = 9e-39
 Identities = 27/191 (14%), Positives = 63/191 (32%), Gaps = 29/191 (15%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
               ++ G +  +G A      +  A+V+ A                       +  D++
Sbjct: 3   AMKILLIGASGTLGSAVKERL-EKKAEVITAGRHSGD-----------------VTVDIT 44

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
               I+ +      + G++D + +  G     +    +T+    +    I   + G    
Sbjct: 45  NIDSIKKMYE----QVGKVDAIVSATGS----ATFSPLTELTPEKNAVTISSKLGGQINL 96

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           +      +     G    T  +      +   +  ++  A+    K+ A E+ + GIR+N
Sbjct: 97  VLLGIDSL--NDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRIN 153

Query: 195 CISPFGVATSM 205
            +SP  +  S 
Sbjct: 154 TVSPNVLEESW 164

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  132 bits (334), Expect = 4e-37
 Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 28/265 (10%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHG---AKVVIADIDDAAGIALAD 57
            +++  +KA + L  K  ++TG + GIG+AT   +++      K+++A         L  
Sbjct: 19  SHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKK 78

Query: 58  SLLSSSP--LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG-VLGNQSKHKSITD 114
           ++    P   V     D++  + I+  I     +   +DIL NNAG  LG+      +  
Sbjct: 79  TIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR----VGQ 134

Query: 115 FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA 174
               +  ++   NV       +    +   + SG I++  S+A          Y  SK A
Sbjct: 135 IATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFA 194

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV 234
           +   T +   EL    IRV  I+P  V T   +  ++               EE+ + + 
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYR-------------GNEEQAKNVY 241

Query: 235 RGLANLKGVTLKARDIAEAALYLAS 259
           +         L A D+A+  +Y  S
Sbjct: 242 KDT-----TPLMADDVADLIVYATS 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  130 bits (328), Expect = 2e-36
 Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 23/254 (9%)

Query: 7   KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLV 66
                +       +TG   G GEA  R F + G  +V+    +    ALA   LS+   V
Sbjct: 13  LVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGE-LSAKTRV 71

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
             L  DV     +   ++    +   L  L NNAG+             D +++D ++  
Sbjct: 72  LPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP---AQSCDLDDWDTMVDT 128

Query: 127 NVRGAALGMKYAAKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           N++G     +     ++   +G  I++  SVA      G H Y  +K  +   + N  C+
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCD 188

Query: 186 LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL 245
           L   G+RV  + P    +   +  +               ++ + ++   G        +
Sbjct: 189 LQGTGVRVTNLEPGLCESEFSLVRFG-------------GDQARYDKTYAGA-----HPI 230

Query: 246 KARDIAEAALYLAS 259
           +  DIAE   ++ +
Sbjct: 231 QPEDIAETIFWIMN 244

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  127 bits (321), Expect = 7e-36
 Identities = 32/188 (17%), Positives = 73/188 (38%), Gaps = 11/188 (5%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
            + ++TG + G+G    +L+   G    +    ++    + + L ++   V Y   D++ 
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN---VGYRARDLAS 58

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
            Q+++ L             + ++AG          + + D  +   +I  N+  A   +
Sbjct: 59  HQEVEQLFE---QLDSIPSTVVHSAGS----GYFGLLQEQDPEQIQTLIENNLSSAINVL 111

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +   K    +    ++   S A+         Y   K A+ GL ++   EL    +++  
Sbjct: 112 RELVKRYKDQPVN-VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIA 170

Query: 196 ISPFGVAT 203
           + P G+AT
Sbjct: 171 VYPGGMAT 178

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  126 bits (318), Expect = 1e-35
 Identities = 34/188 (18%), Positives = 73/188 (38%), Gaps = 19/188 (10%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
            ++TG   G+G A  R     G  ++++     A   LA  +         L  D++ E 
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVG-----ARALPADLADEL 55

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
           + + L+     + G LD+L +  G     +   S+ +   +  + ++  ++  AA    +
Sbjct: 56  EAKALL----EEAGPLDLLVHAVGK----AGRASVREAGRDLVEEMLAAHLLTAA----F 103

Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
             K    ++    +   +    +   G  AY  +K A+    +    EL + G+ +  + 
Sbjct: 104 VLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVR 163

Query: 198 PFGVATSM 205
              VAT +
Sbjct: 164 LPAVATGL 171

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  126 bits (320), Expect = 2e-35
 Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 29/246 (11%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIA--DIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           I +VTG   G GE   R F++ G KV+      +      L D L      +     DV 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ--ELKDEL---GDNLYIAQLDVR 56

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGV-LGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
               I+ ++    ++   +DIL NNAG+ LG +            +++ +I  N +G   
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEP----AHKASVEDWETMIDTNNKGLVY 112

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRV 193
             +     MV R  G II+  S A      G + Y  +K  +   + N   +L    +RV
Sbjct: 113 MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRV 172

Query: 194 NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA 253
             I P  V  +              S    + ++ K E+  +       V L   D++EA
Sbjct: 173 TDIEPGLVGGTEF------------SNVRFKGDDGKAEKTYQNT-----VALTPEDVSEA 215

Query: 254 ALYLAS 259
             ++++
Sbjct: 216 VWWVST 221

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  118 bits (297), Expect = 2e-31
 Identities = 59/265 (22%), Positives = 98/265 (36%), Gaps = 24/265 (9%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVV-----IADIDDAAGIALADSLLSSSPLV 66
            +  KI ++TG + G G  T       G +V      I   + +   A+A     +   +
Sbjct: 2   VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDL 61

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG--VLGNQSKHKSITDFDANEFDNII 124
             L  DV  +  +   I+  I + GR+D+L +NAG  V G          F   +F  + 
Sbjct: 62  RTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFG------PAEAFTPEQFAELY 115

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---GLGPHAYTVSKHAIVGLTKN 181
            INV       + A   M  ++ G +I  +S +S  G    L P  Y  +K A+  +   
Sbjct: 116 DINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP--YFAAKAAMDAIAVQ 173

Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK 241
            A EL ++GI  + I P    +     A     D  D  +  E E      L   +    
Sbjct: 174 YARELSRWGIETSIIVPGAFTSGTNHFAHSGVPD--DHARQAEYEAGPNAGLGEEIKKAF 231

Query: 242 GVTLKA----RDIAEAALYLASDES 262
              +        +A+A + +    S
Sbjct: 232 AAIVPPDADVSLVADAIVRVVGTAS 256

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  111 bits (280), Expect = 3e-29
 Identities = 51/276 (18%), Positives = 88/276 (31%), Gaps = 74/276 (26%)

Query: 12  TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLH 70
             + + A+VTGG +GIG    +    +G  VV+   D   G    + L +S+   V +  
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 71  CDV-SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKH-------------------- 109
            DV      + +L +   +  G+LDIL NNAGV G                         
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 110 ------KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL 163
                 + +        +  ++IN  G     +    ++    S  I++ +S    +  +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 164 GPH-------------------------------------------AYTVSKHAIVGLTK 180
                                                         AYT SK  +   T+
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 181 NTACELGKYGIRVNCISPFGVATSMLVNAW-KSCED 215
             A ++     +VNC+ P  V T M       + E+
Sbjct: 249 VLANKIP--KFQVNCVCPGLVKTEMNYGIGNYTAEE 282

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  108 bits (272), Expect = 3e-28
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVV-----IADIDDAAGIALADSLLSSSPLVTYLH 70
           K+ +VTG + G G A     V  G  V+        +DD    A  D   +       + 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA-AYPDRAEA-------IS 57

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAG--VLGNQSKHKSITDFDANEFDNIIRINV 128
            DV+  + I  +    ++++GR+D+L NNAG   +G      +  +    E  ++  ++V
Sbjct: 58  LDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG------AFEETTERELRDLFELHV 111

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
            G A   +     M  R SG +++ +S    +   G  AY+ +K A+  L++  A E+  
Sbjct: 112 FGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAP 171

Query: 189 YGIRVNCISPFGVATSML 206
           +GI+V  + P    T++ 
Sbjct: 172 FGIKVLIVEPGAFRTNLF 189

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  107 bits (270), Expect = 2e-27
 Identities = 54/255 (21%), Positives = 94/255 (36%), Gaps = 17/255 (6%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAK--VVIA---DIDDAAGI-ALADSLLSSSPLVTYL 69
            + ++TG + GIG           ++   V A   D+     +   A +L      +  L
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAG--VLGNQSKHKSITDFDANEFDNIIRIN 127
             DV   + +           GR+D+L  NAG  +LG       +     +   +++ +N
Sbjct: 63  QLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLG------PLEALGEDAVASVLDVN 114

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           V G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L 
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
            +G+ ++ I    V T+ +     S E+ +D            + L       +      
Sbjct: 175 PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI-HTFHRFYQYLAHSKQVFREAAQNP 233

Query: 248 RDIAEAALYLASDES 262
            ++AE  L       
Sbjct: 234 EEVAEVFLTALRAPK 248

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (261), Expect = 9e-27
 Identities = 41/208 (19%), Positives = 75/208 (36%), Gaps = 21/208 (10%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKV--VIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
              ++TG  RG+G   V+  +        +     +       + L  +   +  L  D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 74  SLEQDIQNLINV--TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
                   L+     ++K   L++LFNNAG+     K   IT   + E  + ++ N    
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP---KSARITAVRSQELLDTLQTNTVVP 138

Query: 132 AL-----------GMKYAAKVMVPRRSGCIIS-TASVASL--MGGLGPHAYTVSKHAIVG 177
            +             K      +      II+ ++ + S+      G +AY  SK A+  
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 198

Query: 178 LTKNTACELGKYGIRVNCISPFGVATSM 205
            TK+ + +L    I    + P  V T M
Sbjct: 199 ATKSLSVDLYPQRIMCVSLHPGWVKTDM 226

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  104 bits (261), Expect = 1e-26
 Identities = 54/250 (21%), Positives = 90/250 (36%), Gaps = 57/250 (22%)

Query: 15  GKIAIVTGGARGIGEATVR-LFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
             +A+VTGG +GIG A VR L       VV+   D   G A    L +      +   D+
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
              Q I+ L +    ++G LD+L NNAG+    +           + +  ++ N      
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVAD----PTPFHIQAEVTMKTNF----F 115

Query: 134 GMKYAAKVMVP--RRSGCIISTASVASLMG------------------------------ 161
           G +     ++P  +  G +++ +S+ S+                                
Sbjct: 116 GTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFV 175

Query: 162 -----------GLGPHAYTVSKHAIVGLTKNTACELGKY----GIRVNCISPFGVATSML 206
                      G    AY V+K  +  L++  A +L +      I +N   P  V T M 
Sbjct: 176 EDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235

Query: 207 VN-AWKSCED 215
              A KS E+
Sbjct: 236 GPKATKSPEE 245

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 47/211 (22%), Positives = 77/211 (36%), Gaps = 26/211 (12%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKV-VIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
              +VTG  RGIG   V+  VK      +IA   D        S+  S   V  L   V+
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR--VHVLPLTVT 61

Query: 75  LEQDIQNLINVTISKHGR--LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            ++ +   ++      G   L +L NNAGVL     + + T+ +       + +N     
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL---SYGTNTEPNRAVIAEQLDVNTTSVV 118

Query: 133 --------LGMKYAAKVMVPRRSGCIISTASVASLMG----------GLGPHAYTVSKHA 174
                   L    A+K    + S    +  +++S +G               AY +SK A
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178

Query: 175 IVGLTKNTACELGKYGIRVNCISPFGVATSM 205
           I    +  A +L    + V    P  V T++
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 51/282 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           LE K  ++ G A  R I     ++  + GAK+V     + +      L + L      + 
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHL- 88

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
               DV  ++++ N         G +D ++++      +      ++     F     I+
Sbjct: 89  -YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDIS 147

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGLT 179
                +    A K+M     G I++T  +          +MG        V+K ++    
Sbjct: 148 SYSLTIVAHEAKKLM--PEGGSIVATTYLGGEFAVQNYNVMG--------VAKASLEANV 197

Query: 180 KNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           K  A +LG   IRVN IS  G    ++   +                       + + + 
Sbjct: 198 KYLALDLGPDNIRVNAISA-GPIRTLSAKGVGGF------------------NTILKEIE 238

Query: 236 GLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             A LK  V     ++ + A YL SD S  ++G N+ VD GF
Sbjct: 239 ERAPLKRNVDQV--EVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 75/294 (25%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           LEG+  +V G A  R I     R   + GA+++     +        LA +L  +  ++ 
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSII- 63

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFD-NIIRI 126
            L CDV+ + +I+        + G +  +            H  I   +  E     +  
Sbjct: 64  -LPCDVTNDAEIETCFASIKEQVGVIHGIA-----------H-CIAFANKEELVGEYLNT 110

Query: 127 NVRGAALGM-----------KYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHA 167
           N  G  L             K A  +M     G I++   +          +MG      
Sbjct: 111 NRDGFLLAHNISSYSLTAVVKAARPMM--TEGGSIVTLTYLGGELVMPNYNVMG------ 162

Query: 168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPC 223
             V+K ++    K  A +LGK  IRVN IS  G    ++   + +               
Sbjct: 163 --VAKASLDASVKYLAADLGKENIRVNSISA-GPIRTLSAKGISDF-------------- 205

Query: 224 EEEEEKMEELVRGLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                 + + +   A L+   T +  ++ + A +L SD S+ I+G NL VD GF
Sbjct: 206 ----NSILKDIEERAPLRRTTTPE--EVGDTAAFLFSDMSRGITGENLHVDSGF 253

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 65/296 (21%), Positives = 107/296 (36%), Gaps = 68/296 (22%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIA-LADSLLSSSPLVTYL 69
           L+GK  +V+G      I     R+  + GA++V+   D    I  + D L + +PL   L
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPL---L 61

Query: 70  HCDVSLEQDIQNLINVTISKH----GRLDILFNNAGVLGNQSKHKSI-----TDFDANEF 120
             DV  E+ + +L    +++      +LD +            H SI     T    N F
Sbjct: 62  ELDVQNEEHLASLAG-RVTEAIGAGNKLDGVV-----------H-SIGFMPQTGMGINPF 108

Query: 121 DNIIRINVRGA---------ALGMKYAAKVMVPRRSGCIIST---ASVA----SLMGGLG 164
            +    +V            ++  K    +M     G I+      S A    + M    
Sbjct: 109 FDAPYADVSKGIHISAYSYASM-AKALLPIM--NPGGSIVGMDFDPSRAMPAYNWMT--- 162

Query: 165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSG 220
                V+K A+  + +  A E GKYG+R N ++  G    +A S +V      E      
Sbjct: 163 -----VAKSALESVNRFVAREAGKYGVRSNLVAA-GPIRTLAMSAIVGGALGEEAGAQI- 215

Query: 221 KPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                  + +EE     A +      A  +A+    L SD     +G  +  DGG 
Sbjct: 216 -------QLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              +  ++TG   G+G  T R   + GA V++A  D   G A A ++      V     D
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ---VEVRELD 70

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGV 102
           +     ++             D+L NNAG+
Sbjct: 71  LQDLSSVRRF----ADGVSGADVLINNAGI 96

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 64.5 bits (158), Expect = 2e-12
 Identities = 60/282 (21%), Positives = 106/282 (37%), Gaps = 53/282 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           L GK A+V G    R +G A      + GA+V ++   +        LA++L     L+ 
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL--GGALL- 62

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
               DV+ ++++  L        G LD L +       ++      D    ++   + ++
Sbjct: 63  -FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVS 121

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGLT 179
                   + A  ++  R  G I++    AS        +M         ++K A+    
Sbjct: 122 AYSLVAVARRAEPLL--REGGGIVTLTYYASEKVVPKYNVMA--------IAKAALEASV 171

Query: 180 KNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           +  A ELG  G+RVN IS  G    VA   +                      KM + V 
Sbjct: 172 RYLAYELGPKGVRVNAISA-GPVRTVAARSIPGF------------------TKMYDRVA 212

Query: 236 GLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             A L+  +T +  ++    L+L S  +  I+G  + VD G+
Sbjct: 213 QTAPLRRNITQE--EVGNLGLFLLSPLASGITGEVVYVDAGY 252

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 63.0 bits (154), Expect = 9e-12
 Identities = 61/296 (20%), Positives = 105/296 (35%), Gaps = 80/296 (27%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           L GK  +VTG A    I     +   + GA++     +D         A  L   S +V 
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--GSDIV- 63

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSI-----TDFDANEFDN 122
            L CDV+ +  I  +         + D              H SI        D +  + 
Sbjct: 64  -LQCDVAEDASIDTMFAELGKVWPKFDGFV-----------H-SIGFAPGDQLDGDYVNA 110

Query: 123 IIRINVRGA---------ALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGP 165
           + R   + A         A+  K    ++       +++ + + +        +MG    
Sbjct: 111 VTREGFKIAHDISSYSFVAM-AKACRSML--NPGSALLTLSYLGAERAIPNYNVMG---- 163

Query: 166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGK 221
               ++K ++    +  A  +G  G+RVN IS  G    +A S + +             
Sbjct: 164 ----LAKASLEANVRYMANAMGPEGVRVNAISA-GPIRTLAASGIKDF------------ 206

Query: 222 PCEEEEEKMEELVRGLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                  KM      +  ++  VT++  D+  +A +L SD S  ISG  + VDGGF
Sbjct: 207 ------RKMLAHCEAVTPIRRTVTIE--DVGNSAAFLCSDLSAGISGEVVHVDGGF 254

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 61/295 (20%), Positives = 105/295 (35%), Gaps = 78/295 (26%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG--IALADSLLSSSPLVTY 68
           L GK  ++TG    + I     +   + GA++    +         L      +   V  
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAV-- 79

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSI-----TDFDANEFDNI 123
           L CDV  +Q+I++L          LD +            H SI        + N  D +
Sbjct: 80  LPCDVISDQEIKDLFVELGKVWDGLDAIV-----------H-SIAFAPRDQLEGNFIDCV 127

Query: 124 IRINVRGA---------ALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPH 166
            R     A         AL  K    +M   R+  +++   + +         MG     
Sbjct: 128 TREGFSIAHDISAYSFAAL-AKEGRSMM-KNRNASMVALTYIGAEKAMPSYNTMG----- 180

Query: 167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKP 222
              V+K ++    + TA  LG+ GI+VN +S  G    +A S + N              
Sbjct: 181 ---VAKASLEATVRYTALALGEDGIKVNAVSA-GPIKTLAASGISNF------------- 223

Query: 223 CEEEEEKMEELVRGLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                +KM +    ++ LK  V +   ++     +L SD +  I+G  + VD G+
Sbjct: 224 -----KKMLDYNAMVSPLKKNVDIM--EVGNTVAFLCSDMATGITGEVVHVDAGY 271

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 59/282 (20%), Positives = 112/282 (39%), Gaps = 53/282 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           L+GK  ++ G A  + I     +     GA +    ++++       +A  L  +SP V 
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL--NSPYV- 60

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
               DVS E+  ++L N      G LD + ++      ++   S+ +   + F+  + I+
Sbjct: 61  -YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEIS 119

Query: 128 VRGAALGMKYAAKVMVPRRSGCII------STASVAS--LMGGLGPHAYTVSKHAIVGLT 179
           V            ++       ++      ST  +A   +MG        ++K A+    
Sbjct: 120 VYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMG--------LAKAALESAV 169

Query: 180 KNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           +  A +LGK+ IRVN +S  G    +A+S + +                     + +   
Sbjct: 170 RYLAVDLGKHHIRVNALSA-GPIRTLASSGIADF------------------RMILKWNE 210

Query: 236 GLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             A L+  V+L+  ++  A +YL S  S  +SG    VD G+
Sbjct: 211 INAPLRKNVSLE--EVGNAGMYLLSSLSSGVSGEVHFVDAGY 250

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 52/282 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           LEGK A++TG A  R I     + F + GA++               +A      S LV 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF--GSDLV- 75

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            + CDVSL++DI+NL        G LDI+ ++      +     + D     F   + I+
Sbjct: 76  -VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDIS 134

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGLT 179
           V       +    +M   R+G I++ +   +        +MG        ++K A+    
Sbjct: 135 VYSLIALTRELLPLM-EGRNGAIVTLSYYGAEKVVPHYNVMG--------IAKAALESTV 185

Query: 180 KNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           +  A ++ K+G R+N IS  G    +A   +                       + E   
Sbjct: 186 RYLAYDIAKHGHRINAISA-GPVKTLAAYSITGF------------------HLLMEHTT 226

Query: 236 GLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
            +      +T++  D+ + A++L SD ++ I+G  + VD G+
Sbjct: 227 KVNPFGKPITIE--DVGDTAVFLCSDWARAITGEVVHVDNGY 266

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 62.6 bits (153), Expect = 1e-11
 Identities = 64/296 (21%), Positives = 104/296 (35%), Gaps = 80/296 (27%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           L+GK  ++TG    R I     +   + GA++    + D         A      S LV 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSELV- 68

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSI-----TDFDANEFDN 122
              CDV+ +  I  L     +    LD L            H SI          +  D 
Sbjct: 69  -FPCDVADDAQIDALFASLKTHWDSLDGLV-----------H-SIGFAPREAIAGDFLDG 115

Query: 123 IIRINVRGA---------ALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGP 165
           + R N R A         AL  K A  ++       +++ + + +         MG    
Sbjct: 116 LTRENFRIAHDISAYSFPAL-AKAALPML--SDDASLLTLSYLGAERAIPNYNTMG---- 168

Query: 166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGK 221
               ++K A+    +  A  LG  G+RVN IS  G    +A S + +             
Sbjct: 169 ----LAKAALEASVRYLAVSLGAKGVRVNAISA-GPIKTLAASGIKSF------------ 211

Query: 222 PCEEEEEKMEELVRGLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
                  K+ + V   + LK  VT++   +  A  +L SD +  ++   + VD GF
Sbjct: 212 ------GKILDFVESNSPLKRNVTIE--QVGNAGAFLLSDLASGVTAEVMHVDSGF 259

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 65/282 (23%), Positives = 104/282 (36%), Gaps = 53/282 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           L+GK  ++ G A  R I     +   + GA++      DA       LA+ L   + +  
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--GAFVA- 85

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
             HCDV+    I  +      K G+LD L +  G            D     F N + I+
Sbjct: 86  -GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLIS 144

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGLT 179
           V       + A K+M     G I++     +        +MG        V+K A+    
Sbjct: 145 VYSLTAVSRRAEKLM--ADGGSILTLTYYGAEKVMPNYNVMG--------VAKAALEASV 194

Query: 180 KNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           K  A +LG   IRVN IS  G    +A S + +                     + +   
Sbjct: 195 KYLAVDLGPQNIRVNAISA-GPIKTLAASGIGDF------------------RYILKWNE 235

Query: 236 GLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             A L+  VT+   ++ +  LY  SD S+ ++G     D G+
Sbjct: 236 YNAPLRRTVTID--EVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 63/282 (22%), Positives = 104/282 (36%), Gaps = 53/282 (18%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLLSSSPLVT 67
           +EGK  ++ G A  + +     +     GA+V +  + +        LA+SL     L  
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--GVKLT- 84

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            + CDVS  + + N+  V   + G LD + +               D     F   + I+
Sbjct: 85  -VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHIS 143

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVAS--------LMGGLGPHAYTVSKHAIVGLT 179
                     A  +M     G I++ +   +        +MG        V K A+    
Sbjct: 144 CYSFTYIASKAEPLM--TNGGSILTLSYYGAEKVVPHYNVMG--------VCKAALEASV 193

Query: 180 KNTACELGKYGIRVNCISPFG----VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR 235
           K  A +LGK  IRVN IS  G    +A+S + +                     +    +
Sbjct: 194 KYLAVDLGKQQIRVNAISA-GPVRTLASSGISDF------------------HYILTWNK 234

Query: 236 GLANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF 276
             + L+   TL   D+  AALYL SD  +  +G  + VD G+
Sbjct: 235 YNSPLRRNTTLD--DVGGAALYLLSDLGRGTTGETVHVDCGY 274

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 61.1 bits (148), Expect = 5e-11
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 8/101 (7%)

Query: 1   MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
                 K A  +++GK A+V  G   +G  +  L    GA+VV+         A ADS+ 
Sbjct: 105 GVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVN 164

Query: 61  SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAG 101
                V     + + +      +            +F    
Sbjct: 165 KRFK-VNVTAAETADDASRAEAV-------KGAHFVFTAGA 197

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 61/312 (19%), Positives = 104/312 (33%), Gaps = 74/312 (23%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGI--------------ALA 56
           L G+ A V G A   G G A  +     GA+V +       G+               L 
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 57  DSLLSSSPLVT----------YLHCDVSLEQDIQNLINVTIS--------KHGRLDILFN 98
           D  L     V            +  D+   +    +   TI           G +DIL +
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 99  NAGVLGNQSK-HKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA 157
           +   L N  +  K + +     +      +       +++   +M     G  ++ + +A
Sbjct: 127 S---LANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM--NEGGSAVTLSYLA 181

Query: 158 S---------LMGGLGPHAYTVSKHAIVGLTKNTACELG-KYGIRVNCISPFGVAT---S 204
           +          M          +K A+   T+  A E G KYG+RVN IS   + +   S
Sbjct: 182 AERVVPGYGGGMS--------SAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAAS 233

Query: 205 MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKY 264
            +                 +   +   +     A L+   L + D+  AAL+L S  ++ 
Sbjct: 234 AI------------GKSGEKSFIDYAIDYSYNNAPLR-RDLHSDDVGGAALFLLSPLARA 280

Query: 265 ISGHNLVVDGGF 276
           +SG  L VD G 
Sbjct: 281 VSGVTLYVDNGL 292

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 59/316 (18%), Positives = 93/316 (29%), Gaps = 88/316 (27%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS------- 63
           L GK A + G A   G G A  +     GA++++     A  I                 
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 64  -----------PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSI 112
                      PL         + +D++       S +  +                 SI
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVR-----QDFGSI 120

Query: 113 TDF------DANEFD-NIIRINVRGAALGM-----------KYAAKVMVPRRSGCIISTA 154
            D       +  E    ++  + +G    +            +   +M     G  IS  
Sbjct: 121 -DILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM--NPGGASISLT 177

Query: 155 SVAS---------LMGGLGPHAYTVSKHAIVGLTKNTACELG-KYGIRVNCISPFG---- 200
            +AS          M          +K A+   T+  A E G K  IRVN IS  G    
Sbjct: 178 YIASERIIPGYGGGMS--------SAKAALESDTRVLAFEAGRKQNIRVNTISA-GPLGS 228

Query: 201 VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASD 260
            A   +                     + M E     A ++  TL A ++  AA +L S 
Sbjct: 229 RAAKAIGFI------------------DTMIEYSYNNAPIQ-KTLTADEVGNAAAFLVSP 269

Query: 261 ESKYISGHNLVVDGGF 276
            +  I+G  + VD G 
Sbjct: 270 LASAITGATIYVDNGL 285

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 59/325 (18%), Positives = 107/325 (32%), Gaps = 87/325 (26%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTY-- 68
           L GK A V G A   G G A  +L    GA+V++        I       S     ++  
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 69  -----------------------------------LHCDVSLEQDIQNLINVTIS----- 88
                                              +  +VS  +    +   TIS     
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126

Query: 89  ---KHGRLDILFNNAGVLGNQSK-HKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP 144
                G++DIL ++   L N  +  K +       +   +  +       +++   +M  
Sbjct: 127 VRADVGQIDILVHS---LANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLM-- 181

Query: 145 RRSGCIISTASVAS---------LMGGLGPHAYTVSKHAIVGLTKNTACELGK-YGIRVN 194
           +  G  ++ + +AS          M          +K A+    +  A E G+   +RVN
Sbjct: 182 KEGGSALALSYIASEKVIPGYGGGMS--------SAKAALESDCRTLAFEAGRARAVRVN 233

Query: 195 CISPFGVAT---SMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           CIS   + +   S +                 +   +   +     A L+   L++ D+ 
Sbjct: 234 CISAGPLKSRAASAI------------GKAGDKTFIDLAIDYSEANAPLQ-KELESDDVG 280

Query: 252 EAALYLASDESKYISGHNLVVDGGF 276
            AAL+L S  ++ ++G  L VD G 
Sbjct: 281 RAALFLLSPLARAVTGATLYVDNGL 305

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 25/122 (20%), Positives = 37/122 (30%), Gaps = 28/122 (22%)

Query: 183 ACELG-KYGIRVNCISP----------FGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME 231
           A  LG  Y IR+N IS                +   N     ++               +
Sbjct: 201 AYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEK 260

Query: 232 ELVRGLANLKGV-----------------TLKARDIAEAALYLASDESKYISGHNLVVDG 274
           E  +  A+                      L + DI   A +L S ES+ I+G  + VD 
Sbjct: 261 EEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN 320

Query: 275 GF 276
           G 
Sbjct: 321 GL 322

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 11/154 (7%)

Query: 19   IVTGGARGIGEATVRLFVKHGAK-VVIA---DIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            ++TGG  G G    +     GA+ +V+     I                  V     + S
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNAS 1947

Query: 75   LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
                 ++LI    ++ G +  +FN A VL    +   + +     F ++ +    G A  
Sbjct: 1948 SLDGARSLIT-EATQLGPVGGVFNLAMVL----RDAVLENQTPEFFQDVSKPKYSGTANL 2002

Query: 135  MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY 168
             +   +         I S  SV+   G  G   Y
Sbjct: 2003 DRVTREACPELDYFVIFS--SVSCGRGNAGQANY 2034

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 28/161 (17%)

Query: 20  VTGGARGIGEATVRLFVKHGAKVVI------ADIDDAAGIALADSLLSSSPLVTYLHCDV 73
           VTGG  GIG    R   + GA  ++      AD   AA   L   L      VT   CD 
Sbjct: 244 VTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAA--ELRAELEQLGVRVTIAACDA 301

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           +  + +  L+   + +   L  +F++AGV  + +    + D    + D ++R  +  A  
Sbjct: 302 ADREALAALLA-ELPEDAPLTAVFHSAGVAHDDA---PVADLTLGQLDALMRAKLTAARH 357

Query: 134 ------GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY 168
                  +   A V+           +S A++ G  G   Y
Sbjct: 358 LHELTADLDLDAFVL----------FSSGAAVWGSGGQPGY 388

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 29/161 (18%)

Query: 20  VTGGARGIGEATVRLFVKHGAKVVI------ADIDDAAGIALADSLLSSSPLVTYLHCDV 73
           VTGG  G+G    R   + GA  ++       D D A    L   L +     T   CDV
Sbjct: 231 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAG--ELVAELEALGARTTVAACDV 288

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
           +  + ++ L+   I     L  +F+ A  L +     ++        +   R  V GA  
Sbjct: 289 TDRESVRELLG-GIGDDVPLSAVFHAAATLDDG----TVDTLTGERIERASRAKVLGARN 343

Query: 134 ------GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY 168
                  +   A V+           +S AS  G  G   Y
Sbjct: 344 LHELTRELDLTAFVL----------FSSFASAFGAPGLGGY 374

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 39.9 bits (93), Expect = 8e-04
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 12  TLEGKIAIVTGGARG-IGEATVRLFVKHGAKVVIA 45
           T + K  ++TG  +G IG   ++  ++ GAKVV+ 
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVT 507

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	285
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.88
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.88
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.85
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.85
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.85
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.85
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.85
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.85
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.82
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.82
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.81
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.81
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.81
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.8
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.79
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.79
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.76
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.75
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.75
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.71
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.69
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.69
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.66
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.66
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.65
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.62
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.62
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.6
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.59
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.41
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.41
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.18
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.13
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.91
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.86
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.85
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.75
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.72
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.66
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.65
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.6
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.58
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.58
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.58
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.5
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.5
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.45
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.44
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.37
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.37
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.33
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.25
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.25
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.25
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.24
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.23
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.23
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.17
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.15
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.13
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.1
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.03
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.03
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.03
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.01
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.01
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.96
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.94
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.91
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.87
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.86
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.85
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.85
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.85
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.82
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.82
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.81
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.81
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.78
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.77
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.76
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.76
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.73
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.68
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.66
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.66
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.61
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.61
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.58
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.56
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.56
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.53
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.53
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.49
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.46
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.45
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.39
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.39
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.36
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.34
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.31
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.3
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.3
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.28
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.25
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.24
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.23
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.22
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.19
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.18
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.14
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.13
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.11
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.09
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.08
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.07
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.05
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.05
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.04
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.03
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.02
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.99
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.96
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.91
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.89
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.87
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.83
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.83
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.8
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.77
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.76
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.73
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.65
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.65
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.64
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.63
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.62
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.62
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.62
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.61
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.61
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.59
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.58
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.56
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.56
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.56
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.55
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.53
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.5
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.47
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.46
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.46
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.46
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.45
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.41
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.41
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.38
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.36
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.34
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.33
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.33
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.31
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.29
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.27
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.24
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.23
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.2
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.2
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.19
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.19
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.17
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.17
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.14
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.13
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.13
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.1
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.1
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.08
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.06
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.03
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.03
1lnq_A	336	MTHK channels, potassium channel related protein;	96.0
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.98
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.95
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.93
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.92
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.9
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.9
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.87
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.87
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.86
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.83
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.83
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.79
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.79
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.77
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.77
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.72
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.71
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.66
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.65
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.63
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.63
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.58
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.55
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.55
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.52
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.52
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.5
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.38

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.5e-62  Score=413.68  Aligned_cols=252  Identities=30%  Similarity=0.513  Sum_probs=229.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.++
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ||+||+||||||+....   .++.+.+.++|++.+++|+.++|+++|+++|.|++++.|+||++||..+..+.++...|+
T Consensus        82 ~G~iDiLVNNAGi~~~~---~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~  158 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGV---TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYT  158 (254)
T ss_dssp             HSCCCEEEECCCCCCTT---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHH
T ss_pred             cCCCCEEEECCcccCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHH
Confidence            99999999999986432   678999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+.+|+|+||.||+++|||||+|+||+|+||+.......             .++...... ....|.+|+.+|||
T Consensus       159 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-------------~~~~~~~~~-~~~~~~~R~g~ped  224 (254)
T 4fn4_A          159 VAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP-------------SELGMRTLT-KLMSLSSRLAEPED  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC-------------CHHHHHHHH-HHHTTCCCCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC-------------cHHHHHHHH-hcCCCCCCCcCHHH
Confidence            9999999999999999999999999999999999987644321             111122222 22357799999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+|+.++|+|||+|.||||+++
T Consensus       225 iA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          225 IANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence            99999999999999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.8e-61  Score=406.95  Aligned_cols=250  Identities=28%  Similarity=0.366  Sum_probs=229.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.+++||++|+++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +|+||+||||||+...    .++.+.+.++|++.+++|+.|+|+++|+++|.|.+ +++|+||++||..+..+.|+...|
T Consensus        84 ~G~iDiLVNNAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (255)
T 4g81_D           84 GIHVDILINNAGIQYR----KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPY  159 (255)
T ss_dssp             TCCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHH
T ss_pred             CCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhH
Confidence            9999999999998654    78999999999999999999999999999999975 467999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+.+|+|+||.||+++|||||+|+||+|+||+......+               +...+.... ..|.+|+.+||
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~---------------~~~~~~~~~-~~Pl~R~g~pe  223 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED---------------KQFDSWVKS-STPSQRWGRPE  223 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC---------------HHHHHHHHH-HSTTCSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC---------------HHHHHHHHh-CCCCCCCcCHH
Confidence            99999999999999999999999999999999999998765432               112222221 36899999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|++++||+|+.++|+|||+|.|||||+..
T Consensus       224 diA~~v~fL~S~~a~~iTG~~i~VDGG~~Av  254 (255)
T 4g81_D          224 ELIGTAIFLSSKASDYINGQIIYVDGGWLAV  254 (255)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHhCchhCCCcCCEEEECCCeEee
Confidence            9999999999999999999999999999763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.1e-58  Score=395.90  Aligned_cols=250  Identities=28%  Similarity=0.387  Sum_probs=217.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |...|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++..+++|++|.++++++++++.+
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            334599999999999999999999999999999999999999998888877   67789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++|+||+||||||+...    .++.+.+.++|++.+++|+.++|+++|+++|.|++  .|+||+++|..+..+.|+...|
T Consensus       100 ~~G~iDiLVNNAG~~~~----~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y  173 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGSM----LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVY  173 (273)
T ss_dssp             HHSCEEEEEECCCCCCC----CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCC----CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHH
Confidence            99999999999998644    78999999999999999999999999999999954  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+.+|+|+||.||+++|||||+|+||+|+||+........         ....++..+.+..  ..|++|+.+||
T Consensus       174 ~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~---------~~~~~~~~~~~~~--~~PlgR~g~pe  242 (273)
T 4fgs_A          174 AASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKD---------PVQQQGLLNALAA--QVPMGRVGRAE  242 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------C---------HHHHHHHHHHHHH--HSTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccC---------chhhHHHHHHHHh--cCCCCCCcCHH
Confidence            999999999999999999999999999999999999876543220         0111222233333  36899999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+|+.++|+|||+|.||||++.
T Consensus       243 eiA~~v~FLaSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          243 EVAAAALFLASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHhCchhcCccCCeEeECcChhh
Confidence            999999999999999999999999999986

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.3e-58  Score=392.03  Aligned_cols=254  Identities=29%  Similarity=0.370  Sum_probs=217.0

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |.++|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.+.++.+++||++|+++++++++++.+
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999988754 4455666678899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +||++|+||||||+...     ...+.+.++|++.+++|+.+++.++|+++|.|+++ +|+||++||..+..+.|+...|
T Consensus        80 ~~G~iDiLVNnAGi~~~-----~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y  153 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDG-----IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGY  153 (258)
T ss_dssp             HHSCCCEEEECCCCCCC-----CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHH
T ss_pred             HhCCCCEEEECCCCCCC-----CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHH
Confidence            99999999999998532     33478999999999999999999999999999654 5999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc-CCCCCH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK-GVTLKA  247 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  247 (285)
                      ++||+|+.+|+|++|.||+++|||||+|+||+|+||+.+......          +..++...+...  ..|+ +|+.+|
T Consensus       154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~----------~~~~~~~~~~~~--~~plg~R~g~p  221 (258)
T 4gkb_A          154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATF----------EDPEAKLAEIAA--KVPLGRRFTTP  221 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---------------------CHHHHHHT--TCTTTTSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcc----------cChHHHHHHHHh--cCCCCCCCcCH
Confidence            999999999999999999999999999999999999987653320          011122233333  2456 589999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      ||+|++++||+|+.++|+|||+|.|||||+.-.+
T Consensus       222 eeiA~~v~fLaS~~a~~iTG~~i~VDGG~T~l~~  255 (258)
T 4gkb_A          222 DEIADTAVFLLSPRASHTTGEWLFVDGGYTHLDR  255 (258)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTSCT
T ss_pred             HHHHHHHHHHhCchhcCccCCeEEECCCcchhhh
Confidence            9999999999999999999999999999986443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.4e-58  Score=388.41  Aligned_cols=241  Identities=29%  Similarity=0.408  Sum_probs=214.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+..  ++..+.+.+.+.++.++++|++|+++++++++     +
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h
Confidence            5799999999999999999999999999999999999864  35566677778899999999999998877664     5


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||+...    .++.+++.++|++.+++|+.|+|+++|+++|.|++++ .|+||++||..+..+.++...|+
T Consensus        78 g~iDiLVNNAGi~~~----~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~  153 (247)
T 4hp8_A           78 AGFDILVNNAGIIRR----ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYT  153 (247)
T ss_dssp             TCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             CCCCEEEECCCCCCC----CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHH
Confidence            899999999998654    7899999999999999999999999999999997664 79999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+.+|+|+||.||+++|||||+|+||+|+||+......+              .+..+.+..  ..|++|+.+|||
T Consensus       154 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~--------------~~~~~~~~~--~~PlgR~g~pee  217 (247)
T 4hp8_A          154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD--------------AARNKAILE--RIPAGRWGHSED  217 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--------------HHHHHHHHT--TCTTSSCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC--------------HHHHHHHHh--CCCCCCCcCHHH
Confidence            9999999999999999999999999999999999998765432              112222222  368999999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+|++++|+||++|.|||||+.
T Consensus       218 iA~~v~fLaSd~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          218 IAGAAVFLSSAAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECccccc
Confidence            99999999999999999999999999975

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.1e-56  Score=383.08  Aligned_cols=252  Identities=21%  Similarity=0.226  Sum_probs=225.4

Q ss_pred             cccCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        10 ~~~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+.+.+ .++.++++|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            6899999999999875  99999999999999999999999999888888876644 57999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+++|++|+||||||+....+...++.+.+.++|...+++|+.+++.+.+++.+.++  ++|+||++||..+..+.|+..
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccch
Confidence            999999999999999876544446778899999999999999999999999998774  469999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+.+|+|+||.||+++|||||+|+||+|+|++.+....              .++..++...  ..|++|+.+
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~--------------~~~~~~~~~~--~~Pl~R~g~  222 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG--------------FNTILKEIKE--RAPLKRNVD  222 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT--------------HHHHHHHHHH--HSTTSSCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC--------------CHHHHHHHHh--cCCCCCCcC
Confidence            999999999999999999999999999999999999999765422              1223333333  368999999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |||+|++++||+|+.++|+|||+|.|||||+..
T Consensus       223 peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          223 QVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHhCchhcCccCCEEEECcCHHhc
Confidence            999999999999999999999999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=6.7e-57  Score=377.52  Aligned_cols=233  Identities=32%  Similarity=0.482  Sum_probs=203.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.+++      ....++..+++|++|+++++++++    ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~   78 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----ALPR   78 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hcCC
Confidence            599999999999999999999999999999999999876542      235678999999999999887764    6899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||+.      .++.+.+.++|++.+++|+.++|++.|+++|.|++ ++|+||++||..+..+.++...|++||
T Consensus        79 iDiLVNNAGi~------~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~~~~~~Y~asK  151 (242)
T 4b79_A           79 LDVLVNNAGIS------RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQ-RGGSILNIASMYSTFGSADRPAYSASK  151 (242)
T ss_dssp             CSEEEECCCCC------CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCEEEECCCCC------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeeccccCCCCCCHHHHHHH
Confidence            99999999985      45678899999999999999999999999999965 469999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+.+|+|+||.||+++|||||+|+||+|+|||......+              .+..+.+..  ..|++|+.+|||+|+
T Consensus       152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~--------------~~~~~~~~~--~~PlgR~g~peeiA~  215 (242)
T 4b79_A          152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD--------------VEATRRIMQ--RTPLARWGEAPEVAS  215 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC--------------HHHHHHHHH--TCTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC--------------HHHHHHHHh--cCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999997654322              122223333  368999999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++||+|++++|+|||+|.|||||..
T Consensus       216 ~v~fLaSd~a~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          216 AAAFLCGPGASFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCchhcCccCceEEECccHhh
Confidence            99999999999999999999999975

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=3.9e-56  Score=379.32  Aligned_cols=253  Identities=23%  Similarity=0.337  Sum_probs=214.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++.          ..+..++++|+++.++++++++++.+++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999976531          2344578999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-CCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-~~~~Y~  169 (285)
                      |++|+||||||+...  ...++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||+++|..+..+.| +...|+
T Consensus        77 G~iDilVnnAG~~~~--~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~  154 (261)
T 4h15_A           77 GGVDVIVHMLGGSSA--AGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYA  154 (261)
T ss_dssp             SSCSEEEECCCCCCC--CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHH
T ss_pred             CCCCEEEECCCCCcc--CCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHH
Confidence            999999999997543  22578999999999999999999999999999999998999999999999988876 578899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+.+|+|+||.||+++|||||+|+||+|+|++...........  .....+...+...+...  ..|.+|+.+|||
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~PlgR~g~pee  230 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQ--AGTDLEGGKKIIMDGLG--GIPLGRPAKPEE  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHH--TTCCHHHHHHHHHHHTT--CCTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHh--hccchhhHHHHHHHHhc--CCCCCCCcCHHH
Confidence            99999999999999999999999999999999999987654321100  00111111222222222  358899999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+|+.++|+|||+|.||||+...
T Consensus       231 vA~~v~fLaS~~a~~itG~~i~VDGG~v~T  260 (261)
T 4h15_A          231 VANLIAFLASDRAASITGAEYTIDGGTVPT  260 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSCC
T ss_pred             HHHHHHHHhCchhcCccCcEEEECCcCccc
Confidence            999999999999999999999999998643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.6e-55  Score=370.13  Aligned_cols=235  Identities=28%  Similarity=0.423  Sum_probs=209.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||+++|++|+++|++|++++|+++.+++..+    ...++.+++||++|+++++++++++.+++|++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4999999999999999999999999999999999877665443    356789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +||||||+...    .++.+.+.++|++.+++|+.++|.+.|+++|.|+++ +|+||++||..+..+.|+...|++||+|
T Consensus        78 iLVNNAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaa  152 (247)
T 3ged_A           78 VLVNNACRGSK----GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGG  152 (247)
T ss_dssp             EEEECCCCCCC----CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHH
Confidence            99999998644    789999999999999999999999999999999765 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +.+|+|+||.||++ |||||+|+||+|+|++......                    +...  ..|.+|+.+|||+|+++
T Consensus       153 l~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~--------------------~~~~--~~Pl~R~g~pediA~~v  209 (247)
T 3ged_A          153 IVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ--------------------EDCA--AIPAGKVGTPKDISNMV  209 (247)
T ss_dssp             HHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH--------------------HHHH--TSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH--------------------HHHh--cCCCCCCcCHHHHHHHH
Confidence            99999999999998 8999999999999988654321                    1112  35889999999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcccccccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTTSKNCV  283 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  283 (285)
                      +||+|+  +|+|||+|.||||++....|.
T Consensus       210 ~fL~s~--~~iTG~~i~VDGG~s~r~~~~  236 (247)
T 3ged_A          210 LFLCQQ--DFITGETIIVDGGMSKRMIYH  236 (247)
T ss_dssp             HHHHHC--SSCCSCEEEESTTGGGCCCCT
T ss_pred             HHHHhC--CCCCCCeEEECcCHHHhCccc
Confidence            999984  699999999999999865443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.4e-51  Score=353.44  Aligned_cols=260  Identities=23%  Similarity=0.247  Sum_probs=225.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCC-ceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSP-LVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~-~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+. ++.++++|++|.++++++++++
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999888888865 333 5999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus        82 ~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  157 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRV----STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMV  157 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCC----BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBH
T ss_pred             HHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCch
Confidence            9999999999999998643    678889999999999999999999999999999988899999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH-hhhhcccCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV-RGLANLKGVTL  245 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  245 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++..........       .....+.+.... .....|.+++.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~p~~r~~  230 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREE-------RELDWAQWTAQLARNKQIPLGRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-------------CHHHHHHHHHHHTTCTTCSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhh-------hccCHHHHHHHHhhccCCCcCCCc
Confidence            9999999999999999999999999999999999999998765432110       000111222211 11125789999


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|||+|++++||+|+.++|+||++|.+|||++..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCcCC
Confidence            9999999999999999999999999999999863

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-51  Score=353.62  Aligned_cols=253  Identities=27%  Similarity=0.411  Sum_probs=227.6

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|++|.++++++++++
T Consensus         3 ~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            3 GSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999999999999888887655 68999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGP  165 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~  165 (285)
                      .++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+. .+.++.
T Consensus        83 ~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  158 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPD----APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGW  158 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTC
T ss_pred             HHHhCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCC
Confidence            9999999999999998644    67888999999999999999999999999999988888999999999886 788889


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++.....                .+.......  ..|.+++.
T Consensus       159 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----------------~~~~~~~~~--~~p~~r~~  220 (262)
T 3pk0_A          159 SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG----------------EEYIASMAR--SIPAGALG  220 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC----------------HHHHHHHHT--TSTTSSCB
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC----------------HHHHHHHHh--cCCCCCCc
Confidence            999999999999999999999999999999999999999875321                112222222  35778899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +|||+|++++||+++.++|+||++|.+|||+++...+
T Consensus       221 ~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  257 (262)
T 3pk0_A          221 TPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPESL  257 (262)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCCSSG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCCeecCcch
Confidence            9999999999999999999999999999999987654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.2e-51  Score=352.07  Aligned_cols=250  Identities=32%  Similarity=0.446  Sum_probs=226.1

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999999988888778899999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      ++++++|+||||||+...    .++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus        85 ~~~g~id~lv~nAg~~~~----~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  159 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGP----KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMAS  159 (256)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCC----CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchH
Confidence            999999999999998654    455 789999999999999999999999999999888999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.......               +.......  ..|.+++.+|
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---------------~~~~~~~~--~~p~~r~~~~  222 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP---------------EIERAMLK--HTPLGRLGEA  222 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH---------------HHHHHHHT--TCTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH---------------HHHHHHHh--cCCCCCCCCH
Confidence            999999999999999999999999999999999999997654221               11222222  3577889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++++||+++.+.|+||++|.+|||+..+
T Consensus       223 ~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          223 QDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            99999999999999999999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.5e-52  Score=354.89  Aligned_cols=253  Identities=32%  Similarity=0.422  Sum_probs=226.5

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ...|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++++|++|.+++++++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999999999888888765 467899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLG  164 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~  164 (285)
                      +.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++
T Consensus        92 ~~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  167 (266)
T 4egf_A           92 AAEAFGGLDVLVNNAGISHP----QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD  167 (266)
T ss_dssp             HHHHHTSCSEEEEECCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT
T ss_pred             HHHHcCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC
Confidence            99999999999999998654    6788899999999999999999999999999998765 689999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|++||+|+++|+++++.|++++||+||+|+||+|+|++....+..              .+.......  ..|.+++
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~p~~r~  231 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD--------------EAKSAPMIA--RIPLGRF  231 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS--------------HHHHHHHHT--TCTTSSC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC--------------hHHHHHHHh--cCCCCCC
Confidence            999999999999999999999999999999999999999997754321              111222222  3578889


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .+|||+|++++||+++.++|+||++|.+|||++++
T Consensus       232 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~  266 (266)
T 4egf_A          232 AVPHEVSDAVVWLASDAASMINGVDIPVDGGYTMG  266 (266)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCHHHHHHHHHHHhCchhcCccCcEEEECCCccCC
Confidence            99999999999999999999999999999999863

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-51  Score=354.75  Aligned_cols=251  Identities=27%  Similarity=0.350  Sum_probs=227.3

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+++|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999998887788899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|
T Consensus       100 ~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  175 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFR----KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPY  175 (271)
T ss_dssp             HTCCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HCCCCCEEEECCCCCCC----CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhH
Confidence            99999999999998644    67888999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++.......              .+.......  ..|.+++.+||
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~p~~r~~~pe  239 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--------------PEFDAWVKA--RTPAKRWGKPQ  239 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--------------HHHHHHHHH--HSTTCSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--------------HHHHHHHHh--cCCCCCCcCHH
Confidence            99999999999999999999999999999999999997654321              111111222  35788999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|++++||+++.++|+||++|.+|||++.+
T Consensus       240 dva~~v~~L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          240 ELVGTAVFLSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence            9999999999999999999999999999764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.1e-51  Score=355.97  Aligned_cols=267  Identities=28%  Similarity=0.374  Sum_probs=221.3

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC----------------chhhHHHHHHhhcCCCceEEE
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID----------------DAAGIALADSLLSSSPLVTYL   69 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~----------------~~~~~~~~~~~~~~~~~v~~~   69 (285)
                      +..|+.++++|++|||||++|||+++|++|+++|++|++++|+                .+.+++..+.+.+.+.++.++
T Consensus         2 p~~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (286)
T 3uve_A            2 PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA   81 (286)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE
Confidence            3456678999999999999999999999999999999999987                667777777777777889999


Q ss_pred             eccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-Cc
Q 040531           70 HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SG  148 (285)
Q Consensus        70 ~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g  148 (285)
                      ++|++|.++++++++++.+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|
T Consensus        82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g  158 (286)
T 3uve_A           82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG---DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGG  158 (286)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999999999999999986442   3578899999999999999999999999999998765 79


Q ss_pred             eEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH
Q 040531          149 CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE  228 (285)
Q Consensus       149 ~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                      +||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++................+  . .+
T Consensus       159 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~-~~  235 (286)
T 3uve_A          159 SIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENP--G-PD  235 (286)
T ss_dssp             EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSC--C-HH
T ss_pred             EEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccccccc--c-hh
Confidence            99999999999999999999999999999999999999999999999999999999975321100000000011  1 11


Q ss_pred             HHHHHHh-hhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          229 KMEELVR-GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       229 ~~~~~~~-~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ....... ....| +++.+|+|+|++++||+|+.++|+||++|.||||++++
T Consensus       236 ~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          236 DMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             HHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            1111111 11233 78899999999999999999999999999999999863

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-51  Score=357.37  Aligned_cols=257  Identities=28%  Similarity=0.382  Sum_probs=220.0

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ...|+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++
T Consensus        20 ~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           20 FQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            34577899999999999999999999999999999999999999999999998777788999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc--CCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM--GGLG  164 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~--~~~~  164 (285)
                      .+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.++
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~  176 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVW---APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPG  176 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCB---CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTT
T ss_pred             HHHhCCCCEEEECCCCCCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCC
Confidence            99999999999999986432   578889999999999999999999999999999888889999999998877  7788


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH--HHHHHhhhhccc-
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK--MEELVRGLANLK-  241 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-  241 (285)
                      ...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........           ....  ......  ..|. 
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----------~~~~~~~~~~~~--~~p~~  243 (283)
T 3v8b_A          177 ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-----------EETAIPVEWPKG--QVPIT  243 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-----------HHHSCCCBCTTC--SCGGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-----------hhhhhhhhhhhh--cCccc
Confidence            89999999999999999999999999999999999999998764321100           0000  000001  1233 


Q ss_pred             -CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          242 -GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       242 -~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                       ++..+|||+|++++||+|+.++|+||++|.+|||+++.
T Consensus       244 ~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          244 DGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             TTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCcccc
Confidence             88899999999999999999999999999999998754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.4e-51  Score=348.56  Aligned_cols=244  Identities=31%  Similarity=0.465  Sum_probs=220.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.   .+..++++|++|.++++++++++.++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG---DNGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999998888877773   35788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        81 ~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (248)
T 3op4_A           81 FGGVDILVNNAGITRD----NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYA  156 (248)
T ss_dssp             HCCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHH
Confidence            9999999999998654    678889999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.+...+                +.......  ..|.+++.+|+|
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----------------~~~~~~~~--~~p~~r~~~p~d  218 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND----------------EQRTATLA--QVPAGRLGDPRE  218 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH----------------HHHHHHHH--TCTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH----------------HHHHHHHh--cCCCCCCcCHHH
Confidence            999999999999999999999999999999999998654211                11112222  357788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+++++.|+||++|.+|||+++
T Consensus       219 va~~v~~L~s~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          219 IASAVAFLASPEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHcCCccCCccCcEEEECCCeec
Confidence            99999999999999999999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=9.2e-51  Score=346.95  Aligned_cols=249  Identities=25%  Similarity=0.338  Sum_probs=224.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999997 88888888888888777788999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        83 id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (258)
T 3oid_A           83 LDVFVNNAASGVL----RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSK  158 (258)
T ss_dssp             CCEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHH
Confidence            9999999997543    678889999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+++|+++++.|++++||+||+|+||+|+|++.......              .+.......  ..|.+++.+|+|+|+
T Consensus       159 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~p~~r~~~~~dva~  222 (258)
T 3oid_A          159 AALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR--------------EDLLEDARQ--NTPAGRMVEIKDMVD  222 (258)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH--------------HHHHHHHHH--HCTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC--------------HHHHHHHHh--cCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999997653211              122222222  357889999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +++||+++.++|+||++|.+|||++....+
T Consensus       223 ~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  252 (258)
T 3oid_A          223 TVEFLVSSKADMIRGQTIIVDGGRSLLVLE  252 (258)
T ss_dssp             HHHHHTSSTTTTCCSCEEEESTTGGGBCC-
T ss_pred             HHHHHhCcccCCccCCEEEECCCccCCCCC
Confidence            999999999999999999999999987654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.3e-51  Score=352.90  Aligned_cols=252  Identities=29%  Similarity=0.411  Sum_probs=224.9

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +..|+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.+.+.++.++.+|++|.+++++++++
T Consensus        19 p~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (270)
T 3ftp_A           19 PGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES   98 (270)
T ss_dssp             ----CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH
Confidence            45566779999999999999999999999999999999999999999888888877677899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus        99 ~~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  174 (270)
T 3ftp_A           99 TLKEFGALNVLVNNAGITQD----QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ  174 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB
T ss_pred             HHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc
Confidence            99999999999999998654    56788999999999999999999999999999988888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++......                +.......  ..+.+++.
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----------------~~~~~~~~--~~p~~r~~  236 (270)
T 3ftp_A          175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ----------------EQQTALKT--QIPLGRLG  236 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH----------------HHHHHHHT--TCTTCSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH----------------HHHHHHHh--cCCCCCCC
Confidence            9999999999999999999999999999999999999999764311                11112222  35778899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|||+|++++||+++.+.++||++|.+|||+.++
T Consensus       237 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          237 SPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred             CHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence            9999999999999999999999999999999764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-51  Score=353.31  Aligned_cols=255  Identities=34%  Similarity=0.502  Sum_probs=225.3

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|.++++++++++.+
T Consensus         2 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            2 VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999999999999988877778899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~~  167 (285)
                      +++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+. .+.++...
T Consensus        82 ~~g~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  158 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAM---GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAP  158 (280)
T ss_dssp             HHSCCCEEEECCCCCCSC---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHH
T ss_pred             HcCCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchh
Confidence            999999999999986432   57888999999999999999999999999999998889999999999887 67888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.......         ...   +.. ..... ..+.+++.+|
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------~~~---~~~-~~~~~-~~p~~r~~~p  224 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG---------AAP---ETR-GFVEG-LHALKRIARP  224 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT---------CCT---HHH-HHHHT-TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc---------cCH---HHH-HHHhc-cCccCCCcCH
Confidence            999999999999999999999999999999999999987653211         001   111 11111 3567889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|+|++++||+++.++|+||++|.+|||++...
T Consensus       225 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          225 EEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            999999999999999999999999999998864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-51  Score=350.66  Aligned_cols=261  Identities=20%  Similarity=0.256  Sum_probs=225.5

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+|+..|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (264)
T 3ucx_A            3 GSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET   82 (264)
T ss_dssp             ----CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            44556789999999999999999999999999999999999999999999988877888999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .++++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++..
T Consensus        83 ~~~~g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  158 (264)
T 3ucx_A           83 MKAYGRVDVVINNAFRVPS---MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYG  158 (264)
T ss_dssp             HHHTSCCSEEEECCCSCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCH
T ss_pred             HHHcCCCcEEEECCCCCCC---CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccH
Confidence            9999999999999998533   26788999999999999999999999999999997654 9999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++....+......     ......+.......  ..|.+++.+
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~p~~r~~~  231 (264)
T 3ucx_A          159 AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGK-----YGTSVEDIYNAAAA--GSDLKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHH-----TTCCHHHHHHHHHT--TSSSSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhh-----cCCCHHHHHHHHhc--cCCcccCCC
Confidence            99999999999999999999999999999999999999987654321000     00001122222222  357889999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |||+|++++||+++.++|+||++|.+|||+++
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            99999999999999999999999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.5e-51  Score=351.04  Aligned_cols=255  Identities=26%  Similarity=0.334  Sum_probs=224.6

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC---ceEEEeccCCCHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP---LVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~s~~~~i~~~   82 (285)
                      |..|++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.   ++.++++|++|.++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (281)
T 3svt_A            2 PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA   81 (281)
T ss_dssp             ------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence            45677899999999999999999999999999999999999999999998888876554   789999999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG  162 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~  162 (285)
                      ++++.+.++++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.
T Consensus        82 ~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  158 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGGSENI---GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH  158 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC
Confidence            999999999999999999974332   57888999999999999999999999999999998889999999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......           .   +.......  ..|.+
T Consensus       159 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----------~---~~~~~~~~--~~p~~  222 (281)
T 3svt_A          159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-----------A---ELSSDYAM--CTPLP  222 (281)
T ss_dssp             TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-----------H---HHHHHHHH--HCSSS
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-----------H---HHHHHHHh--cCCCC
Confidence            99999999999999999999999999999999999999999997654221           1   11122222  35788


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++.+|+|+|++++||+++.++++||+.|.+|||++..
T Consensus       223 r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          223 RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            9999999999999999999999999999999999886

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-50  Score=352.66  Aligned_cols=268  Identities=28%  Similarity=0.395  Sum_probs=221.4

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------chhhHHHHHHhhcCCCceEEEeccC
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID------------DAAGIALADSLLSSSPLVTYLHCDV   73 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~   73 (285)
                      +..|+.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.+.++.++++|+
T Consensus        19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   98 (299)
T 3t7c_A           19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV   98 (299)
T ss_dssp             ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            4456667999999999999999999999999999999999987            6677777777777778899999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEE
Q 040531           74 SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIIS  152 (285)
Q Consensus        74 s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~  152 (285)
                      +|.++++++++++.+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||+
T Consensus        99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~  175 (299)
T 3t7c_A           99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEG---TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVF  175 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC---CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            999999999999999999999999999987542   3478899999999999999999999999999987654 799999


Q ss_pred             EcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH
Q 040531          153 TASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE  232 (285)
Q Consensus       153 vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      +||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........................
T Consensus       176 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (299)
T 3t7c_A          176 TSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR  255 (299)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred             ECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999753211000000000011111111111


Q ss_pred             HHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          233 LVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ...  ..+ +++.+|+|+|++++||+|+.++|+||++|.+|||+++.
T Consensus       256 ~~~--~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          256 QMH--VLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             HHS--SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhc--ccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            111  223 77889999999999999999999999999999999763

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-50  Score=352.43  Aligned_cols=253  Identities=27%  Similarity=0.411  Sum_probs=226.9

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      ++..|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|++|.++++++++
T Consensus        32 ~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           32 ERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             --CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence            3456778999999999999999999999999999999999999999999998887665 689999999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCC
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGL  163 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~  163 (285)
                      ++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+. .+.+
T Consensus       112 ~~~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~  187 (293)
T 3rih_A          112 TVVDAFGALDVVCANAGIFPE----ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYP  187 (293)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCT
T ss_pred             HHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCC
Confidence            999999999999999998644    67888999999999999999999999999999988888999999999886 7888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+                +.......  ..|.++
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~----------------~~~~~~~~--~~p~~r  249 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE----------------EYISGMAR--SIPMGM  249 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH----------------HHHHHHHT--TSTTSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH----------------HHHHHHHh--cCCCCC
Confidence            899999999999999999999999999999999999999998754311                12222222  357788


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +.+|+|+|++++||+++.++|+||++|.+|||+++..
T Consensus       250 ~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~  286 (293)
T 3rih_A          250 LGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPE  286 (293)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCBS
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCCC
Confidence            9999999999999999999999999999999998754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.5e-50  Score=346.75  Aligned_cols=255  Identities=33%  Similarity=0.499  Sum_probs=224.3

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999888877765   56789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|
T Consensus        98 ~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 4dqx_A           98 KWGRVDVLVNNAGFGTT----GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAY  173 (277)
T ss_dssp             HHSCCCEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhH
Confidence            99999999999998644    57788999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++........          ....+.......  ..+.+++.+||
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~r~~~pe  241 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEA----------KDPAKLRSDFNA--RAVMDRMGTAE  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTC----------SCHHHHHHHHHT--TSTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccc----------cchhHHHHHHHh--cCcccCCcCHH
Confidence            999999999999999999999999999999999999955433210          011111111222  35778899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |+|++++||+++.++|+||++|.+|||++.+...
T Consensus       242 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  275 (277)
T 4dqx_A          242 EIAEAMLFLASDRSRFATGSILTVDGGSSIGNHL  275 (277)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSSSSCCTT
T ss_pred             HHHHHHHHHhCCccCCCcCCEEEECCchhhhhcc
Confidence            9999999999999999999999999999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.5e-50  Score=343.42  Aligned_cols=244  Identities=29%  Similarity=0.432  Sum_probs=219.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            5789999999999999999999999999999999999999988887777   6679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|+
T Consensus        79 g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (247)
T 3rwb_A           79 GGIDILVNNASIVPF----VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYV  154 (247)
T ss_dssp             SCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHH
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhH
Confidence            999999999998643    6788899999999999999999999999999998765 79999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.......            .. .....    ...+.++..+|||
T Consensus       155 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~------------~~-~~~~~----~~~~~~r~~~ped  217 (247)
T 3rwb_A          155 AAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN------------EA-FGFVE----MLQAMKGKGQPEH  217 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG------------GG-HHHHH----HHSSSCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh------------HH-HHHHh----cccccCCCcCHHH
Confidence            9999999999999999999999999999999999987643211            11 11111    1246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+++.++|+||++|.+|||++.
T Consensus       218 va~~v~~L~s~~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          218 IADVVSFLASDDARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99999999999999999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3e-50  Score=347.88  Aligned_cols=264  Identities=25%  Similarity=0.369  Sum_probs=221.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------chhhHHHHHHhhcCCCceEEEeccCCCH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID------------DAAGIALADSLLSSSPLVTYLHCDVSLE   76 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~s~~   76 (285)
                      .|++|++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.+.+.++.++++|++|.
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            4678999999999999999999999999999999999997            5566666666666678899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ++++++++++.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~  159 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTI----ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM  159 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCC----CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            99999999999999999999999998644    67888999999999999999999999999999988888999999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          157 ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       157 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........  .......... +........
T Consensus       160 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~  236 (281)
T 3s55_A          160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGT--MRPDLEKPTL-KDVESVFAS  236 (281)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC---------CCH-HHHHHHHHH
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcc--ccccccccch-hHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999998764221100  0000000011 111111111


Q ss_pred             hhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       237 ~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .....+++.+|+|+|++++||+++.++++||++|.+|||++.+
T Consensus       237 ~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          237 LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            1223378899999999999999999999999999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.8e-50  Score=344.51  Aligned_cols=251  Identities=29%  Similarity=0.394  Sum_probs=219.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +|.+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            355799999999999999999999999999999999999999888877776   46789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|
T Consensus        79 ~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  152 (255)
T 4eso_A           79 TLGAIDLLHINAGVSEL----EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVY  152 (255)
T ss_dssp             HHSSEEEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHH
T ss_pred             HhCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHH
Confidence            99999999999998643    67888999999999999999999999999999964  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++.......           ....+........ ..|.+++.+||
T Consensus       153 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----------~~~~~~~~~~~~~-~~p~~r~~~pe  220 (255)
T 4eso_A          153 SASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGIT-----------EAERAEFKTLGDN-ITPMKRNGTAD  220 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSC-----------HHHHHHHHHHHHH-HSTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCC-----------hhhHHHHHHHHhc-cCCCCCCcCHH
Confidence            99999999999999999999999999999999999986532111           1122222222222 35788999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      |+|++++||+++ ++|+||++|.+|||++.+.+
T Consensus       221 dvA~~v~~L~s~-~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          221 EVARAVLFLAFE-ATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             HHHHHHHHHHHT-CTTCCSCEEEESTTTTTTBC
T ss_pred             HHHHHHHHHcCc-CcCccCCEEEECCCccccCc
Confidence            999999999998 89999999999999987643

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-50  Score=349.88  Aligned_cols=263  Identities=29%  Similarity=0.414  Sum_probs=214.2

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      ...++++|++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+. +.++.++++|++|.+++++++
T Consensus        16 ~n~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   95 (281)
T 3v2h_A           16 ENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMM   95 (281)
T ss_dssp             ------CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHH
T ss_pred             cchhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHH
Confidence            445678899999999999999999999999999999999999 566677777777654 567999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+
T Consensus        96 ~~~~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  171 (281)
T 3v2h_A           96 AMVADRFGGADILVNNAGVQFV----EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP  171 (281)
T ss_dssp             HHHHHHTSSCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHCCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC
Confidence            9999999999999999998644    678889999999999999999999999999999888889999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+....     .......+...+.+. ...|.++
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~p~~r  245 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR-----TRGITEEQVINEVML-KGQPTKK  245 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhh-----hcCCCHHHHHHHHHH-hcCCCCC
Confidence            9999999999999999999999999999999999999999997654332100     000011111111111 1357788


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+|+|+|++++||+++.+.++||++|.+|||++.
T Consensus       246 ~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          246 FITVEQVASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             CBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             ccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-50  Score=348.07  Aligned_cols=262  Identities=27%  Similarity=0.353  Sum_probs=218.0

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-------------CchhhHHHHHHhhcCCCceEEEecc
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-------------DDAAGIALADSLLSSSPLVTYLHCD   72 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~D   72 (285)
                      +..|+.++++|++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.+.+.++.++++|
T Consensus         2 p~~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   81 (277)
T 3tsc_A            2 PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVD   81 (277)
T ss_dssp             -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECC
Confidence            455677899999999999999999999999999999999998             6677777777777777889999999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEE
Q 040531           73 VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCII  151 (285)
Q Consensus        73 ~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii  151 (285)
                      ++|.++++++++++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||
T Consensus        82 ~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv  157 (277)
T 3tsc_A           82 TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP----QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSII  157 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            999999999999999999999999999998754    5788899999999999999999999999999998765 78999


Q ss_pred             EEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHH
Q 040531          152 STASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME  231 (285)
Q Consensus       152 ~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      ++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++............      ........
T Consensus       158 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~------~~~~~~~~  231 (277)
T 3tsc_A          158 LISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQA------METNPQLS  231 (277)
T ss_dssp             EECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHH------HHTCGGGT
T ss_pred             EEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhc------ccccHHHH
Confidence            999999999999999999999999999999999999999999999999999999754211000000      00000000


Q ss_pred             HHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          232 ELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ..... ..+ .++.+|||+|++++||+++.++|+||++|.+|||++.+
T Consensus       232 ~~~~~-~~p-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  277 (277)
T 3tsc_A          232 HVLTP-FLP-DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQY  277 (277)
T ss_dssp             TTTCC-SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhhh-ccC-CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcccC
Confidence            00000 112 36789999999999999999999999999999999763

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.3e-50  Score=347.52  Aligned_cols=246  Identities=28%  Similarity=0.432  Sum_probs=210.6

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+|+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999888877665   5679999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus        97 ~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  172 (266)
T 3grp_A           97 REMEGIDILVNNAGITRD----GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTN  172 (266)
T ss_dssp             HHHTSCCEEEECCCCC---------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHH
T ss_pred             HHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchh
Confidence            999999999999998644    5778889999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.....+                +.......  ..|.+++.+|
T Consensus       173 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~----------------~~~~~~~~--~~p~~r~~~~  234 (266)
T 3grp_A          173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNE----------------KQKEAIMA--MIPMKRMGIG  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCH----------------HHHHHHHT--TCTTCSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCH----------------HHHHHHHh--cCCCCCCcCH
Confidence            99999999999999999999999999999999999998764311                11122222  3578899999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ||+|++++||+++.++|+||++|.+|||+++
T Consensus       235 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          235 EEIAFATVYLASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             HHHHHHHHHHhCccccCccCCEEEECCCeee
Confidence            9999999999999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.2e-50  Score=343.74  Aligned_cols=257  Identities=33%  Similarity=0.432  Sum_probs=220.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ||+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            577899999999999999999999999999999999999999988887777   55789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...
T Consensus        79 ~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDL----APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAI  154 (259)
T ss_dssp             HSSSCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHH
T ss_pred             HcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChH
Confidence            99999999999998644    5788899999999999999999999999999997765 799999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++........... .. ....+   .......  ..|.+++.+|
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~--~~p~~r~~~~  227 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARY-EN-RPRGE---KKRLVGE--AVPFGRMGTA  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHH-HT-CCTTH---HHHHHHH--HSTTSSCBCT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhh-cc-CChHH---HHHHHhc--cCCCCCCcCH
Confidence            9999999999999999999999999999999999999876431100000 00 00011   1111111  3578899999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++++||+++.++|+||++|.+|||++.+
T Consensus       228 ~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          228 EDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            99999999999999999999999999998764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.9e-50  Score=346.83  Aligned_cols=256  Identities=27%  Similarity=0.327  Sum_probs=222.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.++++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35899999999999999999999999999999999999999999998887788899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHH--hhcCCCCceEEEEcccccccCCCCCccch
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAK--VMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|  .|++++.|+||++||..+..+.++...|+
T Consensus       101 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  176 (279)
T 3sju_A          101 PIGILVNSAGRNGG----GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT  176 (279)
T ss_dssp             SCCEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH
Confidence            99999999998654    6788899999999999999999999999999  57777789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++...........     ......+.......  ..|.+++.+|||
T Consensus       177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~p~~r~~~ped  249 (279)
T 3sju_A          177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARH-----WGVTEQEVHERFNA--KIPLGRYSTPEE  249 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSS-----SCCCHHHHHHHHHT--TCTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhc-----ccCChHHHHHHHHh--cCCCCCCCCHHH
Confidence            99999999999999999999999999999999999987654321110     00011222222222  357788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+++.++++||++|.+|||++.
T Consensus       250 vA~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          250 VAGLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             HHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            99999999999999999999999999975

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.8e-50  Score=347.33  Aligned_cols=251  Identities=35%  Similarity=0.462  Sum_probs=219.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999888887777   5678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus       102 g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  177 (277)
T 3gvc_A          102 GGVDKLVANAGVVHL----ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGM  177 (277)
T ss_dssp             SSCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHH
Confidence            999999999998644    5778899999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+++|+++++.|++++||+||+|+||+|+|++..........         ...+......  ...+.+++.+|||+
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---------~~~~~~~~~~--~~~~~~r~~~pedv  246 (277)
T 3gvc_A          178 SKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG---------ALGAGGARSM--IARLQGRMAAPEEM  246 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------------CCHHHH--HHHHHSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh---------hHHHHhhhhh--hhccccCCCCHHHH
Confidence            999999999999999999999999999999999997754321000         0000000000  12356788999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |++++||+++.++++||++|.+|||++.+
T Consensus       247 A~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          247 AGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            99999999999999999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.9e-50  Score=345.88  Aligned_cols=247  Identities=32%  Similarity=0.494  Sum_probs=220.1

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++.+++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+.+.+.+.++.++++|++|.++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4456899999999999999999999999999999999988 566677777777777788999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus       101 ~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  176 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRD----TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQA  176 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCch
Confidence            9999999999999998654    578889999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++......                   .....  ..|.+++.+
T Consensus       177 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------------~~~~~--~~p~~r~~~  235 (269)
T 4dmm_A          177 NYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------------------EKLLE--VIPLGRYGE  235 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------------------HHHGG--GCTTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------------------HHHHh--cCCCCCCCC
Confidence            999999999999999999999999999999999999998653211                   11111  357788999


Q ss_pred             HHHHHHHHHHHhcC-CCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASD-ESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~-~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|+|++++||+++ .+.|+||++|.+|||++++
T Consensus       236 ~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          236 AAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             HHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             HHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence            99999999999998 7899999999999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.8e-50  Score=348.16  Aligned_cols=250  Identities=25%  Similarity=0.349  Sum_probs=223.0

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999999999988888778889999999999999999999998


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +. +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....
T Consensus       106 ~~-g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~  180 (275)
T 4imr_A          106 AI-APVDILVINASAQIN----ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTA  180 (275)
T ss_dssp             HH-SCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHH
T ss_pred             Hh-CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchh
Confidence            87 899999999998654    5788899999999999999999999999999998888899999999999888888888


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.......             ..+........ ..+.+++.+|
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------------~~~~~~~~~~~-~~p~~r~~~p  246 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ-------------DPEGWDEYVRT-LNWMGRAGRP  246 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH-------------CHHHHHHHHHH-HSTTCSCBCG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc-------------ChHHHHHHHhh-cCccCCCcCH
Confidence            999999999999999999999999999999999999987654221             11222222222 2377899999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ||+|++++||+++.++|+||++|.+|||+
T Consensus       247 edvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          247 EEMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence            99999999999999999999999999996

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=6.8e-50  Score=344.78  Aligned_cols=246  Identities=30%  Similarity=0.428  Sum_probs=220.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.++
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999988877788999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCC--CCCc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGG--LGPH  166 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~--~~~~  166 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.  ++..
T Consensus       107 ~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~  182 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSV----QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVS  182 (276)
T ss_dssp             HSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCH
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcc
Confidence            9999999999998654    5778899999999999999999999999999998766 4999999999887654  3568


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+....              .   .....  ...|.+++.+
T Consensus       183 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--------------~---~~~~~--~~~p~~r~~~  243 (276)
T 3r1i_A          183 HYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD--------------Y---HALWE--PKIPLGRMGR  243 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG--------------G---HHHHG--GGSTTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH--------------H---HHHHH--hcCCCCCCcC
Confidence            899999999999999999999999999999999999998764311              1   11111  1357788999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |||+|++++||+++.++|+||++|.+|||++.
T Consensus       244 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          244 PEELTGLYLYLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GGGSHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECcCccC
Confidence            99999999999999999999999999999975

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-50  Score=344.24  Aligned_cols=250  Identities=30%  Similarity=0.425  Sum_probs=218.6

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +..|++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.+++++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   78 (271)
T 3tzq_B            2 PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDF   78 (271)
T ss_dssp             -----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHH
Confidence            445677899999999999999999999999999999999999999988887777   56789999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.++++++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus        79 ~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  156 (271)
T 3tzq_B           79 TIDTFGRLDIVDNNAAHSDP--ADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS  156 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCT--TCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC
Confidence            99999999999999998632  1256778999999999999999999999999999998889999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++.......               +.......  ..+.+++.
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~r~~  219 (271)
T 3tzq_B          157 TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ---------------PIVDIFAT--HHLAGRIG  219 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CH---------------HHHHHHHT--TSTTSSCB
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCH---------------HHHHHHHh--cCCCCCCc
Confidence            99999999999999999999999999999999999999986532211               11122222  35778899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+|+|++++||+++.++|+||++|.+|||+.
T Consensus       220 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  251 (271)
T 3tzq_B          220 EPHEIAELVCFLASDRAAFITGQVIAADSGLL  251 (271)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCcccCCcCCCEEEECCCcc
Confidence            99999999999999999999999999999944

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-50  Score=349.29  Aligned_cols=254  Identities=24%  Similarity=0.350  Sum_probs=203.7

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +.+|.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.+.++.++++|++|.+++++++++
T Consensus        21 ~~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           21 QSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             --CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred             hhhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            44667899999999999999999999999999999999995 67777777788877778899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGG  162 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~  162 (285)
                      +.++++++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|++++   .|+||++||..+..+.
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  178 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASI--VRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS  178 (280)
T ss_dssp             HHHHHSCCCEEEEECC--------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------
T ss_pred             HHHHcCCCCEEEECCCcccc--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC
Confidence            99999999999999998421  126788899999999999999999999999999997655   7899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......                 ..........|.+
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~~~p~~  241 (280)
T 4da9_A          179 PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-----------------YDGLIESGLVPMR  241 (280)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-----------------HHHHHhhcCCCcC
Confidence            99999999999999999999999999999999999999999987643211                 0011111124678


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++.+|||+|++++||+++.++|+||++|.+|||+++.
T Consensus       242 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          242 RWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             CcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            8999999999999999999999999999999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=7.7e-50  Score=342.89  Aligned_cols=260  Identities=24%  Similarity=0.314  Sum_probs=221.4

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .|.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  ..++.++.+|+++.+++++++  
T Consensus         3 ~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~--   80 (267)
T 3t4x_A            3 AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI--   80 (267)
T ss_dssp             CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH--
T ss_pred             ccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH--
Confidence            4667899999999999999999999999999999999999999998888888654  356888999999999887765  


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                        ++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus        81 --~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  154 (267)
T 3t4x_A           81 --EKYPKVDILINNLGIFEP----VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM  154 (267)
T ss_dssp             --HHCCCCSEEEECCCCCCC----CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC
T ss_pred             --HhcCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc
Confidence              457899999999998654    57888999999999999999999999999999988888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh--hcccCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL--ANLKGV  243 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  243 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++..........  ...   ....+.........  ..+.++
T Consensus       155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~r  229 (267)
T 3t4x_A          155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYP--NEQ---LTIEEAEKRFMKENRPTSIIQR  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSST--TSC---CCHHHHHHHHHHHHCTTCSSCS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCc--ccC---CCHHHHHHHHhhccCCcccccC
Confidence            99999999999999999999999999999999999999987765432110  000   11112222222211  235789


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +.+|||+|++++||+++.++|+||++|.+|||++.+.
T Consensus       230 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~si  266 (267)
T 3t4x_A          230 LIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRSV  266 (267)
T ss_dssp             CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCSC
T ss_pred             ccCHHHHHHHHHHHcCccccCccCCeEEECCCccccc
Confidence            9999999999999999999999999999999998763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5.5e-50  Score=346.10  Aligned_cols=251  Identities=28%  Similarity=0.429  Sum_probs=217.8

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-------------CchhhHHHHHHhhcCCCceEEEeccCC
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-------------DDAAGIALADSLLSSSPLVTYLHCDVS   74 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~D~s   74 (285)
                      ..|.++++|++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.+.+.++.++++|++
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            4566899999999999999999999999999999999998             677778888888777788999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEE
Q 040531           75 LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIIST  153 (285)
Q Consensus        75 ~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~v  153 (285)
                      |.++++++++++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSW----GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV  163 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            9999999999999999999999999998654    5788899999999999999999999999999998765 7999999


Q ss_pred             cccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH-
Q 040531          154 ASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE-  232 (285)
Q Consensus       154 ss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  232 (285)
                      ||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......               +.... 
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---------------~~~~~~  228 (280)
T 3pgx_A          164 SSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMM---------------EIFARH  228 (280)
T ss_dssp             CCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHH---------------HHHHHC
T ss_pred             cchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhh---------------hhhhcC
Confidence            99999999999999999999999999999999999999999999999999986532100               00000 


Q ss_pred             --HHhh----hhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          233 --LVRG----LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       233 --~~~~----~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        ....    ...+. ++.+|||+|++++||+++.++|+||++|.+|||++.
T Consensus       229 ~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          229 PSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             GGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             chhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence              0000    01223 578999999999999999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=9.7e-50  Score=343.29  Aligned_cols=248  Identities=28%  Similarity=0.426  Sum_probs=218.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+ +..++..+++.+.+.++.++++|++|.++++++.+ ..++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~  103 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAA  103 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHh
Confidence            357899999999999999999999999999999999965 55677777777777889999999999999999954 4566


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus       104 ~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  179 (273)
T 3uf0_A          104 TRRVDVLVNNAGIIAR----APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYA  179 (273)
T ss_dssp             HSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             cCCCcEEEECCCCCCC----CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHH
Confidence            7999999999998654    678889999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.......              .+.......  ..|.+++.+|||
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~p~~r~~~ped  243 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD--------------DERAAEITA--RIPAGRWATPED  243 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--------------HHHHHHHHH--HSTTSSCBCGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC--------------HHHHHHHHh--cCCCCCCCCHHH
Confidence            9999999999999999999999999999999999987654221              112222222  357789999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.++++||++|.+|||++.+
T Consensus       244 va~~v~~L~s~~a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          244 MVGPAVFLASDAASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECcCccCC
Confidence            999999999999999999999999999764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=4.5e-50  Score=346.13  Aligned_cols=253  Identities=24%  Similarity=0.301  Sum_probs=223.5

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+..|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++++|++|.++++++++++.
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34468999999999999999999999999999999999999988888877754 35689999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      ++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus       101 ~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFL----CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVH  176 (277)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHH
T ss_pred             HHcCCCCEEEECCcCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHH
Confidence            999999999999997643    6788899999999999999999999999999998877899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.......             ..+.......  ..|.+++.+|
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-------------~~~~~~~~~~--~~p~~r~~~p  241 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG-------------PQASLSTKVT--ASPLQRLGNK  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC-------------CHHHHHHHHH--TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC-------------CHHHHHHHhc--cCCCCCCcCH
Confidence            999999999999999999999999999999999999875433211             0112222222  3578899999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|+|++++||+++.++|+||++|.+|||+++..
T Consensus       242 ~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          242 TEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             HHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            999999999999999999999999999997653

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.1e-49  Score=340.70  Aligned_cols=259  Identities=24%  Similarity=0.338  Sum_probs=219.0

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ..++.+|++|++|||||++|||++++++|+++|++|++++++ .+.+++..+++.+.+.++.++++|++|.+++++++++
T Consensus        10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            345567999999999999999999999999999999998765 5566777777777778899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc-cccCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA-SLMGGLG  164 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~-~~~~~~~  164 (285)
                      +.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||.. +..+.++
T Consensus        90 ~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  163 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVSF----GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPK  163 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTT
T ss_pred             HHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCC
Confidence            99999999999999998644    67888999999999999999999999999999964  68999999987 5667888


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........    .......+.......  ..|.+++
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~p~~r~  237 (270)
T 3is3_A          164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN----GTSYTAEQRQQMAAH--ASPLHRN  237 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTT----GGGSCHHHHHHHHHH--HSTTCSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhcccc----ccccchHHHHHHHHh--cCCCCCC
Confidence            9999999999999999999999999999999999999999987532211000    000011111122222  3578999


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .+|+|+|++++||+++.++|+||++|.+|||+.
T Consensus       238 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          238 GWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            999999999999999999999999999999974

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.3e-50  Score=342.06  Aligned_cols=251  Identities=29%  Similarity=0.383  Sum_probs=220.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999999999999999999999998887777889999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc-CCCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|. ++..|+||++||..+..+.++...|+
T Consensus        82 g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (257)
T 3imf_A           82 GRIDILINNAAGNFI----CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSA  157 (257)
T ss_dssp             SCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHH
Confidence            999999999997643    6788899999999999999999999999999994 45589999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhC-CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELG-KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +||+|+++|+++++.|++ ++||+||+|+||+|+|++........             .+.......  ..|.+++.+||
T Consensus       158 asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~-------------~~~~~~~~~--~~p~~r~~~pe  222 (257)
T 3imf_A          158 AAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS-------------EEMAKRTIQ--SVPLGRLGTPE  222 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------------------CCSHHHHT--TSTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC-------------HHHHHHHHh--cCCCCCCcCHH
Confidence            999999999999999997 77999999999999998754321100             000111111  35778899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++||+++.++|+||++|.+|||+++..
T Consensus       223 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          223 EIAGLAYYLCSDEAAYINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTTSCC
T ss_pred             HHHHHHHHHcCchhcCccCCEEEECCCcccCC
Confidence            99999999999999999999999999998753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=9.8e-50  Score=338.24  Aligned_cols=244  Identities=29%  Similarity=0.447  Sum_probs=218.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +.+|++|||||++|||++++++|+++|++|++++++ .+.+++..+++.+.+.++.++++|++|.++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999998874 5677777777777778899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        82 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (246)
T 3osu_A           82 SLDVLVNNAGITRD----NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT  157 (246)
T ss_dssp             CCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHH
Confidence            99999999998654    57888999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+++++.|++++||+||+|+||+|+|++.....+                +.......  ..|.+++.+|+|+|
T Consensus       158 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----------------~~~~~~~~--~~p~~r~~~~~dva  219 (246)
T 3osu_A          158 KAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD----------------ELKEQMLT--QIPLARFGQDTDIA  219 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH----------------HHHHHHHT--TCTTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH----------------HHHHHHHh--cCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999998653211                11122222  35778899999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+++.+.++||++|.+|||+++
T Consensus       220 ~~v~~l~s~~~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          220 NTVAFLASDKAKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHhCccccCCCCCEEEeCCCccC
Confidence            999999999999999999999999864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.2e-49  Score=340.17  Aligned_cols=251  Identities=25%  Similarity=0.360  Sum_probs=208.7

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .++++++|++|||||++|||++++++|+++|++|+++ +++.+..++..+++.+.+.++.++++|++|.++++++++++.
T Consensus         2 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            2 SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999998 667777777778887777889999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~  166 (285)
                      ++++++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+. .+.++..
T Consensus        82 ~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  156 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIAR---KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGAL  156 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCH
T ss_pred             HHhCCCCEEEECCCccCCC---CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcH
Confidence            9999999999999976332   67889999999999999999999999999999965  6899999999888 6788899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++ |+||+|+||+|+|++.......               +.......  ..|.++..+
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~---------------~~~~~~~~--~~p~~r~~~  218 (259)
T 3edm_A          157 AYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKP---------------EVRERVAG--ATSLKREGS  218 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC---------------------------------------CCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccCh---------------HHHHHHHh--cCCCCCCcC
Confidence            99999999999999999999987 9999999999999987653211               11111111  246788899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |||+|++++||+++.++|+||++|.+|||++.+..+
T Consensus       219 pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~~~  254 (259)
T 3edm_A          219 SEDVAGLVAFLASDDAAYVTGACYDINGGVLFSEGH  254 (259)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC---
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEECCCcCCCCCC
Confidence            999999999999999999999999999999987765

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.3e-49  Score=337.11  Aligned_cols=241  Identities=23%  Similarity=0.343  Sum_probs=214.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccC--CCHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDV--SLEQDIQNLINVT   86 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~--s~~~~i~~~~~~i   86 (285)
                      ...|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.. .++.++.+|+  ++.++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999999988888876543 3788999999  9999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus        87 ~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  163 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDV---CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG  163 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCC---SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCH
T ss_pred             HHhCCCCCEEEECCccCCCC---CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCc
Confidence            99999999999999985332   578889999999999999999999999999999988899999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++ |+||+|+||+|+|++.....+.                          .+..++.+
T Consensus       164 ~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~--------------------------~~~~~~~~  216 (252)
T 3f1l_A          164 AYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT--------------------------EDPQKLKT  216 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT--------------------------CCGGGSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc--------------------------cchhccCC
Confidence            99999999999999999999987 9999999999999997654322                          11234568


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|+|++++||+++.++|+||++|.+|||+..+.
T Consensus       217 p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          217 PADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             TGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence            9999999999999999999999999999997653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4e-49  Score=346.46  Aligned_cols=265  Identities=27%  Similarity=0.397  Sum_probs=219.7

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------chhhHHHHHHhhcCCCceEEEeccCCC
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID------------DAAGIALADSLLSSSPLVTYLHCDVSL   75 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~s~   75 (285)
                      ..|.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.+.+.++.++++|++|
T Consensus        39 ~~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d  118 (317)
T 3oec_A           39 ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD  118 (317)
T ss_dssp             ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             chhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            34667999999999999999999999999999999999886            566677777776677889999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEc
Q 040531           76 EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTA  154 (285)
Q Consensus        76 ~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vs  154 (285)
                      .++++++++++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++|
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~is  194 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQ----GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVS  194 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence            999999999999999999999999998654    5678899999999999999999999999999998765 79999999


Q ss_pred             ccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH
Q 040531          155 SVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV  234 (285)
Q Consensus       155 s~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                      |..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........  +........ .+...+..
T Consensus       195 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~  271 (317)
T 3oec_A          195 STVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKM--FLPHLENPT-REDAAELF  271 (317)
T ss_dssp             CGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHH--HCTTCSSCC-HHHHHHHH
T ss_pred             cHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhh--hhhhccccc-hhHHHHHH
Confidence            999999999999999999999999999999999999999999999999998753210000  000000001 11122222


Q ss_pred             hhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          235 RGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       235 ~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .......+++.+|+|+|++++||+++.++|+||++|.||||++..
T Consensus       272 ~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          272 SQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             TTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            221112267789999999999999999999999999999999864

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-49  Score=334.53  Aligned_cols=246  Identities=30%  Similarity=0.402  Sum_probs=223.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.+.+.++.++++|++|.++++++++++.+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999999999888887778889999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++
T Consensus        81 ~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (247)
T 3lyl_A           81 LAIDILVNNAGITRD----NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCA  156 (247)
T ss_dssp             CCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHH
Confidence            999999999998654    5778899999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+++|+++++.|++++||+||+|+||+|+|++.....+             +   .......  ..+.+++.+|||+
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~---~~~~~~~--~~~~~~~~~~~dv  218 (247)
T 3lyl_A          157 AKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD-------------E---QKSFIAT--KIPSGQIGEPKDI  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH-------------H---HHHHHHT--TSTTCCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH-------------H---HHHHHhh--cCCCCCCcCHHHH
Confidence            99999999999999999999999999999999998754311             1   1111111  3567889999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++||+++.+.+++|++|.+|||+++
T Consensus       219 a~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          219 AAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            9999999999999999999999999976

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.4e-50  Score=342.07  Aligned_cols=250  Identities=26%  Similarity=0.348  Sum_probs=210.6

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC---chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID---DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .++++++|++|||||++|||+++|++|+++|++|++++|.   .+.++++.+++.+.+.++.++++|++|.+++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3568999999999999999999999999999999998764   4566677777777778899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|  ++.|+||++||..+..+.++.
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~~~~~~~~  158 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLK----KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFY  158 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCS----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHHHHHHCCC
T ss_pred             HHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhhccCCCCC
Confidence            99999999999999998754    678889999999999999999999999999999  346899999999998888889


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++.......               +.......  ..+.+++.
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---------------~~~~~~~~--~~~~~r~~  221 (262)
T 3ksu_A          159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK---------------ESTAFHKS--QAMGNQLT  221 (262)
T ss_dssp             CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------CCCCSC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch---------------HHHHHHHh--cCcccCCC
Confidence            99999999999999999999999999999999999999997643211               11111111  24678899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +|||+|++++||+++ +.|+||++|.+|||++....+
T Consensus       222 ~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~~~~~~  257 (262)
T 3ksu_A          222 KIEDIAPIIKFLTTD-GWWINGQTIFANGGYTTREGH  257 (262)
T ss_dssp             CGGGTHHHHHHHHTT-TTTCCSCEEEESTTCCCC---
T ss_pred             CHHHHHHHHHHHcCC-CCCccCCEEEECCCccCCCcc
Confidence            999999999999999 899999999999999987655

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-49  Score=339.26  Aligned_cols=249  Identities=26%  Similarity=0.366  Sum_probs=200.5

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |+|++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999998887776665   56789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC------CCceEEEEcccccccCC
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGG  162 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~ii~vss~~~~~~~  162 (285)
                      +++++|+||||||+........+..+.+.++|++.+++|+.+++.++++++|.|+++      +.|+||++||..+..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            999999999999987543222223467899999999999999999999999999874      57999999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc-
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK-  241 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (285)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......                .......  ..|. 
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------------~~~~~~~--~~p~~  219 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD----------------VQDALAA--SVPFP  219 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------------------C--CSSSS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH----------------HHHHHHh--cCCCC
Confidence            99999999999999999999999999999999999999999987543211                1111111  2355 


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +++.+|||+|++++||+++  +++||++|.+|||+++..
T Consensus       220 ~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~~~~~  256 (257)
T 3tpc_A          220 PRLGRAEEYAALVKHICEN--TMLNGEVIRLDGALRMAP  256 (257)
T ss_dssp             CSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC--
T ss_pred             CCCCCHHHHHHHHHHHccc--CCcCCcEEEECCCccCCC
Confidence            7889999999999999976  799999999999998753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-49  Score=337.22  Aligned_cols=255  Identities=28%  Similarity=0.403  Sum_probs=217.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888888877666778999999999999999999999999


Q ss_pred             c-CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           90 H-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      + +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|
T Consensus        96 ~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIH----KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLY  171 (273)
T ss_dssp             TTSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchh
Confidence            9 899999999998643    56788999999999999999999999999999987778999999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++.......        .+  ...+.......  ..|.+++.+|+
T Consensus       172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~--~~~~~~~~~~~--~~p~~r~~~p~  239 (273)
T 1ae1_A          172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKK--------NP--HQKEEIDNFIV--KTPMGRAGKPQ  239 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------CHHHHHHHHH--HSTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhc--------cc--CcHHHHHHHHh--cCCCCCCcCHH
Confidence            99999999999999999999999999999999999986543210        00  00111122222  24678899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++||+++.+++++|++|.+|||++..+
T Consensus       240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~  271 (273)
T 1ae1_A          240 EVSALIAFLCFPAASYITGQIIWADGGFTANG  271 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHHHHHHHhCccccCcCCCEEEECCCcccCC
Confidence            99999999999999999999999999998764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.8e-49  Score=337.27  Aligned_cols=243  Identities=29%  Similarity=0.426  Sum_probs=213.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++++|++|||||++|||+++|++|+++|++|++++++. +.+++..+++.+.+.++.++++|++|.++++++++++.++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999997654 6667777777777788999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-CCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-GLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-~~~~~~Y  168 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+ .++...|
T Consensus       107 ~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y  180 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHS----APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLY  180 (271)
T ss_dssp             HSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHH
T ss_pred             cCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHH
Confidence            9999999999998654    67889999999999999999999999999999953  689999999776654 6888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++.....              ...+   ....  ..+.+++.+||
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--------------~~~~---~~~~--~~~~~r~~~pe  241 (271)
T 3v2g_A          181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--------------DHAE---AQRE--RIATGSYGEPQ  241 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--------------SSHH---HHHH--TCTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--------------hhHH---HHHh--cCCCCCCCCHH
Confidence            999999999999999999999999999999999999864311              0111   1111  35778899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+++.++|+||++|.+|||++.
T Consensus       242 dvA~~v~fL~s~~~~~itG~~i~vdGG~~a  271 (271)
T 3v2g_A          242 DIAGLVAWLAGPQGKFVTGASLTIDGGANA  271 (271)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHhCcccCCccCCEEEeCcCccC
Confidence            999999999999999999999999999863

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-49  Score=338.78  Aligned_cols=243  Identities=26%  Similarity=0.342  Sum_probs=207.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++.+.+.++.++++|++|.++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999987 55666777777777777788999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+
T Consensus       103 ~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  176 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPL----TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYA  176 (267)
T ss_dssp             HSCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHH
Confidence            9999999999998644    67888999999999999999999999999999964  58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.......               +.......  ..|.+++.+|||
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------------~~~~~~~~--~~p~~r~~~ped  239 (267)
T 3u5t_A          177 AAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD---------------EVRDRFAK--LAPLERLGTPQD  239 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------------------CHHHHHT--SSTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH---------------HHHHHHHh--cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999986542111               11111111  357788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      +|++++||+++.+.|+||++|.+|||+
T Consensus       240 vA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          240 IAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             HHHHHHHHhCccccCccCCEEEeCCCc
Confidence            999999999999999999999999997

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=8.5e-49  Score=341.21  Aligned_cols=253  Identities=21%  Similarity=0.204  Sum_probs=215.8

Q ss_pred             ccccCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++++|++|++|||||+|  |||+++|++|+++|++|++++|+.+..+...+.. +..+.+.+++||++|.++++++++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLA-ESLGVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-HHHTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH-HhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence            35678999999999997  9999999999999999999999976544443333 22345789999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .++++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++..
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTT
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCch
Confidence            9999999999999998643111246788999999999999999999999999999964  79999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++.....              ...+.......  ..|.+++.+
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--------------~~~~~~~~~~~--~~p~~r~~~  244 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS--------------DFHYILTWNKY--NSPLRRNTT  244 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH--------------HHHHHHHHHHH--HSTTSSCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc--------------chHHHHHHHHh--cCCCCCCCC
Confidence            99999999999999999999999999999999999999865421              11122222222  357889999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |||+|++++||+++.++|+||++|.+|||+++.+
T Consensus       245 pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~  278 (296)
T 3k31_A          245 LDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVG  278 (296)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHHHHHHHHHcCCccCCccCCEEEECCCccccC
Confidence            9999999999999999999999999999998864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=9.2e-49  Score=340.50  Aligned_cols=255  Identities=22%  Similarity=0.222  Sum_probs=211.3

Q ss_pred             cccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .+|.++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.+..+++.++++|++|.+++++++++
T Consensus        24 ~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           24 AQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEELGAFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             ---CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCceEEECCCCCHHHHHHHHHH
Confidence            34557899999999999  5599999999999999999999985543 33344433345788999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.++++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++.
T Consensus       103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  180 (293)
T 3grk_A          103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNY  180 (293)
T ss_dssp             HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTT
T ss_pred             HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCch
Confidence            99999999999999998642111257788999999999999999999999999999964  7999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++......              ..+.......  ..+.+++.
T Consensus       181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~r~~  244 (293)
T 3grk_A          181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD--------------FRYILKWNEY--NAPLRRTV  244 (293)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC--------------HHHHHHHHHH--HSTTSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc--------------hHHHHHHHHh--cCCCCCCC
Confidence            9999999999999999999999999999999999999998654311              1111122222  35788999


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|+|+|++++||+++.++++||++|.+|||+++.+-
T Consensus       245 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          245 TIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             CHHHHHHHHHHHcCccccCCcceEEEECCCcccCCC
Confidence            999999999999999999999999999999998653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=8.2e-49  Score=335.19  Aligned_cols=252  Identities=32%  Similarity=0.429  Sum_probs=208.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|.++++++++++.++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999999999988887766   567999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC----CceEEEEcccccccCCCCC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR----SGCIISTASVASLMGGLGP  165 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~ii~vss~~~~~~~~~~  165 (285)
                      ++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++    .++||++||..+..+.++.
T Consensus        81 ~g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  157 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKP---QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL  157 (261)
T ss_dssp             HSCCCEEEECCCCCCCS---CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC
T ss_pred             cCCCCEEEECCccCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc
Confidence            99999999999986422   5677889999999999999999999999999997653    6789999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++|+++++.|++++||+||+|+||+++|++.......            ...+.......  ..+.+++.
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~  223 (261)
T 3n74_A          158 AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGE------------DSEEIRKKFRD--SIPMGRLL  223 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CTTSSCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhccc------------CcHHHHHHHhh--cCCcCCCc
Confidence            99999999999999999999999999999999999999997654321            01111111111  34678899


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|||+|++++||+++.+.++||++|.+|||++++..
T Consensus       224 ~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          224 KPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred             CHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCCC
Confidence            999999999999999999999999999999998764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=4.3e-48  Score=330.74  Aligned_cols=252  Identities=27%  Similarity=0.364  Sum_probs=221.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999998888888776666789999999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           91 -GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                       +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        85 ~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIY----KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG  160 (260)
T ss_dssp             TTCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHH
Confidence             899999999998643    567888999999999999999999999999999888889999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|++.++++++.|++++||+||+|+||+++|++.......           ....+.+.....  ..+.+++.+|+|
T Consensus       161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~d  227 (260)
T 2ae2_A          161 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD-----------PEQKENLNKLID--RCALRRMGEPKE  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS-----------HHHHHHHHHHHH--TSTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccC-----------hhhHHHHHHHHh--cCCCCCCCCHHH
Confidence            9999999999999999999999999999999999987643211           111121112222  246788899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.+++++|++|.+|||++.+
T Consensus       228 vA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          228 LAAMVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCcccc
Confidence            999999999999999999999999998753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-48  Score=334.19  Aligned_cols=261  Identities=33%  Similarity=0.556  Sum_probs=219.5

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      ...+.++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|.+++++++
T Consensus         4 ~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   83 (267)
T 1iy8_A            4 TSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   83 (267)
T ss_dssp             ------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence            344556799999999999999999999999999999999999998888877777554  567899999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +++.++++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (267)
T 1iy8_A           84 TATTERFGRIDGFFNNAGIEGKQ---NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG  160 (267)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCC---BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS
T ss_pred             HHHHHHcCCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCC
Confidence            99999999999999999985321   467788999999999999999999999999999877789999999999998889


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|+++|+|+++|+++++.|++++||+||+|+||+|+|++.........       + ....+.......  ..|.++
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-------~-~~~~~~~~~~~~--~~p~~r  230 (267)
T 1iy8_A          161 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD-------P-ENPRKAAEEFIQ--VNPSKR  230 (267)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHC-------T-TCHHHHHHHHHT--TCTTCS
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccC-------h-hhhhhHHHHHhc--cCCCCC
Confidence            999999999999999999999999999999999999999999764210000       0 001111112222  246788


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +.+|+|+|++++||+++.+++++|++|.+|||+++.
T Consensus       231 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          231 YGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            899999999999999999999999999999998753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.5e-48  Score=338.81  Aligned_cols=247  Identities=28%  Similarity=0.393  Sum_probs=216.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH-HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+... ...+.+.+.+.++.++++|++|.++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999887544 444455556778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.++...|+
T Consensus       123 ~g~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  197 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYS  197 (291)
T ss_dssp             HSSCCEEEECCCCCCCC---SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHH
T ss_pred             cCCCCEEEECCCCcCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHH
Confidence            99999999999986432   56788899999999999999999999999999953  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.......               +......  ...+.+++.+|||
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---------------~~~~~~~--~~~p~~r~~~p~d  260 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE---------------KKVSQFG--SNVPMQRPGQPYE  260 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH---------------HHHHHTT--TTSTTSSCBCGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH---------------HHHHHHH--ccCCCCCCcCHHH
Confidence            9999999999999999999999999999999999997643221               1111111  1357788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.++++||++|.+|||+++.
T Consensus       261 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          261 LAPAYVYLASSDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             THHHHHHHHSGGGTTCCSCEEEESSSCCCC
T ss_pred             HHHHHHHHhCCccCCCcCCEEEECCCcccC
Confidence            999999999999999999999999999864

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-48  Score=332.06  Aligned_cols=252  Identities=23%  Similarity=0.315  Sum_probs=218.2

Q ss_pred             ccccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531            5 TEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      +++....+.++|++|||||++|||+++|++|+++|++|++++ |+.+...+..+.+.+.+.++.++++|++|.+++++++
T Consensus         3 ~~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A            3 HHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             ----------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHH
Confidence            345566678999999999999999999999999999999988 6677777777777767788999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+
T Consensus        83 ~~~~~~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (256)
T 3ezl_A           83 DKVKAEVGEIDVLVNNAGITRD----VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF  158 (256)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS
T ss_pred             HHHHHhcCCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC
Confidence            9999999999999999998654    577889999999999999999999999999999988889999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...+                +.......  ..+.++
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~--~~~~~~  220 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP----------------DVLEKIVA--TIPVRR  220 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH----------------HHHHHHHH--HSTTSS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH----------------HHHHHHHh--cCCCCC
Confidence            999999999999999999999999999999999999999999765321                12222222  246788


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+|+|+|++++||+++++.+++|+.|.+|||+++
T Consensus       221 ~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          221 LGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            89999999999999999999999999999999986

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-48  Score=332.04  Aligned_cols=253  Identities=30%  Similarity=0.456  Sum_probs=218.5

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh-hcCCCceEEEeccCCCHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL-LSSSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      +..+..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ .+.+.++.++++|++|.++++++++
T Consensus        12 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           12 HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             -----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            344556789999999999999999999999999999999999998888777766 3345678999999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc-cccCCC
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA-SLMGGL  163 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~-~~~~~~  163 (285)
                      ++.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.. +..+.+
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  167 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRR----HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP  167 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS
T ss_pred             HHHHHcCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCC
Confidence            999999999999999998643    577889999999999999999999999999999888889999999998 888888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|+++|+|+++|+++++.|++++||+||+|+||+++|++.......              .+.......  ..+.++
T Consensus       168 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~p~~~  231 (267)
T 1vl8_A          168 NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--------------PEKLDYMLK--RIPLGR  231 (267)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--------------HHHHHHHHH--TCTTSS
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--------------hHHHHHHHh--hCCCCC
Confidence            8899999999999999999999999999999999999999986543210              111112222  246678


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+|+|+|++++||+++.+++++|+.|.+|||++.
T Consensus       232 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          232 TGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHcCccccCCcCCeEEECCCCCC
Confidence            89999999999999999999999999999999863

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-48  Score=333.57  Aligned_cols=260  Identities=27%  Similarity=0.428  Sum_probs=219.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            2 SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999888888888766678999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        82 ~g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGA---FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYG  158 (262)
T ss_dssp             HSCCCEEEECCCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHH
T ss_pred             hCCCCEEEECCCCCCC---CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHH
Confidence            9999999999997522   1567888999999999999999999999999999877789999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH-HHHHHHhhhhcccCCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE-KMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++................. ....+ .......  ..|.+++.+|+
T Consensus       159 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~p~~r~~~p~  235 (262)
T 1zem_A          159 TSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYF-STDPKVVAQQMIG--SVPMRRYGDIN  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTS-CSSHHHHHHHHHH--TSTTSSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhcccccc-ccCHHHHHHHHHh--cCCCCCCcCHH
Confidence            99999999999999999999999999999999999876421000000000000 00011 1111212  24778899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      |+|++++||+++.++|+||++|.+|||
T Consensus       236 dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          236 EIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999999999998

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.5e-48  Score=337.97  Aligned_cols=249  Identities=24%  Similarity=0.299  Sum_probs=215.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +++|++|++|||||++|||++++++|+++|++|++++|+.  +..++..+.+.+.+.++.++++|++|.++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999873  34555556666667789999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...
T Consensus       124 ~~~g~iD~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~  198 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAI---PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLD  198 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCC---SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHH
T ss_pred             HHcCCCCEEEECCCCcCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchH
Confidence            9999999999999986432   56788999999999999999999999999999954  589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.........              ......  ...+.+++.+|
T Consensus       199 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~--------------~~~~~~--~~~p~~r~~~p  262 (294)
T 3r3s_A          199 YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD--------------KIPQFG--QQTPMKRAGQP  262 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGG--------------GSTTTT--TTSTTSSCBCG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHH--------------HHHHHH--hcCCCCCCcCH
Confidence            99999999999999999999999999999999999998543211100              000000  13467889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++++||+++.++|+||++|.+|||++++
T Consensus       263 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l~  294 (294)
T 3r3s_A          263 AELAPVYVYLASQESSYVTAEVHGVCGGEHLG  294 (294)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCccCc
Confidence            99999999999999999999999999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=5.7e-48  Score=330.46  Aligned_cols=260  Identities=25%  Similarity=0.307  Sum_probs=221.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++++|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888877777544 56789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus        82 ~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSN----ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIY  157 (263)
T ss_dssp             HHSSCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchH
Confidence            99999999999998643    56788899999999999999999999999999987778999999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|++.++++++.|++++||+||+|+||+|+|++..........    .. .....+........ ..|.+++.+|+
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~-~~p~~~~~~~~  231 (263)
T 3ai3_A          158 NVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTK----DN-GGDWKGYLQSVADE-HAPIKRFASPE  231 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTT----TT-TCCHHHHHHHHHHH-HCTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhc----cc-CCcHHHHHHHHHhc-CCCCCCCcCHH
Confidence            99999999999999999999999999999999999987643221000    00 00011111222111 14678899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|++++||+++.+.+++|+.|.+|||++.+
T Consensus       232 dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          232 ELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            9999999999999999999999999998754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=3.1e-48  Score=333.25  Aligned_cols=254  Identities=35%  Similarity=0.492  Sum_probs=215.2

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      +....++++|++|||||++|||+++|++|+++|++|++++|+.+..          ...+..+++|++|.++++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHH
Confidence            4456679999999999999999999999999999999999987654          124678999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus        76 ~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  151 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQY----SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAA  151 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCC----CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCCh
Confidence            9999999999999998644    678889999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|+++ +|+||+|+||+|+|++..........     .......+....+..  ..+.+++.+
T Consensus       152 ~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~p~~r~~~  223 (269)
T 3vtz_A          152 AYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVG-----EDENAVERKIEEWGR--QHPMGRIGR  223 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHC-----CSTTHHHHHHHHHHH--HSTTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhcccc-----ccchhhHHHHHHHHh--cCCCCCCcC
Confidence            9999999999999999999998 89999999999999997654321000     000111222223222  357889999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |||+|++++||+++.+.++||++|.+|||++...+|
T Consensus       224 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  259 (269)
T 3vtz_A          224 PEEVAEVVAFLASDRSSFITGACLTVDGGLLSKLPI  259 (269)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCCC
T ss_pred             HHHHHHHHHHHhCCccCCCcCcEEEECCCccccCCC
Confidence            999999999999999999999999999999987655

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.7e-48  Score=336.97  Aligned_cols=259  Identities=26%  Similarity=0.347  Sum_probs=213.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+   +.++.++++|+++.++++++++++.+.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999999998887776654   5679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQS-KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||+..... ......+.+.++|++.+++|+.+++.++++++|.|+++ .|+||++||..+..+.++...|+
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  156 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYT  156 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHH
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhH
Confidence            99999999999864321 11222345567899999999999999999999999765 49999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++ |+||+|+||+|+|++...........   ..   ...+ ..+.... ..|.+|+.+|||
T Consensus       157 asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~---~~---~~~~-~~~~~~~-~~p~~r~~~ped  227 (281)
T 3zv4_A          157 ATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQ---SI---SSVP-LADMLKS-VLPIGRMPALEE  227 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------------CC-HHHHHHH-TCTTSSCCCGGG
T ss_pred             HHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccc---cc---cchh-HHHHHHh-cCCCCCCCCHHH
Confidence            99999999999999999987 99999999999999865322110000   00   0000 1111111 357899999999


Q ss_pred             HHHHHHHHhc-CCCCcccccEEEecCCccccccc
Q 040531          250 IAEAALYLAS-DESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       250 va~~~~~l~s-~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +|++++||++ +.+.|+||++|.+|||++..+.+
T Consensus       228 vA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          228 YTGAYVFFATRGDSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             GSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCSS
T ss_pred             HHHHHHHhhcccccccccCcEEEECCCCccccch
Confidence            9999999999 78899999999999999987654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.5e-48  Score=331.03  Aligned_cols=248  Identities=29%  Similarity=0.433  Sum_probs=214.9

Q ss_pred             ccccCCCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGA-RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas-~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++++|++|||||+ +|||++++++|+++|++|++++|+.+.+++..+++.+.. .++.++++|++|.++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            3456899999999997 599999999999999999999999999998888886544 67999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~  165 (285)
                      .++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..+.++.
T Consensus        96 ~~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  171 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQ----TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ  171 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC
T ss_pred             HHHhCCCcEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC
Confidence            9999999999999998644    678889999999999999999999999999999876 67899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++|+++++.|++++||+||+|+||+|+|++.+.....               +.......  ..+.+++.
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~r~~  234 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS---------------ELLDRLAS--DEAFGRAA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------CCTTSSCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH---------------HHHHHHHh--cCCcCCCC
Confidence            99999999999999999999999999999999999999987643221               11111111  34678889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|||+|++++||+++.+.++||++|.+|||++
T Consensus       235 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          235 EPWEVAATIAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEEcCCcC
Confidence            99999999999999999999999999999985

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=3.7e-48  Score=336.44  Aligned_cols=248  Identities=23%  Similarity=0.260  Sum_probs=214.6

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhh-cCCCceEEEeccCCCHH---------
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLL-SSSPLVTYLHCDVSLEQ---------   77 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~D~s~~~---------   77 (285)
                      .|++|++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++. +.+.++.++++|+++.+         
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            46689999999999999999999999999999999999 99988888888775 44668999999999999         


Q ss_pred             --------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCC--------------HHHHHHHHHhhhhhHHHHH
Q 040531           78 --------DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD--------------ANEFDNIIRINVRGAALGM  135 (285)
Q Consensus        78 --------~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~  135 (285)
                              +++++++++.+.++++|+||||||+...    .++.+.+              .++|++.+++|+.+++.++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  158 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP----TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  158 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCCCC-------------HHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC----CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHH
Confidence                    9999999999999999999999998643    4667777              8999999999999999999


Q ss_pred             HHHHHhhcCCC------CceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh
Q 040531          136 KYAAKVMVPRR------SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       136 ~~~~~~~~~~~------~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~  209 (285)
                      ++++|.|++++      .++||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++ .  
T Consensus       159 ~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--  235 (291)
T 1e7w_A          159 KAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--  235 (291)
T ss_dssp             HHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--
T ss_pred             HHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--
Confidence            99999998776      69999999999999999999999999999999999999999999999999999999998 4  


Q ss_pred             hcccccccCCCCCchHHHHHHHHHHhhhhcccC-CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          210 WKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG-VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      ...               +.......  ..|.+ +..+|||+|+.++||+++.++|+||++|.+|||+++.+
T Consensus       236 ~~~---------------~~~~~~~~--~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  290 (291)
T 1e7w_A          236 MPP---------------AVWEGHRS--KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  290 (291)
T ss_dssp             SCH---------------HHHHHHHT--TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCH---------------HHHHHHHh--hCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccccc
Confidence            211               11122222  23666 88999999999999999999999999999999998653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2e-48  Score=335.87  Aligned_cols=248  Identities=30%  Similarity=0.448  Sum_probs=209.9

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------chhhHHHHHHhhcCCCceEEEeccCC
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID------------DAAGIALADSLLSSSPLVTYLHCDVS   74 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~s   74 (285)
                      ...+.+|++|++|||||++|||++++++|+++|++|++++|+            .+.+++..+.+.+.+.++.++++|++
T Consensus         5 ~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   84 (278)
T 3sx2_A            5 RSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR   84 (278)
T ss_dssp             ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            445678999999999999999999999999999999999987            66666776666666788999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEE
Q 040531           75 LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIIST  153 (285)
Q Consensus        75 ~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~v  153 (285)
                      |.++++++++++.++++++|+||||||+...    .    .+.++|++.+++|+.+++.++++++|.|++++ .|+||++
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~----~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i  156 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPM----S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLI  156 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCC----S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC----C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999999999999999999999999998532    1    15899999999999999999999999998764 7999999


Q ss_pred             cccccccCC----CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          154 ASVASLMGG----LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       154 ss~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      ||..+..+.    ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......               +.
T Consensus       157 sS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---------------~~  221 (278)
T 3sx2_A          157 SSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTR---------------EW  221 (278)
T ss_dssp             CCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH---------------HH
T ss_pred             ccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHH---------------HH
Confidence            999988776    66778999999999999999999999999999999999999987542211               11


Q ss_pred             HHHHHh--------hhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          230 MEELVR--------GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       230 ~~~~~~--------~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ......        ....+ +++.+|||+|++++||+++.++|+||++|.+|||++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          222 LAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             HHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            111000        00123 5778999999999999999999999999999999975

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=8.2e-48  Score=331.99  Aligned_cols=262  Identities=26%  Similarity=0.378  Sum_probs=223.1

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ....|++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.+++++++++
T Consensus        13 ~~~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   92 (277)
T 2rhc_B           13 RGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA   92 (277)
T ss_dssp             TTTTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            34455579999999999999999999999999999999999999988888888766667899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh--hcCCCCceEEEEcccccccCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV--MVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.  |++++.++||++||..+..+.+
T Consensus        93 ~~~~~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  168 (277)
T 2rhc_B           93 VVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV  168 (277)
T ss_dssp             HHHHTCSCSEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT
T ss_pred             HHHHhCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC
Confidence            99999999999999998643    56788899999999999999999999999999  8777779999999999988888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|+++|+|+++|+++++.|++++||+||+|+||+++|++...........+.     ....+.......  ..|.++
T Consensus       169 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~p~~r  241 (277)
T 2rhc_B          169 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWE-----VSTEEAFDRITA--RVPIGR  241 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHT-----CCHHHHHHHHHH--HSTTSS
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccc-----cchHHHHHHHHh--cCCCCC
Confidence            9999999999999999999999999999999999999999987543210000000     000111112211  246788


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.+|+|+|++++||+++.+++++|++|.+|||++.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            99999999999999999999999999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.9e-48  Score=328.39  Aligned_cols=244  Identities=35%  Similarity=0.522  Sum_probs=216.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +|++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.+.++.++++|++|.++++++++++.+.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999999 7777777777776666789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        81 g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (246)
T 2uvd_A           81 GQVDILVNNAGVTKD----NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVA  156 (246)
T ss_dssp             SCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHH
Confidence            999999999998643    5677889999999999999999999999999998777899999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++++++++.|++++||+||+|+||+++|++.....             ....+   ....  ..|.+++.+|+|+
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~~~~~---~~~~--~~p~~~~~~~~dv  218 (246)
T 2uvd_A          157 AKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD-------------ENIKA---EMLK--LIPAAQFGEAQDI  218 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC-------------TTHHH---HHHH--TCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC-------------HHHHH---HHHh--cCCCCCCcCHHHH
Confidence            9999999999999999999999999999999999854311             01111   1111  2466788999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+.++||+++.+++++|++|.+|||++
T Consensus       219 A~~~~~l~s~~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          219 ANAVTFFASDQSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHcCchhcCCCCCEEEECcCcc
Confidence            999999999999999999999999986

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.4e-48  Score=332.07  Aligned_cols=251  Identities=27%  Similarity=0.335  Sum_probs=218.6

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ...+|+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ ++.++++|++|.++++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHH
Confidence            344667999999999999999999999999999999999999988888887775443 7889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC----ceEEEEcccccccCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS----GCIISTASVASLMGG  162 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~ii~vss~~~~~~~  162 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.    ++||++||..+..+.
T Consensus       100 ~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~  175 (276)
T 2b4q_A          100 GELSARLDILVNNAGTSWG----AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM  175 (276)
T ss_dssp             HHHCSCCSEEEECCCCCCC----CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred             HHhcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence            9999999999999998643    56788899999999999999999999999999976655    899999999998888


Q ss_pred             CCCc-cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          163 LGPH-AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       163 ~~~~-~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      ++.. .|++||+|++.|+++++.|++++||+||+|+||+++|++.......                ...........|.
T Consensus       176 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------------~~~~~~~~~~~p~  239 (276)
T 2b4q_A          176 GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----------------PQALEADSASIPM  239 (276)
T ss_dssp             CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----------------HHHHHHHHHTSTT
T ss_pred             CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----------------HHHHHHhhcCCCC
Confidence            8888 9999999999999999999999999999999999999986543210                0011111002467


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++.+|+|+|++++||+++.+++++|++|.+|||+++
T Consensus       240 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          240 GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            8889999999999999999999999999999999863

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.9e-48  Score=333.75  Aligned_cols=249  Identities=29%  Similarity=0.400  Sum_probs=215.0

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ...|++++|++|||||++|||+++|++|+++|++|++++|+ .+..+...+.+.+.+.++.++++|++|.++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999995 44555566666666788999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++..
T Consensus       102 ~~~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  177 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRD----KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQT  177 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred             HHhcCCCCEEEECCCcCCC----cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCch
Confidence            9999999999999998754    567788999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|++.++++++.|++++||+||+|+||+|+|++.+.....                ......  ...+.+++.+
T Consensus       178 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----------------~~~~~~--~~~~~~~~~~  239 (271)
T 4iin_A          178 NYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----------------LKADYV--KNIPLNRLGS  239 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------------CG--GGCTTCSCBC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----------------HHHHHH--hcCCcCCCcC
Confidence            9999999999999999999999999999999999999987643211                111111  1346788899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+|++++||+++.+.+++|++|.+|||+++
T Consensus       240 p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          240 AKEVAEAVAFLLSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHHhCCCcCCCcCCEEEeCCCeeC
Confidence            99999999999999999999999999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-48  Score=338.04  Aligned_cols=240  Identities=23%  Similarity=0.276  Sum_probs=215.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-------hhHHHHHHhhcCCCceEEEeccCCCHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-------AGIALADSLLSSSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-------~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~   81 (285)
                      +.|+|++|++|||||++|||++++++|+++|++|++++|+.+       .+++..+++.+.+.++.++++|++|.+++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            456799999999999999999999999999999999999977       4566666666667789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC
Q 040531           82 LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG  161 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~  161 (285)
                      +++++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  158 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINL----GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP  158 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCC----CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC
Confidence            999999999999999999998744    6788899999999999999999999999999999888899999999988877


Q ss_pred             C-CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCC-CccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          162 G-LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPF-GVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       162 ~-~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      . ++...|++||+|+++|+++++.|++++||+||+|+|| .+.|++.......                         ..
T Consensus       159 ~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~-------------------------~~  213 (285)
T 3sc4_A          159 KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG-------------------------DE  213 (285)
T ss_dssp             GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS-------------------------CC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc-------------------------cc
Confidence            5 7789999999999999999999999999999999999 7999987654322                         23


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.++..+|||+|++++||+++.+ ++||+.+.+|||+..
T Consensus       214 ~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~dgg~~~  251 (285)
T 3sc4_A          214 AMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCEDVLLE  251 (285)
T ss_dssp             CCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHhCCcc-cccceEEEEcCchhc
Confidence            56778899999999999999998 999999999999865

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-48  Score=338.09  Aligned_cols=261  Identities=24%  Similarity=0.330  Sum_probs=213.7

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------chhhHHHHHHhhcCCCceEEEeccCCC
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID------------DAAGIALADSLLSSSPLVTYLHCDVSL   75 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~s~   75 (285)
                      .+|+++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++....+...+.++.++++|++|
T Consensus         3 ~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (287)
T 3pxx_A            3 GSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD   82 (287)
T ss_dssp             TSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred             CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence            34678999999999999999999999999999999999987            666677777776667889999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           76 EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        76 ~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                      .++++++++++.++++++|+||||||+...    .  .+.+.++|++.+++|+.+++.++++++|.|  ++.++||++||
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~----~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS  154 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPL----G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC----C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcc----c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEecc
Confidence            999999999999999999999999998643    2  237889999999999999999999999999  45689999999


Q ss_pred             cccccCC-----------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCch
Q 040531          156 VASLMGG-----------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCE  224 (285)
Q Consensus       156 ~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  224 (285)
                      ..+..+.           ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........  ........
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~  232 (287)
T 3pxx_A          155 VAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQ--FRPDLEAP  232 (287)
T ss_dssp             HHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHH--HCTTSSSC
T ss_pred             chhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhh--hccccccc
Confidence            8887654           5667899999999999999999999999999999999999999764211000  00000001


Q ss_pred             HHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          225 EEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ...+...........+ +++.+|||+|++++||+|+.++|+||++|.||||+++.
T Consensus       233 ~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          233 SRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             CHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            1111111111111223 77899999999999999999999999999999999863

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=5.9e-48  Score=327.88  Aligned_cols=245  Identities=31%  Similarity=0.420  Sum_probs=206.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +++|++|++|||||++|||++++++|+++|++|++++|+. +.+++   .+.+.+.++.++++|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999998 66554   2333356789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus        79 ~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  154 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPL----IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHY  154 (249)
T ss_dssp             HHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhH
Confidence            99999999999998643    56788999999999999999999999999999987778999999999999988999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh-hhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV-NAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ++||+|++.++++++.|++++||+||+|+||+|+|++.. .....             ..    +....+..+.+++.+|
T Consensus       155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------------~~----~~~~~~~~~~~~~~~p  217 (249)
T 2ew8_A          155 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-------------MF----DVLPNMLQAIPRLQVP  217 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------------------CTTSSSCSCCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-------------hh----hHHHHhhCccCCCCCH
Confidence            999999999999999999999999999999999999865 21100             00    0011111366788999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|++++||+++.+++++|++|.+|||++.
T Consensus       218 ~dva~~~~~l~s~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          218 LDLTGAAAFLASDDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHHHHHHHcCcccCCCCCcEEEECCCccC
Confidence            9999999999999999999999999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.6e-47  Score=328.22  Aligned_cols=256  Identities=20%  Similarity=0.215  Sum_probs=218.9

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC-ceEEEeccCCCHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP-LVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      |++++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+...+...+.+. ++.++++|++|.+++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            3568999999999999  6799999999999999999999987654444444433333 799999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|+  +.|+||++||..+..+.++.
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~  158 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT--EGGSIVTLTYLGGELVMPNY  158 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT--TCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCceEEEEecccccccCCCc
Confidence            9999999999999999875322236778899999999999999999999999999995  36999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++......              ..+.......  ..+.++..
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~~~~~~~  222 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD--------------FNSILKDIEE--RAPLRRTT  222 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT--------------HHHHHHHHHH--HSTTSSCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc--------------hHHHHHHHHh--cCCCCCCC
Confidence            9999999999999999999999999999999999999998764321              1122222222  24678889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +|+|+|++++||+++.+.+++|+.|.+|||++....+
T Consensus       223 ~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          223 TPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             CHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeec
Confidence            9999999999999999999999999999999986543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.2e-47  Score=327.86  Aligned_cols=251  Identities=31%  Similarity=0.420  Sum_probs=220.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            44689999999999999999999999999999999999998888888777666778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        89 ~g~iD~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  165 (260)
T 2zat_A           89 HGGVDILVSNAAVNPF---FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYN  165 (260)
T ss_dssp             HSCCCEEEECCCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             cCCCCEEEECCCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHH
Confidence            9999999999997532   1467788999999999999999999999999999888889999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|++.|+++++.|++++||+||+|+||+++|++....+..           ....+   ....  ..+.+++.+|+|
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~---~~~~--~~~~~~~~~~~d  229 (260)
T 2zat_A          166 VSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD-----------KARKE---YMKE--SLRIRRLGNPED  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS-----------HHHHH---HHHH--HHTCSSCBCGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC-----------hHHHH---HHHh--cCCCCCCCCHHH
Confidence            9999999999999999999999999999999999986543211           11111   1111  236678899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.++|++|++|.+|||+..+
T Consensus       230 va~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          230 CAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             GHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            999999999999999999999999998764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.6e-48  Score=333.20  Aligned_cols=246  Identities=31%  Similarity=0.422  Sum_probs=211.2

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..|+++++|++|||||++|||+++|++|+++|++|++++|+.+.+.           ....+++|+++.++++++++++.
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHH
Confidence            3466899999999999999999999999999999999999876532           12446899999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus        90 ~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  165 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISR----GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHAL  165 (266)
T ss_dssp             HHHSCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHH
T ss_pred             HhcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChH
Confidence            999999999999998754    5778899999999999999999999999999998888999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.+.......         ....+.......  ..+.+++.+|
T Consensus       166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~~~~~--~~p~~r~~~p  234 (266)
T 3uxy_A          166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRG---------FDPDRAVAELGR--TVPLGRIAEP  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTT---------CCHHHHHHHHHT--TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhccc---------ccchHHHHHHHh--cCCCCCCcCH
Confidence            99999999999999999999999999999999999999875433200         011122222222  3577889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ||+|++++||+++.++|+||++|.+|||++++
T Consensus       235 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          235 EDIADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            99999999999999999999999999999763

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.6e-47  Score=326.84  Aligned_cols=253  Identities=28%  Similarity=0.393  Sum_probs=216.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh--hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA--GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  +++..+++.+.+.++.++++|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999887  77777777666678999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-ceEEEEcccccccCCCCCccchhh
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      +|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++. ++||++||..+..+.++...|++|
T Consensus        82 iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (258)
T 3a28_C           82 FDVLVNNAGIAQI----KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTT  157 (258)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHH
Confidence            9999999998643    57788999999999999999999999999999987666 999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+++++.|++++||+||+|+||+|+|++.............  .   ...+.......  ..|.+++.+|+|+|
T Consensus       158 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~--~---~~~~~~~~~~~--~~p~~r~~~p~dvA  230 (258)
T 3a28_C          158 KFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKING--K---PIGENFKEYSS--SIALGRPSVPEDVA  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHC--C---CTTHHHHHHHT--TCTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccC--C---chHHHHHHHHh--cCCCCCccCHHHHH
Confidence            99999999999999999999999999999999987642210000000  0   00011112211  24678899999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+++.+++++|+.|.+|||+++
T Consensus       231 ~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          231 GLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHHHHhCcccCCCCCCEEEECCCEec
Confidence            999999999999999999999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=8.8e-48  Score=328.80  Aligned_cols=255  Identities=31%  Similarity=0.456  Sum_probs=211.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-hHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-GIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++|++|||||++|||++++++|+++|++|++++|+.+. +++..+++.+. +.++.++++|++|.++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999999999887 77777776543 5678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        82 g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  157 (260)
T 1x1t_A           82 GRIDILVNNAGIQHT----ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             SCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHH
Confidence            999999999998643    5678889999999999999999999999999998777899999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH-HhhhhcccCCCCCHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL-VRGLANLKGVTLKARD  249 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ee  249 (285)
                      ||+|+++|+++++.|++++||+||+|+||+|+|++..........     .......+..... ..  ..|.+++.+|+|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~p~~~~~~p~d  230 (260)
T 1x1t_A          158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE-----KNGVDQETAARELLSE--KQPSLQFVTPEQ  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHH--HCTTCCCBCHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhcc-----ccCCchHHHHHHHhhc--cCCCCCCcCHHH
Confidence            999999999999999999999999999999999986543211000     0000001111111 11  246788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+++.+++++|++|.+|||++.
T Consensus       231 va~~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          231 LGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhChhhcCCCCCEEEECCCccC
Confidence            99999999999999999999999999875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.1e-48  Score=331.40  Aligned_cols=251  Identities=25%  Similarity=0.342  Sum_probs=215.4

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++...+++|++|||||++|||++++++|+++|++|++++ ++.+..++..+.+.+.+.++.++++|++|.++++++++++
T Consensus        18 ~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           18 GPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            334447899999999999999999999999999999998 5555666666666666778999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus        98 ~~~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  173 (269)
T 3gk3_A           98 LADFGKVDVLINNAGITRD----ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQA  173 (269)
T ss_dssp             HHHHSCCSEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBH
T ss_pred             HHHcCCCCEEEECCCcCCC----cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcc
Confidence            9999999999999998754    567888999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.....                ...... ....+.+++.+
T Consensus       174 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----------------~~~~~~-~~~~~~~~~~~  236 (269)
T 3gk3_A          174 NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD----------------VLEAKI-LPQIPVGRLGR  236 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------------------CCS-GGGCTTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh----------------HHHHHh-hhcCCcCCccC
Confidence            9999999999999999999999999999999999999997643221                000000 11246678889


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|+|++++||+++.+.++||++|.+|||++++
T Consensus       237 p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          237 PDEVAALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            999999999999999999999999999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-47  Score=332.64  Aligned_cols=261  Identities=26%  Similarity=0.350  Sum_probs=218.5

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC---ceEEEeccCCCHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP---LVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~s~~~~i~~~   82 (285)
                      ....||++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.   ++.++++|++|.++++++
T Consensus        17 ~~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~   96 (297)
T 1xhl_A           17 RGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI   96 (297)
T ss_dssp             ------CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHH
Confidence            44556789999999999999999999999999999999999999988888887766555   789999999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCC--CCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKS--ITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM  160 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~  160 (285)
                      ++++.+.++++|+||||||+...    .+  +.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~  171 (297)
T 1xhl_A           97 INTTLAKFGKIDILVNNAGANLA----DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP  171 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC----CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS
T ss_pred             HHHHHHhcCCCCEEEECCCcCcC----CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc
Confidence            99999999999999999998643    34  77889999999999999999999999999998766 9999999999888


Q ss_pred             CC-CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          161 GG-LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       161 ~~-~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      +. ++...|+++|+|+++|+++++.|++++||+||+|+||+|+|++.........       ......+.......  ..
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~  242 (297)
T 1xhl_A          172 QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPET-------ASDKLYSFIGSRKE--CI  242 (297)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHH-------HHHHHHHHHHHCTT--TC
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccc-------cccchHHHHHHHHh--cC
Confidence            87 8889999999999999999999999999999999999999998764310000       00000111111111  23


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCC-CCcccccEEEecCCccccc
Q 040531          240 LKGVTLKARDIAEAALYLASDE-SKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~~~~~  280 (285)
                      |.+++.+|+|+|++++||+++. +++++|+.|.+|||++...
T Consensus       243 p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~  284 (297)
T 1xhl_A          243 PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVM  284 (297)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccc
Confidence            6678899999999999999998 8999999999999998653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-47  Score=322.35  Aligned_cols=241  Identities=34%  Similarity=0.503  Sum_probs=212.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     .+.++++|++|.++++++++++.+++
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999988877665544     27889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.. ..+.++...|++
T Consensus        76 g~id~lvn~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~a  150 (245)
T 1uls_A           76 GRLDGVVHYAGITRD----NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAA  150 (245)
T ss_dssp             SSCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHH
Confidence            999999999998643    567888999999999999999999999999999888889999999998 888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++|+++++.|++++||+||+|+||+++|++.... .            .   +.......  ..+.++..+|+|+
T Consensus       151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~------------~---~~~~~~~~--~~p~~~~~~~~dv  212 (245)
T 1uls_A          151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-P------------E---KVREKAIA--ATPLGRAGKPLEV  212 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-C------------H---HHHHHHHH--TCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-C------------H---HHHHHHHh--hCCCCCCcCHHHH
Confidence            999999999999999999999999999999999986431 0            1   11112222  2466788999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+.++||+++.+.+++|+.|.+|||++..
T Consensus       213 A~~v~~l~s~~~~~~tG~~~~vdgG~~~~  241 (245)
T 1uls_A          213 AYAALFLLSDESSFITGQVLFVDGGRTIG  241 (245)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHHHHhCchhcCCcCCEEEECCCcccC
Confidence            99999999999999999999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.5e-48  Score=334.76  Aligned_cols=239  Identities=25%  Similarity=0.300  Sum_probs=208.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-------hHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-------GIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      ++|++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+.+.+.+.++.++++|++|.+++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            67899999999999999999999999999999999998764       55566666556788999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--  161 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--  161 (285)
                      +++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+  
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  157 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWL----RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW  157 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC----CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccC----CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence            9999999999999999998644    5778899999999999999999999999999999888999999999988876  


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCC-CccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPF-GVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      .++...|++||+|+++|+++++.|++++||+||+|+|| .++|++.... ..                          .+
T Consensus       158 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~-~~--------------------------~~  210 (274)
T 3e03_A          158 WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML-PG--------------------------VD  210 (274)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------C--------------------------CC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc-cc--------------------------cc
Confidence            56778999999999999999999999999999999999 6999986321 10                          12


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      ..+..+|||+|++++||+++.++++||++| +|||+....+
T Consensus       211 ~~~~~~pedvA~~v~~l~s~~~~~itG~~i-~~~g~~~~~~  250 (274)
T 3e03_A          211 AAACRRPEIMADAAHAVLTREAAGFHGQFL-IDDEVLAQAG  250 (274)
T ss_dssp             GGGSBCTHHHHHHHHHHHTSCCTTCCSCEE-EHHHHHHHTT
T ss_pred             ccccCCHHHHHHHHHHHhCccccccCCeEE-EcCcchhhcc
Confidence            234669999999999999999999999999 8888765433

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3e-47  Score=324.74  Aligned_cols=253  Identities=31%  Similarity=0.439  Sum_probs=216.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999999988888887766667899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      +||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|++||+
T Consensus        82 ~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  157 (256)
T 1geg_A           82 VIVNNAGVAPS----TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKF  157 (256)
T ss_dssp             EEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             EEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHH
Confidence            99999998643    5678889999999999999999999999999998766 799999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      |+++++++++.|++++||+||+|+||+|+|++.............  ..   ..+.......  ..|.+++.+|+|+|++
T Consensus       158 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~---~~~~~~~~~~--~~p~~r~~~p~dvA~~  230 (256)
T 1geg_A          158 AVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAG--KP---LGYGTAEFAK--RITLGRLSEPEDVAAC  230 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHT--CC---TTHHHHHHHT--TCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhcccccc--CC---hHHHHHHHHh--cCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999986543110000000  00   0011111211  2467889999999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccc
Q 040531          254 ALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++||+++.+.|++|++|.+|||+++
T Consensus       231 v~~l~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          231 VSYLASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHhCccccCCCCCEEEeCCCccC
Confidence            9999999999999999999999864

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3e-47  Score=328.97  Aligned_cols=254  Identities=18%  Similarity=0.202  Sum_probs=216.2

Q ss_pred             cccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ..|.++++|++|||||+  +|||+++|++|+++|++|++++|+.  ..+..+++.+...++.++++|+++.+++++++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH
Confidence            34567899999999998  7899999999999999999999987  3444555544456689999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITD-FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG  164 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~  164 (285)
                      +.+.++++|+||||||+........++.+ .+.++|++.+++|+.+++.++++++|.|+++ .++||++||..+..+.++
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  175 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPS  175 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTT
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCC
Confidence            99999999999999998653222234555 8999999999999999999999999999765 799999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|++||+|++.|+++++.|++++||+||+|+||+|+|++......              ..+.......  ..+.++.
T Consensus       176 ~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~~~  239 (280)
T 3nrc_A          176 YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN--------------FKKMLDYNAM--VSPLKKN  239 (280)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT--------------HHHHHHHHHH--HSTTCSC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc--------------hHHHHHHHHh--cCCCCCC
Confidence            99999999999999999999999999999999999999998765321              1122222222  3567889


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      .+|||+|++++||+++.+.+++|++|.+|||++...
T Consensus       240 ~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          240 VDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             CCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCHHHHHHHHHHHhCcccCCcCCcEEEECCCccccC
Confidence            999999999999999999999999999999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.3e-48  Score=327.87  Aligned_cols=249  Identities=29%  Similarity=0.437  Sum_probs=187.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999888877888999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+.... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+.   ++...|+
T Consensus        84 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGM-KLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HSCCCEEEECCCCCCGG-GGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCC-CCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            99999999999985321 2246778899999999999999999999999999988889999999998876   4557899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++|+++++.|++++||+||+|+||+|+|++.+...+.               +.......  ..+.++..+|+|
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~d  222 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK---------------EMVDDIVK--GLPLSRMGTPDD  222 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------------CCH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH---------------HHHHHHhc--cCCCCCCCCHHH
Confidence            9999999999999999999999999999999999987543211               11111222  235677889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+++.+.+++|++|.+|||+.++
T Consensus       223 va~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          223 LVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            999999999999999999999999999764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-48  Score=335.26  Aligned_cols=251  Identities=22%  Similarity=0.281  Sum_probs=219.8

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~   81 (285)
                      +.++++|++|++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++.+.  +.++.++++|++|.+++++
T Consensus        25 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~  104 (287)
T 3rku_A           25 RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKP  104 (287)
T ss_dssp             HHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHH
T ss_pred             ccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence            3456779999999999999999999999999998   9999999999999888888653  5679999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC
Q 040531           82 LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG  161 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~  161 (285)
                      +++++.+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+
T Consensus       105 ~~~~~~~~~g~iD~lVnnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~  181 (287)
T 3rku_A          105 FIENLPQEFKDIDILVNNAGKALGS---DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA  181 (287)
T ss_dssp             HHHTSCGGGCSCCEEEECCCCCCCC---CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC
Confidence            9999999999999999999986422   5788899999999999999999999999999998888899999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....+..             ..+.......     .
T Consensus       182 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-------------~~~~~~~~~~-----~  243 (287)
T 3rku_A          182 YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-------------NEEQAKNVYK-----D  243 (287)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT-------------CHHHHHHHHT-----T
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC-------------cHHHHHHhhc-----c
Confidence            999999999999999999999999999999999999999999986543221             0111111111     1


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ....+|||+|++++||+++.+.+++|+++.+|||...
T Consensus       244 ~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          244 TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence            2234899999999999999999999999999999865

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-47  Score=326.32  Aligned_cols=257  Identities=17%  Similarity=0.186  Sum_probs=212.1

Q ss_pred             cccccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      +.....++++|++|||||+  +|||++++++|+++|++|++++|+... .+..+++.+..+++.++++|++|.+++++++
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence            3445668899999999999  999999999999999999999998544 4444455444556899999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITD-FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG  162 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~  162 (285)
                      +++.++++++|+||||||+........++.+ .+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~  161 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAI  161 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCC
Confidence            9999999999999999998653211134445 899999999999999999999999999963  6899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......              ..+.......  ..+.+
T Consensus       162 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~~~~  225 (271)
T 3ek2_A          162 PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS--------------FGKILDFVES--NSPLK  225 (271)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH--------------HHHHHHHHHH--HSTTS
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc--------------hHHHHHHHHh--cCCcC
Confidence            9999999999999999999999999999999999999999998654321              1122222222  35678


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      ++.+|||+|++++||+++.+.++||++|.+|||++.+.+
T Consensus       226 ~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~  264 (271)
T 3ek2_A          226 RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVG  264 (271)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCC
T ss_pred             CCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehh
Confidence            899999999999999999999999999999999998754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-47  Score=322.89  Aligned_cols=253  Identities=30%  Similarity=0.430  Sum_probs=214.0

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |++|++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++.    + .++++|++|.++++++++++.+.
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999877 66665552    4 78999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        75 ~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  150 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAP----GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYN  150 (256)
T ss_dssp             HSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHH
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHH
Confidence            9999999999998643    567788999999999999999999999999999888889999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.........         . ..+.......  ..+.+++.+|+|
T Consensus       151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---------~-~~~~~~~~~~--~~~~~~~~~~~d  218 (256)
T 2d1y_A          151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP---------D-PERTRRDWED--LHALRRLGKPEE  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------------CHHHHT--TSTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhcccccc---------C-CHHHHHHHHh--cCCCCCCcCHHH
Confidence            999999999999999999999999999999999998654311000         0 0011111111  246678899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNCVG  284 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~~  284 (285)
                      +|++++||+++.+.+++|+.|.+|||++.+-.+.|
T Consensus       219 vA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~~~~~  253 (256)
T 2d1y_A          219 VAEAVLFLASEKASFITGAILPVDGGMTASFMMAG  253 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGBC----
T ss_pred             HHHHHHHHhCchhcCCCCCEEEECCCccccccccC
Confidence            99999999999999999999999999987655544

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.8e-47  Score=324.87  Aligned_cols=242  Identities=19%  Similarity=0.234  Sum_probs=199.7

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +...+|+|++|++|||||++|||+++|++|+++|++|++++|+.+.+.+.....     .+.++++|++|.+++++++++
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~   92 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDL   92 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHH
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHH
Confidence            345567899999999999999999999999999999999999988765544433     278899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|+||||||+...    .+ .+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus        93 ~~~~~g~iD~lv~nAg~~~~----~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  167 (260)
T 3gem_A           93 LKTQTSSLRAVVHNASEWLA----ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH  167 (260)
T ss_dssp             HHHHCSCCSEEEECCCCCCC----CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC
T ss_pred             HHHhcCCCCEEEECCCccCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc
Confidence            99999999999999998644    22 46688999999999999999999999999998888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|+++ +|+||+|+||+|.|++....                  +.......  ..+.++..
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~------------------~~~~~~~~--~~p~~r~~  226 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDA------------------AYRANALA--KSALGIEP  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-----------------------------------CCSCCCC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCH------------------HHHHHHHh--cCCCCCCC
Confidence            99999999999999999999998 69999999999999874311                  01111111  24778889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|||+|++++||+  .+.++||++|.+|||+++..
T Consensus       227 ~~edva~~v~~L~--~~~~itG~~i~vdGG~~~~~  259 (260)
T 3gem_A          227 GAEVIYQSLRYLL--DSTYVTGTTLTVNGGRHVKG  259 (260)
T ss_dssp             CTHHHHHHHHHHH--HCSSCCSCEEEESTTTTTC-
T ss_pred             CHHHHHHHHHHHh--hCCCCCCCEEEECCCcccCC
Confidence            9999999999999  57899999999999998763

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-47  Score=326.87  Aligned_cols=259  Identities=27%  Similarity=0.355  Sum_probs=217.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC---ceEEEeccCCCHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP---LVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.   ++.++++|++|.++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888887765554   78999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-CCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-LGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-~~~~  166 (285)
                      +.++++|+||||||+....+....+.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+. ++..
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  160 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL  160 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCccc
Confidence            99999999999999864421111277889999999999999999999999999997655 999999999988887 8889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++.........       ......+.......  ..|.+++.+
T Consensus       161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~p~~~~~~  231 (280)
T 1xkq_A          161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQ-------ASQKFYNFMASHKE--CIPIGAAGK  231 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHH-------HHHHHHHHHHHCTT--TCTTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccc-------cccchHHHHHHHHc--CCCCCCCCC
Confidence            999999999999999999999999999999999999998764310000       00000111111111  246678899


Q ss_pred             HHHHHHHHHHHhcCC-CCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDE-SKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~~~~  279 (285)
                      |||+|++++||+++. +.+++|+.|.+|||++..
T Consensus       232 pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          232 PEHIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence            999999999999988 899999999999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.4e-46  Score=320.44  Aligned_cols=254  Identities=28%  Similarity=0.402  Sum_probs=214.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++.+.+.++.++++|++|.++++++++++.+.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999876  445556655566789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++
T Consensus        79 ~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (255)
T 2q2v_A           79 GVDILVNNAGIQHV----APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAA  154 (255)
T ss_dssp             SCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHH
Confidence            99999999998643    56778899999999999999999999999999988878999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++++++++.|++++||+||+|+||+|+|++...........     . ....+....... ...+.+++.+|+|+|
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-----~-~~~~~~~~~~~~-~~~p~~~~~~~~dvA  227 (255)
T 2q2v_A          155 KHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAAN-----G-GDPLQAQHDLLA-EKQPSLAFVTPEHLG  227 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHH-----T-CCHHHHHHHHHT-TTCTTCCCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccccccc-----c-cchHHHHHHHHh-ccCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999865421100000     0 000000111101 124677889999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+++.+++++|+.|.+|||++.
T Consensus       228 ~~~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          228 ELVLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCCccCCCCCCEEEECCCccC
Confidence            999999999999999999999999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.9e-47  Score=326.78  Aligned_cols=255  Identities=24%  Similarity=0.314  Sum_probs=213.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999998888877776532  33789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++ +|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus        83 ~~g-id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRP----GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALS  157 (260)
T ss_dssp             TTC-CSEEEECCCCCCC----BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             hcC-CCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchh
Confidence            998 9999999997543    56788899999999999999999999999999987778999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH-HHHHHhhhhcccCCCCCH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK-MEELVRGLANLKGVTLKA  247 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  247 (285)
                      +++|+|++++++.++.|++++||+||+|+||+|+|++...........  ...    ..+. ......  ..|.+++.+|
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~----~~~~~~~~~~~--~~p~~r~~~~  229 (260)
T 2z1n_A          158 NIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARR--SGI----TVEEALKSMAS--RIPMGRVGKP  229 (260)
T ss_dssp             HHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-------------------------------CCTTSSCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcc--cCC----cHHHHHHHHHh--cCCCCCccCH
Confidence            999999999999999999999999999999999999865221110000  000    0000 111111  2466888999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+.++||+++.+++++|++|.+|||+++
T Consensus       230 ~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          230 EELASVVAFLASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            9999999999999999999999999999863

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.6e-47  Score=325.57  Aligned_cols=253  Identities=23%  Similarity=0.342  Sum_probs=208.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH-HHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL-ADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+++.+|++|||||++|||++++++|+++|++|++++|+.+...+. .+.+.+.+.++.++++|++|.++++++++++.+
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3566789999999999999999999999999999998776654444 344444456799999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc-cc-ccCCCCCc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV-AS-LMGGLGPH  166 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~-~~-~~~~~~~~  166 (285)
                      .++++|+||||||....  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||. .+ ..+.++..
T Consensus        82 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  159 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVF--ERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRS  159 (264)
T ss_dssp             HHSCCCEEECCCCCCCC--SCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCH
T ss_pred             HhCCCCEEEECCccccc--CCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCc
Confidence            99999999999995321  2257788999999999999999999999999999988888999999997 33 45667788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|.|++.....+.                ......  ...|.+++.+
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------------~~~~~~--~~~p~~r~~~  221 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE----------------ARQLKE--HNTPIGRSGT  221 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH----------------HHHC----------CCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH----------------HHHHHh--hcCCCCCCcC
Confidence            9999999999999999999999999999999999999987643211                111111  1246788899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |||+|++++||+++.+.++||++|.+|||++....+
T Consensus       222 ~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~~  257 (264)
T 3i4f_A          222 GEDIARTISFLCEDDSDMITGTIIEVTGAVDVIHRE  257 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC--
T ss_pred             HHHHHHHHHHHcCcccCCCCCcEEEEcCceeeccCC
Confidence            999999999999999999999999999999987654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1e-46  Score=323.81  Aligned_cols=256  Identities=23%  Similarity=0.234  Sum_probs=210.2

Q ss_pred             ccccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCchhh-HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDDAAG-IALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         9 ~~~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ||.+|++|++|||||  ++|||++++++|+++|++|++++|+.+.. ++..+++   +.++.++++|++|.+++++++++
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHH
Confidence            355789999999999  99999999999999999999999988663 4444333   45688999999999999999999


Q ss_pred             HHHHcC---CccEEEECCCCCCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC
Q 040531           86 TISKHG---RLDILFNNAGVLGNQS-KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG  161 (285)
Q Consensus        86 i~~~~~---~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~  161 (285)
                      +.+.++   ++|+||||||+..... ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+ .+
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~  154 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RA  154 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SC
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cc
Confidence            999999   9999999999864200 0256788899999999999999999999999999964  489999999776 67


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH---HHHHHhhhh
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK---MEELVRGLA  238 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  238 (285)
                      .+.+..|++||+|+++|+++++.|++++||+||+|+||+|+|++.......        ...++..+.   ..+.... .
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~  225 (269)
T 2h7i_A          155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGG--------ALGEEAGAQIQLLEEGWDQ-R  225 (269)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTT--------TTCHHHHHHHHHHHHHHHH-H
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccc--------cchhhHHHHHHHHHHhhhc-c
Confidence            788899999999999999999999999999999999999999987643211        000111111   1111111 2


Q ss_pred             cccC-CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          239 NLKG-VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       239 ~~~~-~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .|.+ ++.+|||+|++++||+|+.++|+||++|.+|||++..
T Consensus       226 ~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          226 APIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             CTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            4677 6899999999999999999999999999999998763

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.1e-47  Score=326.47  Aligned_cols=247  Identities=26%  Similarity=0.391  Sum_probs=215.7

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhh-HHHHHHhhc-CCCceEEEeccCCCHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAG-IALADSLLS-SSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~-~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      .++++++|++|||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.+ .+.++.++++|++|.++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            4467999999999999  9999999999999999999999887655 555555543 36789999999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--  162 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--  162 (285)
                      ++.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.  
T Consensus        94 ~~~~~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  169 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATAD----SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP  169 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCC----SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS
T ss_pred             HHHHHcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC
Confidence            999999999999999998754    56788899999999999999999999999999988888999999999887765  


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|++||+|+++|+++++.|++++ |+||+|+||+|+|++.+...+                +....+..  ..+.+
T Consensus       170 ~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~--~~~~~  230 (267)
T 3gdg_A          170 QEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPK----------------ETQQLWHS--MIPMG  230 (267)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCH----------------HHHHHHHT--TSTTS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCH----------------HHHHHHHh--cCCCC
Confidence            467899999999999999999999987 999999999999998754211                11112222  35778


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++.+|+|+|++++||+++.+.++||++|.+|||++.
T Consensus       231 r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          231 RDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             SCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            899999999999999999999999999999999986

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.3e-46  Score=323.84  Aligned_cols=257  Identities=25%  Similarity=0.388  Sum_probs=215.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+. .++..+.+.+.+.++.++++|++|.++++++++++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999998764 4555566665667899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC-Ccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG-PHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~-~~~  167 (285)
                      .++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|  ++.|+||++||..+..+.++ ...
T Consensus       104 ~~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~  177 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSF----GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAV  177 (283)
T ss_dssp             HHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHH
T ss_pred             HcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcc
Confidence            99999999999998643    567888999999999999999999999999999  35689999999988877664 889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++.........   ......  ..+....+......+.+++.+|
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~p~~r~~~p  252 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYI---PNGENL--SNEEVDEYAAVQWSPLRRVGLP  252 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGS---TTCTTC--CHHHHHHHHHHHSCTTCSCBCH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhcc---cccccc--CHHHHHHHHhhcCCCCCCCcCH
Confidence            99999999999999999999999999999999999998765322100   000000  0111222221112477889999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+|++++||+++.++|+||++|.+|||++
T Consensus       253 ~dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          253 IDIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            999999999999999999999999999986

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.2e-46  Score=326.37  Aligned_cols=249  Identities=28%  Similarity=0.350  Sum_probs=209.6

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhh-cCCCceEEEeccCCC----HHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLL-SSSPLVTYLHCDVSL----EQDIQ   80 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~D~s~----~~~i~   80 (285)
                      ....++|++|++|||||++|||++++++|+++|++|++++|+. +.++++.+++. +.+.++.++++|+++    .++++
T Consensus        15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHH
Confidence            3445578999999999999999999999999999999999998 88887777775 446679999999999    99999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCC-----CC-----CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC----
Q 040531           81 NLINVTISKHGRLDILFNNAGVLGNQSKHKSI-----TD-----FDANEFDNIIRINVRGAALGMKYAAKVMVPRR----  146 (285)
Q Consensus        81 ~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----  146 (285)
                      ++++++.+.++++|+||||||+...    .++     .+     .+.++|++.+++|+.+++.++++++|.|++++    
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  170 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYP----TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCT  170 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC----CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC----CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCC
Confidence            9999999999999999999998643    344     55     78899999999999999999999999998766    


Q ss_pred             --CceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCch
Q 040531          147 --SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCE  224 (285)
Q Consensus       147 --~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  224 (285)
                        .++||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++ . .. .            
T Consensus       171 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-~------------  235 (288)
T 2x9g_A          171 SSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-E------------  235 (288)
T ss_dssp             CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-H------------
T ss_pred             CCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-h------------
Confidence              78999999999998989999999999999999999999999999999999999999998 3 11 1            


Q ss_pred             HHHHHHHHHHhhhhcccCCC-CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          225 EEEEKMEELVRGLANLKGVT-LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~-~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                         +....+..  ..+.+++ .+|+|+|++++||+++.++++||+.|.+|||+++.
T Consensus       236 ---~~~~~~~~--~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          236 ---EEKDKWRR--KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             ---HHHHHHHH--TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ---HHHHHHHh--hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence               11112222  2466777 89999999999999999999999999999998764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1e-46  Score=321.22  Aligned_cols=243  Identities=36%  Similarity=0.493  Sum_probs=214.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999988877766655   45688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++
T Consensus        79 ~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  154 (254)
T 1hdc_A           79 SVDGLVNNAGISTG----MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGAS  154 (254)
T ss_dssp             CCCEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHH
Confidence            99999999998643    56778899999999999999999999999999987778999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC-CHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL-KARDI  250 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~eev  250 (285)
                      |+|++.|+++++.|++++||+||+|+||+++|++.....+.   ...             ....  ..|.+++. +|+|+
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~-------------~~~~--~~p~~~~~~~~~dv  216 (254)
T 1hdc_A          155 KWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR---QGE-------------GNYP--NTPMGRVGNEPGEI  216 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC---CST-------------TSCT--TSTTSSCB-CHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh---HHH-------------HHHh--cCCCCCCCCCHHHH
Confidence            99999999999999999999999999999999987643111   000             0000  13556788 99999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+.++||+++.+.+++|+.|.+|||++..
T Consensus       217 A~~v~~l~s~~~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          217 AGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             HHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            99999999999999999999999998763

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.3e-48  Score=329.15  Aligned_cols=243  Identities=27%  Similarity=0.367  Sum_probs=196.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|+|++|++|||||++|||++++++|+++|++|++++|+.+..   .+.+   +.++.++++|++|.++++++++.+.+ 
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL---GDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT---CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc---CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999966543   2233   56799999999999999999998877 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC--------CCCceEEEEcccccccC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP--------RRSGCIISTASVASLMG  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~g~ii~vss~~~~~~  161 (285)
                      ++++|+||||||+........+..+.+.++|++.+++|+.+++.++++++|.|++        ++.|+||++||..+..+
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG  156 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred             hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence            8999999999998543111122335799999999999999999999999999987        56899999999999988


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+                +.......  ..+.
T Consensus       157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----------------~~~~~~~~--~~~~  218 (257)
T 3tl3_A          157 QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE----------------EARASLGK--QVPH  218 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH----------------HHHHHHHH--TSSS
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH----------------HHHHHHHh--cCCC
Confidence            88889999999999999999999999999999999999999998754211                11112222  2345


Q ss_pred             -CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          242 -GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       242 -~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                       +++.+|||+|++++||+++  .++||++|.+|||+++.
T Consensus       219 ~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          219 PSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             SCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             CCCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence             8899999999999999986  79999999999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.3e-47  Score=324.45  Aligned_cols=238  Identities=23%  Similarity=0.254  Sum_probs=204.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--C-CceEEEeccCCCHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--S-PLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  + .++.++++|++|.++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999888887553  3 67899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .++++++|+||||||+...    .++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus        82 ~~~~g~iD~lvnnAg~~~~----~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAMFMD----GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGG  156 (250)
T ss_dssp             HHHHCCEEEEEECCCCCCC----CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTT
T ss_pred             HHhcCCCCEEEECCCcCCC----CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCc
Confidence            9999999999999998654    445 67899999999999999999999999999888889999999999988777789


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++.......                          .+.+++.+
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--------------------------~~~~~~~~  210 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP--------------------------FKDEEMIQ  210 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC--------------------------SCGGGSBC
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC--------------------------cccccCCC
Confidence            9999999999999999999999999999999999999997653221                          23456789


Q ss_pred             HHHHHHHHHHHhcCC-CCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDE-SKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~~~  278 (285)
                      |||+|++++||+++. ..+++|..|.+|||...
T Consensus       211 p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          211 PDDLLNTIRCLLNLSENVCIKDIVFEMKKSIIE  243 (250)
T ss_dssp             HHHHHHHHHHHHTSCTTEECCEEEEEEHHHHHC
T ss_pred             HHHHHHHHHHHHcCCCceEeeEEEEEeeccccc
Confidence            999999999999865 55668889999999653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.2e-46  Score=320.66  Aligned_cols=255  Identities=32%  Similarity=0.434  Sum_probs=215.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++++|++|.++++++++++.++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999888777666553   26788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|
T Consensus        84 ~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTM----RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY  159 (263)
T ss_dssp             HTCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhH
Confidence            9999999999998643    5678889999999999999999999999999998776 7999999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|++.++++++.|++++||+||+|+||+++|++............  .   ....+.......  ..|.+++.+|+
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~---~~~~~~~~~~~~--~~p~~~~~~~~  232 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELR--G---MTPEAVRAEYVS--LTPLGRIEEPE  232 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHH--T---SCHHHHHHHHHH--TCTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcccccccc--c---cCcHHHHHHHHh--cCCCCCCcCHH
Confidence            9999999999999999999999999999999999998654211000000  0   000111112222  24678899999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+++.+++++|+.|.+|||+++
T Consensus       233 dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          233 DVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            999999999999999999999999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-46  Score=320.58  Aligned_cols=245  Identities=34%  Similarity=0.474  Sum_probs=214.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            588999999999999999999999999999999999998888777766   56789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++|
T Consensus        80 ~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~s  154 (253)
T 1hxh_A           80 TLNVLVNNAGILLP----GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSAS  154 (253)
T ss_dssp             SCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHH
Confidence            99999999998643    5678889999999999999999999999999998776 999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC--CcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh--hhcccCCCCCH
Q 040531          172 KHAIVGLTKNTACELGKY--GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG--LANLKGVTLKA  247 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~--~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  247 (285)
                      |+|++.++++++.|++++  ||+||+|+||+++|++.......           ...    ......  ...|.+++.+|
T Consensus       155 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~~----~~~~~~~~~~~p~~~~~~~  219 (253)
T 1hxh_A          155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK-----------GVS----KEMVLHDPKLNRAGRAYMP  219 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT-----------TCC----HHHHBCBTTTBTTCCEECH
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch-----------hhh----HHHHhhhhccCccCCCCCH
Confidence            999999999999999988  99999999999999987642211           000    010111  02356778899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++++||+++.+++++|+.|.+|||++..
T Consensus       220 ~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          220 ERIAQLVLFLASDESSVMSGSELHADNSILGM  251 (253)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSCTTT
T ss_pred             HHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999999999999999999999999998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-46  Score=332.34  Aligned_cols=248  Identities=23%  Similarity=0.258  Sum_probs=214.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhh-cCCCceEEEeccCCCHH---------
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLL-SSSPLVTYLHCDVSLEQ---------   77 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~D~s~~~---------   77 (285)
                      .|.+|++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. +.+.++.++++|++|.+         
T Consensus        40 ~m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           40 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence            34458999999999999999999999999999999999 99988888887775 44567999999999999         


Q ss_pred             --------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCC--------------HHHHHHHHHhhhhhHHHHH
Q 040531           78 --------DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD--------------ANEFDNIIRINVRGAALGM  135 (285)
Q Consensus        78 --------~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~  135 (285)
                              +++++++++.+.++++|+||||||+...    .++.+.+              .++|++.+++|+.+++.++
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~----~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~  195 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP----TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  195 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCSCC-------------CHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC----CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence                    9999999999999999999999998643    4666777              8999999999999999999


Q ss_pred             HHHHHhhcCCC------CceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh
Q 040531          136 KYAAKVMVPRR------SGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       136 ~~~~~~~~~~~------~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~  209 (285)
                      ++++|.|++++      .++||++||..+..+.++...|+++|+|++.|++.++.|++++||+||+|+||+|+|++ ...
T Consensus       196 ~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~  274 (328)
T 2qhx_A          196 KAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP  274 (328)
T ss_dssp             HHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC
T ss_pred             HHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc
Confidence            99999998766      79999999999999989999999999999999999999999999999999999999998 321


Q ss_pred             hcccccccCCCCCchHHHHHHHHHHhhhhcccC-CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          210 WKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG-VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                       +                +.......  ..|.+ ++.+|||+|++++||+++.+.++||++|.+|||+++.+
T Consensus       275 -~----------------~~~~~~~~--~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  327 (328)
T 2qhx_A          275 -P----------------AVWEGHRS--KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  327 (328)
T ss_dssp             -H----------------HHHHHHHT--TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             -H----------------HHHHHHHh--hCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccCc
Confidence             1                11222222  23566 88999999999999999999999999999999998754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-46  Score=323.71  Aligned_cols=251  Identities=32%  Similarity=0.522  Sum_probs=213.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.    ++.++++|++|.++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999888777665542    47889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|+++ .++||++||..+..+.++...|++
T Consensus        81 g~iD~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  156 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPP---QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVA  156 (270)
T ss_dssp             SCCCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHH
Confidence            9999999999986422   567888999999999999999999999999999654 699999999988888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++++++++.|++++||+||+|+||+|+|++.......        .  ....+.......  ..|.+++.+|+|+
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~--------~--~~~~~~~~~~~~--~~p~~r~~~p~dv  224 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL--------M--PDPRASIREGML--AQPLGRMGQPAEV  224 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT--------S--SSHHHHHHHHHH--TSTTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhc--------c--cchHHHHHHHhh--cCCCCCCcCHHHH
Confidence            999999999999999999999999999999999987543211        0  011111111111  3477889999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |+.++||+++ ++|+||++|.+|||++...++
T Consensus       225 a~~v~~L~s~-~~~itG~~i~vdGG~~~~~~~  255 (270)
T 1yde_A          225 GAAAVFLASE-ANFCTGIELLVTGGAELGYGC  255 (270)
T ss_dssp             HHHHHHHHHH-CTTCCSCEEEESTTTTSCC--
T ss_pred             HHHHHHHccc-CCCcCCCEEEECCCeecccCc
Confidence            9999999998 789999999999999875443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2e-46  Score=321.66  Aligned_cols=245  Identities=26%  Similarity=0.396  Sum_probs=215.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEE-EecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.++.+|++|||||++|||++++++|+++|++|++ ..|+.+..++..+++.+.+.++.++++|++|.++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999966 45677778888888877788899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc-CCCCceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .++++|+||||||+...    .++.+.+.++|++.+++|+.+++.+++++++.|. +++.++||++||..+..+.++...
T Consensus       101 ~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARD----AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVN  176 (267)
T ss_dssp             HHCCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHH
T ss_pred             HhCCccEEEECCCCCCC----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCch
Confidence            99999999999998754    5778899999999999999999999999998886 566899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++....                 .+.......  ..+.+++.+|
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------------~~~~~~~~~--~~p~~~~~~~  237 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----------------ESALKEAMS--MIPMKRMGQA  237 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----------------HHHHHHHHH--TCTTCSCBCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----------------HHHHHHHHh--cCCCCCCcCH
Confidence            999999999999999999999999999999999999986432                 112222222  2467888999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+|++++||+++.+.++||++|.+|||+.
T Consensus       238 edva~~~~~L~s~~~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          238 EEVAGLASYLMSDIAGYVTRQVISINGGML  267 (267)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhCCcccCccCCEEEeCCCcC
Confidence            999999999999999999999999999973

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-47  Score=323.79  Aligned_cols=237  Identities=27%  Similarity=0.399  Sum_probs=207.6

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ...|+++++|++|||||++|||++++++|+++|++|++++|+.+...         ..++.++++|++|.++++++++++
T Consensus        20 ~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           20 FQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999866432         236899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc--CCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM--GGLG  164 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~--~~~~  164 (285)
                      .++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..  +.++
T Consensus        91 ~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  166 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLA----KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMP  166 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCC
T ss_pred             HHHCCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCc
Confidence            9999999999999998654    678889999999999999999999999999999988899999999987764  3445


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....                .+   ....  ..|.+++
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----------------~~---~~~~--~~p~~r~  225 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----------------HS---TLAG--LHPVGRM  225 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----------------HH---HHHT--TSTTSSC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----------------HH---HHhc--cCCCCCC
Confidence            6889999999999999999999999999999999999999864311                01   1111  3577889


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .+|+|+|++++||  +.+.+++|++|.+|||++.+
T Consensus       226 ~~~~dva~av~~L--~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          226 GEIRDVVDAVLYL--EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             BCHHHHHHHHHHH--HHCTTCCSCEEEESTTGGGC
T ss_pred             cCHHHHHHHHHHh--cccCCCCCcEEEECCCeecc
Confidence            9999999999999  56789999999999999876

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-46  Score=322.57  Aligned_cols=241  Identities=32%  Similarity=0.464  Sum_probs=209.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   ..++.++++|++|.++++++++++.+.+
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999988877776655   3578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.| ++ .|+||++||..+. +.++...|++
T Consensus        79 g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~a  151 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHS----ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAA  151 (263)
T ss_dssp             SCCCEEEEGGGGTTT----TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHH
Confidence            999999999998643    567788999999999999999999999999999 54 7999999999887 7777889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+++++++++.|++++||+||+|+||+|+|++.....             .   +.......  ..|.+++.+|+|+
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~---~~~~~~~~--~~p~~~~~~p~dv  213 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-------------P---WAWEQEVG--ASPLGRAGRPEEV  213 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-------------H---HHHHHHHH--TSTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC-------------H---HHHHHHHh--cCCCCCCcCHHHH
Confidence            9999999999999999999999999999999999865320             1   11111222  2466788999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+.++||+++.+++++|+.|.+|||++..
T Consensus       214 A~~v~~l~s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          214 AQAALFLLSEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCcccc
Confidence            99999999999999999999999999865

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-46  Score=316.57  Aligned_cols=236  Identities=28%  Similarity=0.379  Sum_probs=211.5

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccC--CCHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDV--SLEQDIQNLIN   84 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~--s~~~~i~~~~~   84 (285)
                      ..+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|+  ++.++++++++
T Consensus         7 ~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A            7 AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             CCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            44567899999999999999999999999999999999999999998888886654 5667777777  99999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG  164 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~  164 (285)
                      ++.+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  163 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPR---TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN  163 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCC---SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT
T ss_pred             HHHHhCCCCCEEEECCccCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC
Confidence            9999999999999999986432   6788899999999999999999999999999998888899999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ...|+++|+|+++|+++++.|+++ ++|+||+|+||+|+|++.....+.                          ....+
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~--------------------------~~~~~  217 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD--------------------------ENPLN  217 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT--------------------------SCGGG
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc--------------------------cCccC
Confidence            999999999999999999999976 899999999999999997654332                          11123


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEe
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      ..+|+|+|+.++||++++++++||++|.+
T Consensus       218 ~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          218 NPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             SCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             CCCHHHHHHHHHHHhCchhccccCeeecC
Confidence            56899999999999999999999999986

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-46  Score=321.61  Aligned_cols=243  Identities=23%  Similarity=0.346  Sum_probs=204.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999999999888877888999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        82 iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  157 (264)
T 3tfo_A           82 IDVLVNNAGVMPL----SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATK  157 (264)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHH
Confidence            9999999998643    678899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+++|+++++.|+ + ||+||+|+||+|+|++.......            ...... .      .......+|+|+|+
T Consensus       158 aal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~------------~~~~~~-~------~~~~~~~~pedvA~  216 (264)
T 3tfo_A          158 FAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHE------------ETMAAM-D------TYRAIALQPADIAR  216 (264)
T ss_dssp             HHHHHHHHHHHHHC-S-SEEEEEEEECCC------------------------------------------CCCHHHHHH
T ss_pred             HHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccch------------hHHHHH-H------hhhccCCCHHHHHH
Confidence            99999999999998 5 99999999999999997643221            000000 0      01122469999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +++||+++...+.+|+.+..++|+....
T Consensus       217 ~v~~l~s~~~~~~~~~i~i~p~~~~~~~  244 (264)
T 3tfo_A          217 AVRQVIEAPQSVDTTEITIRPTASGNAE  244 (264)
T ss_dssp             HHHHHHHSCTTEEEEEEEEEECC-----
T ss_pred             HHHHHhcCCccCccceEEEecCcccccc
Confidence            9999999999999999999999987654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.5e-47  Score=335.81  Aligned_cols=247  Identities=29%  Similarity=0.462  Sum_probs=215.2

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC----------chhhHHHHHHhhcCCCceEEEeccCCCH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID----------DAAGIALADSLLSSSPLVTYLHCDVSLE   76 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~D~s~~   76 (285)
                      ..+|.++++|++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.+.++.++++|++|.
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            445667999999999999999999999999999999999998          6777888888877778899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC------CceE
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR------SGCI  150 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~i  150 (285)
                      ++++++++++.++++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|.+..      .|+|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~I  174 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRD----RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRI  174 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEE
Confidence            99999999999999999999999998754    5788899999999999999999999999999986432      4899


Q ss_pred             EEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH
Q 040531          151 ISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM  230 (285)
Q Consensus       151 i~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      |++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|++.......            .    .
T Consensus       175 V~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~------------~----~  237 (322)
T 3qlj_A          175 INTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE------------M----M  237 (322)
T ss_dssp             EEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------------
T ss_pred             EEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh------------h----h
Confidence            9999999999999999999999999999999999999999999999999 999987654321            0    0


Q ss_pred             HHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          231 EELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ..     .....+..+|+|+|++++||+++.+.++||++|.+|||+...
T Consensus       238 ~~-----~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          238 AT-----QDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             -----------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             hc-----cccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            00     011224568999999999999999999999999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3e-46  Score=321.90  Aligned_cols=245  Identities=27%  Similarity=0.340  Sum_probs=206.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcC-CCceEEEeccCCCH----HHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSS-SPLVTYLHCDVSLE----QDIQNLIN   84 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~----~~i~~~~~   84 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++.+. +.++.++++|++|.    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            3478999999999999999999999999999999999 888888887777554 56789999999999    99999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhhHHHHHHHHHHhhcCCCC------
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDA-----------NEFDNIIRINVRGAALGMKYAAKVMVPRRS------  147 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------  147 (285)
                      ++.+.++++|+||||||+...    .++.+.+.           ++|++.+++|+.+++.++++++|.|+ ++.      
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~  161 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYP----TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRN  161 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC----CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCC
T ss_pred             HHHHhcCCCCEEEECCCCCCC----CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCC
Confidence            999999999999999998643    45667777           99999999999999999999999997 555      


Q ss_pred             ceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          148 GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       148 g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      ++||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|+  .. ..            .   
T Consensus       162 g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~-~~------------~---  223 (276)
T 1mxh_A          162 LSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PA-MP------------Q---  223 (276)
T ss_dssp             EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SS-SC------------H---
T ss_pred             cEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--cc-CC------------H---
Confidence            899999999999999999999999999999999999999999999999999999998  21 11            1   


Q ss_pred             HHHHHHHhhhhcccCC-CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          228 EKMEELVRGLANLKGV-TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~-~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +.......  ..+.++ ..+|+|+|++++||+++.+.+++|++|.+|||+++.+
T Consensus       224 ~~~~~~~~--~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  275 (276)
T 1mxh_A          224 ETQEEYRR--KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  275 (276)
T ss_dssp             HHHHHHHT--TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHh--cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhccC
Confidence            11112222  246677 8899999999999999999999999999999998654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.1e-46  Score=332.27  Aligned_cols=237  Identities=24%  Similarity=0.270  Sum_probs=212.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-------hHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-------GIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.       +.+..+++.+.+.++.++++|++|.+++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998875       45666677666788999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--  161 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--  161 (285)
                      +++.++++++|+||||||+...    .++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+  
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~  196 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISL----TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW  196 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred             HHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence            9999999999999999998754    6788899999999999999999999999999999888899999999988877  


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCC-ccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFG-VATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      .++...|++||+|+++|+++++.|++ +||+||+|+||+ ++|++.+....                          ..+
T Consensus       197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~--------------------------~~~  249 (346)
T 3kvo_A          197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG--------------------------PGI  249 (346)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC----------------------------C
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc--------------------------ccc
Confidence            67889999999999999999999999 899999999995 99988654321                          124


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      .++..+|+|+|++++||+++ ++++||+++ +|||+....
T Consensus       250 ~~r~~~pedvA~~v~~L~s~-~~~itG~~i-vdgg~~~~~  287 (346)
T 3kvo_A          250 ESQCRKVDIIADAAYSIFQK-PKSFTGNFV-IDENILKEE  287 (346)
T ss_dssp             GGGCBCTHHHHHHHHHHHTS-CTTCCSCEE-EHHHHHHHT
T ss_pred             cccCCCHHHHHHHHHHHHhc-CCCCCceEE-ECCcEehhc
Confidence            56678999999999999999 999999998 999976543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.9e-46  Score=319.20  Aligned_cols=239  Identities=19%  Similarity=0.184  Sum_probs=198.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|.++++++++++.+.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            46789999999999999999999999999999999999999999999998877888999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                       +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        82 -g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (252)
T 3h7a_A           82 -APLEVTIFNVGANVN----FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFA  156 (252)
T ss_dssp             -SCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHH
T ss_pred             -CCceEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHH
Confidence             999999999998654    678889999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEE-EEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRV-NCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v-~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +||+|+++|+++++.|++++||+| |+|+||+|+|++.+...+.                .......  ..+.+ ..+|+
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~----------------~~~~~~~--~~~~~-~~~pe  217 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ----------------MFGKDAL--ANPDL-LMPPA  217 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------------CCHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh----------------hhhhhhh--cCCcc-CCCHH
Confidence            999999999999999999999999 9999999999997654221                1011111  12444 78999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEe
Q 040531          249 DIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      |+|+.++||++++.++++|+....
T Consensus       218 dvA~~~~~l~s~~~~~~~~~i~~~  241 (252)
T 3h7a_A          218 AVAGAYWQLYQQPKSAWTFEMEIR  241 (252)
T ss_dssp             HHHHHHHHHHHCCGGGBCSEEEEB
T ss_pred             HHHHHHHHHHhCchhcceeeEEee
Confidence            999999999998888899987653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-46  Score=319.59  Aligned_cols=245  Identities=27%  Similarity=0.329  Sum_probs=215.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+++|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++.+.+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            3789999999999999999999999999999885 677888888888887778889999999999999999999988776


Q ss_pred             C------CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC
Q 040531           91 G------RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG  164 (285)
Q Consensus        91 ~------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~  164 (285)
                      +      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++||..+..+.++
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~  157 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPG----AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPD  157 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTSCCTT
T ss_pred             cccccCCcccEEEECCCCCCC----CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhccCCCC
Confidence            4      49999999998643    5678889999999999999999999999999983  4689999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......               ........ ...+.+++
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------------~~~~~~~~-~~~~~~~~  221 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD---------------PMMKQYAT-TISAFNRL  221 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS---------------HHHHHHHH-HTSTTSSC
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc---------------HHHHHhhh-ccCCcCCC
Confidence            999999999999999999999999999999999999999997654321               11111111 13567888


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+|+|+|++++||+++.+.+++|++|.+|||+++
T Consensus       222 ~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          222 GEVEDIADTAAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             CCHHHHHHHHHHHhCcccCCccCCEEEecCCeeC
Confidence            9999999999999999999999999999999864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=4.9e-46  Score=318.03  Aligned_cols=239  Identities=40%  Similarity=0.631  Sum_probs=213.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++++|++|.++++++++++.+++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999988877766663   248889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        80 g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (260)
T 1nff_A           80 GGLHVLVNNAGILNI----GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTA  155 (260)
T ss_dssp             SCCCEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHH
Confidence            999999999998643    5677889999999999999999999999999998777899999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++++++++.|++++||+||+|+||+|+|++..  +.. .              .+    .  ..+.+++.+|+|+
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~-~--------------~~----~--~~~~~~~~~~~dv  212 (260)
T 1nff_A          156 TKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVP-E--------------DI----F--QTALGRAAEPVEV  212 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSC-T--------------TC----S--CCSSSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cch-h--------------hH----H--hCccCCCCCHHHH
Confidence            9999999999999999999999999999999999854  111 0              00    0  1356778899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |++++||+++.+.+++|+.+.+|||++..
T Consensus       213 A~~v~~l~s~~~~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          213 SNLVVYLASDESSYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCeecc
Confidence            99999999999999999999999998763

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=3.4e-46  Score=319.86  Aligned_cols=251  Identities=19%  Similarity=0.205  Sum_probs=210.3

Q ss_pred             cccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      |.+|++|++|||||+  +|||++++++|+++|++|++++|+. ..++..+++.+..+...++++|++|.++++++++++.
T Consensus         4 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            4 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             -CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHH
Confidence            445899999999999  9999999999999999999999987 4444555554333345789999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITD-FDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+||||||+........++.+ .+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++..
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  160 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYN  160 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTT
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCch
Confidence            999999999999998642101145666 899999999999999999999999999964  58999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|++.++++++.|++++||+||+|+||+|+|++......              ..+.......  ..|.+++.+
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------------~~~~~~~~~~--~~p~~~~~~  224 (265)
T 1qsg_A          161 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--------------FRKMLAHCEA--VTPIRRTVT  224 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT--------------HHHHHHHHHH--HSTTSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc--------------cHHHHHHHHh--cCCCCCCCC
Confidence            999999999999999999999999999999999999998653210              1111112211  246778899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|+|++++||+++.+.+++|+.|.+|||++..
T Consensus       225 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          225 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999999999999999999999999999865

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3e-46  Score=319.49  Aligned_cols=253  Identities=19%  Similarity=0.204  Sum_probs=212.4

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      +.++|++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++++|++|.++++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3457899999999999  99999999999999999999999875 44444455432334788999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++..
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  158 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCch
Confidence            9999999999999997532000145778899999999999999999999999999963  58999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|++.++++++.|++++||+||+|+||+|+|++......              ..+.......  ..|.+++.+
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------------~~~~~~~~~~--~~p~~~~~~  222 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG--------------FTKMYDRVAQ--TAPLRRNIT  222 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT--------------HHHHHHHHHH--HSTTSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc--------------cHHHHHHHHh--cCCCCCCCC
Confidence            999999999999999999999999999999999999998643210              1111122222  246788899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |||+|++++||+++.+.+++|+.|.+|||++...
T Consensus       223 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          223 QEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence            9999999999999999999999999999998753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2e-45  Score=314.96  Aligned_cols=250  Identities=30%  Similarity=0.450  Sum_probs=212.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++|++|++|||||++|||++++++|+++|++|++++|+.+.           +.++.++++|++|.++++++++++.+.
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999998754           346888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        72 ~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  147 (264)
T 2dtx_A           72 YGSISVLVNNAGIESY----GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYV  147 (264)
T ss_dssp             HSCCCEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHH
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHH
Confidence            9999999999998643    567888999999999999999999999999999888889999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|++.|+++++.|++++ |+||+|+||+++|++.........     ........+.......  ..+.+++.+|+|
T Consensus       148 ~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~p~~~~~~p~d  219 (264)
T 2dtx_A          148 TSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEV-----GSDPMRIEKKISEWGH--EHPMQRIGKPQE  219 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHH-----CSCHHHHHHHHHHHHH--HSTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhccc-----ccCchhhHHHHHHHHh--cCCCCCCcCHHH
Confidence            99999999999999999998 999999999999998754311000     0000000011112211  246678899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +|++++||+++.+++++|+.|.+|||++...+.
T Consensus       220 vA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~  252 (264)
T 2dtx_A          220 VASAVAFLASREASFITGTCLYVDGGLSIRAPI  252 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             HHHHHHHHhCchhcCCCCcEEEECCCcccCCCC
Confidence            999999999999999999999999999876554

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.4e-45  Score=315.00  Aligned_cols=254  Identities=29%  Similarity=0.429  Sum_probs=221.7

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      |+.++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.+.++.++++|++|.++++++++++.
T Consensus         1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999 7777777777776666788999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++..
T Consensus        81 ~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  156 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENP----VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFV  156 (261)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCH
T ss_pred             HHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCcc
Confidence            999999999999998643    5677889999999999999999999999999998776 78999999999988888999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|++.+++.++.|++++||++++|+||+++|++.......              .+.......  ..+.++..+
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~~  220 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--------------PEQRADVES--MIPMGYIGE  220 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--------------HHHHHHHHT--TCTTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC--------------hhHHHHHHh--cCCCCCCcC
Confidence            9999999999999999999999999999999999999987643211              111112211  235677889


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |+|+|++++||+++.+.+++|+.|.+|||++....|
T Consensus       221 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  256 (261)
T 1gee_A          221 PEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             HHHHHHHHHHHhCccccCCCCcEEEEcCCcccCCCC
Confidence            999999999999998899999999999999886655

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.2e-46  Score=316.62  Aligned_cols=244  Identities=30%  Similarity=0.384  Sum_probs=196.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|++|++|||||++|||++++++|+++|++|++++|+.+.        .+ . .+.++.+|++|.++++++++++.+++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~-~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-Y-PFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-C-SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-C-CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998652        11 1 27889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        73 g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~  148 (250)
T 2fwm_X           73 ERLDALVNAAGILRM----GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGA  148 (250)
T ss_dssp             SCCCEEEECCCCCCC----CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHH
Confidence            999999999998643    5678889999999999999999999999999998877899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH-HHHHHH--hhhhcccCCCCCH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE-KMEELV--RGLANLKGVTLKA  247 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~  247 (285)
                      +|+|++.++++++.|++++||+||+|+||+++|++.......           ....+ .+....  .....|.++..+|
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~p~~~~~~p  217 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS-----------DDAEEQRIRGFGEQFKLGIPLGKIARP  217 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------------------CH
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC-----------hhHHHHHHhhhhhcccccCCCCCCcCH
Confidence            999999999999999999999999999999999986542111           00000 010000  0002356778899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++++||+++.+++++|++|.+|||++++
T Consensus       218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          218 QEIANTILFLASDLASHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            99999999999999999999999999998754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-46  Score=317.03  Aligned_cols=246  Identities=22%  Similarity=0.246  Sum_probs=207.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|++|||||++|||++++++|+++|  +.|++++|+.+.++++.+++   +.++.++++|++|.++++++++++.+++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999985  78999999998888877766   457899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||
T Consensus        79 id~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK  154 (254)
T 3kzv_A           79 IDSLVANAGVLEPV---QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSK  154 (254)
T ss_dssp             CCEEEEECCCCCCC---TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHH
T ss_pred             ccEEEECCcccCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHH
Confidence            99999999986432   5788899999999999999999999999999997655 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+++|+++++.|+  +||+||+|+||+|+|++.........    ....   ..+.......  ..+.+++.+|||+|+
T Consensus       155 ~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~----~~~~---~~~~~~~~~~--~~~~~r~~~p~dva~  223 (254)
T 3kzv_A          155 AALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVG----PSSM---SAEQLKMFRG--LKENNQLLDSSVPAT  223 (254)
T ss_dssp             HHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCC----TTTS---CHHHHHHHHH--HHTTC----CHHHHH
T ss_pred             HHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccC----cccc---CHHHHHHHHH--HHhcCCcCCcccHHH
Confidence            99999999999998  58999999999999999765432100    0001   1122222222  247788999999999


Q ss_pred             HHHHHhcCC-CCcccccEEEecCCccc
Q 040531          253 AALYLASDE-SKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~-~~~~~G~~i~vdgG~~~  278 (285)
                      +++||+++. ++|+||+.|.+|||...
T Consensus       224 ~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          224 VYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHHHHHhhcccCCCCccEEEecCcccc
Confidence            999999999 59999999999999764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.1e-45  Score=319.84  Aligned_cols=252  Identities=23%  Similarity=0.271  Sum_probs=211.8

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +|++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++++|++|.++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999875 44455555433334788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|+++ .|+||++||..+..+.++...|+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence            99999999999986421112457788999999999999999999999999999754 69999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+++++++++.|++++||+||+|+||+|+|++.....              ...+.......  ..|.+++.+|+|
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------~~~~~~~~~~~--~~p~~~~~~~~d  239 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT--------------GFHLLMEHTTK--VNPFGKPITIED  239 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT--------------THHHHHHHHHH--HSTTSSCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc--------------chHHHHHHHHh--cCCCCCCcCHHH
Confidence            99999999999999999999999999999999999854321              01111112211  246778899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|++++||+++.+.+++|++|.+|||++....
T Consensus       240 va~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~  271 (285)
T 2p91_A          240 VGDTAVFLCSDWARAITGEVVHVDNGYHIMGV  271 (285)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTGGGBSC
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCcccccc
Confidence            99999999999999999999999999987543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.8e-46  Score=320.07  Aligned_cols=243  Identities=28%  Similarity=0.424  Sum_probs=205.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+.+.+.+.++.++++|++|.++++++++++.+.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999887 77777888888888777788999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC---CCceEEEEcccccccCCC-CCccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR---RSGCIISTASVASLMGGL-GPHAY  168 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~ii~vss~~~~~~~~-~~~~Y  168 (285)
                      +|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++.   +.++||++||..+..+.+ +...|
T Consensus       105 id~li~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  181 (272)
T 4e3z_A          105 LDGLVNNAGIVDYP---QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDY  181 (272)
T ss_dssp             CCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHH
T ss_pred             CCEEEECCCCCCCC---CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchh
Confidence            99999999986432   567888999999999999999999999999999763   478999999999888766 67789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+|++|+||+|+|++.......               +.......  ..+.++..+||
T Consensus       182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~e  244 (272)
T 4e3z_A          182 AASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP---------------DRAREMAP--SVPMQRAGMPE  244 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------------CCTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh---------------HHHHHHhh--cCCcCCCcCHH
Confidence            99999999999999999999999999999999999986542111               11111111  24667788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      |+|++++||+++.+.+++|++|.+|||+
T Consensus       245 dvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          245 EVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCCccccccCCEEeecCCC
Confidence            9999999999999999999999999995

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=8.1e-46  Score=317.00  Aligned_cols=241  Identities=28%  Similarity=0.363  Sum_probs=208.2

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ....|.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++++|+++.+++++++++
T Consensus        20 ~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           20 DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence            34557789999999999999999999999999999999999999999999888877778899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus       100 ~~~~~g~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  176 (262)
T 3rkr_A          100 VLAAHGRCDVLVNNAGVGWFG---GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG  176 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCS---SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC
T ss_pred             HHHhcCCCCEEEECCCccCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC
Confidence            999999999999999984322   57788999999999999999999999999999988888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++|+++++.|++++||+||+|+||+|+|++.......                          .+..+.+
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------------------------~~~~~~~  230 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK--------------------------KSALGAI  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------CC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc--------------------------cccccCC
Confidence            99999999999999999999999999999999999999986542111                          1335567


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +|+|+|++++||+++.+.+++|+.+..+.|
T Consensus       231 ~p~dvA~~v~~l~s~~~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          231 EPDDIADVVALLATQADQSFISEVLVRPTL  260 (262)
T ss_dssp             CHHHHHHHHHHHHTCCTTCCEEEEEEECCC
T ss_pred             CHHHHHHHHHHHhcCccccccCcEEecccc
Confidence            999999999999999999999999988876

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-46  Score=322.29  Aligned_cols=256  Identities=32%  Similarity=0.395  Sum_probs=206.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh---hcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL---LSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   ...+.++.++++|++|.++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877777   3334578999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCC----CHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc-ccCC
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDF----DANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS-LMGG  162 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~-~~~~  162 (285)
                      +.++++|+||||||....    .++.+.    +.++|++.+++|+.+++.++++++|.|++++ |+||++||..+ ..+.
T Consensus        82 ~~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~  156 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIP----DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT  156 (278)
T ss_dssp             HHHSCCCEEEECCC-----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC
T ss_pred             HHcCCCCEEEECCCCCCC----cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC
Confidence            999999999999998643    456666    8999999999999999999999999997655 99999999988 8888


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|++||+|++.++++++.|++++||+||+|+||+|+|++.........       ......+.......  ..|.+
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~p~~  227 (278)
T 1spx_A          157 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEE-------TSKKFYSTMATMKE--CVPAG  227 (278)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------------HHHHHHHHH--HCTTS
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCch-------hhhhhhHHHHHHHh--cCCCc
Confidence            8899999999999999999999999999999999999999998653211000       00000011112211  23667


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCc-ccccEEEecCCccccc
Q 040531          243 VTLKARDIAEAALYLASDESKY-ISGHNLVVDGGFTTSK  280 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~-~~G~~i~vdgG~~~~~  280 (285)
                      ++.+|+|+|++++||+++.+.+ ++|+.|.+|||++.+.
T Consensus       228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-
T ss_pred             CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCccccc
Confidence            8899999999999999988777 9999999999987654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6.5e-46  Score=314.96  Aligned_cols=243  Identities=24%  Similarity=0.353  Sum_probs=200.2

Q ss_pred             cccccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531            4 NTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         4 ~~~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      ........+|++|++|||||++|||++++++|+++|++|++++|+.+.+++           +..+++|++|.+++++++
T Consensus         4 ~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~   72 (247)
T 1uzm_A            4 TATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAF   72 (247)
T ss_dssp             -----CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHH
T ss_pred             cccCcccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHH
Confidence            334445567899999999999999999999999999999999998765321           224899999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +++.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+
T Consensus        73 ~~~~~~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  148 (247)
T 1uzm_A           73 TAVEEHQGPVEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG  148 (247)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC---------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC
Confidence            9999999999999999998643    567889999999999999999999999999999887789999999999988888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|++||+|++.++++++.|++++||+||+|+||+++|++.....             .   +.......  ..+.++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~---~~~~~~~~--~~p~~~  210 (247)
T 1uzm_A          149 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-------------E---RIQQGALQ--FIPAKR  210 (247)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-------------H---HHHHHHGG--GCTTCS
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC-------------H---HHHHHHHh--cCCCCC
Confidence            89999999999999999999999999999999999999999865321             0   11111111  245678


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +.+|+|+|+.++||+++.+.+++|++|.+|||+++.
T Consensus       211 ~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          211 VGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMG  246 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC-
T ss_pred             CcCHHHHHHHHHHHcCccccCCcCCEEEECCCcccC
Confidence            899999999999999999999999999999998753

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=7.1e-46  Score=319.52  Aligned_cols=249  Identities=18%  Similarity=0.185  Sum_probs=211.5

Q ss_pred             ccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+|++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+++.++++|++|.++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            35889999999999  99999999999999999999999876 4445555543334578899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||+........++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            99999999999998642111146778899999999999999999999999999964  5899999999998888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+||+|+||+|+|++......              ..+.......  ..|.++..+|+
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~~~--~~p~~~~~~p~  222 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD--------------FRMILKWNEI--NAPLRKNVSLE  222 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT--------------HHHHHHHHHH--HSTTSSCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc--------------cHHHHHHHHh--cCCcCCCCCHH
Confidence            9999999999999999999999999999999999998653210              1111112211  24677889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+.++||+++.+.+++|+.+.+|||+..
T Consensus       223 dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          223 EVGNAGMYLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            999999999999999999999999999876

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-46  Score=314.71  Aligned_cols=243  Identities=34%  Similarity=0.542  Sum_probs=205.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.++++. ++    .++.++++|++|.++++    ++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~   72 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEV   72 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHh
Confidence            4689999999999999999999999999999999999877654433 22    36889999999999987    445567


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-CCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-~~~~Y~  169 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+ +...|+
T Consensus        73 ~~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  148 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHH----GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYS  148 (246)
T ss_dssp             SCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHH
T ss_pred             CCCCEEEECCccCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHH
Confidence            899999999998643    567788999999999999999999999999999877789999999998888777 888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|++.++++++.|++++||+||+|+||+++|++........          ....+.......  ..+.++..+|+|
T Consensus       149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~d  216 (246)
T 2ag5_A          149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR----------GNPEEARNDFLK--RQKTGRFATAEE  216 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS----------SSHHHHHHHHHH--TCTTSSCEEHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcc----------cCcHHHHHHHHh--cCCCCCCCCHHH
Confidence            99999999999999999999999999999999999865422110          001112222222  246678899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+++.+.+++|++|.+|||++.
T Consensus       217 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          217 IAMLCVYLASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99999999999999999999999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.2e-45  Score=316.67  Aligned_cols=246  Identities=24%  Similarity=0.272  Sum_probs=210.3

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ..+..++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..      ..++.++++|++|.++++++++++
T Consensus         8 ~~m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A            8 QQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             -------CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHH
Confidence            34555689999999999999999999999999999999999877654321      236889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..
T Consensus        82 ~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~  157 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLL----GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHA  157 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCC----CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHCCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCc
Confidence            9999999999999998654    678889999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|++||+|+++|+++++.|++++||+||+|+||+|+|++.......            ...+.    ......+.+++++
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------------~~~~~----~~~~~~~~~r~~~  221 (266)
T 3p19_A          158 AYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ------------QIKDG----YDAWRVDMGGVLA  221 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH------------HHHHH----HHHHHHHTTCCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccch------------hhhHH----HHhhcccccCCCC
Confidence            9999999999999999999999999999999999999997653211            11111    1112246788999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+|++++||+++...+++++.+....+...
T Consensus       222 pedvA~av~~l~~~~~~~~~~~i~i~p~~~~~  253 (266)
T 3p19_A          222 ADDVARAVLFAYQQPQNVCIREIALAPTKQQP  253 (266)
T ss_dssp             HHHHHHHHHHHHHSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHHHHHHcCCCCccceeeEEecCCCCC
Confidence            99999999999999999999999988877654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=4.1e-45  Score=315.63  Aligned_cols=247  Identities=30%  Similarity=0.430  Sum_probs=212.2

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|.++++++++++ +
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            456899999999999999999999999999999999999999988888877   567999999999999999999998 8


Q ss_pred             HcCCccEEEEC-CCCCCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC------CCCceEEEEccccccc
Q 040531           89 KHGRLDILFNN-AGVLGNQS-KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP------RRSGCIISTASVASLM  160 (285)
Q Consensus        89 ~~~~id~lv~~-ag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~g~ii~vss~~~~~  160 (285)
                      +++++|++||| ||+..... ......+.+.++|++.+++|+.+++.+++.+++.|.+      ++.|+||++||..+..
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            88999999999 55432210 0011246789999999999999999999999999976      5678999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......                +........  .+
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------------~~~~~~~~~--~~  241 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE----------------EALAKFAAN--IP  241 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH----------------HHHHHHHHT--CC
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH----------------HHHHHHHhc--CC
Confidence            999999999999999999999999999999999999999999999765321                122222222  34


Q ss_pred             c-CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          241 K-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       241 ~-~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      . +++.+|||+|++++||+++  .+++|++|.+|||++++
T Consensus       242 ~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          242 FPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             SSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             CCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            4 7889999999999999975  69999999999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.7e-46  Score=318.29  Aligned_cols=241  Identities=28%  Similarity=0.440  Sum_probs=198.9

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +...++++++|++|||||++|||++++++|+++|++|++++|+.+.++           ++.++++|++|.+++++++++
T Consensus        12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~   80 (253)
T 2nm0_A           12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKE   80 (253)
T ss_dssp             --------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHH
Confidence            344556789999999999999999999999999999999999865432           278899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++.
T Consensus        81 ~~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  156 (253)
T 2nm0_A           81 IEETHGPVEVLIANAGVTKD----QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQ  156 (253)
T ss_dssp             HHHHTCSCSEEEEECSCCTT----TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCc
Confidence            99999999999999998643    56778899999999999999999999999999987778999999999888877778


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|++.|++.++.|++++||+||+|+||+|+|++......                +.......  ..+.++..
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----------------~~~~~~~~--~~p~~~~~  218 (253)
T 2nm0_A          157 ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD----------------EQRANIVS--QVPLGRYA  218 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------------------CHHHHHT--TCTTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH----------------HHHHHHHh--cCCCCCCc
Confidence            8999999999999999999999999999999999999998643210                00111111  24667889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|+|+.++||+++.+.+++|++|.+|||+++.
T Consensus       219 ~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          219 RPEEIAATVRFLASDDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCC
T ss_pred             CHHHHHHHHHHHhCccccCCcCcEEEECCccccC
Confidence            9999999999999999999999999999998753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=9.8e-45  Score=309.45  Aligned_cols=253  Identities=26%  Similarity=0.402  Sum_probs=219.6

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999988888777776666789999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC--
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--  165 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~--  165 (285)
                      +.++++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++++.|.|++++.++||++||..+..+.++.  
T Consensus        86 ~~~~~id~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (260)
T 3awd_A           86 EQEGRVDILVACAGICIS---EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ  162 (260)
T ss_dssp             HHHSCCCEEEECCCCCCC---SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCC
T ss_pred             HHcCCCCEEEECCCCCCC---CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCc
Confidence            999999999999998642   156778899999999999999999999999999987778999999999888777766  


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|++++.+++.++.|++++||++++|+||+++|++.......           .   +.......  ..+.+++.
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~  226 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK-----------P---ELYDAWIA--GTPMGRVG  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC-----------H---HHHHHHHH--TCTTSSCB
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC-----------h---HHHHHHHh--cCCcCCCC
Confidence            89999999999999999999999999999999999999987521110           0   11122222  23567789


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|+|+++++|+++.+.+++|+.+.+|||++.+
T Consensus       227 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  260 (260)
T 3awd_A          227 QPDEVASVVQFLASDAASLMTGAIVNVDAGFTVW  260 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred             CHHHHHHHHHHHhCchhccCCCcEEEECCceecC
Confidence            9999999999999998899999999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-45  Score=313.33  Aligned_cols=244  Identities=30%  Similarity=0.480  Sum_probs=196.6

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +.....++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+   ..++.++.+|+++.+++++++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh
Confidence            445566889999999999999999999999999999999999999988887776   35788999999999998887654


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                          .+++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus        82 ----~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  153 (249)
T 3f9i_A           82 ----TSNLDILVCNAGITSD----TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ  153 (249)
T ss_dssp             ----CSCCSEEEECCC-----------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS
T ss_pred             ----cCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC
Confidence                4789999999998654    45667888999999999999999999999999988888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++......             .   .......  ..+.+++.
T Consensus       154 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~---~~~~~~~--~~~~~~~~  215 (249)
T 3f9i_A          154 ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE-------------K---QREAIVQ--KIPLGTYG  215 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH-------------H---HHHHHHH--HCTTCSCB
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH-------------H---HHHHHHh--cCCCCCCc
Confidence            9999999999999999999999999999999999999998754311             1   1112222  24678889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+|++++||+++.+.+++|++|.+|||+++
T Consensus       216 ~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          216 IPEDVAYAVAFLASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEEECCCEee
Confidence            999999999999999999999999999999975

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.2e-44  Score=307.24  Aligned_cols=239  Identities=27%  Similarity=0.372  Sum_probs=208.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35889999999999999999999999999999999999998888888886666789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++
T Consensus        83 g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  157 (247)
T 2jah_A           83 GGLDILVNNAGIMLL----GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQA  157 (247)
T ss_dssp             SCCSEEEECCCCCCC----CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHH
Confidence            999999999998643    5778899999999999999999999999999998766 99999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC--CCHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT--LKAR  248 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e  248 (285)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......            ..    .......  .+ +++  .+||
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~~----~~~~~~~--~~-~~~~~~~pe  218 (247)
T 2jah_A          158 TKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH------------TA----TKEMYEQ--RI-SQIRKLQAQ  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC------------HH----HHHHHHH--HT-TTSCCBCHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc------------hh----hHHHHHh--cc-cccCCCCHH
Confidence            99999999999999999999999999999999998653211            11    1111111  12 444  8999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecC
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      |+|+.++||+++.+.+++++. .+++
T Consensus       219 dvA~~v~~l~s~~~~~~~~~i-~i~~  243 (247)
T 2jah_A          219 DIAEAVRYAVTAPHHATVHEI-FIRP  243 (247)
T ss_dssp             HHHHHHHHHHHSCTTEEEEEE-EEEE
T ss_pred             HHHHHHHHHhCCCccCccceE-EecC
Confidence            999999999999888888774 5554

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=7.7e-45  Score=306.80  Aligned_cols=235  Identities=31%  Similarity=0.429  Sum_probs=204.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   ..+++   +  +.++++|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999999876   23333   2  7889999999 999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--CCCccchhhH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--LGPHAYTVSK  172 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--~~~~~Y~asK  172 (285)
                      +||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.  ++...|++||
T Consensus        73 ~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK  148 (239)
T 2ekp_A           73 VLVHAAAVNVR----KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAK  148 (239)
T ss_dssp             EEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHH
T ss_pred             EEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHH
Confidence            99999998643    56788999999999999999999999999999988778999999999988877  7889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|++.++++++.|++++||+||+|+||+++|++.......              .+.......  ..|.+++.+|+|+|+
T Consensus       149 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~p~~~~~~~~dvA~  212 (239)
T 2ekp_A          149 TALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN--------------PELYEPITA--RIPMGRWARPEEIAR  212 (239)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--------------HHHHHHHHT--TCTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC--------------HHHHHHHHh--cCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999986542100              111112221  246678899999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .++||+++.+++++|+.+.+|||++.
T Consensus       213 ~~~~l~s~~~~~~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          213 VAAVLCGDEAEYLTGQAVAVDGGFLA  238 (239)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHcCchhcCCCCCEEEECCCccc
Confidence            99999999999999999999999864

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.6e-45  Score=313.70  Aligned_cols=242  Identities=21%  Similarity=0.251  Sum_probs=207.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+ +.+.+.++..+     |.++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999888776655 54434555444     567788889999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      ||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+|+
T Consensus        76 lv~nAg~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  152 (254)
T 1zmt_A           76 LVSNDIFAPE---FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA  152 (254)
T ss_dssp             EEEECCCCCC---CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHH
T ss_pred             EEECCCcCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHH
Confidence            9999998622   1577889999999999999999999999999999877789999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCc---------cchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGV---------ATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      ++|+++++.|++++||+||+|+||+|         +|++....              .   +.......  ..+.++..+
T Consensus       153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--------------~---~~~~~~~~--~~p~~~~~~  213 (254)
T 1zmt_A          153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--------------P---EHVAHVKK--VTALQRLGT  213 (254)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--------------H---HHHHHHHH--HSSSSSCBC
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC--------------h---HHHHHHhc--cCCCCCCcC
Confidence            99999999999999999999999999         77664321              1   11111111  246778899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccccccccC
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCVGL  285 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~~~  285 (285)
                      |+|+|+.++||+++.+++++|+.|.+|||++...+|+|+
T Consensus       214 p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~~~~  252 (254)
T 1zmt_A          214 QKELGELVAFLASGSCDYLTGQVFWLAGGFPMIERWPGM  252 (254)
T ss_dssp             HHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCCCCCTTC
T ss_pred             HHHHHHHHHHHhCcccCCccCCEEEECCCchhhccCCCC
Confidence            999999999999999999999999999999999999986

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.9e-45  Score=314.36  Aligned_cols=243  Identities=25%  Similarity=0.282  Sum_probs=193.5

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..|.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            3455789999999999999999999999999999999999999988888777   4678999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccCCCCC
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMGGLGP  165 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~~~~~  165 (285)
                      ++++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++  .|+||++||..+..+.++.
T Consensus        98 ~~~g~iD~lVnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~  174 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPA---IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYS  174 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCS---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTC
T ss_pred             HHcCCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCc
Confidence            9999999999999986432   5788899999999999999999999999999998765  6999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.....             ..+.    .  ...+.+++.
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------------~~~~----~--~~~~~~~~~  235 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-------------VPQA----D--LSIKVEPVM  235 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-------------chhh----h--hcccccCCC
Confidence            99999999999999999999999999999999999999987653221             0000    0  013456678


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +|+|+|++++||++.......++......+
T Consensus       236 ~pedvA~~v~fL~s~~~~~~~~~i~i~~~~  265 (272)
T 4dyv_A          236 DVAHVASAVVYMASLPLDANVQFMTIMATK  265 (272)
T ss_dssp             CHHHHHHHHHHHHHSCTTSCCCEEEEEEC-
T ss_pred             CHHHHHHHHHHHhCCCCcCccceEEEeccC
Confidence            999999999999997666555554444443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2e-45  Score=311.33  Aligned_cols=241  Identities=29%  Similarity=0.422  Sum_probs=202.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVK-HGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .++|++|||||++|||++++++|++ .|+.|++++|+.+.          ...++.++++|++|.++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            4689999999999999999999999 78999999987652          12457899999999999999996543  77


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|+++  |+||++||..+..+.++...|++|
T Consensus        70 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~as  143 (244)
T 4e4y_A           70 SFDGIFLNAGILIK----GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLS  143 (244)
T ss_dssp             CEEEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHH
T ss_pred             CCCEEEECCccCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHH
Confidence            99999999998654    578889999999999999999999999999999654  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+++++.|++++||+||+|+||+|+|++.............     ....+.......  ..|.+++.+|+|+|
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~p~~r~~~p~dvA  216 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVG-----ISFDEAQKQEEK--EFPLNRIAQPQEIA  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHT-----CCHHHHHHHHHT--TSTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcC-----CCHHHHHHHHhh--cCCCCCCcCHHHHH
Confidence            99999999999999999999999999999999998754322000000     000111122222  35778899999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+++.+.++||++|.+|||+++
T Consensus       217 ~~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          217 ELVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhcCccccccCCeEeECCCccC
Confidence            999999999999999999999999975

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=3.8e-45  Score=313.20  Aligned_cols=252  Identities=27%  Similarity=0.396  Sum_probs=198.4

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|+++.++++++++++.+
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999999888888877766667899999999999999999999999


Q ss_pred             Hc-CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           89 KH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .+ +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...
T Consensus        88 ~~~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  163 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRS----KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSI  163 (266)
T ss_dssp             HHTTCCSEEEEECCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCH
T ss_pred             HhCCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCch
Confidence            98 899999999998643    5677889999999999999999999999999998777899999999998888888899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|++++.++++++.|++++||++++|+||++.|++.......               +.......  ..+.+++.+|
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~  226 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD---------------EFKKVVIS--RKPLGRFGEP  226 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCG
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH---------------HHHHHHHh--cCCCCCCcCH
Confidence            999999999999999999999999999999999999986543210               00011111  1355678899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|+|++++||+++.+.+++|+.|.+|||++....
T Consensus       227 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~~~~  260 (266)
T 1xq1_A          227 EEVSSLVAFLCMPAASYITGQTICVDGGLTVNGF  260 (266)
T ss_dssp             GGGHHHHHHHTSGGGTTCCSCEEECCCCEEETTE
T ss_pred             HHHHHHHHHHcCccccCccCcEEEEcCCcccccc
Confidence            9999999999999899999999999999987643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1e-44  Score=313.79  Aligned_cols=250  Identities=29%  Similarity=0.443  Sum_probs=216.8

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ...++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++|.++++++++++
T Consensus        36 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           36 ENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHH
Confidence            34456789999999999999999999999999999999999988888888877666778999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++..
T Consensus       116 ~~~~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  191 (285)
T 2c07_A          116 LTEHKNVDILVNNAGITRD----NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQA  191 (285)
T ss_dssp             HHHCSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCH
T ss_pred             HHhcCCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCc
Confidence            9999999999999998643    567788999999999999999999999999999877789999999999988888999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|++.++++++.|+++.||++++|+||+++|++.....             .   +.......  ..+.+++.+
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~---~~~~~~~~--~~~~~~~~~  253 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-------------E---QIKKNIIS--NIPAGRMGT  253 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-------------H---HHHHHHHT--TCTTSSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-------------H---HHHHHHHh--hCCCCCCCC
Confidence            99999999999999999999999999999999999999864321             0   11111111  235677899


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+|+++++|+++.+.+++|+.|.+|||+++
T Consensus       254 ~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~~~  285 (285)
T 2c07_A          254 PEEVANLACFLSSDKSGYINGRVFVIDGGLSP  285 (285)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHHhCCCcCCCCCCEEEeCCCccC
Confidence            99999999999999999999999999999863

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.3e-44  Score=306.17  Aligned_cols=246  Identities=29%  Similarity=0.406  Sum_probs=214.3

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCce-EEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLV-TYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++ .++++|++|.++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            556789999999999999999999999999999999999988887777666   3456 889999999999999999998


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC--
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--  165 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~--  165 (285)
                      + ++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+..  
T Consensus        82 ~-~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  156 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIARL----HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFA  156 (254)
T ss_dssp             H-HSCCCEEEECCCCCCC----BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCB
T ss_pred             h-hCCCcEEEECCccCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcc
Confidence            8 8999999999998643    56778899999999999999999999999999988778999999999888777777  


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|++.++++++.|++++||++++|+||+++|++.......              .+.......  ..+.++..
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~~~  220 (254)
T 2wsb_A          157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER--------------PELFETWLD--MTPMGRCG  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC--------------HHHHHHHHH--TSTTSSCB
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC--------------hHHHHHHHh--cCCCCCCC
Confidence            89999999999999999999999999999999999999987643210              111122222  23567789


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+|+++++|+++.+.+++|+.+.+|||++.
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          221 EPSEIAAAALFLASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEECCCEec
Confidence            999999999999999889999999999999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.4e-44  Score=307.78  Aligned_cols=259  Identities=48%  Similarity=0.818  Sum_probs=218.5

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +..+.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++++|++|.+++++++++
T Consensus         7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A            7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHH
Confidence            45566779999999999999999999999999999999999998887777666632 23789999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-C
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-G  164 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-~  164 (285)
                      +.+.++++|+||||||....  ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+ +
T Consensus        86 ~~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  163 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLST--TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV  163 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCS--SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS
T ss_pred             HHHHcCCCCEEEECCcccCC--CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCC
Confidence            99999999999999998642  12467788999999999999999999999999999887889999999999888777 7


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|+++|++++.+++.++.|++++||++++|+||+++|++.......             ..+...........+.+++
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~  230 (278)
T 2bgk_A          164 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-------------DSSRVEELAHQAANLKGTL  230 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-------------CHHHHHHHHHHTCSSCSCC
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-------------chhHHHHhhhccccccccc
Confidence            789999999999999999999999999999999999999986543211             0111222222223355778


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      .+|+|+|+++++|+++.+.+++|+.+.+|||+..+.
T Consensus       231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (278)
T 2bgk_A          231 LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTN  266 (278)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCHHHHHHHHHHHcCcccccCCCCEEEECCcccccC
Confidence            999999999999999988999999999999987653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.8e-45  Score=314.29  Aligned_cols=244  Identities=27%  Similarity=0.303  Sum_probs=201.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCc-eEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.+ +.++++|++|.++++++++++.++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999988888887654444 589999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccCCCCCcc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~~~~~~~  167 (285)
                      ++++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++++  .|+||++||..+..+.++...
T Consensus       109 ~g~iD~lvnnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  185 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPP---VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAP  185 (281)
T ss_dssp             HSCCSEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             cCCCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChh
Confidence            99999999999986432   5788899999999999999999999999999998765  699999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++...........                   ....+.++..+|
T Consensus       186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-------------------~~~~~~~~~~~p  246 (281)
T 4dry_A          186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA-------------------NGEVAAEPTIPI  246 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT-------------------TSCEEECCCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh-------------------hhcccccCCCCH
Confidence            9999999999999999999999999999999999999976543221000                   002345678899


Q ss_pred             HHHHHHHHHHhcCCC-CcccccEEEecCCc
Q 040531          248 RDIAEAALYLASDES-KYISGHNLVVDGGF  276 (285)
Q Consensus       248 eeva~~~~~l~s~~~-~~~~G~~i~vdgG~  276 (285)
                      ||+|++++||++... ..+++.++......
T Consensus       247 edvA~~v~fL~s~~~~~~i~~~~i~p~~~~  276 (281)
T 4dry_A          247 EHIAEAVVYMASLPLSANVLTMTVMATRMP  276 (281)
T ss_dssp             HHHHHHHHHHHHSCTTEEEEEEEEEETTSS
T ss_pred             HHHHHHHHHHhCCCccCccccEEEEecccc
Confidence            999999999998654 45565555555443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=8.1e-46  Score=327.02  Aligned_cols=261  Identities=22%  Similarity=0.256  Sum_probs=206.6

Q ss_pred             CCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCc---------hhhHHHHHHhhcC---CCceEEEeccCCCH--H
Q 040531           14 EGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDD---------AAGIALADSLLSS---SPLVTYLHCDVSLE--Q   77 (285)
Q Consensus        14 ~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~---------~~~~~~~~~~~~~---~~~v~~~~~D~s~~--~   77 (285)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         +.++.....+...   ...+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999877655         2222222222221   23478899999988  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHH
Q 040531           78 ------------------DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAA  139 (285)
Q Consensus        78 ------------------~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (285)
                                        +++++++++.+.++++|+||||||+...  ...++.+.+.++|++++++|+.+++.++++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  158 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE--VQKDLLNTSRKGYLDALSKSSYSLISLCKYFV  158 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccccc--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence                              9999999999999999999999997421  12678899999999999999999999999999


Q ss_pred             HhhcCCCCceEEEEcccccccCCCCCc-cchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhhccccc--
Q 040531          140 KVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAWKSCED--  215 (285)
Q Consensus       140 ~~~~~~~~g~ii~vss~~~~~~~~~~~-~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~~~~~~--  215 (285)
                      |.|+++  |+||++||..+..+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|........+.  
T Consensus       159 p~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  236 (329)
T 3lt0_A          159 NIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE  236 (329)
T ss_dssp             GGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-------
T ss_pred             HHHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccc
Confidence            999764  9999999999999999886 9999999999999999999998 899999999999999998765321000  


Q ss_pred             ----------------cc-CCCCCc---------hHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccE
Q 040531          216 ----------------CM-DSGKPC---------EEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHN  269 (285)
Q Consensus       216 ----------------~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~  269 (285)
                                      .. ......         ....+.+.+.... ..|.+++.+|||+|++++||+|+.++|+||++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~peevA~~v~fL~s~~a~~itG~~  315 (329)
T 3lt0_A          237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEK-YAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHH-HSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             ccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhh-cCcccCcCCHHHHHHHHHHHhCchhccccCcE
Confidence                            00 000000         0000111111111 35788999999999999999999999999999


Q ss_pred             EEecCCcccc
Q 040531          270 LVVDGGFTTS  279 (285)
Q Consensus       270 i~vdgG~~~~  279 (285)
                      |.+|||+++.
T Consensus       316 i~vdGG~~~~  325 (329)
T 3lt0_A          316 IYVDNGLNIM  325 (329)
T ss_dssp             EEESTTGGGC
T ss_pred             EEEcCCeeEE
Confidence            9999999974

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.2e-44  Score=304.56  Aligned_cols=247  Identities=31%  Similarity=0.466  Sum_probs=213.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh-hcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL-LSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ .+.+.++.++++|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998888777776 3445678999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |+||||||..... ....+.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+
T Consensus        82 d~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           82 DVLVNNAGITGNS-EAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CEEEECCCCCCCT-TCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCC-CcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence            9999999986431 112277889999999999999999999999999998777899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++.++++++.|++++||++++++||+++|++.......           .   +.......  ..+.+++.+|+|+|++
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~~~~dva~~  224 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ-----------P---ELRDQVLA--RIPQKEIGTAAQVADA  224 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS-----------H---HHHHHHHT--TCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC-----------H---HHHHHHHh--cCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999986542111           0   11111222  2466788899999999


Q ss_pred             HHHHhcCCCCcccccEEEecCCccc
Q 040531          254 ALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       254 ~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++|+++.+.+++|+.|.+|||++.
T Consensus       225 ~~~l~~~~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          225 VMFLAGEDATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HHHHcCchhhcccCCEEEECCceec
Confidence            9999999999999999999999864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=6.2e-44  Score=302.94  Aligned_cols=246  Identities=31%  Similarity=0.464  Sum_probs=214.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++++|++|.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999999999988887777766432 678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-ceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.++...|+
T Consensus        81 ~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  156 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN  156 (251)
T ss_dssp             SSCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccch
Confidence            999999999998643    56778899999999999999999999999999987766 8999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          170 VSKHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ++|++++.++++++.|+.  ++||++++|+||+++|++..... .               +...... ....+.+++.+|
T Consensus       157 ~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~---------------~~~~~~~-~~~~~~~~~~~~  219 (251)
T 1zk4_A          157 ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-G---------------AEEAMSQ-RTKTPMGHIGEP  219 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-T---------------HHHHHTS-TTTCTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-c---------------hhhhHHH-hhcCCCCCCcCH
Confidence            999999999999999988  88999999999999999875421 0               0011101 112356778899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+++++|+++.+.+++|+.+.+|||++.
T Consensus       220 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          220 NDIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCcccccccCcEEEECCCccC
Confidence            9999999999999889999999999999874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-44  Score=304.83  Aligned_cols=225  Identities=17%  Similarity=0.174  Sum_probs=192.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++++|++|.++++++++++.+.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999999999999999888887773   36899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++||
T Consensus        78 id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asK  152 (235)
T 3l6e_A           78 PELVLHCAGTGEF----GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASK  152 (235)
T ss_dssp             CSEEEEECCCC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHH
T ss_pred             CcEEEECCCCCCC----CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHH
Confidence            9999999998543    6788899999999999999999999999999997654 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+++|+++++.|++++||+||+|+||+|+|++......                           .+..++.+|||+|+
T Consensus       153 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------------------------~~~~~~~~pedvA~  205 (235)
T 3l6e_A          153 WGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---------------------------VDPSGFMTPEDAAA  205 (235)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---------------------------CCCcCCCCHHHHHH
Confidence            999999999999999999999999999999998653211                           12345789999999


Q ss_pred             HHHHHhc-CCCCcccccEEEe
Q 040531          253 AALYLAS-DESKYISGHNLVV  272 (285)
Q Consensus       253 ~~~~l~s-~~~~~~~G~~i~v  272 (285)
                      .++||++ +.+.+++|-.+.-
T Consensus       206 ~v~~l~~~~~~~~i~~i~~~~  226 (235)
T 3l6e_A          206 YMLDALEARSSCHVTDLFIGR  226 (235)
T ss_dssp             HHHHHTCCCSSEEEEEEEEEE
T ss_pred             HHHHHHhCCCCcceeeEEEec
Confidence            9999998 5677888766553

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.3e-44  Score=306.46  Aligned_cols=246  Identities=20%  Similarity=0.223  Sum_probs=208.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHH---CCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVK---HGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~---~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .+|++|++|||||++|||++++++|++   +|++|++++|+.+.+++..+++.+.  +.++.++++|++|.+++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999999   8999999999999888888877553  45789999999999999999999


Q ss_pred             HHH--HcCCcc--EEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC--CCceEEEEccccc
Q 040531           86 TIS--KHGRLD--ILFNNAGVLGNQSKHKSITD-FDANEFDNIIRINVRGAALGMKYAAKVMVPR--RSGCIISTASVAS  158 (285)
Q Consensus        86 i~~--~~~~id--~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~ii~vss~~~  158 (285)
                      +.+  .++++|  +||||||+....  ..++.+ .+.++|++.+++|+.+++.++++++|.|+++  +.|+||++||..+
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDV--SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCC--SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHhccccccCCccEEEECCcccCCC--CcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh
Confidence            988  678899  999999985321  135666 6899999999999999999999999999876  6799999999999


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          159 LMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       159 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                      ..+.++...|++||+|+++|+++++.|+++  |+||+|+||+|+|++........        ...   +.......  .
T Consensus       160 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~--------~~~---~~~~~~~~--~  224 (259)
T 1oaa_A          160 LQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETS--------KDP---ELRSKLQK--L  224 (259)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHC--------SCH---HHHHHHHH--H
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhcc--------CCh---hHHHHHHH--h
Confidence            999999999999999999999999999974  99999999999999976532110        001   11111111  2


Q ss_pred             cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       239 ~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      .|.++..+|||+|+.++||+++ ++|+||++|.+||
T Consensus       225 ~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          225 KSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             hhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence            3567889999999999999986 6899999999996

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=9e-44  Score=302.54  Aligned_cols=249  Identities=32%  Similarity=0.428  Sum_probs=218.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999998888887777666778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....    .++ +.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        86 ~~~~d~vi~~Ag~~~~----~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  160 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGP----KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HSSCCEEEECCCCCCC----CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCC----CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccH
Confidence            9999999999998643    344 67899999999999999999999999999877789999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.+++.++.|++++||++++++||.+.|++.......               +.......  ..+.+++.+|+|
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~d  223 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---------------EIEQKMLQ--HTPIRRLGQPQD  223 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---------------HHHHHHHH--TCSSCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh---------------HHHHHHHh--cCCcccCCCHHH
Confidence            9999999999999999999999999999999999986542111               11112222  246678899999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|+++++|+++.+.+++|+.+++|||...+-
T Consensus       224 va~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          224 IANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            9999999999988899999999999987653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.8e-44  Score=305.61  Aligned_cols=245  Identities=30%  Similarity=0.463  Sum_probs=194.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+|++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+.+.+.+.++.++++|++|.++++++++++.+.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999998 67777777777777666678999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        81 ~~~~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  156 (247)
T 2hq1_A           81 FGRIDILVNNAGITRD----TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYA  156 (247)
T ss_dssp             HSCCCEEEECC-------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHH
T ss_pred             cCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhH
Confidence            9999999999998643    456778889999999999999999999999999877789999999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|++.++++++.|++++||++|+++||++.|++.....             .   +.......  ..+.+++.+|+|
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~---~~~~~~~~--~~~~~~~~~~~d  218 (247)
T 2hq1_A          157 ASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP-------------D---KVKEMYLN--NIPLKRFGTPEE  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-------------H---HHHHHHHT--TSTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc-------------h---HHHHHHHh--hCCCCCCCCHHH
Confidence            99999999999999999999999999999999999865321             0   11111111  235677889999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +|+++++|+++.+.+++|+.+++|||++
T Consensus       219 va~~~~~l~~~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          219 VANVVGFLASDDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             HHHHHHHHcCcccccccCcEEEeCCCcc
Confidence            9999999999988999999999999986

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-44  Score=307.72  Aligned_cols=250  Identities=28%  Similarity=0.438  Sum_probs=209.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-------CceEEEeccCCCHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-------PLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~D~s~~~~i~~~   82 (285)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+       .++.++++|++|.++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            456899999999999999999999999999999999999988887777665433       5788999999999999999


Q ss_pred             HHHHHHHcCCc-cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEccccccc
Q 040531           83 INVTISKHGRL-DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLM  160 (285)
Q Consensus        83 ~~~i~~~~~~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~  160 (285)
                      ++.+.+.++++ |+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQD----EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCC----cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence            99999999999 999999998643    5677889999999999999999999999999998766 78999999998888


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      +.++...|+++|+|++.+++.++.|++++||++++|+||++.|++.....+                +.......  ..+
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----------------~~~~~~~~--~~~  219 (264)
T 2pd6_A          158 GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ----------------KVVDKITE--MIP  219 (264)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------------------CTGG--GCT
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH----------------HHHHHHHH--hCC
Confidence            889999999999999999999999999999999999999999998643211                00001111  135


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      .+++.+|+|+|+++++++++.+.+++|+.+.+|||+++..+
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  260 (264)
T 2pd6_A          220 MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN  260 (264)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-----
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccc
Confidence            56788999999999999999889999999999999987654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=6.7e-44  Score=302.10  Aligned_cols=246  Identities=26%  Similarity=0.414  Sum_probs=214.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999998888777766644 356789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus        82 ~~~~~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  157 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRD----KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNY  157 (248)
T ss_dssp             HSSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             hcCCCCEEEECCCCCCC----CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchH
Confidence            99999999999998643    56778899999999999999999999999999987778999999999888888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|++++.+++.++.|++++||++++++||+++|++.... .            ..   .......  ..+.+++.+|+
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~------------~~---~~~~~~~--~~~~~~~~~~~  219 (248)
T 2pnf_A          158 STTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-S------------EE---IKQKYKE--QIPLGRFGSPE  219 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-C------------HH---HHHHHHH--TCTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-c------------HH---HHHHHHh--cCCCCCccCHH
Confidence            99999999999999999999999999999999999986532 1            01   1111111  23567788999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+|+++++++++.+.+++|+.+.+|||++
T Consensus       220 dva~~~~~l~~~~~~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          220 EVANVVLFLCSELASYITGEVIHVNGGMF  248 (248)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCchhhcCCCcEEEeCCCcC
Confidence            99999999999888899999999999974

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=5.9e-44  Score=307.94  Aligned_cols=249  Identities=25%  Similarity=0.332  Sum_probs=213.2

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..++++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.+.+.++.++++|++|.++++++++++.
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence            34457899999999999999999999999999999999999887777666665446678999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCC-CCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--CCC
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSIT-DFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--GLG  164 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--~~~  164 (285)
                      +.++++|+||||||.....   .++. +.+.++|++.+++|+.+++.+++.+++.|++++.++||++||..+..+  .++
T Consensus       107 ~~~g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  183 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTWTQ---GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQL  183 (279)
T ss_dssp             HHHSCCSEEEECGGGSTTC-----CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CC
T ss_pred             HHhCCCCEEEECCcccccC---CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCC
Confidence            9999999999999986431   3455 778899999999999999999999999998777899999999988877  677


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|+++|+|++.++++++.|+++++ +||+|+||+++|++.... .            ..   ....+..  ..+.+++
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~------------~~---~~~~~~~--~~p~~~~  244 (279)
T 3ctm_A          184 QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-S------------KD---MKAKWWQ--LTPLGRE  244 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-C------------HH---HHHHHHH--HSTTCSC
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-C------------hH---HHHHHHH--hCCccCC
Confidence            88999999999999999999999999 999999999999986321 0            11   1111111  2466788


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+|+|+|+.++||+++.+.+++|++|.+|||+++
T Consensus       245 ~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          245 GLTQELVGGYLYLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             BCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            9999999999999999999999999999999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=3.9e-44  Score=299.44  Aligned_cols=223  Identities=24%  Similarity=0.267  Sum_probs=190.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ||++++|++|||||++|||++++++|+++|++|++++|+.+                    +|++|.++++++++++   
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh---
Confidence            56789999999999999999999999999999999998765                    8999999999887654   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                       +++|+||||||.....   .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+
T Consensus        58 -g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~  131 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPA---GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKA  131 (223)
T ss_dssp             -CSEEEEEECCCCCCCC---SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHH
T ss_pred             -CCCCEEEECCCCCCCC---CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHH
Confidence             8999999999986332   67888999999999999999999999999999964  58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++|+++++.|+++  |+||+|+||+++|++.......            ...+.......  ..|.+++.+|+|
T Consensus       132 asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~d  195 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNAD------------DRDAMYQRTQS--HLPVGKVGEASD  195 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHH------------HHHHHHHHHHH--HSTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchh------------hHHHHHHHHhh--cCCCCCccCHHH
Confidence            9999999999999999998  9999999999999987643211            11122222222  357788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||++  +.+++|++|.+|||++++
T Consensus       196 vA~~~~~l~~--~~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          196 IAMAYLFAIQ--NSYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             HHHHHHHHHH--CTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHcc--CCCCCCcEEEecCCeecC
Confidence            9999999997  479999999999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.1e-43  Score=303.69  Aligned_cols=244  Identities=29%  Similarity=0.420  Sum_probs=207.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..|++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999988887777666   56789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCC------CCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC------CCceEEEEccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSIT------DFDANEFDNIIRINVRGAALGMKYAAKVMVPR------RSGCIISTASV  156 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~ii~vss~  156 (285)
                      .++++|+||||||....    .++.      +.+.++|++.+++|+.+++.++++++|.|+++      +.++||++||.
T Consensus        83 ~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           83 KFGRVDVAVNCAGIAVA----SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHSCCCEEEECCCCCCC----CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HCCCCCEEEECCccCCC----CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            99999999999998643    2222      47899999999999999999999999999877      67999999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          157 ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       157 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .+..+.++...|+++|+|++.+++.++.|++++||+||+|+||+++|++......                +....... 
T Consensus       159 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----------------~~~~~~~~-  221 (265)
T 2o23_A          159 AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE----------------KVCNFLAS-  221 (265)
T ss_dssp             HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------------CHHHH-
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH----------------HHHHHHHH-
Confidence            9988888999999999999999999999999999999999999999998653211                00011111 


Q ss_pred             hhccc-CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          237 LANLK-GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       237 ~~~~~-~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                       ..+. +++.+|+|+|+.++||++  +.+++|+.|.+|||+++.
T Consensus       222 -~~~~~~~~~~~~dva~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          222 -QVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             -TCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             -cCCCcCCCCCHHHHHHHHHHHhh--cCccCceEEEECCCEecC
Confidence             1344 778899999999999995  478999999999999865

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-44  Score=305.32  Aligned_cols=249  Identities=27%  Similarity=0.318  Sum_probs=212.2

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+.++|++|++|||||++|||++++++|+++|++|++++|+.+...+..+++.+ .+.++.++++|++|.++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999987766655555533 2567899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCC-
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLG-  164 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~-  164 (285)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+. 
T Consensus        87 ~~~~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  162 (265)
T 1h5q_A           87 DADLGPISGLIANAGVSVV----KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS  162 (265)
T ss_dssp             HHHSCSEEEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE
T ss_pred             HHhcCCCCEEEECCCcCCC----CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc
Confidence            9999999999999998643    5677889999999999999999999999999997655 489999999887665432 


Q ss_pred             ------CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          165 ------PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       165 ------~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                            ...|+++|+|++.+++.++.|++++||++++|+||+|+|++.....+             .   .......  .
T Consensus       163 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~---~~~~~~~--~  224 (265)
T 1h5q_A          163 LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK-------------K---IRDHQAS--N  224 (265)
T ss_dssp             TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-------------H---HHHHHHH--T
T ss_pred             ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch-------------h---HHHHHHh--c
Confidence                  67899999999999999999999999999999999999998754211             1   1111111  2


Q ss_pred             cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+.+++.+|+|+|++++||+++.+.+++|+.|.+|||++.
T Consensus       225 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          225 IPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             CTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             CcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            4567788999999999999999999999999999999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8.4e-44  Score=300.91  Aligned_cols=241  Identities=28%  Similarity=0.469  Sum_probs=211.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ||++|||||++|||++++++|+++|++|+++ +|+.+..++..+++.+.+.++.++++|++|.++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999984 788888777777766556788999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+
T Consensus        81 d~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (244)
T 1edo_A           81 DVVVNNAGITRD----TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKA  156 (244)
T ss_dssp             SEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCC----cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHH
Confidence            999999998643    5677889999999999999999999999999998777899999999988888889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEA  253 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~  253 (285)
                      +++.+++.++.|++++||++++++||+++|++.....+                +.......  ..+.+++.+|+|+|++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~dva~~  218 (244)
T 1edo_A          157 GVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE----------------DMEKKILG--TIPLGRTGQPENVAGL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH----------------HHHHHHHT--SCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh----------------HHHHHHhh--cCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999998754211                11111111  2356778899999999


Q ss_pred             HHHHh-cCCCCcccccEEEecCCcc
Q 040531          254 ALYLA-SDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       254 ~~~l~-s~~~~~~~G~~i~vdgG~~  277 (285)
                      ++||+ ++.+.+++|+.+.+|||++
T Consensus       219 ~~~l~~~~~~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          219 VEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHhCCCccCCcCCCEEEeCCCcc
Confidence            99999 7788899999999999986

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2e-44  Score=305.19  Aligned_cols=237  Identities=18%  Similarity=0.156  Sum_probs=200.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE-e--cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIA-D--IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.+.+++..+++  .+       +|+.|.++++++++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9988887776655  11       233377788889999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+.... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        72 ~iD~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPM-NRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA  150 (244)
T ss_dssp             CEEEEEECCCCCTTG-GGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred             CCCEEEECCCcCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence            999999999975320 0046778899999999999999999999999999988888999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh---hhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSML---VNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      |+|+++|+++++.|++++||+||+|+||+|+|++.   ......               +....... ...|.++..+||
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---------------~~~~~~~~-~~~p~~r~~~pe  214 (244)
T 1zmo_A          151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN---------------PELRERVD-RDVPLGRLGRPD  214 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC---------------HHHHHHHH-HHCTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch---------------HHHHHHHh-cCCCCCCCcCHH
Confidence            99999999999999999999999999999999986   432110               11111111 024678889999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+|+.++||+++.++++||+.|.+|||++
T Consensus       215 ~vA~~v~~l~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          215 EMGALITFLASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HHHHHHHHHHTTTTGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHcCccccCccCCEEEeCCCCC
Confidence            99999999999999999999999999975

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=308.02  Aligned_cols=249  Identities=26%  Similarity=0.306  Sum_probs=201.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-c
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-H   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~   90 (285)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999999888888777655678999999999999999999999886 8


Q ss_pred             CCccEEEECCCCCCC---CCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           91 GRLDILFNNAGVLGN---QSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        91 ~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++|+||||||....   .....++.+.+.++|++.+++|+.+++.+.++++|.|++++.|+||++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            999999999953110   001156778889999999999999999999999999988778999999998887653 4678


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++........           ..  ...........+.++..+|
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~p  227 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE-----------EV--LQDPVLKQFKSAFSSAETT  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------------------CHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc-----------cc--cchhHHHHHHhhhccCCCH
Confidence            9999999999999999999999999999999999999865432110           00  0000000011233445689


Q ss_pred             HHHHHHHHHHhcCCC-CcccccEEEecC
Q 040531          248 RDIAEAALYLASDES-KYISGHNLVVDG  274 (285)
Q Consensus       248 eeva~~~~~l~s~~~-~~~~G~~i~vdg  274 (285)
                      ||+|++++||+++.+ .|+||++|.+|+
T Consensus       228 e~va~~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          228 ELSGKCVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHHHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHHHHHHHHhcCcccccccceeechhh
Confidence            999999999999986 499999999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=6.9e-44  Score=300.05  Aligned_cols=231  Identities=23%  Similarity=0.239  Sum_probs=205.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh-cCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL-SSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+.++.++++|++|.++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999999888888775 34678999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.| ++..+++|+++|..+..+.+....|+++|
T Consensus        81 id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  155 (235)
T 3l77_A           81 VDVVVANAGLGYF----KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSARLIPYGGGYVSTK  155 (235)
T ss_dssp             CSEEEECCCCCCC----CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSSCCTTCHHHHHHH
T ss_pred             CCEEEECCccccc----cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcccCCCcchHHHHH
Confidence            9999999998644    678889999999999999999999999999999 44578999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+++|+++++.+  ..||+||+|+||+|+|++.......                          ....+..+|||+|+
T Consensus       156 aa~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~--------------------------~~~~~~~~p~dva~  207 (235)
T 3l77_A          156 WAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGK--------------------------PKEKGYLKPDEIAE  207 (235)
T ss_dssp             HHHHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCC--------------------------CGGGTCBCHHHHHH
T ss_pred             HHHHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCc--------------------------ccccCCCCHHHHHH
Confidence            9999999999554  6789999999999999997643221                          11125679999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++||+++..++++|+.+..|+|..
T Consensus       208 ~v~~l~~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          208 AVRCLLKLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             HHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred             HHHHHHcCCCCCccceEEEeecccC
Confidence            9999999999999999999999975

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.5e-43  Score=299.51  Aligned_cols=242  Identities=29%  Similarity=0.374  Sum_probs=207.0

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |+|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++    ..+.++++|++|.++++++++    
T Consensus         1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCCCEEEEeCCCHHHHHHHHH----
Confidence            356899999999999999999999999999999999999988777665544    235677999999999888765    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++++.+.|++++ .++||++||..+..+.++...
T Consensus        73 ~~~~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSV  148 (244)
T ss_dssp             TCCCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             HcCCCCEEEECCccCCC----cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCch
Confidence            56789999999998643    5677889999999999999999999999999998766 799999999999888888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|++.+++.++.|++++||++++|+||+++|++....+..           ..   .......  ..+.+++.+|
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----------~~---~~~~~~~--~~~~~~~~~~  212 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-----------PH---KAKTMLN--RIPLGKFAEV  212 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-----------TT---HHHHHHH--TCTTCSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-----------hH---HHHHHHh--hCCCCCCcCH
Confidence            999999999999999999999999999999999999987643211           01   1111122  2466788999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+++++|+++.+.+++|+.|.+|||++.
T Consensus       213 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          213 EHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            9999999999998888999999999999875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=9.4e-44  Score=325.53  Aligned_cols=244  Identities=30%  Similarity=0.399  Sum_probs=206.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh--hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA--GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ....+++|++|||||++|||++++++|+++|++|++++|+...  +.+..+++     .+.+++||++|.++++++++++
T Consensus       207 ~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~  281 (454)
T 3u0b_A          207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHV  281 (454)
T ss_dssp             TTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHH
Confidence            3446799999999999999999999999999999999986432  22222222     3568999999999999999999


Q ss_pred             HHHcCC-ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           87 ISKHGR-LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        87 ~~~~~~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      .+++++ +|+||||||+...    .++.+.+.++|++.+++|+.+++++.+++.+.|.+++.++||++||..+..+.++.
T Consensus       282 ~~~~g~~id~lV~nAGv~~~----~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~  357 (454)
T 3u0b_A          282 TEHHGGKVDILVNNAGITRD----KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ  357 (454)
T ss_dssp             HHHSTTCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC
T ss_pred             HHHcCCCceEEEECCcccCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC
Confidence            999986 9999999998754    67889999999999999999999999999999988889999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+++++|+++++.|++++||+||+|+||+|+|+|.......                 ..+.... ..+.++..
T Consensus       358 ~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~-~~~l~r~g  419 (454)
T 3u0b_A          358 TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA-----------------TREVGRR-LNSLFQGG  419 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---------------------------CHHHHH-SBTTSSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh-----------------hHHHHHh-hccccCCC
Confidence            99999999999999999999999999999999999999997543111                 0011111 24667788


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|+|++++||+++.++|+||++|.+|||+++.
T Consensus       420 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          420 QPVDVAELIAYFASPASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             CHHHHHHHHHHHHCGGGTTCCSCEEEESSSBSCC
T ss_pred             CHHHHHHHHHHHhCCccCCCCCcEEEECCccccc
Confidence            9999999999999999999999999999999764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.3e-44  Score=341.72  Aligned_cols=237  Identities=26%  Similarity=0.439  Sum_probs=204.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---------hhhHHHHHHhhcCCCceEEEeccCCCHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD---------AAGIALADSLLSSSPLVTYLHCDVSLEQDIQ   80 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~   80 (285)
                      .++|++|++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++.+.+.+.   .+|++|.++++
T Consensus         3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHH
Confidence            3568999999999999999999999999999999998765         56667777776555443   36888888899


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc
Q 040531           81 NLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM  160 (285)
Q Consensus        81 ~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~  160 (285)
                      ++++++.+.+|++|+||||||+...    .++.+.+.++|++.+++|+.|++.++|+++|.|++++.|+||++||..+..
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILRD----ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            9999999999999999999998643    578899999999999999999999999999999888889999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      +.++...|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|.....+.                   +..      
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~-------------------~~~------  209 (604)
T 2et6_A          156 GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP-------------------PML------  209 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH-------------------HHH------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh-------------------hhh------
Confidence            999999999999999999999999999999999999998 689886432110                   000      


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                        +..+|||+|+.++||+++. .++||+.|.+|||+....+|
T Consensus       210 --~~~~pe~vA~~v~~L~s~~-~~itG~~~~vdgG~~~~~~~  248 (604)
T 2et6_A          210 --EKLGPEKVAPLVLYLSSAE-NELTGQFFEVAAGFYAQIRW  248 (604)
T ss_dssp             --TTCSHHHHHHHHHHHTSSS-CCCCSCEEEEETTEEEEEEE
T ss_pred             --ccCCHHHHHHHHHHHhCCc-ccCCCCEEEECCCeEEEEEE
Confidence              1258999999999999998 99999999999998765544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=9.3e-44  Score=302.83  Aligned_cols=248  Identities=29%  Similarity=0.424  Sum_probs=214.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+ .+.+++..+++.+.+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999 7888777777766667899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--C---ceEEEEccccccc-CC
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--S---GCIISTASVASLM-GG  162 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~---g~ii~vss~~~~~-~~  162 (285)
                      .++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+++  .   ++||++||..+.. +.
T Consensus        82 ~~g~id~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  158 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVG---RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG  158 (258)
T ss_dssp             HHSSCSEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC
T ss_pred             HcCCCCEEEECCCCcCC---cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC
Confidence            99999999999997322   15677889999999999999999999999999987543  3   8999999998887 77


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      ++...|+++|++++.+++.++.|++++||++++|+||+++|++.....             .   +.......  ..+.+
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~---~~~~~~~~--~~~~~  220 (258)
T 3afn_B          159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT-------------Q---DVRDRISN--GIPMG  220 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC-------------H---HHHHHHHT--TCTTC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC-------------H---HHHHHHhc--cCCCC
Confidence            888999999999999999999999999999999999999999864320             0   11112222  23567


Q ss_pred             CCCCHHHHHHHHHHHhcCCCC-cccccEEEecCCccc
Q 040531          243 VTLKARDIAEAALYLASDESK-YISGHNLVVDGGFTT  278 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~-~~~G~~i~vdgG~~~  278 (285)
                      ++.+|+|+|+++++++++.+. +++|+.+.+|||++.
T Consensus       221 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          221 RFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             SCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSSC
T ss_pred             cCCCHHHHHHHHHHHhCcchhccccCCEEeECCCccC
Confidence            788999999999999988777 899999999999854

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.4e-43  Score=304.73  Aligned_cols=244  Identities=20%  Similarity=0.296  Sum_probs=200.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..+|+ |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. .++.++++|++|.++++++++++.+.
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34577 99999999999999999999999999999999999888887777543 57899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCc-eEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..+.++...|
T Consensus        95 ~g~iD~lvnnAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y  171 (272)
T 2nwq_A           95 FATLRGLINNAGLALG---TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVY  171 (272)
T ss_dssp             GSSCCEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHH
T ss_pred             hCCCCEEEECCCCCCC---CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchH
Confidence            9999999999998532   1567889999999999999999999999999999877778 99999999999888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+++++.|++++||+||+|+||+|+|++.......             ..+......     ......+|+
T Consensus       172 ~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------------~~~~~~~~~-----~~~~~~~pe  233 (272)
T 2nwq_A          172 GGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG-------------DQARYDKTY-----AGAHPIQPE  233 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------------------CCCCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc-------------chHHHHHhh-----ccCCCCCHH
Confidence            99999999999999999999999999999999999986432110             000011111     112246999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+|+.++||+++ ..+++|+.|.+|+|..
T Consensus       234 dvA~~v~~l~s~-~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          234 DIAETIFWIMNQ-PAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             HHHHHHHHHHTS-CTTEEEEEEEEEETTE
T ss_pred             HHHHHHHHHhCC-CccCccceEEEeeccC
Confidence            999999999997 5689999999999854

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.1e-44  Score=338.32  Aligned_cols=233  Identities=29%  Similarity=0.487  Sum_probs=200.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++|++|++|||||++|||+++|++|+++|++|++++++.  ++++.+++.+.+.++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            478999999999999999999999999999999998642  34556666555677888888984  55678889999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      |++|+||||||+...    .++.+.+.++|++.+++|+.|++.++|+++|.|++++.|+||++||..+..+.++...|++
T Consensus       394 G~iDiLVnNAGi~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~a  469 (604)
T 2et6_A          394 GTIDILVNNAGILRD----RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSS  469 (604)
T ss_dssp             SCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHH
Confidence            999999999998643    5788999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+.+|+++|+.|++++||+||+|+||. .|+|.....+.                           ...+..+|+|+
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~---------------------------~~~~~~~pe~v  521 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE---------------------------QDKNLYHADQV  521 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------------------------CCSSCGGGT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch---------------------------hhccCCCHHHH
Confidence            999999999999999999999999999995 99886532110                           01224589999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+.++||+|+.+. +||++|.+|||+....
T Consensus       522 A~~v~~L~s~~~~-itG~~~~vdGG~~~~~  550 (604)
T 2et6_A          522 APLLVYLGTDDVP-VTGETFEIGGGWIGNT  550 (604)
T ss_dssp             HHHHHHTTSTTCC-CCSCEEEEETTEEEEE
T ss_pred             HHHHHHHhCCccC-CCCcEEEECCCeeEee
Confidence            9999999999988 9999999999987643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=5.8e-43  Score=304.96  Aligned_cols=251  Identities=25%  Similarity=0.330  Sum_probs=214.7

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ..++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++++|++|.++++++++.+.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999998888877777554 5679999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc-CCCCceEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|. +++.++||++||..+..+.++..
T Consensus       100 ~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  175 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFI----SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVV  175 (302)
T ss_dssp             HHTCSCSEEEECCCCCCC----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCH
T ss_pred             HHcCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcc
Confidence            999999999999997543    5677889999999999999999999999999997 45678999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch-hhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS-MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      .|+++|+|++.++++++.|++++||++++|+||++.|+ +.....+.           ...   ......  ..+.+++.
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~---~~~~~~--~~p~~~~~  239 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT-----------GTF---EKEMIG--RIPCGRLG  239 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT-----------SHH---HHHHHT--TCTTSSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccc-----------hhh---HHHHHh--cCCcCCCC
Confidence            99999999999999999999999999999999999998 43221110           000   111122  24667788


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|+|+++++|+++.+.+++|+.+.+|||+..+
T Consensus       240 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          240 TVEELANLAAFLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CHHHHHHHHHHHcCCcccccCCCEEEECCCeeec
Confidence            9999999999999998899999999999998754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-42  Score=298.49  Aligned_cols=261  Identities=28%  Similarity=0.364  Sum_probs=215.5

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      +....+++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.+.++.++++|++|.++++++++
T Consensus        12 ~~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   91 (274)
T 1ja9_A           12 PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD   91 (274)
T ss_dssp             ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            455667899999999999999999999999999999999999 7777777777776667789999999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCC
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGL  163 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~  163 (285)
                      ++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++++++.|+ + .++||++||..+. .+.+
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~  165 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGMEVW----CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIP  165 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCC
T ss_pred             HHHHHcCCCCEEEECCCCCCC----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCC
Confidence            999999999999999998643    5677889999999999999999999999999997 3 3899999999887 6778


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|+++|++++.+++.++.|++++||++++++||.+.|++.................   ..+.......  ..+.++
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~  240 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP---QEKIDEGLAN--MNPLKR  240 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC---HHHHHHHHHH--TSTTSS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc---hHHHHHHHHh--cCCCCC
Confidence            88999999999999999999999999999999999999999876432210000000011   0111112212  245677


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +++|+|+|+++++|+++.+.+++|+.+++|||+.
T Consensus       241 ~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          241 IGYPADIGRAVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             ccCHHHHHHHHHHHhCcccccccCcEEEecCCcC
Confidence            8899999999999999988899999999999973

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.4e-43  Score=309.49  Aligned_cols=258  Identities=20%  Similarity=0.177  Sum_probs=201.3

Q ss_pred             ccccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCch-----------hhHHHHHHhhcCCC---ceEEEecc
Q 040531            9 AYKTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDDA-----------AGIALADSLLSSSP---LVTYLHCD   72 (285)
Q Consensus         9 ~~~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~~-----------~~~~~~~~~~~~~~---~v~~~~~D   72 (285)
                      +.++|++|++|||||  ++|||++++++|+++|++|++++|++.           .+++. +++.. +.   .+.++.+|
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d   80 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLD   80 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECC
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-ccccccccccccc
Confidence            446689999999999  899999999999999999999997641           11111 22211 11   12334433


Q ss_pred             ------------CC--------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHH
Q 040531           73 ------------VS--------LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA  132 (285)
Q Consensus        73 ------------~s--------~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  132 (285)
                                  ++        |.++++++++++.+.++++|+||||||+...  ...++.+.+.++|++.+++|+.+++
T Consensus        81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~  158 (315)
T 2o2s_A           81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPE--VTKPLLETSRKGYLAASSNSAYSFV  158 (315)
T ss_dssp             TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCc--CCCCcccCCHHHHHHHHhhhhHHHH
Confidence                        33        2568999999999999999999999997531  1256788999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEcccccccCCCCC-ccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhh
Q 040531          133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGP-HAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAW  210 (285)
Q Consensus       133 ~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~-~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~  210 (285)
                      .++++++|.|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+|+|++.....
T Consensus       159 ~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~  236 (315)
T 2o2s_A          159 SLLQHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG  236 (315)
T ss_dssp             HHHHHHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred             HHHHHHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence            999999999965  4899999999998888887 58999999999999999999985 8999999999999999875432


Q ss_pred             cccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          211 KSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      ..         ......+...+.... ..|.++..+|||+|+.++||+++.+.|+||++|.+|||++....+
T Consensus       237 ~~---------~~~~~~~~~~~~~~~-~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  298 (315)
T 2o2s_A          237 KS---------GEKSFIDYAIDYSYN-NAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQA  298 (315)
T ss_dssp             CS---------SSSCHHHHHHHHHHH-HSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             cc---------ccchhHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeeccC
Confidence            10         000111111111111 247788999999999999999999999999999999999875433

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=5.3e-43  Score=297.18  Aligned_cols=237  Identities=24%  Similarity=0.296  Sum_probs=197.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   ..++.++++|++|.++++++++++.+.++++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            68999999999999999999999999999999998888777766   357899999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      ||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+|+
T Consensus        78 lvnnAg~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  154 (248)
T 3asu_A           78 LVNNAGLALG---MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFV  154 (248)
T ss_dssp             EEECCCCCCC---CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             EEECCCcCCC---CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHH
Confidence            9999998531   1567788999999999999999999999999999877789999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      ++|+++++.|++++||+||+|+||+|+ |++.......             ..+......     ......+|||+|+.+
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~-------------~~~~~~~~~-----~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          155 RQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-------------DDGKAEKTY-----QNTVALTPEDVSEAV  216 (248)
T ss_dssp             HHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC-------------chHHHHHHH-----hccCCCCHHHHHHHH
Confidence            999999999999999999999999999 9985421110             000001100     011235999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCcc
Q 040531          255 LYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      +||+++ ..+++|+.+.++++..
T Consensus       217 ~~l~s~-~~~~~g~~i~v~~~~~  238 (248)
T 3asu_A          217 WWVSTL-PAHVNINTLEMMPVTQ  238 (248)
T ss_dssp             HHHHHS-CTTCCCCEEEECCTTC
T ss_pred             HHHhcC-CccceeeEEEEccccc
Confidence            999997 4689999999998854

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-43  Score=304.07  Aligned_cols=253  Identities=25%  Similarity=0.352  Sum_probs=214.3

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-----CCCceEEEeccCCCHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-----SSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      .+..|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+     .+.++.++++|++|.+++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            33468999999999999999999999999999999999999988888877754     3567999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL  163 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~  163 (285)
                      +++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.+.++..++||++||.. ..+.+
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~  166 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFL----SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP  166 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT
T ss_pred             HHHHHHcCCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC
Confidence            9999999999999999997533    567788999999999999999999999999966555579999999988 77788


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ....|+++|+|++++++.++.|+.++||++++|+||+|+|++........            ..+.......  ..+.++
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------------~~~~~~~~~~--~~p~~~  232 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSW------------GQSFFEGSFQ--KIPAKR  232 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGG------------GGGGGTTGGG--GSTTSS
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhcccc------------chHHHHHHHh--cCcccC
Confidence            88999999999999999999999999999999999999999532211100            0000001111  235677


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +.+|+|+|++++||+++.+.+++|+.|.+|||++...
T Consensus       233 ~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          233 IGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             CCCHHHHHHHHHHHhCcccccCCCcEEEECCCeeccc
Confidence            8899999999999999999999999999999987653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.5e-42  Score=293.35  Aligned_cols=242  Identities=26%  Similarity=0.412  Sum_probs=211.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcCCCceEE-EeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTY-LHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++.+.+.++.. +.+|++|.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999998 88888888777777665667777 999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|
T Consensus        81 ~d~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (245)
T 2ph3_A           81 LDTLVNNAGITRD----TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASK  156 (245)
T ss_dssp             CCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHH
Confidence            9999999998643    567788999999999999999999999999999877789999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|++.+++.++.|++++||++++|+||+++|++.....             .   +.......  ..+.+++.+|+|+|+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~---~~~~~~~~--~~~~~~~~~~~dva~  218 (245)
T 2ph3_A          157 AGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP-------------Q---EVKEAYLK--QIPAGRFGRPEEVAE  218 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-------------H---HHHHHHHH--TCTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC-------------H---HHHHHHHh--cCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999865321             0   11111222  235677889999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++++.+.+++|+.+.+|||++.
T Consensus       219 ~~~~l~~~~~~~~~G~~~~v~gg~~~  244 (245)
T 2ph3_A          219 AVAFLVSEKAGYITGQTLCVDGGLTP  244 (245)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHHhCcccccccCCEEEECCCCCC
Confidence            99999998888999999999999763

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-42  Score=291.89  Aligned_cols=242  Identities=27%  Similarity=0.353  Sum_probs=205.7

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |+++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    ..+.++.+|++|.++++++++    
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----
Confidence            345789999999999999999999999999999999999988776665543    245677999999999988776    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...
T Consensus        73 ~~~~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIM----QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLIT  148 (244)
T ss_dssp             TCCCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             HcCCCCEEEECCcccCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcch
Confidence            56789999999998643    5677889999999999999999999999999998766 799999999999888888899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|++++.+++.++.|+++++|++++++||++.|++.......           .   ........  ..+.+++.+|
T Consensus       149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------~---~~~~~~~~--~~~~~~~~~~  212 (244)
T 1cyd_A          149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-----------P---EFARKLKE--RHPLRKFAEV  212 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-----------H---HHHHHHHH--HSTTSSCBCH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-----------H---HHHHHHHh--cCCccCCCCH
Confidence            999999999999999999999999999999999999986543211           1   11112222  2356778899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+++++++++.+.+++|+.+.+|||++.
T Consensus       213 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          213 EDVVNSILFLLSDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             HHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence            9999999999999989999999999999875

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=6.5e-44  Score=313.57  Aligned_cols=258  Identities=20%  Similarity=0.196  Sum_probs=170.9

Q ss_pred             ccccCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCc-----------hhhH-----------HHHHHhhcCCC
Q 040531            9 AYKTLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDD-----------AAGI-----------ALADSLLSSSP   64 (285)
Q Consensus         9 ~~~~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~-----------~~~~-----------~~~~~~~~~~~   64 (285)
                      +.++|++|++|||||  ++|||+++|++|+++|++|++++|++           +.++           +..+++.+.+.
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            446789999999999  89999999999999999999998753           1111           12222222111


Q ss_pred             ---ceEEEecc------------CCC--------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHH
Q 040531           65 ---LVTYLHCD------------VSL--------EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFD  121 (285)
Q Consensus        65 ---~v~~~~~D------------~s~--------~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~  121 (285)
                         ...++.+|            +++        .++++++++++.+.++++|+||||||+...  ...++.+.+.++|+
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~  160 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPE--VTKPLLQTSRKGYL  160 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSS--SSSCGGGCCHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCC--CCCccccCCHHHHH
Confidence               12334333            333        348899999999999999999999997531  12577889999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC-ccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCC
Q 040531          122 NIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP-HAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPF  199 (285)
Q Consensus       122 ~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~-~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg  199 (285)
                      +.+++|+.+++.++++++|.|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||
T Consensus       161 ~~~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  238 (319)
T 2ptg_A          161 AAVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG  238 (319)
T ss_dssp             HHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence            99999999999999999999965  4899999999998888887 68999999999999999999985 89999999999


Q ss_pred             CccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          200 GVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       200 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|++........         .....+...+.... ..|.+++.+|||+|++++||+++.+.|+||++|.+|||++..
T Consensus       239 ~v~T~~~~~~~~~~---------~~~~~~~~~~~~~~-~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          239 PLKSRAASAIGKAG---------DKTFIDLAIDYSEA-NAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             CCC-----------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             CccChhhhhccccc---------chhhHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            99999865421100         00000011011111 236678899999999999999999999999999999999875


Q ss_pred             c
Q 040531          280 K  280 (285)
Q Consensus       280 ~  280 (285)
                      .
T Consensus       309 ~  309 (319)
T 2ptg_A          309 G  309 (319)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-42  Score=291.78  Aligned_cols=235  Identities=22%  Similarity=0.261  Sum_probs=210.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.++++.+++.+.+.++.++++|++|.++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999998888888777666678999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH  166 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~  166 (285)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++..
T Consensus        81 ~~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  156 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRF----GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSS  156 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCH
T ss_pred             HHhCCCCCEEEEcCCcCCc----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCc
Confidence            9999999999999998643    567788999999999999999999999999999877789999999999998888999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|++.++++++.|++++||++++|+||+++|++......            ..               ..+..+
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~---------------~~~~~~  209 (244)
T 2bd0_A          157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------EM---------------QALMMM  209 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------TT---------------GGGSBC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------------cc---------------cccCCC
Confidence            999999999999999999999999999999999999998643210            00               013579


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|+|+.+++++++.+.+++|+++..|+|..+.
T Consensus       210 ~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~~  242 (244)
T 2bd0_A          210 PEDIAAPVVQAYLQPSRTVVEEIILRPTSGDIQ  242 (244)
T ss_dssp             HHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC-
T ss_pred             HHHHHHHHHHHHhCCccccchheEEeccccccC
Confidence            999999999999999999999999999997763

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-43  Score=296.39  Aligned_cols=237  Identities=22%  Similarity=0.316  Sum_probs=196.3

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ++....++++|++|||||++|||++++++|+++|++|++++|+.+..    +++    .++.++ +|+  .+++++++++
T Consensus        10 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~----~~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           10 HHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS----GHRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             ------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT----CSEEEE-CCT--TTCHHHHHHH
T ss_pred             hhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh----CCeEEE-eeH--HHHHHHHHHH
Confidence            45566689999999999999999999999999999999999987432    222    256777 999  4566666654


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +    .++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++.
T Consensus        79 ~----~~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  150 (249)
T 1o5i_A           79 V----KEVDILVLNAGGPKA----GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL  150 (249)
T ss_dssp             S----CCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB
T ss_pred             h----cCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCC
Confidence            4    379999999997543    56788899999999999999999999999999988778999999999999888899


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHH-HHHhhhhcccCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME-ELVRGLANLKGVT  244 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  244 (285)
                      ..|+++|+|++.++++++.|++++||+||+|+||+++|++.....+                +... ....  ..+.+++
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----------------~~~~~~~~~--~~p~~~~  212 (249)
T 1o5i_A          151 YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS----------------EEKKKQVES--QIPMRRM  212 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC----------------HHHHHHHHT--TSTTSSC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch----------------hhHHHHHHh--cCCCCCC
Confidence            9999999999999999999999999999999999999998653211                0111 1111  2466788


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .+|+|+|++++||+++.+.+++|+++.+|||++..
T Consensus       213 ~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          213 AKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             cCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            99999999999999999999999999999998753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.1e-42  Score=302.67  Aligned_cols=252  Identities=22%  Similarity=0.175  Sum_probs=200.1

Q ss_pred             ccccCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchh-----------hHHHHHHhhcCCC--c-eEEEecc
Q 040531            9 AYKTLEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAA-----------GIALADSLLSSSP--L-VTYLHCD   72 (285)
Q Consensus         9 ~~~~l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~-----------~~~~~~~~~~~~~--~-v~~~~~D   72 (285)
                      +.++|++|++|||||+  +|||+++|++|+++|++|++++|+...           +++. +++.+ +.  + ...+.+|
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~   79 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEEC
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccc
Confidence            3567899999999999  999999999999999999999876321           1111 11111 11  1 2333333


Q ss_pred             --------CC----C--------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHH
Q 040531           73 --------VS----L--------EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA  132 (285)
Q Consensus        73 --------~s----~--------~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  132 (285)
                              ++    |        .++++++++++.++++++|+||||||+...  ...++.+.+.++|++.+++|+.+++
T Consensus        80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~  157 (297)
T 1d7o_A           80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE--VSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCcc--CCCCcccCCHHHHHHHHHHhhhHHH
Confidence                    33    2        568999999999999999999999997431  1256788899999999999999999


Q ss_pred             HHHHHHHHhhcCCCCceEEEEcccccccCCCCC-ccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhh
Q 040531          133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGP-HAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAW  210 (285)
Q Consensus       133 ~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~-~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~  210 (285)
                      .++++++|.|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+|+|++.....
T Consensus       158 ~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~  235 (297)
T 1d7o_A          158 SLLSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             HHHHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             HHHHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc
Confidence            999999999964  4899999999998888887 69999999999999999999985 8999999999999999864310


Q ss_pred             cccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          211 KSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                                    ...+.......  ..|.++..+|||+|+.++||+++.+.+++|+.|.+|||++....|
T Consensus       236 --------------~~~~~~~~~~~--~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~~  291 (297)
T 1d7o_A          236 --------------FIDTMIEYSYN--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVA  291 (297)
T ss_dssp             --------------HHHHHHHHHHH--HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             --------------ccHHHHHHhhc--cCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeecCC
Confidence                          01111111111  246788899999999999999999999999999999999876554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.7e-42  Score=290.79  Aligned_cols=225  Identities=19%  Similarity=0.205  Sum_probs=187.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|+++.++++++++++.+.   .|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSI---PST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSC---CSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhc---CCE
Confidence            68999999999999999999999999999999999888777766   567889999999999999998866443   499


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      ||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++||+|+
T Consensus        76 lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~  150 (230)
T 3guy_A           76 VVHSAGSGYF----GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAV  150 (230)
T ss_dssp             EEECCCCCCC----SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             EEEeCCcCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHH
Confidence            9999998643    6788899999999999999999999999999997654 4999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      ++|+++++.|++++||+||+|+||+|.|++.......                          .+.++..+|||+|+.++
T Consensus       151 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------------------------~~~~~~~~~~dvA~~i~  204 (230)
T 3guy_A          151 KGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKS--------------------------LDTSSFMSAEDAALMIH  204 (230)
T ss_dssp             HHHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCC--------------------------CCcccCCCHHHHHHHHH
Confidence            9999999999999999999999999999986543211                          23466789999999999


Q ss_pred             HHhc-CCCCcccccEEEecCCcc
Q 040531          256 YLAS-DESKYISGHNLVVDGGFT  277 (285)
Q Consensus       256 ~l~s-~~~~~~~G~~i~vdgG~~  277 (285)
                      |+++ +.+.+++|+.+..|....
T Consensus       205 ~l~~~~~~~~itg~~~~~~~~~~  227 (230)
T 3guy_A          205 GALANIGNGYVSDITVNREGHHH  227 (230)
T ss_dssp             HHCCEETTEEEEEEEEEC-----
T ss_pred             HHHhCcCCCCccceeecCCCCCC
Confidence            9986 788999999999887643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=7.4e-43  Score=295.01  Aligned_cols=225  Identities=15%  Similarity=0.113  Sum_probs=196.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc-
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH-   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~-   90 (285)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+...          ....++++|++|.++++++++++.+.+ 
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999999876532          235778999999999999999999999 


Q ss_pred             -CCccEEEECCCCCCCCCCCCCC-CCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           91 -GRLDILFNNAGVLGNQSKHKSI-TDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        91 -~~id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                       +++|+||||||+...    .++ .+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|
T Consensus        74 ~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  147 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAG----GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGY  147 (241)
T ss_dssp             TCCEEEEEECCCCCCC----BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHH
T ss_pred             CCCCCEEEEcccccCC----CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHH
Confidence             799999999998643    455 67789999999999999999999999999964  5899999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          169 TVSKHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      +++|+|++.|+++++.|++  ++||+||+|+||+++|++.......                          ....+..+
T Consensus       148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--------------------------~~~~~~~~  201 (241)
T 1dhr_A          148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--------------------------ADFSSWTP  201 (241)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--------------------------SCGGGSEE
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--------------------------hhhccCCC
Confidence            9999999999999999999  8999999999999999987543211                          00112357


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|+|+.+++++++.+.+++|+.+.+|||...
T Consensus       202 ~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~~  233 (241)
T 1dhr_A          202 LEFLVETFHDWITGNKRPNSGSLIQVVTTDGK  233 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCCCTTCEEEEEEETTE
T ss_pred             HHHHHHHHHHHhcCCCcCccceEEEEeCCCCc
Confidence            89999999999999999999999999998764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.6e-42  Score=298.90  Aligned_cols=241  Identities=25%  Similarity=0.365  Sum_probs=201.3

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++++|++|.++++++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            44589999999999999999999999999999999999999999999888777788999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|
T Consensus       106 ~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  181 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVA----GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTY  181 (301)
T ss_dssp             HSSCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHH
T ss_pred             CCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHH
Confidence            9999999999998744    5788899999999999999999999999999998766 7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+++|+++++.|++++||+|++|+||+|+|++.............   .    .......+... ......++|+
T Consensus       182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~---~----~~~~~~~~~~~-~~~~~~~~pe  253 (301)
T 3tjr_A          182 GVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYG---M----SATPEGAFGPL-PTQDESVSAD  253 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC------------------------------CCCHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhc---c----ccChhhhcccc-ccccCCCCHH
Confidence            99999999999999999999999999999999999998754221000000   0    00000000000 1223467999


Q ss_pred             HHHHHHHHHhcCCC
Q 040531          249 DIAEAALYLASDES  262 (285)
Q Consensus       249 eva~~~~~l~s~~~  262 (285)
                      |+|+.++.++....
T Consensus       254 dvA~~i~~~l~~~~  267 (301)
T 3tjr_A          254 DVARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999886543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=7.5e-43  Score=306.52  Aligned_cols=236  Identities=26%  Similarity=0.404  Sum_probs=203.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe---------cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD---------IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~---------r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~   81 (285)
                      ++|++|++|||||++|||++++++|+++|++|++++         |+.+.+++..+++.+.+..   ..+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHH
Confidence            578999999999999999999999999999999975         4667777777777654443   3589999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC
Q 040531           82 LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG  161 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~  161 (285)
                      +++++.+.++++|+||||||+...    .++.+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~  157 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRD----RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG  157 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC
Confidence            999999999999999999998643    4677889999999999999999999999999998877899999999988888


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .++...|++||+|++.|++.++.|++++||+||+|+||++ |++.....+                +.   ...      
T Consensus       158 ~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~----------------~~---~~~------  211 (319)
T 1gz6_A          158 NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP----------------ED---LVE------  211 (319)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC----------------HH---HHH------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC----------------hh---hhc------
Confidence            8889999999999999999999999999999999999998 877543211                00   001      


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                        ..+|+|+|+.++||+++. .+++|+.|.+|||+....+|
T Consensus       212 --~~~p~dvA~~~~~l~s~~-~~~tG~~~~v~GG~~~~~~~  249 (319)
T 1gz6_A          212 --ALKPEYVAPLVLWLCHES-CEENGGLFEVGAGWIGKLRW  249 (319)
T ss_dssp             --HSCGGGTHHHHHHHTSTT-CCCCSCEEEEETTEEEEEEE
T ss_pred             --cCCHHHHHHHHHHHhCch-hhcCCCEEEECCCeEEEEee
Confidence              248999999999999874 58999999999998764433

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-42  Score=291.21  Aligned_cols=224  Identities=21%  Similarity=0.198  Sum_probs=195.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc--
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH--   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~--   90 (285)
                      |++|++|||||++|||++++++|+++|++|++++|+.+...          ....++++|++|.++++++++++.+.+  
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999876532          235778999999999999999999998  


Q ss_pred             CCccEEEECCCCCCCCCCCCCC-CCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSI-TDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|+||||||+...    .++ .+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+
T Consensus        71 g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  144 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAG----GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYG  144 (236)
T ss_dssp             CCEEEEEECCCCCCC----BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHH
T ss_pred             CCCCEEEECCcccCC----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHH
Confidence            799999999998643    455 67788999999999999999999999999964  58999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          170 VSKHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ++|+|+++|+++++.|++  ++||+||+|+||+++|++.......                          ....+..+|
T Consensus       145 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------------------~~~~~~~~~  198 (236)
T 1ooe_A          145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--------------------------ADHSSWTPL  198 (236)
T ss_dssp             HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--------------------------CCGGGCBCH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC--------------------------ccccccCCH
Confidence            999999999999999998  8999999999999999987543211                          011234689


Q ss_pred             HHHHHHHH-HHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAAL-YLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~-~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+.++ +|+++.+.+++|+.|.+|||...
T Consensus       199 ~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          199 SFISEHLLKWTTETSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             HHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHHHHHHHHHHcCCCcccccccEEEEecCCCc
Confidence            99999998 55599999999999999999764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1e-42  Score=302.15  Aligned_cols=234  Identities=21%  Similarity=0.216  Sum_probs=190.4

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ...+++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            34567899999999999999999999999999999999999999887776655   567999999999999999988765


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----  161 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----  161 (285)
                          +++|+||||||+..      +..+.+.++|++.+++|+.+++.++++++|.|.+    +||++||..+..+     
T Consensus        85 ----~~iD~lv~nAg~~~------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~  150 (291)
T 3rd5_A           85 ----SGADVLINNAGIMA------VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLE  150 (291)
T ss_dssp             ----CCEEEEEECCCCCS------CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSS
T ss_pred             ----CCCCEEEECCcCCC------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcc
Confidence                78999999999863      2345678889999999999999999999999964    7999999887754     


Q ss_pred             --------CCCCccchhhHHHHHHHHHHHHHHhCCCC--cEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHH
Q 040531          162 --------GLGPHAYTVSKHAIVGLTKNTACELGKYG--IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKME  231 (285)
Q Consensus       162 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                              .++...|++||+|++.|++.++.|++++|  |+||+|+||+|+|++.+.....                 ..
T Consensus       151 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~-----------------~~  213 (291)
T 3rd5_A          151 DLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK-----------------LG  213 (291)
T ss_dssp             CTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------
T ss_pred             cccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH-----------------HH
Confidence                    23456899999999999999999999877  9999999999999997653211                 00


Q ss_pred             HHHhhhhcccCCCCC-HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          232 ELVRGLANLKGVTLK-ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~-~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ....  ..+.++... |||+|+.++||+++  .+++|+.|.+|||+..
T Consensus       214 ~~~~--~~~~~~~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          214 DALM--SAATRVVATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             -------------CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HHHH--HHHHHHHhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence            1111  123344444 99999999999988  4899999999999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=5.7e-43  Score=331.63  Aligned_cols=242  Identities=26%  Similarity=0.383  Sum_probs=193.1

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec---------CchhhHHHHHHhhcCCCceEEEeccCCCH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI---------DDAAGIALADSLLSSSPLVTYLHCDVSLE   76 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~D~s~~   76 (285)
                      +....++|+||++|||||++|||+++|++|+++|++|++++|         +.+.+++..+++.+.+..+   .+|+++.
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~   86 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSV   86 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCH
Confidence            445667899999999999999999999999999999999988         6777777778776655554   4799999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ++++++++++.+.++++|+||||||+...    .++.+.+.++|++.+++|+.|++.++++++|.|++++.|+||++||.
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~----~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~  162 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRD----RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN  162 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCC----CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence            99999999999999999999999998754    67888999999999999999999999999999998889999999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          157 ASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       157 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .+..+.++...|++||+|+++|+++++.|++++||+||+|+||.+ |++.....+.                   .    
T Consensus       163 a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~-------------------~----  218 (613)
T 3oml_A          163 SGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD-------------------I----  218 (613)
T ss_dssp             HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH-------------------H----
T ss_pred             HHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch-------------------h----
Confidence            999999999999999999999999999999999999999999975 5554432111                   0    


Q ss_pred             hhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccccc
Q 040531          237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCV  283 (285)
Q Consensus       237 ~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  283 (285)
                          ..+..+|||+|+.++||+++. .++||++|.+|||++....|.
T Consensus       219 ----~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~~~~~~~~  260 (613)
T 3oml_A          219 ----LFNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGWATKLHMV  260 (613)
T ss_dssp             ----HHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTEEEEECCC
T ss_pred             ----hhhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCeEEEEEEE
Confidence                112358999999999999998 899999999999999877664

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=3e-42  Score=305.30  Aligned_cols=244  Identities=12%  Similarity=-0.006  Sum_probs=201.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCchhhH------------HHHHHhhcCCCceEEEeccCCCHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVK-HGAKVVIADIDDAAGI------------ALADSLLSSSPLVTYLHCDVSLEQDI   79 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~D~s~~~~i   79 (285)
                      -.+|++|||||++|||+++++.|++ +|++|++++|+.+...            .+.+.+.+.+.++..+.+|+++.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4699999999999999999999999 9999999998765432            22334455577889999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCC---------CCCCCC---------------------CCCCHHHHHHHHHhhhh
Q 040531           80 QNLINVTISKHGRLDILFNNAGVLGNQ---------SKHKSI---------------------TDFDANEFDNIIRINVR  129 (285)
Q Consensus        80 ~~~~~~i~~~~~~id~lv~~ag~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~n~~  129 (285)
                      +++++++.+.+|++|+||||||.....         +..+++                     .+.+.++|++.+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            999999999999999999999974110         012344                     77899999999999999


Q ss_pred             hHH-HHHHHHHHh-hcCCCCceEEEEcccccccCCCCC--ccchhhHHHHHHHHHHHHHHhCCC-CcEEEEEeCCCccch
Q 040531          130 GAA-LGMKYAAKV-MVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACELGKY-GIRVNCISPFGVATS  204 (285)
Q Consensus       130 ~~~-~l~~~~~~~-~~~~~~g~ii~vss~~~~~~~~~~--~~Y~asKaa~~~l~~~la~e~~~~-~i~v~~v~pg~v~t~  204 (285)
                      +.| .+++++.+. |+ ++.|+||++||.++..+.|.+  ..|++||+|+++++|+||.||+++ |||||+|+||+|.|+
T Consensus       205 ~~~~~~~~~~~~~~m~-~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVL-AEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHTCE-EEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hHHHHHHHHHHHHhhh-hCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            998 788887754 54 346999999999999988887  999999999999999999999999 999999999999999


Q ss_pred             hhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          205 MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.......              +......    ..++++..+||++++.+.||+|+   ++.|+.+.+|++..+
T Consensus       284 ~s~~ip~~--------------p~y~~~l----~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~  336 (405)
T 3zu3_A          284 ASSAIPMM--------------PLYLSLL----FKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRL  336 (405)
T ss_dssp             HHHTSTTH--------------HHHHHHH----HHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCE
T ss_pred             hhhcCCCC--------------cHHHHHH----HHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCC
Confidence            97653211              1111111    12466778999999999999988   688999999998665

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-41  Score=291.00  Aligned_cols=242  Identities=29%  Similarity=0.417  Sum_probs=199.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|.++++++++.+.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999988887777776543  3468899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCCCCCcc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++|+||||||...            .++|++.+++|+.+++.+++.++|.|++++   .++||++||..+..+.++...
T Consensus        85 g~id~lv~~Ag~~~------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (267)
T 2gdz_A           85 GRLDILVNNAGVNN------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPV  152 (267)
T ss_dssp             SCCCEEEECCCCCC------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHH
T ss_pred             CCCCEEEECCCCCC------------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCch
Confidence            99999999999741            346889999999999999999999997653   689999999999888888999


Q ss_pred             chhhHHHHHHHHHHH--HHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          168 YTVSKHAIVGLTKNT--ACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       168 Y~asKaa~~~l~~~l--a~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      |++||+|++.+++++  +.|++++||+||+|+||+++|++..........  .  .. ....+.+..   .  .+..+.+
T Consensus       153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~--~~-~~~~~~~~~---~--~~~~~~~  222 (267)
T 2gdz_A          153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENM--G--QY-IEYKDHIKD---M--IKYYGIL  222 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHH--G--GG-GGGHHHHHH---H--HHHHCCB
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccccccc--c--hh-hhHHHHHHH---H--hccccCC
Confidence            999999999999995  689999999999999999999986543111000  0  00 000011111   0  1123467


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|+|++++||+++.  +++|++|.+|||...
T Consensus       223 ~~~dvA~~v~~l~s~~--~~~G~~~~v~gg~~~  253 (267)
T 2gdz_A          223 DPPLIANGLITLIEDD--ALNGAIMKITTSKGI  253 (267)
T ss_dssp             CHHHHHHHHHHHHHCT--TCSSCEEEEETTTEE
T ss_pred             CHHHHHHHHHHHhcCc--CCCCcEEEecCCCcc
Confidence            9999999999999875  499999999998864

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=6.3e-42  Score=291.09  Aligned_cols=225  Identities=20%  Similarity=0.198  Sum_probs=198.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +.-+|++|||||++|||++++++|+++|++|++++|+.+...            -..+.+|++|.++++++++++.+.++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            445899999999999999999999999999999999876532            23578999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+++
T Consensus        87 ~iD~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s  161 (251)
T 3orf_A           87 KVDTFVCAAGGWSGG---NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGAT  161 (251)
T ss_dssp             CEEEEEECCCCCCCB---CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCEEEECCccCCCC---CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHH
Confidence            999999999986542   33677889999999999999999999999999965  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          172 KHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      |+|++.++++++.|++  ++||+||+|+||+|+|++.......                          .+.++..+|+|
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--------------------------~~~~~~~~~~d  215 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD--------------------------ANFDDWTPLSE  215 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT--------------------------SCGGGSBCHHH
T ss_pred             HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc--------------------------ccccccCCHHH
Confidence            9999999999999987  8899999999999999997654332                          23456779999


Q ss_pred             HHHHHHHHhcC-CCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASD-ESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~-~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+.+++|+++ .+.+++|+.|.+++|....
T Consensus       216 va~~i~~l~~~~~~~~~tG~~i~v~~g~~~~  246 (251)
T 3orf_A          216 VAEKLFEWSTNSDSRPTNGSLVKFETKSKVT  246 (251)
T ss_dssp             HHHHHHHHHHCGGGCCCTTCEEEEEEETTEE
T ss_pred             HHHHHHHHhcCccccCCcceEEEEecCCccc
Confidence            99999999999 8899999999999887543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.5e-41  Score=291.81  Aligned_cols=249  Identities=21%  Similarity=0.249  Sum_probs=201.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+   +.++.++++|++|.++++++++++.+++
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999999999999999888776654   5679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++
T Consensus        78 g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQV----GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSA  153 (281)
T ss_dssp             SCCSEEEECCCCEEE----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             CCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHH
Confidence            999999999998643    5778899999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|++.++++++.|++++||+||+|+||+|+|++............   ...............  ..+.++..+|+|+
T Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~dv  228 (281)
T 3m1a_A          154 TKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEEN---PAYAEKVGPTRQLVQ--GSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBC---TTTHHHHHHHHHHHH--C-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcc---hhhHHHhHHHHHHHh--hccCCCCCCHHHH
Confidence            99999999999999999999999999999999998753321100000   000011111111111  2455678899999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecC
Q 040531          251 AEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      |+++++++++..   .|..+++.+
T Consensus       229 a~a~~~~~~~~~---~~~~~~l~s  249 (281)
T 3m1a_A          229 AAAIRLALDTEK---TPLRLALGG  249 (281)
T ss_dssp             HHHHHHHHHSSS---CCSEEEESH
T ss_pred             HHHHHHHHhCCC---CCeEEecCc
Confidence            999999997754   345555543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=287.42  Aligned_cols=244  Identities=28%  Similarity=0.358  Sum_probs=204.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      |.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+  .++.++++|++|.++++++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999988888877776543  468899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC--ceEEEEcccccc--cCCC
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS--GCIISTASVASL--MGGL  163 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~ii~vss~~~~--~~~~  163 (285)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.+++.|++++.  ++||++||..+.  .+.+
T Consensus       107 ~~~g~iD~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARP----DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  182 (279)
T ss_dssp             HHHCCCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HhCCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCC
Confidence            999999999999998643    56778899999999999999999999999999987663  899999999887  4666


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      +...|+++|+|++.|++.++.|++  +.+|++++|+||+|.|++.......            . .+....     ..+.
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~------------~-~~~~~~-----~~~~  244 (279)
T 1xg5_A          183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK------------D-PEKAAA-----TYEQ  244 (279)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT------------C-HHHHHH-----HHC-
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhccc------------C-hhHHhh-----hccc
Confidence            778999999999999999999998  8899999999999999986433211            0 011111     1133


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      .+.++|+|+|++++|++++...+.+|+....++|
T Consensus       245 ~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          245 MKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             --CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             ccCCCHHHHHHHHHHHhcCCcceEeeeEEEccCC
Confidence            4578999999999999999888888875555444

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.6e-41  Score=294.78  Aligned_cols=244  Identities=25%  Similarity=0.345  Sum_probs=193.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC--ceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      +|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+...+.  ++.++++|+++.++++++++.+
T Consensus         2 ~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            2 SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             -CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            46689999999999999999999999999999999999999999988888765444  7999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC------CCceEEEEccccccc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR------RSGCIISTASVASLM  160 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~ii~vss~~~~~  160 (285)
                      .+.++++|+||||||+...    .++.+.+.++|++++++|+.|++.++++++|.|.++      +.|+||++||..+..
T Consensus        82 ~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~  157 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLF----QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL  157 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC
T ss_pred             HHhCCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc
Confidence            9999999999999998644    678889999999999999999999999999999764      579999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      +.++...|++||+|+++|+++++.|+.++||+|++|+||+|+|++............      .................
T Consensus       158 ~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~  231 (319)
T 3ioy_A          158 AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALK------GEVKPVDKTAVERLAGV  231 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------------CCG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhc------ccccchhHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999764322100000      00000000001111111


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCC
Q 040531          241 KGVTLKARDIAEAALYLASDES  262 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~  262 (285)
                      ....++|+++|+.++..+....
T Consensus       232 ~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          232 HEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             GGSSBCHHHHHHHHHHHHHTTC
T ss_pred             hhcCCCHHHHHHHHHHHHHcCC
Confidence            1122699999999999886654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.7e-40  Score=279.07  Aligned_cols=228  Identities=29%  Similarity=0.333  Sum_probs=191.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ..+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    .++.++++|++|.++++++++++.+.+++
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988877666554    26888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|
T Consensus        79 id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  154 (234)
T 2ehd_A           79 LSALVNNAGVGVM----KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASK  154 (234)
T ss_dssp             CCEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHH
Confidence            9999999998643    567788999999999999999999999999999888889999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|++.++++++.|++++||++++|+||+++|++.... +                +   . +        ...+|+|+|+
T Consensus       155 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~----------------~---~-~--------~~~~~~dvA~  205 (234)
T 2ehd_A          155 FGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-P----------------G---Q-A--------WKLKPEDVAQ  205 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------------------------CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-c----------------c---c-c--------CCCCHHHHHH
Confidence            9999999999999999999999999999999875421 0                0   0 0        0359999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .+++++++.+.+++|+.+..++...
T Consensus       206 ~~~~l~~~~~~~~~g~~~~~~~~~~  230 (234)
T 2ehd_A          206 AVLFALEMPGHAMVSEIELRPTRPT  230 (234)
T ss_dssp             HHHHHHHSCCSSCCCEEECCC----
T ss_pred             HHHHHhCCCcccccceEEEeecCCC
Confidence            9999999999999999887766543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.3e-42  Score=305.87  Aligned_cols=246  Identities=14%  Similarity=0.041  Sum_probs=199.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCchhhHH------------HHHHhhcCCCceEEEeccCCCHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVK-HGAKVVIADIDDAAGIA------------LADSLLSSSPLVTYLHCDVSLEQDIQ   80 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~D~s~~~~i~   80 (285)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+.+++            +.+.+.+.+.++..+++|+++.++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            599999999999999999999999 99999999998765432            33455556778999999999999999


Q ss_pred             HHHHHHHHHc-CCccEEEECCCCCCCC---------CCCCCC---------------------CCCCHHHHHHHHHhhhh
Q 040531           81 NLINVTISKH-GRLDILFNNAGVLGNQ---------SKHKSI---------------------TDFDANEFDNIIRINVR  129 (285)
Q Consensus        81 ~~~~~i~~~~-~~id~lv~~ag~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~n~~  129 (285)
                      ++++.+.+.+ |+||+||||||.....         ....++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999973100         011333                     36799999999999999


Q ss_pred             hHH-HHHHHHHHhhcCCCCceEEEEcccccccCCCCC--ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          130 GAA-LGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       130 ~~~-~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~--~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                      +.| .+++++.+.+..++.|+||++||.++..+.|.+  ..|++||+|+.+|+|+||.||+++|||||+|+||+|.|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            997 788888765433456999999999998887766  89999999999999999999999999999999999999997


Q ss_pred             hhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCccc-ccEEEecCCccc
Q 040531          207 VNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYIS-GHNLVVDGGFTT  278 (285)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~-G~~i~vdgG~~~  278 (285)
                      .....              .+......    ..+++|.++|||+++.+.||+|+.- |.+ |+...+|++-.+
T Consensus       300 ~~ip~--------------~~~~~~~~----~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          300 AAIPV--------------MPLYISMV----YKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             GGSTH--------------HHHHHHHH----HHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             hcCCC--------------ChHHHHHH----HhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            65311              11111111    2356778899999999999999864 766 776668886544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=4.9e-41  Score=285.91  Aligned_cols=240  Identities=23%  Similarity=0.233  Sum_probs=194.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCH-HHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLE-QDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~-~~i~~~~~~i   86 (285)
                      |+|++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+.  +.++.++++|++|. ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            4689999999999999999999999999997 9999998632  122222221  35688999999998 9999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGL  163 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~~  163 (285)
                      .+.++++|+||||||+.            +.++|++.+++|+.+++.++++++|.|.+++   .|+||++||..+..+.+
T Consensus        79 ~~~~g~id~lv~~Ag~~------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  146 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH  146 (254)
T ss_dssp             HHHHSCCCEEEECCCCC------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT
T ss_pred             HHhcCCCCEEEECCccC------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC
Confidence            99999999999999973            3456899999999999999999999997654   68999999999998888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      +...|++||+|++.++++++.|++++||+|++|+||+|+|++....... .          ...+........     ..
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~----------~~~~~~~~~~~~-----~~  210 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW-L----------DVEPRVAELLLS-----HP  210 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG-G----------GSCTTHHHHHTT-----SC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchh-h----------hhhHHHHHHHhc-----CC
Confidence            9999999999999999999999988899999999999999987642110 0          000011111111     12


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccccccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNCV  283 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~~  283 (285)
                      ..+|||+|+.++++++   .+++|+.+.+|||+.....|.
T Consensus       211 ~~~~~dvA~~i~~~~~---~~~~G~~~~v~gG~~~~~~~~  247 (254)
T 1sby_A          211 TQTSEQCGQNFVKAIE---ANKNGAIWKLDLGTLEAIEWT  247 (254)
T ss_dssp             CEEHHHHHHHHHHHHH---HCCTTCEEEEETTEEEECCCC
T ss_pred             CCCHHHHHHHHHHHHH---cCCCCCEEEEeCCceeEeccc
Confidence            3489999999999995   468999999999986655553

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-40  Score=279.64  Aligned_cols=226  Identities=19%  Similarity=0.198  Sum_probs=192.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+.++++.+ +  .+.++.++++|+++.++++++++++.+.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999  999999999888765532 2  35679999999999999999999999999


Q ss_pred             C--CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC------C-----CceEEEEcccc
Q 040531           91 G--RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR------R-----SGCIISTASVA  157 (285)
Q Consensus        91 ~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~ii~vss~~  157 (285)
                      +  ++|+||||||...+   ..++.+.+.++|++.+++|+.+++.++++++|.|+++      +     .++||++||..
T Consensus        78 g~~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  154 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLS---YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             GGGCCCEEEECCCCCCC---BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             CCCCCcEEEECCcccCC---CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCc
Confidence            8  99999999998652   2567788999999999999999999999999998765      4     78999999998


Q ss_pred             cccCC-------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH
Q 040531          158 SLMGG-------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM  230 (285)
Q Consensus       158 ~~~~~-------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      +..+.       ++...|+++|+|++.++++++.|++++||++++|+||+|+|++...                      
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------  212 (250)
T 1yo6_A          155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------  212 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------
Confidence            87765       5678999999999999999999999999999999999999988532                      


Q ss_pred             HHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          231 EELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                                 ....+|+|+|+.+++++++...+++|+.+.+|||..
T Consensus       213 -----------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          213 -----------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             -----------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             -----------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence                       123589999999999999988899999999999853

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-40  Score=276.95  Aligned_cols=232  Identities=26%  Similarity=0.358  Sum_probs=194.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .           .++.++++|++|.++++++++++ +.++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            689999999999999999999999999999999865 1           23588999999999999999999 8889999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---C---ceEEEEcccccccCCCCCccc
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---S---GCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~---g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++|||||............+.+.++|++.+++|+.+++.+++++.+.|.+++   .   ++||++||..+..+.++...|
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  148 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  148 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence            9999999865421111112234559999999999999999999999998654   3   499999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc-CCCCCH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK-GVTLKA  247 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  247 (285)
                      +++|+|++.+++.++.|++++||++++|+||+++|++......                ........  ..+. +++.+|
T Consensus       149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~  210 (242)
T 1uay_A          149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE----------------KAKASLAA--QVPFPPRLGRP  210 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH----------------HHHHHHHT--TCCSSCSCCCH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch----------------hHHHHHHh--hCCCcccCCCH
Confidence            9999999999999999999999999999999999998754211                11111222  2345 778899


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|+|+++++|+++  .+++|+.|.+|||+++.
T Consensus       211 ~dva~~~~~l~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          211 EEYAALVLHILEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhcC--CCCCCcEEEEcCCeecC
Confidence            9999999999987  78999999999999764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.2e-39  Score=284.02  Aligned_cols=255  Identities=22%  Similarity=0.245  Sum_probs=190.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-----chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-----DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      |+|++|++|||||++|||++++++|+++|++|++++|+     .+.++++.+.+.+.+.++.++++|++|.+++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            45789999999999999999999999999999988775     4455555555555567899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-CCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-GLG  164 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-~~~  164 (285)
                      +.+++|++|+||||||+...    .++.+.+.++|++.+++|+.|++.++++++|.|++++.|+||++||..+..+ .++
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~  156 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVF----GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY  156 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS
T ss_pred             HHHHcCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc
Confidence            99999999999999998643    6788899999999999999999999999999999888999999999988744 466


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCC-----CCCchHHHHHHHHHHhhhhc
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDS-----GKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...|++||+|+++++++++.|++++||+|++|+||+|.|++..............     ..+.....+.+.....   .
T Consensus       157 ~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  233 (324)
T 3u9l_A          157 LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFA---A  233 (324)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHH---H
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHH---H
Confidence            7889999999999999999999999999999999999987653221110000000     0000001112222222   1


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEec
Q 040531          240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVD  273 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vd  273 (285)
                      ......+|+++|++++.++..... .....+.++
T Consensus       234 l~~~~~~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          234 IVPPDADVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             TSCTTCCTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             hcCCCCCHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            222346899999999999865532 234556664

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-39  Score=278.46  Aligned_cols=234  Identities=20%  Similarity=0.193  Sum_probs=200.2

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCC---CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHG---AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      .....++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++.+.+.++.++.+|+++.+++++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHH
Confidence            345567899999999999999999999999999   9999999998776543 344333568999999999999999999


Q ss_pred             HHHHHHcC--CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC------C-----CceE
Q 040531           84 NVTISKHG--RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR------R-----SGCI  150 (285)
Q Consensus        84 ~~i~~~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~i  150 (285)
                      +++.+.++  ++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|+++      +     .++|
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPK---SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCC---ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            99999988  89999999998642   2567888999999999999999999999999999765      3     6899


Q ss_pred             EEEcccccccCCC---CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          151 ISTASVASLMGGL---GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       151 i~vss~~~~~~~~---~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      |++||..+..+.+   +...|+++|+|++.+++.++.|++++||++++|+||+|+|++...                   
T Consensus       169 v~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------  229 (267)
T 1sny_A          169 INMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------  229 (267)
T ss_dssp             EEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------
T ss_pred             EEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------
Confidence            9999998877653   677899999999999999999999999999999999999998531                   


Q ss_pred             HHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          228 EKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                                    ....+|+++|+.+++++++...+++|+.+.+|||..
T Consensus       230 --------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 --------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             --------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             --------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                          123589999999999999888899999999999864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-39  Score=278.56  Aligned_cols=222  Identities=27%  Similarity=0.315  Sum_probs=196.9

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998888888877666778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus       106 ~g~iD~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  181 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYT----SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC  181 (272)
T ss_dssp             TCCCSEEEECCCCCCC----CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH
T ss_pred             CCCCcEEEECCCcCCC----cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHH
Confidence            9999999999998643    566778899999999999999999999999999888889999999999888777788999


Q ss_pred             hhHHHHHHHHHHHHHHhC---CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          170 VSKHAIVGLTKNTACELG---KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      ++|+|++.+++.++.|++   +.||+|++|+||+++|++....                            ..+.++..+
T Consensus       182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~----------------------------~~~~~~~~~  233 (272)
T 1yb1_A          182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----------------------------STSLGPTLE  233 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----------------------------HHHHCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc----------------------------cccccCCCC
Confidence            999999999999999996   6799999999999999884310                            012356789


Q ss_pred             HHHHHHHHHHHhcCCCC
Q 040531          247 ARDIAEAALYLASDESK  263 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~  263 (285)
                      |+|+|+.+++++.+...
T Consensus       234 ~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          234 PEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHHcCCC
Confidence            99999999999976543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-39  Score=279.59  Aligned_cols=227  Identities=25%  Similarity=0.280  Sum_probs=190.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCH-HHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLE-QDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~-~~i~~~~~~i   86 (285)
                      ++..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|+++. ++++++++.+
T Consensus         6 ~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            6 PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             ------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            4456789999999999999999999999999999999999999999888887654 4799999999998 9999999999


Q ss_pred             HHHcCCccEEEECCCCCCCC--------------------------CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHH
Q 040531           87 ISKHGRLDILFNNAGVLGNQ--------------------------SKHKSITDFDANEFDNIIRINVRGAALGMKYAAK  140 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (285)
                      .+.++++|+||||||+....                          ....++.+.+.++|++.+++|+.|++.++++++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            99999999999999986321                          0112456678999999999999999999999999


Q ss_pred             hhcCCCCceEEEEcccccccCC-------------------------------------------CCCccchhhHHHHHH
Q 040531          141 VMVPRRSGCIISTASVASLMGG-------------------------------------------LGPHAYTVSKHAIVG  177 (285)
Q Consensus       141 ~~~~~~~g~ii~vss~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~  177 (285)
                      .|++++.++||++||..+..+.                                           ++...|++||+|+++
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            9988888999999998876543                                           345789999999999


Q ss_pred             HHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHH
Q 040531          178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYL  257 (285)
Q Consensus       178 l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l  257 (285)
                      |++.++.|+++  |+||+|+||+|.|++.+...                                 ..+|++.++.++++
T Consensus       246 ~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~---------------------------------~~~~~~~a~~~~~~  290 (311)
T 3o26_A          246 YTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG---------------------------------NYTAEEGAEHVVRI  290 (311)
T ss_dssp             HHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC---------------------------------SBCHHHHHHHHHHH
T ss_pred             HHHHHHhhcCC--ceEEEecCCceecCCcCCCC---------------------------------CCCHHHHHHHHHHH
Confidence            99999999975  99999999999999865321                                 13789999999998


Q ss_pred             hcCCCCcccccEE
Q 040531          258 ASDESKYISGHNL  270 (285)
Q Consensus       258 ~s~~~~~~~G~~i  270 (285)
                      +.......+|..+
T Consensus       291 ~~~~~~~~~g~~~  303 (311)
T 3o26_A          291 ALFPDDGPSGFFY  303 (311)
T ss_dssp             HTCCSSCCCSCEE
T ss_pred             HhCCCCCCCceEe
Confidence            8655554455544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1e-40  Score=284.19  Aligned_cols=222  Identities=26%  Similarity=0.354  Sum_probs=174.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.            . +++|+++.++++++++++   ++++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999998765321            1 679999999988887632   378999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc----------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL----------------  159 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~----------------  159 (285)
                      ||||||+....           +.|++.+++|+.+++.++++++|.|++++.++||++||..+.                
T Consensus        66 lv~~Ag~~~~~-----------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  134 (257)
T 1fjh_A           66 LVLCAGLGPQT-----------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAG  134 (257)
T ss_dssp             EEECCCCCTTC-----------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred             EEECCCCCCCc-----------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhccc
Confidence            99999975310           128999999999999999999999988878999999999887                


Q ss_pred             ------------cCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          160 ------------MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       160 ------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  .+.++...|++||+|++.+++.++.|++++||+||+|+||+|+|++.......               
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------------  199 (257)
T 1fjh_A          135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD---------------  199 (257)
T ss_dssp             CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------
T ss_pred             chhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc---------------
Confidence                        34446779999999999999999999999999999999999999986543111               


Q ss_pred             HHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          228 EKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .........+..+.++..+|+|+|++++||+++.+.+++|+.|.+|||++.+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          200 PRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             ---------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             hhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            0001111111245677899999999999999999899999999999998653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.6e-39  Score=292.44  Aligned_cols=250  Identities=12%  Similarity=0.020  Sum_probs=201.8

Q ss_pred             CCCcEEEEecCCCchhHH--HHHHHHHCCCeEEEEecCchh------------hHHHHHHhhcCCCceEEEeccCCCHHH
Q 040531           13 LEGKIAIVTGGARGIGEA--TVRLFVKHGAKVVIADIDDAA------------GIALADSLLSSSPLVTYLHCDVSLEQD   78 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~--ia~~la~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~D~s~~~~   78 (285)
                      ..+|++|||||++|||++  ++++|+++|++|++++|+...            .+.+.+.+.+.+.++..+++|+++.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            689999999999999999  999999999999999987543            233344444556789999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCC---------CCCCCC---------------------CCCCHHHHHHHHHhhh
Q 040531           79 IQNLINVTISKHGRLDILFNNAGVLGNQ---------SKHKSI---------------------TDFDANEFDNIIRINV  128 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~n~  128 (285)
                      ++++++++.+++|++|+||||||.....         +...++                     .+.+.++|+..+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974100         011233                     4679999999999999


Q ss_pred             hhHH-HHHHHHHHhhcCCCCceEEEEcccccccCCCCC--ccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccch
Q 040531          129 RGAA-LGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATS  204 (285)
Q Consensus       129 ~~~~-~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~--~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~  204 (285)
                      .+.+ .+++++.+.+..++.|+||++||.++..+.|.+  ..|++||+|+++|+++||.|+++ +|||||+|+||+|.|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9998 778888776544557999999999999988888  99999999999999999999999 9999999999999999


Q ss_pred             hhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc-ccc
Q 040531          205 MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS-KNC  282 (285)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~-~~~  282 (285)
                      +......              .........    .++++..+||++++.+.||+++  .+.+|+.+.+|||..++ ..|
T Consensus       298 ~s~~ip~--------------~p~y~~~~~----~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~  356 (418)
T 4eue_A          298 ASAYIPT--------------FPLYAAILY----KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDL  356 (418)
T ss_dssp             HHHTSTT--------------HHHHHHHHH----HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTT
T ss_pred             hhhcCCC--------------CcHHHHHHH----HHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChh
Confidence            9765421              111111111    1344567999999999999988  56799999999865543 444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=8.6e-40  Score=288.11  Aligned_cols=249  Identities=19%  Similarity=0.199  Sum_probs=188.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh------cCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL------SSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~------~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+.      ..+.++.++++|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            47999999999999999999999999999888876554433332221      123678999999999999999999873


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                        ++++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....
T Consensus        81 --~g~iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~  154 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL----GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDV  154 (327)
T ss_dssp             --TSCCSEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHH
T ss_pred             --cCCCCEEEECCCcCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChH
Confidence              5899999999998543    5677889999999999999999999999999998777899999999999988888999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC-CC
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT-LK  246 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  246 (285)
                      |++||+|+++|+++++.|++++||+||+|+||+|+|++...........+..  ......+.+.........+.++. .+
T Consensus       155 Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (327)
T 1jtv_A          155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDR--TDIHTFHRFYQYLAHSKQVFREAAQN  232 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhcc--CCHHHHHHHHHHHHHHHHhhhhcCCC
Confidence            9999999999999999999999999999999999999975432110000000  00011111111111111122332 48


Q ss_pred             HHHHHHHHHHHhcC---CCCcccccEE
Q 040531          247 ARDIAEAALYLASD---ESKYISGHNL  270 (285)
Q Consensus       247 ~eeva~~~~~l~s~---~~~~~~G~~i  270 (285)
                      |+|+|+.++++++.   ...|++|+.+
T Consensus       233 pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          233 PEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence            99999999999864   4678888764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=6.9e-40  Score=277.41  Aligned_cols=226  Identities=24%  Similarity=0.239  Sum_probs=162.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|++|++|||||++|||++++++|++ |+.|++++|+.+.+++..+     ..++.++.+|+++.++ .+.+.+..+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~   73 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL   73 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence            468899999999999999999999998 9999999999888766554     2458899999998877 44444556678


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++
T Consensus        74 ~~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  148 (245)
T 3e9n_A           74 DHVDTLVHAAAVARD----TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAA  148 (245)
T ss_dssp             SCCSEEEECC--------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHH
T ss_pred             CCCCEEEECCCcCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHH
Confidence            899999999998654    5677889999999999999999999999999997654 99999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|++.|+++++.|++++||+||+|+||+|.|++........                 ..     ..+.+++.+|+|+
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----------------~~-----~~~~~~~~~p~dv  206 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ-----------------GT-----NFRPEIYIEPKEI  206 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh-----------------hc-----ccccccCCCHHHH
Confidence            9999999999999999999999999999999999876543210                 00     1233456799999


Q ss_pred             HHHHHHHhcCCCCcccccEEEec
Q 040531          251 AEAALYLASDESKYISGHNLVVD  273 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vd  273 (285)
                      |++++||++...   +|+.+++|
T Consensus       207 A~~i~~l~~~~~---~~~~~~i~  226 (245)
T 3e9n_A          207 ANAIRFVIDAGE---TTQITNVD  226 (245)
T ss_dssp             HHHHHHHHTSCT---TEEEEEEE
T ss_pred             HHHHHHHHcCCC---ccceeeeE
Confidence            999999997765   44555543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.1e-37  Score=267.35  Aligned_cols=222  Identities=25%  Similarity=0.280  Sum_probs=191.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVK-HGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++.+.+.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999 999999999999888888888876667899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCC-HHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC---------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFD-ANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG---------  161 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~---------  161 (285)
                      ++|+||||||....    .. ...+ .+++++.+++|+.+++.++++++|.|++  .++||++||..+..+         
T Consensus        82 ~id~li~~Ag~~~~----~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~  154 (276)
T 1wma_A           82 GLDVLVNNAGIAFK----VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQ  154 (276)
T ss_dssp             SEEEEEECCCCCCC----TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             CCCEEEECCccccc----CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHH
Confidence            99999999998643    12 2334 5889999999999999999999999864  489999999876532         


Q ss_pred             --------------------------------CCCCccchhhHHHHHHHHHHHHHHhCC----CCcEEEEEeCCCccchh
Q 040531          162 --------------------------------GLGPHAYTVSKHAIVGLTKNTACELGK----YGIRVNCISPFGVATSM  205 (285)
Q Consensus       162 --------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~----~~i~v~~v~pg~v~t~~  205 (285)
                                                      ..+...|++||+|++.+++.++.|+++    +||+|++|+||+|.|++
T Consensus       155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence                                            012378999999999999999999987    79999999999999988


Q ss_pred             hhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCC--CCcccccEEEecCC
Q 040531          206 LVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDE--SKYISGHNLVVDGG  275 (285)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~--~~~~~G~~i~vdgG  275 (285)
                      ...                                 .+..+|+|+|+.++||++.+  +.+++|+.|. |++
T Consensus       235 ~~~---------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          235 AGP---------------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             TCT---------------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             CCc---------------------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            532                                 12468999999999999854  4699999987 655

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=7.1e-37  Score=264.68  Aligned_cols=220  Identities=18%  Similarity=0.157  Sum_probs=189.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++|.++++++++++.+
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            345899999999999999999999999999999999999998888877765544 3689999999999999999999999


Q ss_pred             HcCCccEEEEC-CCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNN-AGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      .++++|+|||| +|...     .++.+.+.+++++.+++|+.+++.++++++|.|+++ .|+||++||..+..+.++...
T Consensus       103 ~~g~iD~li~naag~~~-----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  176 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTS-----LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAA  176 (286)
T ss_dssp             HHTSCSEEEECCCCCCC-----CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHH
T ss_pred             HcCCCCEEEECCccCCC-----CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccH
Confidence            99999999999 56542     234556899999999999999999999999998643 589999999999988899999


Q ss_pred             chhhHHHHHHHHHHHHHHh--CCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          168 YTVSKHAIVGLTKNTACEL--GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~--~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      |++||+|++.++++++.|+  .+.+|++++++||+++|++.......                          .......
T Consensus       177 Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--------------------------~~~~~~~  230 (286)
T 1xu9_A          177 YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG--------------------------IVHMQAA  230 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG--------------------------GGGGGCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc--------------------------cccCCCC
Confidence            9999999999999999999  67899999999999999987542211                          0011246


Q ss_pred             CHHHHHHHHHHHhcCC
Q 040531          246 KARDIAEAALYLASDE  261 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~  261 (285)
                      +|+++|+.++..+...
T Consensus       231 ~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          231 PKEECALEIIKGGALR  246 (286)
T ss_dssp             CHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhcC
Confidence            8999999999988553

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.2e-36  Score=308.87  Aligned_cols=244  Identities=18%  Similarity=0.206  Sum_probs=201.4

Q ss_pred             ccccCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhh----cCCCceEEEeccCCCHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARG-IGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLL----SSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~g-IG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~----~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ..++|+||++|||||++| ||+++|++|+++|++|+++ +|+.+.+.+..+++.    ..+.++.+++||++|.++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            445789999999999998 9999999999999999998 577777766665552    2356799999999999999999


Q ss_pred             HHHHHHH-----cC-CccEEEECCCCCCCCCCCC-CCCCCC--HHHHHHHHHhhhhhHHHHHHHH--HHhhcCCCCceEE
Q 040531           83 INVTISK-----HG-RLDILFNNAGVLGNQSKHK-SITDFD--ANEFDNIIRINVRGAALGMKYA--AKVMVPRRSGCII  151 (285)
Q Consensus        83 ~~~i~~~-----~~-~id~lv~~ag~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~g~ii  151 (285)
                      ++++.+.     +| ++|+||||||+...    . ++.+.+  .++|+++|++|+.+++.+++.+  +|.|.+++.|+||
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~----~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IV  824 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQ----GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  824 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCC----SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCC----CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEE
Confidence            9999988     66 99999999998643    4 677888  8999999999999999999988  7888877779999


Q ss_pred             EEcccccccCCCCCccchhhHHHHHHH-HHHHHHHhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHH
Q 040531          152 STASVASLMGGLGPHAYTVSKHAIVGL-TKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       152 ~vss~~~~~~~~~~~~Y~asKaa~~~l-~~~la~e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      ++||..+..+  +...|++||+|+++| ++.++.|++++ |+||+|+||+|+ |+|....  .            ..   
T Consensus       825 nISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~--~------------~~---  884 (1887)
T 2uv8_A          825 PMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--N------------II---  884 (1887)
T ss_dssp             EECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C--C------------TT---
T ss_pred             EEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc--h------------hH---
Confidence            9999988776  677999999999999 99999999988 999999999999 7875421  0            00   


Q ss_pred             HHHHHhhhhcccCCCCCHHHHHHHHHHHhcCC-CCcccccEEEec--CCccccc
Q 040531          230 MEELVRGLANLKGVTLKARDIAEAALYLASDE-SKYISGHNLVVD--GGFTTSK  280 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~-~~~~~G~~i~vd--gG~~~~~  280 (285)
                       ......  .+. +..+|+|+|+.++||+++. +.+++|+.|.+|  ||+....
T Consensus       885 -~~~~~~--~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          885 -AEGIEK--MGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             -HHHHHT--TSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             -HHHHHh--cCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence             111111  122 5669999999999999998 789999999875  9987643

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.2e-35  Score=300.87  Aligned_cols=243  Identities=19%  Similarity=0.204  Sum_probs=200.4

Q ss_pred             ccccCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHh----hcCCCceEEEeccCCCHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARG-IGEATVRLFVKHGAKVVIAD-IDDAAGIALADSL----LSSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~g-IG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~----~~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      +.++|+||++|||||++| ||+++|++|+++|++|++++ |+.+.+.+..+++    ...+.++.++.||++|.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            345789999999999999 99999999999999999995 6666665555444    22356799999999999999999


Q ss_pred             HHHHHHH---cC-CccEEEECCCCCCCCCCCC-CCCCCC--HHHHHHHHHhhhhhHHHHHHH--HHHhhcCCCCceEEEE
Q 040531           83 INVTISK---HG-RLDILFNNAGVLGNQSKHK-SITDFD--ANEFDNIIRINVRGAALGMKY--AAKVMVPRRSGCIIST  153 (285)
Q Consensus        83 ~~~i~~~---~~-~id~lv~~ag~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~g~ii~v  153 (285)
                      ++++.+.   +| ++|+||||||+...    . ++.+.+  .++|++.|++|+.+++.+++.  +++.|.+++.|+||++
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~----~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnI  801 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPEN----GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPL  801 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCT----TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEE
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccC----CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEE
Confidence            9999988   88 99999999998643    4 678888  899999999999999999877  7788877777999999


Q ss_pred             cccccccCCCCCccchhhHHHHHHHHHHHHH-HhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHHHH
Q 040531          154 ASVASLMGGLGPHAYTVSKHAIVGLTKNTAC-ELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEKME  231 (285)
Q Consensus       154 ss~~~~~~~~~~~~Y~asKaa~~~l~~~la~-e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      ||..+..+  +...|++||+|+++|++.++. |++++ |+||+|+||+++ |+|....                  +...
T Consensus       802 SS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~------------------~~~~  860 (1878)
T 2uv9_A          802 SPNHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN------------------NLVA  860 (1878)
T ss_dssp             CSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH------------------HHTH
T ss_pred             cchhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc------------------hhhH
Confidence            99988776  467899999999999987655 57877 999999999999 9885421                  0111


Q ss_pred             HHHhhhhcccCCCCCHHHHHHHHHHHhcCCC-CcccccEEEe--cCCcccc
Q 040531          232 ELVRGLANLKGVTLKARDIAEAALYLASDES-KYISGHNLVV--DGGFTTS  279 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~-~~~~G~~i~v--dgG~~~~  279 (285)
                      .....  .+. +..+|+|+|+.++||+++.+ +++||+.+.+  |||++..
T Consensus       861 ~~~~~--~pl-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          861 EGVEK--LGV-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHT--TTC-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHh--cCC-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            11221  122 45699999999999999987 8999999987  5998765

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-37  Score=304.29  Aligned_cols=244  Identities=18%  Similarity=0.207  Sum_probs=202.5

Q ss_pred             ccccCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEE-ecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARG-IGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~g-IG~~ia~~la~~g~~v~~~-~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~   82 (285)
                      +.++|++|++|||||++| ||+++|++|+++|++|+++ +|+.+.+.+..+++.+.    +.++.+++||++|.++++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            445789999999999998 9999999999999999998 57777766666666332    45789999999999999999


Q ss_pred             HHHHHHH-----cC-CccEEEECCCCCCCCCCCC-CCCCCC--HHHHHHHHHhhhhhHHHHHHHH--HHhhcCCCCceEE
Q 040531           83 INVTISK-----HG-RLDILFNNAGVLGNQSKHK-SITDFD--ANEFDNIIRINVRGAALGMKYA--AKVMVPRRSGCII  151 (285)
Q Consensus        83 ~~~i~~~-----~~-~id~lv~~ag~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~g~ii  151 (285)
                      ++++.+.     +| ++|+||||||+...    . ++.+.+  .++|++.+++|+.+++.+++.+  +|.|++++.|+||
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~----g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIV  625 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQ----GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  625 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCC----SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCC----CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEE
Confidence            9999988     77 89999999998643    4 677788  8999999999999999999998  8889877779999


Q ss_pred             EEcccccccCCCCCccchhhHHHHHHH-HHHHHHHhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHH
Q 040531          152 STASVASLMGGLGPHAYTVSKHAIVGL-TKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       152 ~vss~~~~~~~~~~~~Y~asKaa~~~l-~~~la~e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      ++||..+..+  +...|++||+|+++| .+.++.|++++ |+||+|+||+|+ |++.......     .           
T Consensus       626 nISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~-----~-----------  686 (1688)
T 2pff_A          626 PMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNII-----A-----------  686 (1688)
T ss_dssp             CCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTC-----S-----------
T ss_pred             EEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHH-----H-----------
Confidence            9999988776  667999999999999 88889999887 999999999999 7875421000     0           


Q ss_pred             HHHHHhhhhcccCCCCCHHHHHHHHHHHhcCC-CCcccccEEEec--CCccccc
Q 040531          230 MEELVRGLANLKGVTLKARDIAEAALYLASDE-SKYISGHNLVVD--GGFTTSK  280 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~-~~~~~G~~i~vd--gG~~~~~  280 (285)
                        ....  ..+. +..+|+|+|+.++||+++. +.+++|+.+.+|  ||+....
T Consensus       687 --~~l~--~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          687 --EGIE--KMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             --TTTS--SSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             --HHHH--hCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence              0000  0122 4569999999999999998 789999999876  9987643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=7.2e-35  Score=239.25  Aligned_cols=198  Identities=16%  Similarity=0.160  Sum_probs=173.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||++|||++++++|+ +|++|++++|+.+                 .+.+|+++.++++++++.+    +++|+|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            79999999999999999999 9999999999764                 3789999999999988764    789999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV  176 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~  176 (285)
                      |||||....    .++.+.+.++|++.+++|+.+++.+++++.+.|.+  .++||++||..+..+.++...|+++|++++
T Consensus        63 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           63 VSATGSATF----SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EECCCCCCC----CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EECCCCCCC----CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            999997543    56778899999999999999999999999999854  489999999988888888999999999999


Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHH
Q 040531          177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALY  256 (285)
Q Consensus       177 ~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~  256 (285)
                      .+++.++.|+ ++||++++++||++.|++....  .                         ..+..+.++|+|+|+++++
T Consensus       137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~--~-------------------------~~~~~~~~~~~dva~~~~~  188 (202)
T 3d7l_A          137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDKLE--P-------------------------FFEGFLPVPAAKVARAFEK  188 (202)
T ss_dssp             HHHHHHTTSC-STTCEEEEEEECCBGGGHHHHG--G-------------------------GSTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHc-cCCeEEEEEecCccCCchhhhh--h-------------------------hccccCCCCHHHHHHHHHH
Confidence            9999999999 7899999999999999874311  0                         1233456899999999998


Q ss_pred             HhcCCCCcccccEEEec
Q 040531          257 LASDESKYISGHNLVVD  273 (285)
Q Consensus       257 l~s~~~~~~~G~~i~vd  273 (285)
                      +++   .+++|+.+++|
T Consensus       189 ~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          189 SVF---GAQTGESYQVY  202 (202)
T ss_dssp             HHH---SCCCSCEEEEC
T ss_pred             hhh---ccccCceEecC
Confidence            883   56899999987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=5.5e-35  Score=247.91  Aligned_cols=222  Identities=26%  Similarity=0.317  Sum_probs=181.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||+||||++++++|+++|++|++++|+.+..+.             .+.+|+++.++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            589999999999999999999999999999998765321             1678999999998887744   368999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-------------  162 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-------------  162 (285)
                      ||||||....           .+.+++.+++|+.+++.+++++.+.|++++.++||++||..+..+.             
T Consensus        66 vi~~Ag~~~~-----------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  134 (255)
T 2dkn_A           66 LVCCAGVGVT-----------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAG  134 (255)
T ss_dssp             EEECCCCCTT-----------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred             EEECCCCCCc-----------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhccc
Confidence            9999997531           1237889999999999999999999987777999999998887654             


Q ss_pred             -------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          163 -------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       163 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                   ++...|+++|++++.+++.++.+++++||++++++||.+.|++.......           ...   
T Consensus       135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~-----------~~~---  200 (255)
T 2dkn_A          135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD-----------PRY---  200 (255)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC-----------TTT---
T ss_pred             chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc-----------hhh---
Confidence                         45678999999999999999999988899999999999999987653221           000   


Q ss_pred             HHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                       .........+.+++++|+|+|+++++++++.+.+++|+.+++|||+..+
T Consensus       201 -~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          201 -GESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             -HHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             -HHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence             1111111004567889999999999999988888999999999998764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=4.3e-34  Score=235.29  Aligned_cols=201  Identities=20%  Similarity=0.224  Sum_probs=170.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||++++++|+++  +|++++|+.+.++...+++..     .++++|++|.+++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            58999999999999999999998  999999998887777666531     7889999999999998876    689999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      ||||||....    .++.+.+.++|++.+++|+.+++.+++++    ++++.++||++||..+..+.++...|+++|+++
T Consensus        70 vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  141 (207)
T 2yut_A           70 LVHAVGKAGR----ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGAL  141 (207)
T ss_dssp             EEECCCCCCC----BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHH
T ss_pred             EEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHH
Confidence            9999998643    56777889999999999999999999987    334568999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAAL  255 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~  255 (285)
                      +.+++.++.|++++||++++++||++.|++....                            ..+..+.++|+|+|++++
T Consensus       142 ~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~----------------------------~~~~~~~~~~~dva~~~~  193 (207)
T 2yut_A          142 EAYLEAARKELLREGVHLVLVRLPAVATGLWAPL----------------------------GGPPKGALSPEEAARKVL  193 (207)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGG----------------------------TSCCTTCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCCEEEEEecCcccCCCcccc----------------------------CCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999984321                            123456789999999999


Q ss_pred             HHhcCCCC
Q 040531          256 YLASDESK  263 (285)
Q Consensus       256 ~l~s~~~~  263 (285)
                      +++++...
T Consensus       194 ~~~~~~~~  201 (207)
T 2yut_A          194 EGLFREPV  201 (207)
T ss_dssp             HHHC--CC
T ss_pred             HHHhCCCC
Confidence            99977653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=9.6e-33  Score=256.75  Aligned_cols=219  Identities=16%  Similarity=0.184  Sum_probs=182.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEE-ecC-------------chhhHHHHHHhhcCCCceEEEeccCCCHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIA-DID-------------DAAGIALADSLLSSSPLVTYLHCDVSLEQD   78 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~-~r~-------------~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~   78 (285)
                      +++++|||||++|||++++++|+++|+. |+++ +|+             .+..+++.+++.+.+.++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            6899999999999999999999999998 7777 888             355667777777677889999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccc
Q 040531           79 IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVA  157 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~  157 (285)
                      ++++++++. +++++|+||||||+...    .++.+.+.++|++.|++|+.|++++.+.+.+.+++++ .++||++||..
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~----~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a  404 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDS----EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVA  404 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCC----CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGG
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHH
Confidence            999999988 78999999999999754    6788999999999999999999999999999997766 78999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          158 SLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       158 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      +..+.++...|+++|+++++|+    .+++.+||++++|+||+++|+|....               ...+.+    .  
T Consensus       405 ~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~---------------~~~~~~----~--  459 (525)
T 3qp9_A          405 AIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG---------------ATGERL----R--  459 (525)
T ss_dssp             GTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS---------------HHHHHH----H--
T ss_pred             HcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch---------------hhHHHH----H--
Confidence            9999999999999999999874    56778899999999999999987421               111111    1  


Q ss_pred             hcccCCCCCHHHHHHHHHHHhcCCCC
Q 040531          238 ANLKGVTLKARDIAEAALYLASDESK  263 (285)
Q Consensus       238 ~~~~~~~~~~eeva~~~~~l~s~~~~  263 (285)
                       ......++|+++++.+.++++....
T Consensus       460 -~~g~~~l~pee~a~~l~~~l~~~~~  484 (525)
T 3qp9_A          460 -RLGLRPLAPATALTALDTALGHGDT  484 (525)
T ss_dssp             -HTTBCCBCHHHHHHHHHHHHHHTCS
T ss_pred             -hcCCCCCCHHHHHHHHHHHHhCCCC
Confidence             1122457999999999999976543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=7.1e-32  Score=285.46  Aligned_cols=243  Identities=17%  Similarity=0.132  Sum_probs=183.4

Q ss_pred             cCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEecCchh-----hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARG-IGEATVRLFVKHGAKVVIADIDDAA-----GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        12 ~l~~k~vlItGas~g-IG~~ia~~la~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .|+||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+.++..++||+++.+++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     6666677766667899999999999999999999


Q ss_pred             HHH----HcCCccEEEECCCCCCC-CCCCCCCCCCCHHH----HHHHHHhhhhhHHHHHHHHHHhhcCCCCc---e-EEE
Q 040531           86 TIS----KHGRLDILFNNAGVLGN-QSKHKSITDFDANE----FDNIIRINVRGAALGMKYAAKVMVPRRSG---C-IIS  152 (285)
Q Consensus        86 i~~----~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~-ii~  152 (285)
                      +.+    .+|++|+||||||+... .+...+..+.+.++    ++..+++|+.+++.+++.+.+.|..++.+   . ++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            988    89999999999997210 00001222223333    45559999999999999999999765532   2 333


Q ss_pred             EcccccccCCCCCccchhhHHHHHHHHHHHHHH--hCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHH
Q 040531          153 TASVASLMGGLGPHAYTVSKHAIVGLTKNTACE--LGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       153 vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e--~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .++..+  ..++...|++||+|+++|+|+||.|  +++ +|+||+++||+|. |++....              ...   
T Consensus      2293 ~ss~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~--------------~~~--- 2352 (3089)
T 3zen_D         2293 GSPNRG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN--------------DAI--- 2352 (3089)
T ss_dssp             ECSSTT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT--------------TTT---
T ss_pred             CCcccc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc--------------hhH---
Confidence            333222  2334568999999999999999999  775 5999999999998 6654321              000   


Q ss_pred             HHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcc-cccEEEec--CCccc
Q 040531          230 MEELVRGLANLKGVTLKARDIAEAALYLASDESKYI-SGHNLVVD--GGFTT  278 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~-~G~~i~vd--gG~~~  278 (285)
                       .+....  .+ .+..+|+|+|.+++||+|+.+.++ +|+.+.+|  ||+..
T Consensus      2353 -~~~~~~--~~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2353 -VSAVEE--AG-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             -HHHHGG--GS-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             -HHHHHh--cC-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence             111111  12 234599999999999999987766 55667766  99865

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=9.5e-30  Score=246.95  Aligned_cols=218  Identities=16%  Similarity=0.243  Sum_probs=177.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHH-HCCCe-EEEEecC---chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFV-KHGAK-VVIADID---DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la-~~g~~-v~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ++|++|||||++|||+++|++|+ ++|++ |++++|+   .+..+++.+++.+.+.++.+++||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 79995 9999998   5566777788877788999999999999999999999887


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .+ +||+||||||+...    .++.+++.++|++.+++|+.|++++.+++.|.|      +||++||..+..+.++.+.|
T Consensus       609 ~~-~id~lVnnAGv~~~----~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~Y  677 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD----GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNY  677 (795)
T ss_dssp             TS-CEEEEEECCCCCCC----CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHH
T ss_pred             hC-CCEEEEECCCcCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHH
Confidence            76 99999999999754    678899999999999999999999999987766      79999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+    |+++|+++++++||++|+|+||++.|++......                +........  .... .++++
T Consensus       678 aAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~----------------~~~~~~~~~--~g~~-~l~~~  734 (795)
T 3slk_A          678 AAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLR----------------EAEQDRLAR--SGLL-PISTE  734 (795)
T ss_dssp             HHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH----------------HHHHHHHHH--TTBC-CCCHH
T ss_pred             HHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhcccc----------------HHHHHHHHh--cCCC-CCCHH
Confidence            99996    6666667777789999999999999875432211                111111111  1222 35778


Q ss_pred             HHHHHHHHHhcCCCCcc
Q 040531          249 DIAEAALYLASDESKYI  265 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~  265 (285)
                      +..+.+..++......+
T Consensus       735 e~~~~~~~~l~~~~~~~  751 (795)
T 3slk_A          735 EGLSQFDAACGGAHTVV  751 (795)
T ss_dssp             HHHHHHHHHHTSSCSSC
T ss_pred             HHHHHHHHHHhCCCcEE
Confidence            88777777665544333

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=2.5e-29  Score=231.49  Aligned_cols=215  Identities=19%  Similarity=0.268  Sum_probs=173.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD---AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++|||||++|||++++++|+++|+ .|++++|+.   +..+++.+++.+.+.++.++.||++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999998 788899864   3456666777777889999999999999999999988776 


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +++|+||||||+....   .++.+.+.++|++.|++|+.+++++.+.+.+.    ..++||++||..+..+.++...|++
T Consensus       318 g~ld~vVh~AGv~~~~---~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaA  390 (496)
T 3mje_A          318 APLTAVFHSAGVAHDD---APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAA  390 (496)
T ss_dssp             SCEEEEEECCCCCCSC---CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHH
T ss_pred             CCCeEEEECCcccCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHH
Confidence            7899999999986222   67889999999999999999999999877553    4678999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|++++.|++.++    .+||++++|+||++.++......                 +....+.+    .....++|++.
T Consensus       391 aKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~-----------------~~~~~l~~----~g~~~l~pe~~  445 (496)
T 3mje_A          391 ANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDP-----------------EVHDRLVR----QGVLAMEPEHA  445 (496)
T ss_dssp             HHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC-----------------------CHHHHH----TTEEEECHHHH
T ss_pred             HHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccCh-----------------HHHHHHHh----cCCCCCCHHHH
Confidence            9999999887654    46999999999998765422110                 00011111    11123589999


Q ss_pred             HHHHHHHhcCCC
Q 040531          251 AEAALYLASDES  262 (285)
Q Consensus       251 a~~~~~l~s~~~  262 (285)
                      ++.+.+++....
T Consensus       446 ~~~l~~~l~~~~  457 (496)
T 3mje_A          446 LGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCC
Confidence            999999886654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=3.6e-28  Score=204.08  Aligned_cols=209  Identities=15%  Similarity=0.140  Sum_probs=159.7

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCce-EEEeccCCCHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLV-TYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~s~~~~i~~~~~   84 (285)
                      +...+.+|++|++|||||+|+||++++++|+++|++|++++|+.+..+++.+      .++ .++++|++         +
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~   76 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------E   76 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------S
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------H
Confidence            3344567899999999999999999999999999999999999888765543      257 88999998         2


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--  162 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--  162 (285)
                      .+.+.++.+|+||||||...            .+++++.+++|+.++..+++++.+    .+.++||++||.++..+.  
T Consensus        77 ~~~~~~~~~D~vi~~ag~~~------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~  140 (236)
T 3e8x_A           77 DFSHAFASIDAVVFAAGSGP------------HTGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQG  140 (236)
T ss_dssp             CCGGGGTTCSEEEECCCCCT------------TSCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGS
T ss_pred             HHHHHHcCCCEEEECCCCCC------------CCCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCC
Confidence            34455678999999999742            134788999999999999999854    346799999998776554  


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          163 -LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       163 -~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                       +....|+.+|++++.+++       ..++++++++||.+.++.....+....                     . ....
T Consensus       141 ~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~---------------------~-~~~~  191 (236)
T 3e8x_A          141 PMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP---------------------H-FSEI  191 (236)
T ss_dssp             CGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES---------------------S-CSCC
T ss_pred             hhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc---------------------C-CCcc
Confidence             456789999999999886       368999999999999986543222100                     0 0112


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ...+.++|+|+++++++++..  ..|+.+++++|.
T Consensus       192 ~~~i~~~Dva~~~~~~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          192 TRSITRHDVAKVIAELVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             CCCEEHHHHHHHHHHHTTCGG--GTTEEEEEEECS
T ss_pred             cCcEeHHHHHHHHHHHhcCcc--ccCCeEEEeCCC
Confidence            456799999999999997754  789999998884

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=1.1e-27  Score=221.10  Aligned_cols=213  Identities=17%  Similarity=0.233  Sum_probs=171.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCch---hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDA---AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++|||||++|||++++++|+++|+. |++++|+..   ..+++.+++.+.+.++.++.||++|.+++.++++.+ +.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            6899999999999999999999999996 999999875   345666666666778999999999999999999988 56


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++++|+||||||+...    .++.+.+.++|++.+++|+.+++++.+.+.+    .+.++||++||..+..+.++...|+
T Consensus       304 ~g~ld~VIh~AG~~~~----~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Ya  375 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDD----GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYA  375 (486)
T ss_dssp             TSCEEEEEECCCCCCC----CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTH
T ss_pred             cCCCcEEEECCccCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHH
Confidence            7899999999998654    5778899999999999999999999987643    3568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch-hhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS-MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++|++++.|++.++    .+|+++++|+||++.++ |.....                    ..   .+.......++|+
T Consensus       376 aaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~--------------------~~---~~~~~g~~~i~~e  428 (486)
T 2fr1_A          376 PGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV--------------------AD---RFRRHGVIEMPPE  428 (486)
T ss_dssp             HHHHHHHHHHHHHH----HTTCCCEEEEECCBC-----------------------------------CTTTTEECBCHH
T ss_pred             HHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH--------------------HH---HHHhcCCCCCCHH
Confidence            99999999876554    45899999999999886 432110                    00   0001111357999


Q ss_pred             HHHHHHHHHhcCCC
Q 040531          249 DIAEAALYLASDES  262 (285)
Q Consensus       249 eva~~~~~l~s~~~  262 (285)
                      ++++.+..++....
T Consensus       429 ~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          429 TACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999886543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=1.8e-26  Score=213.88  Aligned_cols=210  Identities=21%  Similarity=0.295  Sum_probs=171.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCch---hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDA---AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..+++.+++.+.+.++.++.||++|.++++++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            589999999999999999999999999 5999999864   34566667766677899999999999999998875    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                       +++|+||||||+...    .++.+.+.++|+..+++|+.+++++.+.+.+.   .+.++||++||..+..+.++...|+
T Consensus       334 -~~ld~VVh~AGv~~~----~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Ya  405 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDD----AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYA  405 (511)
T ss_dssp             -SCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHH
T ss_pred             -CCCcEEEECCcccCC----cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHH
Confidence             689999999998754    56778899999999999999999998875321   1468999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCc-cchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGV-ATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++|++++.|++.++    ..|+++++|+||++ +|+|.....                ...+.   .    .....++|+
T Consensus       406 aaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~----------------~~~~~---~----~g~~~l~~e  458 (511)
T 2z5l_A          406 AANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAG----------------EESLS---R----RGLRAMDPD  458 (511)
T ss_dssp             HHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHH----------------HHHHH---H----HTBCCBCHH
T ss_pred             HHHHHHHHHHHHHH----HcCCcEEEEECCcccCCccccccc----------------HHHHH---h----cCCCCCCHH
Confidence            99999999998653    56899999999999 777753210                01111   1    112357999


Q ss_pred             HHHHHHHHHhcCCC
Q 040531          249 DIAEAALYLASDES  262 (285)
Q Consensus       249 eva~~~~~l~s~~~  262 (285)
                      ++++.+..++....
T Consensus       459 ~~a~~l~~al~~~~  472 (511)
T 2z5l_A          459 AAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999886543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=1.4e-26  Score=198.04  Aligned_cols=184  Identities=15%  Similarity=0.120  Sum_probs=150.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++|++|||||+||||++++++|+++|++|++++|+.....         ..++.++.+|++|.+++.++++       .
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~   64 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------G   64 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------C
Confidence            35689999999999999999999999999999999876532         4578999999999999988876       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc------------c
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL------------M  160 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~------------~  160 (285)
                      +|+||||||..            +.+.|++.+++|+.+++.+++++.+    ++.++||++||..+.            .
T Consensus        65 ~D~vi~~Ag~~------------~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~  128 (267)
T 3rft_A           65 CDGIVHLGGIS------------VEKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDV  128 (267)
T ss_dssp             CSEEEECCSCC------------SCCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTS
T ss_pred             CCEEEECCCCc------------CcCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCC
Confidence            99999999973            2234788999999999999999844    456899999998776            2


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      +.++...|+.||++.+.+++.++.++   ++++++|+||.+.++......                              
T Consensus       129 ~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~------------------------------  175 (267)
T 3rft_A          129 PARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM------------------------------  175 (267)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH------------------------------
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc------------------------------
Confidence            33456789999999999999999885   688999999999886532110                              


Q ss_pred             cCCCCCHHHHHHHHHHHhcCC
Q 040531          241 KGVTLKARDIAEAALYLASDE  261 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~  261 (285)
                      ...++.++++++.+..++.++
T Consensus       176 ~~~~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          176 LSTWFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             HHHBCCHHHHHHHHHHHHHCS
T ss_pred             eeeEEcHHHHHHHHHHHHhCC
Confidence            011357899999988888654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=2.6e-25  Score=184.76  Aligned_cols=193  Identities=9%  Similarity=0.044  Sum_probs=146.9

Q ss_pred             cEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFV-KHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      |+++||||+|+||++++++|+ ++|++|++++|+.+ .++++.    +...++.++++|++|.+++.++++       .+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            789999999999999999999 89999999999987 655443    235678999999999999888765       68


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc-------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-------  166 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~-------  166 (285)
                      |+||||||..                       |+.     .+.+++.+++.+.++||++||..+..+.+...       
T Consensus        75 d~vv~~ag~~-----------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~  126 (221)
T 3r6d_A           75 EVVFVGAMES-----------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDN  126 (221)
T ss_dssp             SEEEESCCCC-----------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHT
T ss_pred             CEEEEcCCCC-----------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccc
Confidence            9999999841                       222     67777777777778999999988776555433       


Q ss_pred             ---cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          167 ---AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       167 ---~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                         .|+.+|.+++.+++.       .++++++|+||++.++.....+.....                     .....+.
T Consensus       127 ~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~---------------------~~~~~~~  178 (221)
T 3r6d_A          127 LPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPE---------------------GAQFNDA  178 (221)
T ss_dssp             SCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECT---------------------TSCCCCC
T ss_pred             cccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccC---------------------CccCCCc
Confidence               899999999988764       589999999999988732211111000                     0012233


Q ss_pred             CCCHHHHHHHHHHHh--cCCCCcccccEEEecCC
Q 040531          244 TLKARDIAEAALYLA--SDESKYISGHNLVVDGG  275 (285)
Q Consensus       244 ~~~~eeva~~~~~l~--s~~~~~~~G~~i~vdgG  275 (285)
                      .++++|+|+++++++  ++++.++++.....+.+
T Consensus       179 ~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          179 QVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             EEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             eeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            678999999999999  88877766555444444

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.93  E-value=6.1e-25  Score=194.12  Aligned_cols=229  Identities=16%  Similarity=0.106  Sum_probs=167.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+.. ..++.++.+|++|.+++.++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            5799999999999999999999999999999853 222233333432 346889999999999998887752     699


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc--------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM--------------  160 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~--------------  160 (285)
                      +|||+||....        +.+.+++++.+++|+.++..+++++.+...   .++||++||...+.              
T Consensus        76 ~vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~  144 (347)
T 1orr_A           76 SCFHLAGQVAM--------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRY  144 (347)
T ss_dssp             EEEECCCCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred             EEEECCcccCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccc
Confidence            99999996421        123456788999999999999999988763   26899999976432              


Q ss_pred             -------------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          161 -------------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       161 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                   +.++...|+.+|++.+.+++.++.++   ++++++++||.|.++........           ....
T Consensus       145 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~-----------~~~~  210 (347)
T 1orr_A          145 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQ-----------GWVG  210 (347)
T ss_dssp             EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTB-----------CHHH
T ss_pred             cccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcC-----------cHHH
Confidence                         12245689999999999999999885   79999999999999864321000           0111


Q ss_pred             HHHHHHHhhh-----hc-ccC------CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          228 EKMEELVRGL-----AN-LKG------VTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       228 ~~~~~~~~~~-----~~-~~~------~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ..+.......     .. ..+      .++.++|+|+++++++.. ....+|+.++++||.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          211 WFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             HHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            1122222211     00 111      256899999999999864 235689999999986

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=7e-25  Score=193.44  Aligned_cols=242  Identities=15%  Similarity=0.089  Sum_probs=171.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .++++|||||+|+||++++++|+++|++|++++|+.+...+..+.+.+ .+.++.++++|++|.+++.++++.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            468999999999999999999999999999999987766655555433 245789999999999999988774     47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------  161 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------  161 (285)
                      +|+||||||....        ....+...+.+++|+.++..+++++..    .+.++||++||...+..           
T Consensus        79 ~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~  146 (341)
T 3enk_A           79 ITAAIHFAALKAV--------GESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFP  146 (341)
T ss_dssp             CCEEEECCCCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSC
T ss_pred             CcEEEECcccccc--------CccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCC
Confidence            9999999997532        112344567899999999988887643    45679999999765421           


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc--
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN--  239 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  239 (285)
                      ..+...|+.+|++.+.+++.++.++.  ++++.+++|+.+.+|.....+....    ........ ..+.........  
T Consensus       147 ~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~----~~~~~~~~-~~~~~~~~~~~~~~  219 (341)
T 3enk_A          147 LSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDP----AGIPNNLM-PYVAQVAVGKLEKL  219 (341)
T ss_dssp             CBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCC----SSSCSSHH-HHHHHHHHTSSSCE
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCc----ccCccchH-HHHHHHHhcCCCce
Confidence            12346899999999999999999864  5999999999998875322211100    00000111 111111111000  


Q ss_pred             -------------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          240 -------------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       240 -------------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                                   ....++.++|+|+++++++........|+.+++.+|...+
T Consensus       220 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  272 (341)
T 3enk_A          220 RVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS  272 (341)
T ss_dssp             EEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred             EEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence                         1112567899999999998653334579999999887543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=5.7e-25  Score=192.44  Aligned_cols=222  Identities=16%  Similarity=0.087  Sum_probs=165.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ...+.+++|||||+|+||++++++|+++|++|++++|+.+. ..    +     ++.++.+|++|.+++.++++.     
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence            34578899999999999999999999999999999998654 11    1     578899999999999888764     


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--------  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--------  162 (285)
                      +++|+|||+||....        +.+.+++++.+++|+.++..+++++ +.+  ++.++||++||...+.+.        
T Consensus        73 ~~~d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~  141 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSV--------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVS  141 (321)
T ss_dssp             HCCSEEEECCSCCCH--------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBC
T ss_pred             cCCCEEEEcCcccch--------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCC
Confidence            369999999997421        1123457889999999999999998 555  246899999998654322        


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh--
Q 040531          163 -----LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR--  235 (285)
Q Consensus       163 -----~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  235 (285)
                           ++...|+.+|++.+.+++.++.++   |+++++++||.+.+|.....              ............  
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~--------------~~~~~~~~~~~~~~  204 (321)
T 2pk3_A          142 EENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLG--------------FVTQDFAKQIVDIE  204 (321)
T ss_dssp             TTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTT--------------SHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCC--------------chHHHHHHHHHHHh
Confidence                 346789999999999999999874   79999999999998864321              001111111111  


Q ss_pred             -h----hh-----cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          236 -G----LA-----NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       236 -~----~~-----~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                       +    ..     .....++.++|+|+++++++++.   .+|+.+++++|...
T Consensus       205 ~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          205 MEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             TTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             cCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence             1    00     01223578999999999999765   47899999998654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=6.2e-25  Score=193.55  Aligned_cols=233  Identities=17%  Similarity=0.087  Sum_probs=169.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEE-eccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYL-HCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~-~~D~s~~~~i~~~~~~i   86 (285)
                      +...++++++|||||+|+||++++++|+++|++|++++|+.+....+.+.+.. .+.++.++ .+|++|.++++++++  
T Consensus         5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   82 (342)
T 1y1p_A            5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred             cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--
Confidence            34457899999999999999999999999999999999988776655544432 13568888 899999888776653  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-CCC--
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-GGL--  163 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~~~--  163 (285)
                           .+|+|||+||....    .       +++.+.+++|+.++..+++++.+.   .+.++||++||..... +.+  
T Consensus        83 -----~~d~vih~A~~~~~----~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~  143 (342)
T 1y1p_A           83 -----GAAGVAHIASVVSF----S-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNV  143 (342)
T ss_dssp             -----TCSEEEECCCCCSC----C-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTC
T ss_pred             -----CCCEEEEeCCCCCC----C-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCC
Confidence                 69999999997532    1       235678999999999999998652   3457999999986652 211  


Q ss_pred             ----------------------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhccccc
Q 040531          164 ----------------------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCED  215 (285)
Q Consensus       164 ----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~  215 (285)
                                                  +...|+.+|++.+.+++.++.+++. ++++++++||.+.++........   
T Consensus       144 ~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~---  219 (342)
T 1y1p_A          144 EGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQS---  219 (342)
T ss_dssp             CCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCC---
T ss_pred             CCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCC---
Confidence                                        2357999999999999999999876 89999999999999864321100   


Q ss_pred             ccCCCCCchHHHHHHHHHHhhh-----h-cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          216 CMDSGKPCEEEEEKMEELVRGL-----A-NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                              ......+.....+.     . .....++.++|+|+++++++...  ..+|+.+.++|+.
T Consensus       220 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~~  276 (342)
T 1y1p_A          220 --------GSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAGT  276 (342)
T ss_dssp             --------CHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCEE
T ss_pred             --------ccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCCC
Confidence                    01111111111110     0 02234678999999999998653  4578777677653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=3.3e-25  Score=194.58  Aligned_cols=249  Identities=11%  Similarity=0.017  Sum_probs=180.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCchh------------hHHHHHHhhcCCCceEEEeccCCCHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFV-KHGAKVVIADIDDAA------------GIALADSLLSSSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la-~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~D~s~~~   77 (285)
                      ....+|++||||||+|||++++..|+ +.|+.++++++..+.            ...+.+.+.+.+.+...+.||+++.+
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            34678999999999999999999999 789999998876543            23445566667889999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCC---------CCCC---------------------CCCCCHHHHH---HHH
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQS---------KHKS---------------------ITDFDANEFD---NII  124 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~---------~~~~---------------------~~~~~~~~~~---~~~  124 (285)
                      +++++++++.+++|+||+||||++......         ..+|                     +...+.++++   +.|
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            999999999999999999999999753210         0011                     1223445544   455


Q ss_pred             HhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC--ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCcc
Q 040531          125 RINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP--HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVA  202 (285)
Q Consensus       125 ~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~--~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~  202 (285)
                      ....++.+...+...+.|  ..+++++.+|+.++....|.+  ..++++|++|+..++.|+.|+++  +++|++.||.+.
T Consensus       206 g~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~v  281 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLV  281 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCC
T ss_pred             hhhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccc
Confidence            566667777777777777  456999999999887665544  47899999999999999999985  899999999999


Q ss_pred             chhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC-Ccccccc
Q 040531          203 TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG-GFTTSKN  281 (285)
Q Consensus       203 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg-G~~~~~~  281 (285)
                      |.....+..              .+-.+..+++-    +++.++.|.+.+.+..|..+. -|-++....+|+ |+..-..
T Consensus       282 T~AssaIP~--------------~ply~~~l~kv----mk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r~d~  342 (401)
T 4ggo_A          282 TRASAVIPV--------------IPLYLASLFKV----MKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIRIDD  342 (401)
T ss_dssp             CTTGGGSSS--------------HHHHHHHHHHH----HHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEESCT
T ss_pred             cchhhcCCC--------------chHHHHHHHHH----HHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCccCch
Confidence            988765421              11111222211    122346788889998888653 233333455676 5544443


Q ss_pred             c
Q 040531          282 C  282 (285)
Q Consensus       282 ~  282 (285)
                      |
T Consensus       343 ~  343 (401)
T 4ggo_A          343 W  343 (401)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=4.4e-26  Score=191.76  Aligned_cols=200  Identities=13%  Similarity=0.062  Sum_probs=150.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|++|++|||||+|+||++++++|+++|+  +|++++|+.+......      ..++.++.+|++|.+++.++++     
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc-----
Confidence            46899999999999999999999999999  9999999876543211      1257889999999888776654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                        ++|+||||||...           ..+.+++.+++|+.++..+++++.+    .+.++||++||..+..  ++...|+
T Consensus        84 --~~d~vi~~ag~~~-----------~~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~--~~~~~Y~  144 (242)
T 2bka_A           84 --GHDVGFCCLGTTR-----------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK--SSNFLYL  144 (242)
T ss_dssp             --SCSEEEECCCCCH-----------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHH
T ss_pred             --CCCEEEECCCccc-----------ccCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC--CCcchHH
Confidence              7999999999642           1245678899999999998887644    4567999999987654  3456899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCc-EEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh--cccCCCCC
Q 040531          170 VSKHAIVGLTKNTACELGKYGI-RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA--NLKGVTLK  246 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  246 (285)
                      ++|++++.+++.+       ++ ++++|+||.+.|+.......               ............  ...++.+.
T Consensus       145 ~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~  202 (242)
T 2bka_A          145 QVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG---------------EWLVRKFFGSLPDSWASGHSVP  202 (242)
T ss_dssp             HHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH---------------HHHHHHHHCSCCTTGGGGTEEE
T ss_pred             HHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH---------------HHHHHHhhcccCccccCCcccC
Confidence            9999999998764       45 89999999999986432110               011111111111  01345789


Q ss_pred             HHHHHHHHHHHhcCCCC
Q 040531          247 ARDIAEAALYLASDESK  263 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~  263 (285)
                      ++|+|+++++++++...
T Consensus       203 ~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          203 VVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHhCccc
Confidence            99999999999987654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=1.3e-24  Score=192.54  Aligned_cols=220  Identities=15%  Similarity=0.088  Sum_probs=169.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC-CC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKH-GA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|++|||||+|+||++++++|+++ |+ +|++++|++.......+.+.  ..++.++.+|++|.+++.++++      
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~------   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE------   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT------
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh------
Confidence            68999999999999999999999999 97 99999999887766665553  3578999999999998887754      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                       .+|+|||+||....     +   ....+..+.+++|+.++..+++++.+.    +.+++|++||..+..+   ...|++
T Consensus        91 -~~D~Vih~Aa~~~~-----~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~  154 (344)
T 2gn4_A           91 -GVDICIHAAALKHV-----P---IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLYGA  154 (344)
T ss_dssp             -TCSEEEECCCCCCH-----H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHH
T ss_pred             -cCCEEEECCCCCCC-----C---chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHH
Confidence             69999999997421     1   122335678999999999999999774    4578999999766543   478999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh---hc----ccCC
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL---AN----LKGV  243 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~  243 (285)
                      +|++++.+++.++.++++.|+++++++||.|.++...- .+                ........+.   ..    ....
T Consensus       155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~-i~----------------~~~~~~~~g~~~~~i~~~~~~r~  217 (344)
T 2gn4_A          155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV-VP----------------FFKKLVQNKASEIPITDIRMTRF  217 (344)
T ss_dssp             HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH-HH----------------HHHHHHHHTCCCEEESCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH-HH----------------HHHHHHHcCCCceEEeCCCeEEe
Confidence            99999999999999888889999999999999865211 00                0111111110   00    0112


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ++.++|+|+++++++...   ..|+.+.++++.
T Consensus       218 ~i~v~D~a~~v~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          218 WITLDEGVSFVLKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             EECHHHHHHHHHHHHHHC---CSSCEEEECCCE
T ss_pred             eEEHHHHHHHHHHHHhhc---cCCCEEecCCCc
Confidence            578999999999998654   368888887764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=9e-25  Score=192.37  Aligned_cols=225  Identities=15%  Similarity=0.057  Sum_probs=164.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCch--hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDA--AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+. ...++.++.+|++|.+++.+++      
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~------   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV------   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH------
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh------
Confidence            45679999999999999999999997  89999998642  11111 1111 1457889999999999988876      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---------  160 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---------  160 (285)
                       +.+|+|||+||....        +.+.+++++.+++|+.++..+++++.+.   +..++||++||...+.         
T Consensus        74 -~~~d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E  141 (336)
T 2hun_A           74 -RKVDGVVHLAAESHV--------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTE  141 (336)
T ss_dssp             -HTCSEEEECCCCCCH--------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCT
T ss_pred             -hCCCEEEECCCCcCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCC
Confidence             279999999996421        1234567789999999999999999886   2247999999975432         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          161 --GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       161 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                        +.++...|+.+|++.+.+++.++.++   ++++++++||.+.++.....              ......+.....+..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~--------------~~~~~~~~~~~~~~~  204 (336)
T 2hun_A          142 NDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPE--------------KLIPKTIIRASLGLK  204 (336)
T ss_dssp             TBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTT--------------SHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcC--------------chHHHHHHHHHcCCC
Confidence              23345789999999999999999874   79999999999999864210              001111222222111


Q ss_pred             c-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 N-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .       ....++.++|+|+++++++++.   .+|+.+++++|...
T Consensus       205 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          205 IPIYGTGKNVRDWLYVEDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             EEEETC---CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             ceEeCCCCceeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            1       1123578999999999998653   37999999998754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=2.3e-25  Score=196.12  Aligned_cols=223  Identities=16%  Similarity=0.113  Sum_probs=158.3

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +.+...+++++++|||||+|+||++++++|+++|++|++++|+.....+..+    .-.++.++.+|++|.+++.+++++
T Consensus        11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~l~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----PVAGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC----SCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh----ccCCceEEEeeCCCHHHHHHHHhh
Confidence            3445567899999999999999999999999999999999997654321111    114688999999999999988775


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC---
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG---  162 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~---  162 (285)
                      +     ++|+||||||....    .     +.++++  +++|+.++..+++++..    .+.++||++||.......   
T Consensus        87 ~-----~~D~vih~A~~~~~----~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~  146 (330)
T 2pzm_A           87 F-----KPTHVVHSAAAYKD----P-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATV  146 (330)
T ss_dssp             H-----CCSEEEECCCCCSC----T-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSS
T ss_pred             c-----CCCEEEECCccCCC----c-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccC
Confidence            4     79999999997532    1     345555  99999999999999874    245799999998765433   


Q ss_pred             --C------CCccchhhHHHHHHHHHHHHHHhCCCCcE-EEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          163 --L------GPHAYTVSKHAIVGLTKNTACELGKYGIR-VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       163 --~------~~~~Y~asKaa~~~l~~~la~e~~~~~i~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                        +      +...|+.+|++++.+++.+  ++....|| ++.+.||. .+++....                    +...
T Consensus       147 ~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~--------------------~~~~  203 (330)
T 2pzm_A          147 PIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTF--------------------YKRL  203 (330)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHH--------------------HHHH
T ss_pred             CCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHH--------------------HHHH
Confidence              2      5678999999999999886  33333344 44555553 23322111                    1111


Q ss_pred             Hhhh---hcc-cCCCCCHHHHHH-HHHHHhcCCCCcccccEEEecCCcccc
Q 040531          234 VRGL---ANL-KGVTLKARDIAE-AALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       234 ~~~~---~~~-~~~~~~~eeva~-~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ..+.   ... ...++.++|+|+ ++++++++..    |+.+++++|...+
T Consensus       204 ~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s  250 (330)
T 2pzm_A          204 KAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP----TGVFNVSTGEGHS  250 (330)
T ss_dssp             HTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC----CEEEEESCSCCEE
T ss_pred             HcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCCC
Confidence            1110   000 234679999999 9999997642    8999999987543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=6.3e-25  Score=184.37  Aligned_cols=203  Identities=13%  Similarity=0.085  Sum_probs=142.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +..|++|||||+|+||++++++|+++| ++|++++|+.+.+.+.      ...++.++++|++|.++++++++       
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ-------   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------
Confidence            445899999999999999999999999 8999999988764321      13468999999999999888765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCc-----
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-----  166 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~-----  166 (285)
                      .+|+||||+|..            +.              ....+.+++.+++.+.++||++||.....+.+...     
T Consensus        88 ~~D~vv~~a~~~------------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~  141 (236)
T 3qvo_A           88 GQDIVYANLTGE------------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNN  141 (236)
T ss_dssp             TCSEEEEECCST------------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC-------------
T ss_pred             CCCEEEEcCCCC------------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchh
Confidence            689999999842            10              12355777777777788999999987765444321     


Q ss_pred             ----cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          167 ----AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       167 ----~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                          .+...+.+.       ..++.+.||++++|+||++.++........     .                 ......+
T Consensus       142 ~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~-----~-----------------~~~~~~~  192 (236)
T 3qvo_A          142 AVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT-----S-----------------RNEPFKG  192 (236)
T ss_dssp             ---CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE-----C-----------------TTSCCSC
T ss_pred             hcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe-----c-----------------cCCCCCC
Confidence                111222222       122346799999999999988754321100     0                 0011235


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc--cccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK--NCVG  284 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~--~~~~  284 (285)
                      +.++++|+|+++++++++++.++ |+.+.++++.+...  .|+|
T Consensus       193 ~~i~~~DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~~~~~~~~  235 (236)
T 3qvo_A          193 TIVSRKSVAALITDIIDKPEKHI-GENIGINQPGTDGDKPFFMG  235 (236)
T ss_dssp             SEEEHHHHHHHHHHHHHSTTTTT-TEEEEEECSSCCCCSSCCC-
T ss_pred             cEECHHHHHHHHHHHHcCccccc-CeeEEecCCCCCCCCCCccC
Confidence            66899999999999999887665 89999999887763  5765

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=1.6e-24  Score=192.55  Aligned_cols=227  Identities=17%  Similarity=0.080  Sum_probs=166.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEEEecCch--hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           17 IAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDA--AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++|||||+|+||++++++|++. |++|++++|+..  ..+.+ +.+. ...++.++.+|++|.+++.+++++     +++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ-----YQP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh-----cCC
Confidence            5999999999999999999998 799999998652  22111 1221 145789999999999999888764     279


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-----CceEEEEccccccc--------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-----SGCIISTASVASLM--------  160 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~ii~vss~~~~~--------  160 (285)
                      |+|||+||....        +.+.+++++.+++|+.++..+++++.+.|..-+     .++||++||.....        
T Consensus        75 d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~  146 (361)
T 1kew_A           75 DAVMHLAAESHV--------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             SEEEECCSCCCH--------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             CEEEECCCCcCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccc
Confidence            999999997421        123456788999999999999999999864321     35999999965331        


Q ss_pred             -------------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          161 -------------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       161 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                   +.++...|+.+|++++.+++.++.++   ++++++++||.|.++.....              ....
T Consensus       147 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~--------------~~~~  209 (361)
T 1kew_A          147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--------------KLIP  209 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--------------SHHH
T ss_pred             cccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcc--------------cHHH
Confidence                         12345789999999999999999886   69999999999999874210              0111


Q ss_pred             HHHHHHHhhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          228 EKMEELVRGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       228 ~~~~~~~~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..+.....+...       ....++.++|+|+++++++++.   .+|+.+++++|...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             HHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             HHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence            122222221111       1123578999999999999654   48999999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=4.5e-24  Score=188.25  Aligned_cols=227  Identities=18%  Similarity=0.087  Sum_probs=162.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHH-HHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA-LADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+.... ..+.+. ...++.++.+|++|.+++.++++.+     
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            468999999999999999999999999999999998765421 222221 1346889999999999999888765     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-----------c
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-----------M  160 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-----------~  160 (285)
                      ++|+||||||....        +.+.++++..+++|+.++..+++++.+ +  ...++||++||...+           .
T Consensus        75 ~~d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~  143 (345)
T 2z1m_A           75 QPDEVYNLAAQSFV--------GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKT  143 (345)
T ss_dssp             CCSEEEECCCCCCH--------HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             CCCEEEECCCCcch--------hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccC
Confidence            69999999996421        123456788999999999999999885 3  114799999997543           2


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhC---CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELG---KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      +.++...|+.+|++.+.+++.++.+++   ...+.++.+.||.+.|.+.....                 ..+.....+.
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~-----------------~~~~~~~~~~  206 (345)
T 2z1m_A          144 PFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT-----------------YSLARIKYGL  206 (345)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH-----------------HHHHHHHTTS
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH-----------------HHHHHHHcCC
Confidence            234567899999999999999999876   33456777888888776533210                 0111111110


Q ss_pred             h--------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          238 A--------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       238 ~--------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .        .....++.++|+|+++++++++..    ++.+++.+|..
T Consensus       207 ~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          207 QDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             CSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             CCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCC
Confidence            0        011236789999999999997653    35677766654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=4.3e-24  Score=189.43  Aligned_cols=236  Identities=14%  Similarity=0.012  Sum_probs=170.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch----hhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA----AGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~----~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      .++++++++|||||+|+||++++++|+++|++|++++|+..    .+..+.+.+.. ...++.++.+|++|.+++.++++
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           22 ELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             hcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            34578899999999999999999999999999999999764    23333222211 02568899999999998887765


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-  163 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-  163 (285)
                             .+|+|||+||....        ..+.++++..+++|+.++..+++++.+    .+.++||++||.....+.+ 
T Consensus       102 -------~~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~  162 (352)
T 1sb8_A          102 -------GVDYVLHQAALGSV--------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPG  162 (352)
T ss_dssp             -------TCSEEEECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCC
T ss_pred             -------CCCEEEECCcccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCC
Confidence                   69999999996421        013456788999999999999999866    3457899999987654332 


Q ss_pred             ----------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          164 ----------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       164 ----------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                                +...|+.+|++.+.+++.++.++   ++++++++||.+.++.......          ........+...
T Consensus       163 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~----------~~~~~~~~~~~~  229 (352)
T 1sb8_A          163 LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGA----------YAAVIPKWTSSM  229 (352)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCST----------TCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcc----------hhhHHHHHHHHH
Confidence                      35689999999999999999885   6999999999999876431100          000111122222


Q ss_pred             Hhhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          234 VRGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       234 ~~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..+...       ....++.++|+|+++++++... ....|+.+++.+|...
T Consensus       230 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          230 IQGDDVYINGDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             HCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence            222110       1124678999999999988652 2457899999988654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=6.8e-24  Score=188.44  Aligned_cols=234  Identities=14%  Similarity=-0.002  Sum_probs=170.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+++++|||||+|+||++++++|+++|++|++++|+.+......+.+. ...++.++++|++|.+++.++++..     
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            3678999999999999999999999999999999998766544444332 2457889999999999998887754     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-----------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-----------  160 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-----------  160 (285)
                      ++|+|||+||...        .+.+.+++.+.+++|+.++..+++++.+.   ...++||++||...+.           
T Consensus        80 ~~d~vih~A~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~  148 (357)
T 1rkx_A           80 QPEIVFHMAAQPL--------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYREN  148 (357)
T ss_dssp             CCSEEEECCSCCC--------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTT
T ss_pred             CCCEEEECCCCcc--------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCC
Confidence            6999999999531        12245667889999999999999998763   2357999999976431           


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHhC------CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          161 -GGLGPHAYTVSKHAIVGLTKNTACELG------KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       161 -~~~~~~~Y~asKaa~~~l~~~la~e~~------~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                       +..+...|+.+|++.+.+++.++.++.      +.++++++++||.+.+|.....             .......+...
T Consensus       149 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-------------~~~~~~~~~~~  215 (357)
T 1rkx_A          149 EAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-------------DRIVPDILRAF  215 (357)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-------------SCHHHHHHHHH
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-------------ccHHHHHHHHH
Confidence             223456899999999999999999885      3489999999999998753110             00111122222


Q ss_pred             Hhhhhc------ccCCCCCHHHHHHHHHHHhcCC--CCcccccEEEecCC
Q 040531          234 VRGLAN------LKGVTLKARDIAEAALYLASDE--SKYISGHNLVVDGG  275 (285)
Q Consensus       234 ~~~~~~------~~~~~~~~eeva~~~~~l~s~~--~~~~~G~~i~vdgG  275 (285)
                      ..+...      ....++.++|+|++++.++...  .....|+.+++.+|
T Consensus       216 ~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          216 EQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             HTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             hcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            221111      1123578899999999888531  11235788888764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=7.5e-25  Score=181.69  Aligned_cols=192  Identities=15%  Similarity=0.177  Sum_probs=154.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++||||+|+||++++++|+++|++|++++|+.+.....        .++.++++|++| .+++.++++       .+|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            699999999999999999999999999999998754321        568999999999 888877654       6999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC-------Cccc
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG-------PHAY  168 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~-------~~~Y  168 (285)
                      ||||||....                +.+++|+.++..+++++..    .+.++||++||..+..+.+.       ...|
T Consensus        67 vi~~ag~~~~----------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y  126 (219)
T 3dqp_A           67 IINVSGSGGK----------------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDY  126 (219)
T ss_dssp             EEECCCCTTS----------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHH
T ss_pred             EEECCcCCCC----------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHH
Confidence            9999997531                1578999999999888743    45579999999887765554       6789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +.+|++.+.+++      ...+++++.++||.+.++.....+..                         .......+.++
T Consensus       127 ~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-------------------------~~~~~~~i~~~  175 (219)
T 3dqp_A          127 YIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-------------------------NDEVSASNTIG  175 (219)
T ss_dssp             HHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-------------------------SSSCCCCEEHH
T ss_pred             HHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-------------------------CCCcCCcccHH
Confidence            999999999987      25689999999999998754322211                         12345578999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      |+|+++++++.+..  ..|+.+++++|.
T Consensus       176 Dva~~i~~~l~~~~--~~g~~~~i~~g~  201 (219)
T 3dqp_A          176 DVADTIKELVMTDH--SIGKVISMHNGK  201 (219)
T ss_dssp             HHHHHHHHHHTCGG--GTTEEEEEEECS
T ss_pred             HHHHHHHHHHhCcc--ccCcEEEeCCCC
Confidence            99999999997753  469999998775

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=3.3e-24  Score=180.91  Aligned_cols=219  Identities=11%  Similarity=0.014  Sum_probs=157.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|+++||||+|+||++++++|+++  |++|++++|+.+....+       ..++.++.+|++|.+++.++++      
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence            45789999999999999999999999  89999999987654332       3467889999999999888765      


Q ss_pred             CCccEEEECCCCCCCCCC-----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           91 GRLDILFNNAGVLGNQSK-----HKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                       .+|+||||||.......     .....+...+.+.+.+++|+.++..+++++.+.    +.++||++||..+..+.++.
T Consensus        69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~  143 (253)
T 1xq6_A           69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPL  143 (253)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGG
T ss_pred             -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCcc
Confidence             59999999997532100     000111223445567899999999999887653    35789999998775544433


Q ss_pred             cc-----chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          166 HA-----YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       166 ~~-----Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      ..     |+.+|++++.+++.       .++++++++||.+.++..... ..    ... ..     .       .....
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~-~~----~~~-~~-----~-------~~~~~  198 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVR-EL----LVG-KD-----D-------ELLQT  198 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSS-CE----EEE-ST-----T-------GGGGS
T ss_pred             ccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchh-hh----hcc-CC-----c-------CCcCC
Confidence            33     55699999988753       689999999999998763211 00    000 00     0       00011


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ..+.+.++|+|+++++++++..  ..|+.+++++|-
T Consensus       199 ~~~~~~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          199 DTKTVPRADVAEVCIQALLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             SCCEEEHHHHHHHHHHHTTCGG--GTTEEEEEEECC
T ss_pred             CCcEEcHHHHHHHHHHHHcCcc--ccCCEEEecCCC
Confidence            2346789999999999997643  479999999863

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=5.4e-23  Score=168.25  Aligned_cols=199  Identities=13%  Similarity=0.081  Sum_probs=149.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++++++||||+|+||++++++|+++|++|++++|+.+.....      ...++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~   68 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CC
Confidence            347999999999999999999999999999999987654211      14568899999999998887764       58


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC----CCccch
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL----GPHAYT  169 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~----~~~~Y~  169 (285)
                      |+|||+||....       .+  +      .++|+.++..+++++.+.    +.+++|++||.......+    +...|+
T Consensus        69 d~vi~~a~~~~~-------~~--~------~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~y~  129 (206)
T 1hdo_A           69 DAVIVLLGTRND-------LS--P------TTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPTKVPPRLQAVT  129 (206)
T ss_dssp             SEEEECCCCTTC-------CS--C------CCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTTCSCGGGHHHH
T ss_pred             CEEEECccCCCC-------CC--c------cchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcccccccchhHH
Confidence            999999987532       01  0      137888888888877553    457899999987654433    457899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCc-cchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGV-ATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      .+|++++.+++.       .+++++.++||.+ .++........        .             .  ..+.+..++++
T Consensus       130 ~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~--------~-------------~--~~~~~~~i~~~  179 (206)
T 1hdo_A          130 DDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVT--------L-------------D--GRGPSRVISKH  179 (206)
T ss_dssp             HHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEE--------S-------------S--SCSSCSEEEHH
T ss_pred             HHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEec--------c-------------c--CCCCCCccCHH
Confidence            999999998853       5799999999998 33322111000        0             0  01114567999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      |+|+++++++.+..  .+|+.++++||+
T Consensus       180 Dva~~~~~~~~~~~--~~g~~~~i~~g~  205 (206)
T 1hdo_A          180 DLGHFMLRCLTTDE--YDGHSTYPSHQY  205 (206)
T ss_dssp             HHHHHHHHTTSCST--TTTCEEEEECCC
T ss_pred             HHHHHHHHHhcCcc--ccccceeeeccc
Confidence            99999999997753  689999999996

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=5.9e-23  Score=181.52  Aligned_cols=234  Identities=14%  Similarity=0.050  Sum_probs=160.2

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~   81 (285)
                      .+++++.++++++|||||+|+||++++++|+++|  +.|+..+|......  .+.+..  ...++.++.+|++|.+++.+
T Consensus        15 ~~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~   92 (346)
T 4egb_A           15 TENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEH   92 (346)
T ss_dssp             ---------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHH
T ss_pred             ccccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHH
Confidence            4556777899999999999999999999999999  67777777642211  111211  23579999999999999998


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC
Q 040531           82 LINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG  161 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~  161 (285)
                      +++..     ++|+|||+||....        ....+++...+++|+.++..+++++.+.    +..++|++||...+..
T Consensus        93 ~~~~~-----~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~  155 (346)
T 4egb_A           93 VIKER-----DVQVIVNFAAESHV--------DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGS  155 (346)
T ss_dssp             HHHHH-----TCCEEEECCCCC-----------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCC
T ss_pred             HHhhc-----CCCEEEECCcccch--------hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCC
Confidence            88753     69999999997532        1244567788999999999999988653    4578999999765433


Q ss_pred             CC------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          162 GL------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       162 ~~------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .+            +...|+.+|.+.+.+++.++.+.   ++++..++|+.+.+|.....              ......
T Consensus       156 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~--------------~~~~~~  218 (346)
T 4egb_A          156 LGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPE--------------KLIPLM  218 (346)
T ss_dssp             CCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--------------SHHHHH
T ss_pred             CCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCcc--------------chHHHH
Confidence            21            24689999999999999999874   79999999999988753210              011112


Q ss_pred             HHHHHhhhhcc-------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          230 MEELVRGLANL-------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       230 ~~~~~~~~~~~-------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.....+...+       ...++.++|+|+++++++....   .|+.+++.+|...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          219 VTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             HHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             HHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence            22222221111       1123568999999999997654   8999999998754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.91  E-value=1.9e-23  Score=186.03  Aligned_cols=230  Identities=16%  Similarity=0.072  Sum_probs=159.9

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHH--CCCeEEEEecCchhhHHHH-------HHhhcCCCceEEEeccCCCHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVK--HGAKVVIADIDDAAGIALA-------DSLLSSSPLVTYLHCDVSLEQDI   79 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~--~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~v~~~~~D~s~~~~i   79 (285)
                      +++++++|++|||||+|+||++++++|++  .|++|++++|+........       ........++.++.+|++|.+++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            45688999999999999999999999999  9999999999765211100       00111234678999999999988


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc
Q 040531           80 QNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL  159 (285)
Q Consensus        80 ~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~  159 (285)
                      +++      ...++|+|||+||....          +.++++..+++|+.++..+++++..    . +++||++||...+
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~----------~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vy  142 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT----------TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVY  142 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG----------GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGG
T ss_pred             HHh------hccCCCEEEECCccCCc----------cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHh
Confidence            876      23579999999996421          3355788999999999999999844    2 3459999996543


Q ss_pred             cCCC----------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          160 MGGL----------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       160 ~~~~----------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      ...+          +...|+.+|++.+.+++.++.+     +.+..++|+.+..|........          .......
T Consensus       143 g~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~----------~~~~~~~  207 (362)
T 3sxp_A          143 GNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKT----------ASMVLQL  207 (362)
T ss_dssp             CSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGG----------SCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcc----------hhHHHHH
Confidence            2211          2346999999999999988765     6778888888877654321000          0011122


Q ss_pred             HHHHHhhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          230 MEELVRGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       230 ~~~~~~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.....+...       ....++.++|+|+++++++++..   +| .+++.+|...
T Consensus       208 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          208 ALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             HHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             HHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence            2222221111       11235679999999999997653   68 9999888654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.90  E-value=3.1e-23  Score=182.84  Aligned_cols=211  Identities=13%  Similarity=0.065  Sum_probs=153.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|+||++++++|+++|++|++++|+....+.    +.  ..++.++.+|++|.+++.++++       .+|+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~--~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA--YLEPECRVAEMLDHAGLERALR-------GLDG   80 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG--GGCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc--cCCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence            489999999999999999999999999999998765432    11  1257889999999998877764       6999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC-----------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG-----------  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~-----------  164 (285)
                      |||+||...          ...+++.+.+++|+.++..+++++.+.    +.+++|++||.....+.+.           
T Consensus        81 vih~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~  146 (342)
T 2x4g_A           81 VIFSAGYYP----------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYD  146 (342)
T ss_dssp             EEEC----------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCS
T ss_pred             EEECCccCc----------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCC
Confidence            999999642          134567788999999999999998774    3578999999877544333           


Q ss_pred             -----CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh-hhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          165 -----PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML-VNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       165 -----~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                           ...|+.+|++.+.+++.++.   + |+++++++||.+.++.. .....                ..+.....+..
T Consensus       147 p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~----------------~~~~~~~~~~~  206 (342)
T 2x4g_A          147 SLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTG----------------RVITAIGNGEM  206 (342)
T ss_dssp             SCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTT----------------HHHHHHHTTCC
T ss_pred             ccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHH----------------HHHHHHHcCCC
Confidence                 67899999999999999886   3 79999999999998764 10000                11112222111


Q ss_pred             c----ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          239 N----LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       239 ~----~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      .    ....++.++|+|+++++++.+..   .|+.+++.+|.
T Consensus       207 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          207 THYVAGQRNVIDAAEAGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             CEEECCEEEEEEHHHHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             ccccCCCcceeeHHHHHHHHHHHHhCCC---CCceEEEcCCc
Confidence            1    11125689999999999997654   28999999986

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=4.1e-23  Score=181.89  Aligned_cols=220  Identities=17%  Similarity=0.113  Sum_probs=154.1

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .....++++++|||||+|+||++++++|+++|++|++++|+.....+   .+.+ ..++.++.+|++|.+++.++++.  
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~-~~~~~~~~~Dl~d~~~~~~~~~~--   87 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD-HPNLTFVEGSIADHALVNQLIGD--   87 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC-CTTEEEEECCTTCHHHHHHHHHH--
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh-cCCceEEEEeCCCHHHHHHHHhc--
Confidence            34456789999999999999999999999999999999997543211   1111 14688999999999999888764  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc----CC-
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM----GG-  162 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~----~~-  162 (285)
                         +++|+|||+||....    .     +.++++  +++|+.++..+++++.+    .+.++||++||.....    .. 
T Consensus        88 ---~~~D~vih~A~~~~~----~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~  149 (333)
T 2q1w_A           88 ---LQPDAVVHTAASYKD----P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQP  149 (333)
T ss_dssp             ---HCCSEEEECCCCCSC----T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSS
T ss_pred             ---cCCcEEEECceecCC----C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCC
Confidence               269999999997532    1     334444  99999999999999876    3457999999976543    21 


Q ss_pred             -------CCC-ccchhhHHHHHHHHHH-HHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          163 -------LGP-HAYTVSKHAIVGLTKN-TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       163 -------~~~-~~Y~asKaa~~~l~~~-la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                             .+. ..|+.+|++++.+++. ++        .+..+.|+.+..|.....               .....+...
T Consensus       150 ~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~---------------~~~~~~~~~  206 (333)
T 2q1w_A          150 VRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSG---------------PLPIFFQRL  206 (333)
T ss_dssp             BCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSS---------------HHHHHHHHH
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCc---------------HHHHHHHHH
Confidence                   223 7899999999999987 64        556788887766541100               000111111


Q ss_pred             Hhhh----hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          234 VRGL----ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       234 ~~~~----~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ....    ......++.++|+|++++++++...    |+.+++++|...
T Consensus       207 ~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          207 SEGKKCFVTKARRDFVFVKDLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             HcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            1110    1223456789999999999997654    899999998754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=2.6e-23  Score=181.29  Aligned_cols=221  Identities=15%  Similarity=0.088  Sum_probs=159.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|+||++++++|+++|++|++++|......   +.+   ..++.++.+|++|.+++.++++.     ..+|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~---~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENV---PKGVPFFRVDLRDKEGVERAFRE-----FRPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGS---CTTCCEECCCTTCHHHHHHHHHH-----HCCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhc---ccCeEEEECCCCCHHHHHHHHHh-----cCCCEE
Confidence            6999999999999999999999999999998543211   111   23577889999999999888764     269999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-------------C
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-------------L  163 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-------------~  163 (285)
                      ||+|+....        ..+.+++...+++|+.+++.+++++.+    .+.++||++||.++..+.             .
T Consensus        71 i~~a~~~~~--------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~  138 (311)
T 2p5y_A           71 SHQAAQASV--------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPR  138 (311)
T ss_dssp             EECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCC
T ss_pred             EECccccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCC
Confidence            999986421        124456788999999999999998864    345789999997332221             2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh-----
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA-----  238 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  238 (285)
                      +...|+.+|++++.+++.++.++   ++++++++|+.+.+|.......           .......+.....+..     
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  204 (311)
T 2p5y_A          139 PKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGE-----------AGVVAIFAERVLKGLPVTLYA  204 (311)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSST-----------THHHHHHHHHHHHTCCEEEEC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCc-----------CcHHHHHHHHHHcCCCcEEEe
Confidence            35689999999999999999875   6999999999999986421100           0011111222222110     


Q ss_pred             -------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          239 -------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       239 -------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                             .....++.++|+|+++++++...     |+.+++.+|...+
T Consensus       205 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s  247 (311)
T 2p5y_A          205 RKTPGDEGCVRDYVYVGDVAEAHALALFSL-----EGIYNVGTGEGHT  247 (311)
T ss_dssp             SSSTTSCCCEECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred             cccCCCCCeEEeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence                   01123467999999999998653     8899999887543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=5.4e-23  Score=181.83  Aligned_cols=221  Identities=16%  Similarity=0.110  Sum_probs=161.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhh-HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAG-IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++|||||+|+||++++++|+++  |++|++++|+.... ....+.+  ...++.++.+|++|.+++.++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            68999999999999999999999  89999999865321 1111122  13578899999999998887765       4


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc------------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM------------  160 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~------------  160 (285)
                      +|+|||+||....        +.+.+++++.+++|+.++..+++++.+.    + ++||++||...+.            
T Consensus        76 ~d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~  142 (348)
T 1oc2_A           76 ADAIVHYAAESHN--------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHG  142 (348)
T ss_dssp             CSEEEECCSCCCH--------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             CCEEEECCcccCc--------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccc
Confidence            6999999996421        1234556789999999999999999875    2 3999999975431            


Q ss_pred             -----------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          161 -----------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       161 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                 +.++...|+.+|++.+.+++.++.++   ++++++++||.+.++.....              ......
T Consensus       143 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~--------------~~~~~~  205 (348)
T 1oc2_A          143 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE--------------KFIPRQ  205 (348)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT--------------SHHHHH
T ss_pred             cccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCcc--------------chHHHH
Confidence                       12345689999999999999999886   69999999999998764210              011111


Q ss_pred             HHHHHhhhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          230 MEELVRGLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       230 ~~~~~~~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.....+..       .....++.++|+|+++++++++.   .+|+.+++++|...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          206 ITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             HHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence            222222111       11224678999999999999654   37999999998654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=2.6e-22  Score=177.49  Aligned_cols=228  Identities=12%  Similarity=0.062  Sum_probs=157.5

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +...+.+.++|++|||||+|+||++++++|+++|++|++++|+.+.            .++.++.+|++|.+++.++++ 
T Consensus        10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~-   76 (347)
T 4id9_A           10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM-   76 (347)
T ss_dssp             -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred             CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh-
Confidence            3455667899999999999999999999999999999999998754            457889999999999887765 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC----
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG----  161 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~----  161 (285)
                            .+|+|||+|+....          +...++..+++|+.++..+++++.+    .+.++||++||...+..    
T Consensus        77 ------~~d~vih~A~~~~~----------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~  136 (347)
T 4id9_A           77 ------GVSAVLHLGAFMSW----------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPE  136 (347)
T ss_dssp             ------TCSEEEECCCCCCS----------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCS
T ss_pred             ------CCCEEEECCcccCc----------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCC
Confidence                  79999999986522          3344588999999999999998855    34679999999654322    


Q ss_pred             ---------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCcc-------------chhhhhhhcccccccCC
Q 040531          162 ---------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVA-------------TSMLVNAWKSCEDCMDS  219 (285)
Q Consensus       162 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~-------------t~~~~~~~~~~~~~~~~  219 (285)
                               ..+...|+.+|.+.+.+++.++.+   .++++..++|+.+.             .|..........     
T Consensus       137 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~-----  208 (347)
T 4id9_A          137 FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQ-----  208 (347)
T ss_dssp             SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHH-----
T ss_pred             CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCccccccccc-----
Confidence                     234568999999999999999887   47999999999998             433111000000     


Q ss_pred             CCCchHHHHHHHHHHhhhhc-----------ccCCC----CCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          220 GKPCEEEEEKMEELVRGLAN-----------LKGVT----LKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~----~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        ........+..+......           ....+    +.++|+|++++.++....  ..|+.+++.+|...
T Consensus       209 --~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          209 --QQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             --HHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             --ccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence              000000111111111100           01123    678999999999997653  35899999888654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=2.2e-23  Score=221.48  Aligned_cols=177  Identities=16%  Similarity=0.178  Sum_probs=139.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhh---HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAG---IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~---~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+|++|||||++|||+++|++|+++|++ |++++|+....   .+..+++.+.+.++.++.||++|.++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            6899999999999999999999999997 88889886543   34445555557789999999999999999999987 4


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++||+||||||+...    .++.+++.++|++.+++|+.|++++.+.+.+.|.+  .++||++||..+..+.++...|+
T Consensus      1962 ~g~id~lVnnAgv~~~----~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~ 2035 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD----AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYG 2035 (2512)
T ss_dssp             HSCEEEEEECCCC--------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHH
T ss_pred             cCCCcEEEECCCcCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHH
Confidence            7999999999998643    67888999999999999999999999999998854  38999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCc
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGV  201 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v  201 (285)
                      ++|+++++|++.+..+    |+...++..|.+
T Consensus      2036 aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2036 FANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            9999999999977654    566666665544

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.90  E-value=6.4e-22  Score=178.37  Aligned_cols=246  Identities=12%  Similarity=-0.031  Sum_probs=162.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHH----------------HHHHh-hcCCCceEEEecc
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIA----------------LADSL-LSSSPLVTYLHCD   72 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~----------------~~~~~-~~~~~~v~~~~~D   72 (285)
                      ....+++++|||||+|.||++++++|+++|++|++++|+......                ....+ .....++.++.+|
T Consensus         6 ~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A            6 HHHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             ccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            446789999999999999999999999999999999986543211                11111 1124568899999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEE
Q 040531           73 VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIIS  152 (285)
Q Consensus        73 ~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~  152 (285)
                      ++|.+++.++++..     ++|+|||+||....     .....+++.+...+++|+.++..+++++.+.-   ...+||+
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~  152 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRSA-----PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVK  152 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEE
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCCc-----cchhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEE
Confidence            99999998887754     69999999997532     11122567778899999999999999987642   1248999


Q ss_pred             Eccccccc------------------------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhh
Q 040531          153 TASVASLM------------------------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVN  208 (285)
Q Consensus       153 vss~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~  208 (285)
                      +||.+...                        +..+...|+.+|++.+.+++.++.++   |+++++++||.|.+|....
T Consensus       153 ~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~  229 (404)
T 1i24_A          153 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDE  229 (404)
T ss_dssp             ECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTT
T ss_pred             eCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCc
Confidence            99975432                        22235679999999999999998876   7999999999999875421


Q ss_pred             hhcccccccCCCCC----chHHHHHHHHHHhhhhc-c------cCCCCCHHHHHHHHHHHhcCCCCcccc--cEEEecC
Q 040531          209 AWKSCEDCMDSGKP----CEEEEEKMEELVRGLAN-L------KGVTLKARDIAEAALYLASDESKYISG--HNLVVDG  274 (285)
Q Consensus       209 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~------~~~~~~~eeva~~~~~l~s~~~~~~~G--~~i~vdg  274 (285)
                      ..... .....+.+    .......+.....+... .      ...++.++|+|++++.++....  ..|  +.+++-+
T Consensus       230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          230 TEMHE-ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGGSG-GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccc-ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence            10000 00000000    01112222222222111 1      1124679999999999886532  246  6788754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.90  E-value=2.3e-22  Score=178.04  Aligned_cols=235  Identities=13%  Similarity=0.015  Sum_probs=171.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-----CceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-----PLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +.+++|++|||||+|+||++++++|+++|++|++++|+........+.+....     .++.++.+|++|.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            45688999999999999999999999999999999997665444444443221     578999999999998887765 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC--
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL--  163 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~--  163 (285)
                            .+|+|||+||....        ....+++...+++|+.++..+++++.+.    +..++|++||...+...+  
T Consensus       100 ------~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~  161 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSV--------PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPAL  161 (351)
T ss_dssp             ------TCSEEEECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCS
T ss_pred             ------CCCEEEECCccCCc--------chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCCC
Confidence                  69999999996421        1244567788999999999999988653    456899999986653322  


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHH
Q 040531          164 ---------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELV  234 (285)
Q Consensus       164 ---------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                               +...|+.+|.+.+.+++.++.+.   ++++..++|+.+.++.......          ........+....
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~----------~~~~~~~~~~~~~  228 (351)
T 3ruf_A          162 PKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGA----------YAAVIPKWTAAML  228 (351)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCST----------TCCHHHHHHHHHH
T ss_pred             CCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcc----------hhhHHHHHHHHHH
Confidence                     24689999999999999999875   6999999999998875321100          0001112222222


Q ss_pred             hhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          235 RGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       235 ~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+...       ....++.++|+|++++.++... ....|+.+++.+|...
T Consensus       229 ~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          229 KGDDVYINGDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             HTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             cCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            22111       1123567999999999988652 2457899999888654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=9.4e-23  Score=179.66  Aligned_cols=228  Identities=18%  Similarity=0.150  Sum_probs=154.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHH--hhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS--LLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+++|++|||||+|+||++++++|+++|++|+++.|+.+...+....  +.....++.++++|++|.+++.++++     
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            34789999999999999999999999999999999887643322211  11001257889999999988877764     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------  163 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------  163 (285)
                        .+|+|||+|+...       ..  ..+..++.+++|+.++..+++++.+..   ..++||++||..+..+.+      
T Consensus        77 --~~d~Vih~A~~~~-------~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~  142 (337)
T 2c29_D           77 --GCTGVFHVATPMD-------FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVY  142 (337)
T ss_dssp             --TCSEEEECCCCCC-------SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEE
T ss_pred             --CCCEEEEeccccC-------CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCccc
Confidence              5899999998531       11  112235689999999999999987753   247899999987543211      


Q ss_pred             ----------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          164 ----------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       164 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                      ....|+.||++.+.+++.++.+   +|+++++++|+.|.+|........            ...
T Consensus       143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~------------~~~  207 (337)
T 2c29_D          143 DESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPP------------SLI  207 (337)
T ss_dssp             CTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCH------------HHH
T ss_pred             CcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCc------------hHH
Confidence                            2236999999999999887765   479999999999999864321110            000


Q ss_pred             HHHHHHHhh----h-hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          228 EKMEELVRG----L-ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       228 ~~~~~~~~~----~-~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      .... ...+    + .....+++.++|+|+++++++...  ...|..+..+++.
T Consensus       208 ~~~~-~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~~  258 (337)
T 2c29_D          208 TALS-PITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP--KAEGRYICSSHDC  258 (337)
T ss_dssp             HHTH-HHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECCEEE
T ss_pred             HHHH-HHcCCCccccccCCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeCCCC
Confidence            0000 0000    0 011234789999999999998653  3456655444443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=4.1e-23  Score=187.93  Aligned_cols=231  Identities=13%  Similarity=0.034  Sum_probs=161.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch---hhHHHHHHhhc---------CCCceEEEeccCCCHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA---AGIALADSLLS---------SSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~---~~~~~~~~~~~---------~~~~v~~~~~D~s~~~   77 (285)
                      +....++++|||||+|+||++++++|++.|++|++++|+..   ....+.+.+.+         ...++.++.+|+++.+
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            34467889999999999999999999999999999999877   33333332211         1367999999999988


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ++.        ..+++|+||||||...           ..+++...+++|+.++..+++++.+     +..++|++||..
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~-----------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~  199 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTD-----------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTIS  199 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC------------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGG
T ss_pred             cCC--------CcCCCCEEEECCcccC-----------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchH
Confidence            776        4568999999999752           1245778899999999999999877     347899999977


Q ss_pred             c--c----------------cCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCC
Q 040531          158 S--L----------------MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDS  219 (285)
Q Consensus       158 ~--~----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~  219 (285)
                      .  .                .+......|+.+|++.+.+++.++.    .|+++++++||.|.++.....+...      
T Consensus       200 ~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~------  269 (427)
T 4f6c_A          200 VGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRN------  269 (427)
T ss_dssp             GGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTT------
T ss_pred             hCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccC------
Confidence            6  0                0122567899999999999998764    5899999999999887644321100      


Q ss_pred             CCCchHHHHHHHHHHhhhh------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          220 GKPCEEEEEKMEELVRGLA------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                       .........+........      .....++.++|+|+++++++....   .|+++++++|...
T Consensus       270 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          270 -IKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             -GGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             -cchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence             000011122222222111      112336788999999999997654   8999999998654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.89  E-value=3.1e-23  Score=180.64  Aligned_cols=218  Identities=20%  Similarity=0.095  Sum_probs=160.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.+......      ...+.++.+|++|.+ +.++++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhcC-------C-CE
Confidence            47999999999999999999999999999999766532211      456889999999977 554432       3 99


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~  164 (285)
                      |||+||...        ...+.+++...+++|+.++..+++++...    +.++||++||...+..           ..+
T Consensus        66 vih~A~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p  133 (312)
T 3ko8_A           66 VFHFAANPE--------VRLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKP  133 (312)
T ss_dssp             EEECCSSCS--------SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             EEECCCCCC--------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence            999999532        23355667889999999999999988543    4568999999765422           224


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh------
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA------  238 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  238 (285)
                      ...|+.+|++.+.+++.++.++   +++++.++||.+.+|......               ....+........      
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  195 (312)
T 3ko8_A          134 ISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV---------------IYDFIMKLRRNPNVLEVLG  195 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH---------------HHHHHHHHHHCTTEEEEC-
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh---------------HHHHHHHHHhCCCCeEEcC
Confidence            5789999999999999999986   799999999999998643211               1112222222100      


Q ss_pred             --cccCCCCCHHHHHHHHHHHhcC-CCCcccccEEEecCCccc
Q 040531          239 --NLKGVTLKARDIAEAALYLASD-ESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 --~~~~~~~~~eeva~~~~~l~s~-~~~~~~G~~i~vdgG~~~  278 (285)
                        .....++.++|+|+++++++.. ......|+.+++.+|...
T Consensus       196 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          196 DGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             ---CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCce
Confidence              0112346799999999999865 223457899999988654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=1.6e-22  Score=178.19  Aligned_cols=222  Identities=16%  Similarity=0.120  Sum_probs=160.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---C---CeEEEEecCchhh-HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKH---G---AKVVIADIDDAAG-IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~---g---~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++|||||+|+||++++++|+++   |   ++|++++|+.... .+..+.+. ...++.++.+|++|.+++.+++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh------
Confidence            6999999999999999999997   8   8999999864211 11111121 2357889999999998887765      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc---------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM---------  160 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~---------  160 (285)
                       ..+|+|||+||....        +.+.+++++.+++|+.++..+++++.+.    +.++||++||...+.         
T Consensus        75 -~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E  141 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV--------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTE  141 (337)
T ss_dssp             -TTCCEEEECCSCCCH--------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred             -cCCCEEEECCCccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCC
Confidence             479999999996421        1233456788999999999999998774    346899999975432         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          161 --GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       161 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                        +..+...|+.+|++.+.+++.++.++   +++++.++|+.+.++.....              ......+.....+..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~--------------~~~~~~~~~~~~~~~  204 (337)
T 1r6d_A          142 SSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--------------KLIPLFVTNLLDGGT  204 (337)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--------------SHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCC--------------ChHHHHHHHHhcCCC
Confidence              22345789999999999999999875   69999999999998764210              001111222222111


Q ss_pred             cc-------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 NL-------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ~~-------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+       ...++.++|+|+++++++.+.   .+|+.+++.+|...
T Consensus       205 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          205 LPLYGDGANVREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             cEEeCCCCeeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            11       123567899999999998654   37999999998654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.89  E-value=2e-22  Score=180.68  Aligned_cols=226  Identities=13%  Similarity=0.044  Sum_probs=162.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +.+.+++|||||+|+||++++++|+++|++|++++|+.......      ...++.++.+|++|.+++.++++       
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE-------   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------
Confidence            44678999999999999999999999999999999986543211      12467889999999998887764       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-----------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-----------  160 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-----------  160 (285)
                      .+|+|||+||....    .   ....+++.+.+++|+.++..+++++.+    .+.++||++||...+.           
T Consensus        93 ~~d~Vih~A~~~~~----~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~  161 (379)
T 2c5a_A           93 GVDHVFNLAADMGG----M---GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVS  161 (379)
T ss_dssp             TCSEEEECCCCCCC----H---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             CCCEEEECceecCc----c---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCC
Confidence            69999999997421    0   011345778899999999999999864    3456899999976432           


Q ss_pred             -------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHH
Q 040531          161 -------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEEL  233 (285)
Q Consensus       161 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                             +..+...|+.+|++.+.+++.++.++   ++++++++||.+.++.......          ........+...
T Consensus       162 ~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~----------~~~~~~~~~~~~  228 (379)
T 2c5a_A          162 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGG----------REKAPAAFCRKA  228 (379)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSS----------CCCHHHHHHHHH
T ss_pred             cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccc----------cccHHHHHHHHH
Confidence                   22345689999999999999998874   7999999999999875421100          000111122222


Q ss_pred             Hhhhh--c------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          234 VRGLA--N------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       234 ~~~~~--~------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .....  .      ....++.++|+|+++++++...    .|+.+++.+|...
T Consensus       229 ~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          229 QTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             HHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             HhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence            22110  0      1123577999999999999654    5778899887654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=1.2e-22  Score=177.18  Aligned_cols=215  Identities=16%  Similarity=0.119  Sum_probs=155.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||+|+||++++++|+++|..|++..++......       ....+.++.+|+++ +++.++++       .+|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            479999999999999999999999555544444332211       13568899999999 88777654       7999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-----------CCCC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-----------GGLG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-----------~~~~  164 (285)
                      |||+|+...        ...+.+++++.+++|+.++..+++++..    .+.+++|++||...+.           +..+
T Consensus        67 vih~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  134 (313)
T 3ehe_A           67 VWHIAANPD--------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHP  134 (313)
T ss_dssp             EEECCCCCC--------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred             EEECCCCCC--------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCC
Confidence            999998532        2345566888999999999999998654    3457999999976542           2334


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh------
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA------  238 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  238 (285)
                      ...|+.+|++.+.+++.++.++   +++++.++|+.+.+|.....               .....+........      
T Consensus       135 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~---------------~~~~~~~~~~~~~~~~~~~~  196 (313)
T 3ehe_A          135 ISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHG---------------VIYDFIMKLKRNPEELEILG  196 (313)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCS---------------HHHHHHHHHHHCTTEEEEST
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcC---------------hHHHHHHHHHcCCCceEEeC
Confidence            5789999999999999999884   79999999999988753211               11112222222100      


Q ss_pred             --cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 --NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 --~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        .....++.++|+|+++++++.+.   ..|+.+++.+|...
T Consensus       197 ~g~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          197 NGEQNKSYIYISDCVDAMLFGLRGD---ERVNIFNIGSEDQI  235 (313)
T ss_dssp             TSCCEECCEEHHHHHHHHHHHTTCC---SSEEEEECCCSCCE
T ss_pred             CCCeEEeEEEHHHHHHHHHHHhccC---CCCceEEECCCCCe
Confidence              01123678899999999999733   47899999988654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=1.5e-21  Score=174.05  Aligned_cols=231  Identities=12%  Similarity=0.100  Sum_probs=153.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH-HHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~-~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.+    ...++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999765421 11122211    1356889999999999999888754   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--------  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--------  161 (285)
                        ++|+||||||....        ..+.+++...+++|+.++..+++++.+...+ +.++||++||...+..        
T Consensus        78 --~~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E  146 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKE  146 (372)
T ss_dssp             --CCSEEEECCCCCTT--------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             --CCCEEEECCcccCc--------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCc
Confidence              69999999997532        1234557788999999999999999886543 3479999999765432        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          162 ---GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       162 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                         ..+...|+.+|++++.+++.++.++   ++.+..+.|..+..|.....+..           ......+.....+..
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~-----------~~~~~~~~~~~~g~~  212 (372)
T 1db3_A          147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVT-----------RKITRAIANIAQGLE  212 (372)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHH-----------HHHHHHHHHHHTTSC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchh-----------hHHHHHHHHHHcCCC
Confidence               1235689999999999999999885   46666666665554432110000           000111111111110


Q ss_pred             --------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          239 --------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       239 --------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                              .....++.++|+|++++.++....    ++.+++.+|..
T Consensus       213 ~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          213 SCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             CCEEESCTTCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             CceeecCCCceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence                    011235789999999999886542    46777766654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.88  E-value=3.3e-22  Score=179.02  Aligned_cols=233  Identities=15%  Similarity=0.086  Sum_probs=161.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.....+   .+. ...++.++.+|++|.+++.++++      
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~------   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD------   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS------
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh------
Confidence            5788999999999999999999999999 999999997654221   111 24568899999999988776654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEccccccc---------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLM---------  160 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~---------  160 (285)
                       .+|+|||+||....        ..+.+++.+.+++|+.++..+++++.    +. +.+++|++||...+.         
T Consensus        99 -~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~~~~  165 (377)
T 2q1s_A           99 -EYDYVFHLATYHGN--------QSSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDDAKA  165 (377)
T ss_dssp             -CCSEEEECCCCSCH--------HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC-------------
T ss_pred             -CCCEEEECCCccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCCcCc
Confidence             79999999996421        12345678899999999999998873    33 456899999975321         


Q ss_pred             -------CC-CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhh---hhcccccccCCCCCchHHHHH
Q 040531          161 -------GG-LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVN---AWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       161 -------~~-~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~  229 (285)
                             +. .+...|+.+|++.+.+++.++.++   ++++++++||.+.++....   .|.....  .  .........
T Consensus       166 ~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~--~--~~~~~~~~~  238 (377)
T 2q1s_A          166 TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPA--T--VWRNVTPTF  238 (377)
T ss_dssp             -CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGG--G--TSCSHHHHH
T ss_pred             ccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcc--c--ccccHHHHH
Confidence                   21 345689999999999999998875   7999999999999876410   0000000  0  000011112


Q ss_pred             HHHHHhhhhc-------ccCCCCCHHHHHHH-HHHHhcCCCCcccccEEEecCCccc
Q 040531          230 MEELVRGLAN-------LKGVTLKARDIAEA-ALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       230 ~~~~~~~~~~-------~~~~~~~~eeva~~-~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.....+...       ....++.++|+|++ +++++....   +| .+++.+|...
T Consensus       239 ~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          239 IYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             HHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             HHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence            2222221110       11235669999999 999987643   78 9999988543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.88  E-value=1.7e-22  Score=176.71  Aligned_cols=220  Identities=20%  Similarity=0.153  Sum_probs=146.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-Cchh---hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAA---GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~---~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+.   .... ..+.....++.++.+|++|.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 5432   1111 1111001257889999999998887765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHH-HHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC-----
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANE-FDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG-----  164 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~-----  164 (285)
                       .+|+|||+|+..          ....++ +++.+++|+.+++.+++++.+..   +.++||++||..+..+.+.     
T Consensus        74 -~~d~vih~A~~~----------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~  139 (322)
T 2p4h_X           74 -GCVGIFHTASPI----------DFAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVL  139 (322)
T ss_dssp             -TCSEEEECCCCC------------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEE
T ss_pred             -CCCEEEEcCCcc----------cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeec
Confidence             589999999632          111122 35689999999999999986531   3579999999875432211     


Q ss_pred             ----------------C-ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          165 ----------------P-HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       165 ----------------~-~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                      . ..|+.||++.+.+++.++.+   +|+++++++||.|.+|.......            ... 
T Consensus       140 ~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~------------~~~-  203 (322)
T 2p4h_X          140 DESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLP------------DSI-  203 (322)
T ss_dssp             CTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCC------------HHH-
T ss_pred             CCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCC------------chH-
Confidence                            1 15999999988888776654   58999999999999986432111            000 


Q ss_pred             HHHHHHHhhhh--cccC--CCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          228 EKMEELVRGLA--NLKG--VTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       228 ~~~~~~~~~~~--~~~~--~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ........+..  .+..  .++.++|+|++++++++...  .+|+ +++.+
T Consensus       204 ~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          204 EKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             HHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             HHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            11111111100  0101  36799999999999996532  5777 44543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.88  E-value=5.5e-22  Score=175.36  Aligned_cols=240  Identities=14%  Similarity=0.078  Sum_probs=162.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh------hHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA------GIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~------~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+.+.+ .+.++.++.+|++|.+++.++++.  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence            4789999999999999999999999999999885432      1222222221 245688999999999998887764  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------  161 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------  161 (285)
                        + .+|+|||+||.....        .+.+++.+.+++|+.++..+++++..    .+.++||++||...+..      
T Consensus        80 --~-~~d~vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           80 --Y-SFMAVIHFAGLKAVG--------ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             --C-CEEEEEECCSCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             --c-CCCEEEECCCCcCcc--------chhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCc
Confidence              2 799999999964220        13456778999999999999987644    34579999999765421      


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh
Q 040531          162 ------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR  235 (285)
Q Consensus       162 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                            .|....|+.+|++++.+++.++.+  ..++++..++|+.+..+.....+....    ........ ..+.....
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~----~~~~~~~~-~~~~~~~~  217 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDP----QGIPNNLM-PYVSQVAI  217 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCC----SSSCCSHH-HHHHHHHH
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCc----ccchhhHH-HHHHHHHH
Confidence                  122678999999999999999988  346999999999888763211110000    00000111 11111111


Q ss_pred             -hhh--------------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          236 -GLA--------------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       236 -~~~--------------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                       ...              .....++.++|+|++++.++........++.+++.+|...
T Consensus       218 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          218 GRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             TSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             hcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence             100              0111356789999999998865322223489999877543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=1.4e-21  Score=175.08  Aligned_cols=232  Identities=16%  Similarity=0.048  Sum_probs=156.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-----hHHHHHHhhcCCC-ceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-----GIALADSLLSSSP-LVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.+...+. ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998654     2221111111123 6889999999999998887754   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEccccccc--------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLM--------  160 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~--------  160 (285)
                        ++|+|||+||....        ..+.+++...+++|+.++..+++++.+...+ .+.++||++||...+.        
T Consensus       106 --~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV--------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             --CCCEEEECCcccCc--------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence              69999999996421        1234668889999999999999999987643 2346999999976543        


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          161 --GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       161 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                        +..+...|+.+|++.+.+++.++.++.   +.+..+.|..+..|.....+..           ......+.....+..
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~~r~~~~~gp~~~~~~~~-----------~~~~~~~~~~~~g~~  241 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYREAYG---LFACNGILFNHESPRRGENFVT-----------RKITRALGRIKVGLQ  241 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTSCTTSHH-----------HHHHHHHHHHHHTSC
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHhC---CcEEEEEeCceeCCCCCCcchh-----------HHHHHHHHHHHcCCC
Confidence              223467899999999999999998863   4444444443333221100000           000011111111100


Q ss_pred             --------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 --------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 --------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                              .....++.++|+|+++++++....    ++.+++.+|...
T Consensus       242 ~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          242 TKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             CCEEESCTTCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             CeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence                    111236789999999999997653    478888888643

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=2.6e-21  Score=172.89  Aligned_cols=230  Identities=11%  Similarity=0.019  Sum_probs=157.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-----hHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-----GIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.... ...++.++.+|++|.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997653     1111111000 1346889999999999998887754   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--------  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--------  161 (285)
                        ++|+|||+||....        ..+.++++..+++|+.++..+++++.+... ++.++||++||...+..        
T Consensus       102 --~~d~vih~A~~~~~--------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E  170 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV--------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKE  170 (375)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             --CCCEEEECCCcccc--------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCc
Confidence              69999999996421        113466788999999999999999987654 22479999999766432        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          162 ---GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       162 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                         ..+...|+.+|++++.+++.++.++   ++.+..+.|+.+..|.....+..           ......+.....+..
T Consensus       171 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~-----------~~~~~~~~~~~~g~~  236 (375)
T 1t2a_A          171 TTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVT-----------RKISRSVAKIYLGQL  236 (375)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHH-----------HHHHHHHHHHHHTSC
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcch-----------HHHHHHHHHHHcCCC
Confidence               1245689999999999999999875   57777788877765532111000           000111111111110


Q ss_pred             c--c------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          239 N--L------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       239 ~--~------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .  .      ...++.++|+|++++.++....    ++.+++.+|..
T Consensus       237 ~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          237 ECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             SCEEESCTTCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             ceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence            0  1      1235789999999999886543    35677766643

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.88  E-value=1.5e-21  Score=174.25  Aligned_cols=236  Identities=11%  Similarity=0.099  Sum_probs=165.5

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC-CHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS-LEQDIQNLIN   84 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s-~~~~i~~~~~   84 (285)
                      +.-|..|+++++|||||+|+||++++++|+++ |++|++++|+.+......+     ..++.++.+|++ |.+++.++++
T Consensus        16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH
T ss_pred             hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc
Confidence            33455678899999999999999999999998 9999999998766443321     357899999999 9999888776


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC--
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG--  162 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~--  162 (285)
                             .+|+|||+|+.....        ...++..+.+++|+.++..+++++...    + .++|++||...+...  
T Consensus        91 -------~~d~Vih~A~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~  150 (372)
T 3slg_A           91 -------KCDVILPLVAIATPA--------TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCAD  150 (372)
T ss_dssp             -------HCSEEEECBCCCCHH--------HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCC
T ss_pred             -------cCCEEEEcCccccHH--------HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCC
Confidence                   599999999975321        123456678999999999999988653    3 689999996543221  


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHH
Q 040531          163 ----------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE  226 (285)
Q Consensus       163 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                      .+...|+.+|.+.+.+++.++.+    ++++..++|+.+.+|.....+...      .......
T Consensus       151 ~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~------~~~~~~~  220 (372)
T 3slg_A          151 EQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPK------EGSSRVV  220 (372)
T ss_dssp             SSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSB------SCSCHHH
T ss_pred             CCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccc------cccchHH
Confidence                            12237999999999999998765    799999999999887643211100      0000111


Q ss_pred             HHHHHHHHhhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC-Ccc
Q 040531          227 EEKMEELVRGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDG-GFT  277 (285)
Q Consensus       227 ~~~~~~~~~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg-G~~  277 (285)
                      ...+.....+...       ....++.++|+|++++.++........|+.+++.+ |..
T Consensus       221 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          221 TQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             HHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             HHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence            1222222222111       11135789999999999997765456899999998 543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=2e-21  Score=170.88  Aligned_cols=230  Identities=15%  Similarity=0.050  Sum_probs=158.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH-HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -.++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+ ....++.++.+|++|.+++.++++..     
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc-cccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            35788999999999999999999999999999999865421 111222 12346889999999999998887754     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccCCC-------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMGGL-------  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~~~-------  163 (285)
                      ++|+|||+||....        ..+.+++...+++|+.++..+++++.+.    + .+++|++||...+.+.+       
T Consensus        86 ~~d~Vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~  153 (335)
T 1rpn_A           86 QPQEVYNLAAQSFV--------GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDEN  153 (335)
T ss_dssp             CCSEEEECCSCCCH--------HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             CCCEEEECccccch--------hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcc
Confidence            69999999996421        0112346788999999999999998664    3 37899999976543221       


Q ss_pred             ----CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          164 ----GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       164 ----~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                          +...|+.+|++.+.+++.++.++   ++.+..+.|+.+..|.....+..           ......+.....+...
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~-----------~~~~~~~~~~~~g~~~  219 (335)
T 1rpn_A          154 TPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVT-----------RKVTDAVARIKLGKQQ  219 (335)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHH-----------HHHHHHHHHHHTTSCS
T ss_pred             cCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcch-----------HHHHHHHHHHHcCCCc
Confidence                24579999999999999998875   57888899988877643211000           0011111111111100


Q ss_pred             --c------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          240 --L------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       240 --~------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                        .      ...++.++|+|++++.++....    ++.+++.+|...
T Consensus       220 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          220 ELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             CEEESCTTCEEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             eEEeCCCcceeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence              1      1125678999999999986543    367787776543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.88  E-value=2.3e-22  Score=171.62  Aligned_cols=180  Identities=19%  Similarity=0.133  Sum_probs=142.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.....         ..++.++.+|++|.+++.++++       .+|+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            68999999999999999999999999999999875311         1357889999999998887765       5999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------------  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------------  163 (285)
                      ||||||...            .+.+.+.+++|+.++..+++++.+    .+.++||++||.......+            
T Consensus        67 vi~~a~~~~------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~  130 (267)
T 3ay3_A           67 IIHLGGVSV------------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRR  130 (267)
T ss_dssp             EEECCSCCS------------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCC
T ss_pred             EEECCcCCC------------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCC
Confidence            999999641            133678899999999999999865    3467999999987653322            


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCcc-chhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVA-TSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      +...|+.+|++++.+++.++.   ++++++++++||.+. ++...                    +.           ..
T Consensus       131 ~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~~--------------------~~-----------~~  176 (267)
T 3ay3_A          131 PDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKDA--------------------RM-----------MA  176 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCSH--------------------HH-----------HH
T ss_pred             CCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCCC--------------------Ce-----------ee
Confidence            347899999999999998865   468999999999984 32110                    00           01


Q ss_pred             CCCCHHHHHHHHHHHhcCC
Q 040531          243 VTLKARDIAEAALYLASDE  261 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~  261 (285)
                      ..+.++|+|++++.++...
T Consensus       177 ~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          177 TWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HBCCHHHHHHHHHHHHHSS
T ss_pred             ccccHHHHHHHHHHHHhCC
Confidence            2468999999999998654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=7.4e-22  Score=164.25  Aligned_cols=208  Identities=11%  Similarity=-0.038  Sum_probs=153.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|+||++++++|+++|++|++++|+.+....       ...++.++.+|++|.+++.++++       .+|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------ENEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------CCTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------ccCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            689999999999999999999999999999998776422       13578999999999999888765       5999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC----------CC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL----------GP  165 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~----------~~  165 (285)
                      |||+||....              ..+.+++|+.++..+++++.+    .+..++|++||.+...+.+          +.
T Consensus        71 vi~~a~~~~~--------------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~  132 (227)
T 3dhn_A           71 VISAFNPGWN--------------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPE  132 (227)
T ss_dssp             EEECCCC--------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCG
T ss_pred             EEEeCcCCCC--------------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchH
Confidence            9999986421              012678899999998888755    3456899999987654332          35


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+.+|++.+.+.+.++.   ..+++++.++||.+.++.........    ....+..             ......++
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~----~~~~~~~-------------~~~~~~~i  192 (227)
T 3dhn_A          133 NILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRL----GKDDMIV-------------DIVGNSHI  192 (227)
T ss_dssp             GGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEE----ESSBCCC-------------CTTSCCEE
T ss_pred             HHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceee----cCCCccc-------------CCCCCcEE
Confidence            7899999999999988876   36899999999999887532111000    0000000             00012357


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .++|+|++++.++.+..  ..|+.+.+.+.-.
T Consensus       193 ~~~Dva~ai~~~l~~~~--~~g~~~~~~~~~~  222 (227)
T 3dhn_A          193 SVEDYAAAMIDELEHPK--HHQERFTIGYLEH  222 (227)
T ss_dssp             EHHHHHHHHHHHHHSCC--CCSEEEEEECCSC
T ss_pred             eHHHHHHHHHHHHhCcc--ccCcEEEEEeehh
Confidence            89999999999996653  5899998877543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=1.8e-22  Score=179.23  Aligned_cols=228  Identities=15%  Similarity=0.136  Sum_probs=156.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |.+++++++|||||+|+||++++++|+++| +.|++++|+.....  .+.+    .++. +.+|+++.+.++.+++.  .
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VDLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TTSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cCce-EeeecCcHHHHHHHHhh--c
Confidence            445788999999999999999999999999 99999998765421  1111    1222 77899998888777652  1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-----
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-----  163 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-----  163 (285)
                      .++++|+|||+||....          +.+++++.+++|+.++..+++++.+.    +. ++|++||...+...+     
T Consensus       112 ~~~~~d~Vih~A~~~~~----------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~  176 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSST----------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIE  176 (357)
T ss_dssp             CCSSCCEEEECCSCCCT----------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCS
T ss_pred             ccCCCCEEEECCcccCC----------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcC
Confidence            24579999999997521          22346788999999999999998773    34 899999986643322     


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          164 ------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       164 ------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                            +...|+.+|++.+.+++.++.+   .+++++.++|+.+.+|........          .......+.....+.
T Consensus       177 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~----------~~~~~~~~~~~~~~~  243 (357)
T 2x6t_A          177 SREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSM----------ASVAFHLNTQLNNGE  243 (357)
T ss_dssp             SGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGG----------SCHHHHHHHHHHTTC
T ss_pred             CcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCccc----------chHHHHHHHHHHcCC
Confidence                  2568999999999999998876   479999999999988753210000          000111111211111


Q ss_pred             h-------cc-cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          238 A-------NL-KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       238 ~-------~~-~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .       .. ...++.++|+|+++++++....    |+.+++.+|...
T Consensus       244 ~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          244 SPKLFEGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             CCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             CcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence            0       11 2245789999999999997653    889999888644

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.87  E-value=2.5e-21  Score=170.70  Aligned_cols=227  Identities=15%  Similarity=0.122  Sum_probs=159.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~~i   93 (285)
                      +++|||||+|+||++++++|+++ |++|++++|+.+....+.     ...++.++.+|++| .+.+.++++       .+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            47999999999999999999998 899999999876643221     23568899999998 455666554       48


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL----------  163 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~----------  163 (285)
                      |+|||+||.....        ...+++.+.+++|+.++..+++++.+    .+ .++|++||.......+          
T Consensus        69 d~vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~  135 (345)
T 2bll_A           69 DVVLPLVAIATPI--------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSN  135 (345)
T ss_dssp             SEEEECBCCCCHH--------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             CEEEEcccccCcc--------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccc
Confidence            9999999974220        11345677899999999999988855    23 7899999976542211          


Q ss_pred             --------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh
Q 040531          164 --------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR  235 (285)
Q Consensus       164 --------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                              +...|+.+|++.+.+++.++.+.   ++++++++||.+.++.........      ..........+.....
T Consensus       136 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~  206 (345)
T 2bll_A          136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAAR------IGSSRAITQLILNLVE  206 (345)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSB------SCBCHHHHHHHHHHHH
T ss_pred             cccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccc------cccccHHHHHHHHHHc
Confidence                    12279999999999999998874   799999999999887642110000      0000011122222222


Q ss_pred             hhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          236 GLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       236 ~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      +...       ....++.++|+|+++++++........|+.+++.+|.
T Consensus       207 ~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          207 GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             TCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            2110       1113678999999999999765444689999999874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=9.8e-22  Score=173.42  Aligned_cols=226  Identities=19%  Similarity=0.129  Sum_probs=156.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCC-------CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHG-------AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ...|+++++|||||+|+||++++++|+++|       ++|++++|+.+....      ....++.++.+|++|.+++.++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHH
Confidence            345789999999999999999999999999       799999998654321      1245688999999999988877


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccC
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMG  161 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~  161 (285)
                      ++      +.+|+|||+||...         ..+.+++.+.+++|+.++..+++++.+...++ ..++||++||...+.+
T Consensus        83 ~~------~~~d~vih~A~~~~---------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVS---------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             HH------TCCSEEEECCCCCH---------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCS
T ss_pred             Hh------cCCCEEEECCccCc---------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCC
Confidence            64      47999999999642         12356688999999999999999987753211 2478999999866543


Q ss_pred             C-C----------CCccchhhHHHHHHHHHHHHHHhC--CCCcEEEEEe--CCCccchhhhhhhcccccccCCCCCchHH
Q 040531          162 G-L----------GPHAYTVSKHAIVGLTKNTACELG--KYGIRVNCIS--PFGVATSMLVNAWKSCEDCMDSGKPCEEE  226 (285)
Q Consensus       162 ~-~----------~~~~Y~asKaa~~~l~~~la~e~~--~~~i~v~~v~--pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      . +          +...|+.+|++.+.+++.++.+..  ...+|++.+.  ||.+.++... .                .
T Consensus       148 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~----------------~  210 (342)
T 2hrz_A          148 PLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-F----------------F  210 (342)
T ss_dssp             SCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-H----------------H
T ss_pred             CCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-H----------------H
Confidence            2 2          467899999999999999887631  1225565655  6665443211 0                0


Q ss_pred             HHHHHHHHhhhh--cccC-----CCCCHHHHHHHHHHHhcCCCC-cccccEEEec
Q 040531          227 EEKMEELVRGLA--NLKG-----VTLKARDIAEAALYLASDESK-YISGHNLVVD  273 (285)
Q Consensus       227 ~~~~~~~~~~~~--~~~~-----~~~~~eeva~~~~~l~s~~~~-~~~G~~i~vd  273 (285)
                      ...+.....+..  .+.+     .++.++|+|++++.++..... ...|+.+++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          211 SNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             HHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             HHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence            011111111110  0111     146799999999998854321 1146788874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=1.6e-21  Score=170.15  Aligned_cols=210  Identities=15%  Similarity=0.086  Sum_probs=124.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.            .+  ++.+|++|.+++.++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            5789999999999999999999999999999986543            11  6789999999988887654     699


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC----------CCC
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG----------GLG  164 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~----------~~~  164 (285)
                      +|||+||....        ..+.+++++.+++|+.++..+++++.+.    + +++|++||.....+          ..+
T Consensus        63 ~vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~  129 (315)
T 2ydy_A           63 VIVHCAAERRP--------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAP  129 (315)
T ss_dssp             EEEECC---------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             EEEECCcccCh--------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCC
Confidence            99999997532        1245678889999999999999998763    2 48999999876543          234


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh---hhhcccccccCCCCCchHHHHHHHHHH-hhh---
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV---NAWKSCEDCMDSGKPCEEEEEKMEELV-RGL---  237 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  237 (285)
                      ...|+.+|++.+.+++.++.+       +..++|+.+..+...   .....                ...... .+.   
T Consensus       130 ~~~Y~~sK~~~e~~~~~~~~~-------~~~lR~~~v~G~~~~~~~~~~~~----------------~~~~~~~~~~~~~  186 (315)
T 2ydy_A          130 LNLYGKTKLDGEKAVLENNLG-------AAVLRIPILYGEVEKLEESAVTV----------------MFDKVQFSNKSAN  186 (315)
T ss_dssp             CSHHHHHHHHHHHHHHHHCTT-------CEEEEECSEECSCSSGGGSTTGG----------------GHHHHHCCSSCEE
T ss_pred             cCHHHHHHHHHHHHHHHhCCC-------eEEEeeeeeeCCCCcccccHHHH----------------HHHHHHhcCCCee
Confidence            578999999999999987432       245555555443221   11000                000111 000   


Q ss_pred             --hcccCCCCCHHHHHHHHHHHhcCC-CCcccccEEEecCCcccc
Q 040531          238 --ANLKGVTLKARDIAEAALYLASDE-SKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       238 --~~~~~~~~~~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~~~~  279 (285)
                        .......+.++|+|+++++++++. .....|+.+++.+|...+
T Consensus       187 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          187 MDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             EECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred             eccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence              112345678999999999998653 223578999999986543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.87  E-value=5.5e-21  Score=158.54  Aligned_cols=199  Identities=14%  Similarity=0.019  Sum_probs=141.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|+||++++++|+++|++|++++|+.+.+..+.      ..++.++++|++|.++         +.++.+|+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~---------~~~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE---------ADLDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH---------hhcccCCEE
Confidence            5999999999999999999999999999999987765432      3468899999999877         223579999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCC------------
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLG------------  164 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~------------  164 (285)
                      |||||....     + .  .       .++|+.++    +.+++.+++.+ +++|++||.++..+.+.            
T Consensus        67 i~~ag~~~~-----~-~--~-------~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~  126 (224)
T 3h2s_A           67 VDALSVPWG-----S-G--R-------GYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESA  126 (224)
T ss_dssp             EECCCCCTT-----S-S--C-------THHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGG
T ss_pred             EECCccCCC-----c-c--h-------hhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCC
Confidence            999997521     0 0  0       24566665    45555566666 99999999877655443            


Q ss_pred             --CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          165 --PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       165 --~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                        ...|+.+|++.+.+ +.   .....++++..++||.+.++.....+.....    ..+              ......
T Consensus       127 ~~~~~y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~----~~~--------------~~~~~~  184 (224)
T 3h2s_A          127 ASQPWYDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPSGPATSYVAGKD----TLL--------------VGEDGQ  184 (224)
T ss_dssp             GGSTTHHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCCCCCCCEEEESS----BCC--------------CCTTSC
T ss_pred             ccchhhHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCCCcccCceeccc----ccc--------------cCCCCC
Confidence              57899999999854 22   2245789999999999998732211111000    000              001123


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ..+.++|+|++++.++....  ..|+.+++-|
T Consensus       185 ~~i~~~DvA~~~~~~l~~~~--~~g~~~~~~~  214 (224)
T 3h2s_A          185 SHITTGNMALAILDQLEHPT--AIRDRIVVRD  214 (224)
T ss_dssp             CBCCHHHHHHHHHHHHHSCC--CTTSEEEEEE
T ss_pred             ceEeHHHHHHHHHHHhcCcc--ccCCEEEEec
Confidence            46899999999999996653  4788888754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=7.4e-21  Score=171.10  Aligned_cols=172  Identities=22%  Similarity=0.180  Sum_probs=133.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCchh---------hHHHHHHhhcC-----CCc---eEEEeccCCCH
Q 040531           15 GKIAIVTGGARGIGEATVRLFV-KHGAKVVIADIDDAA---------GIALADSLLSS-----SPL---VTYLHCDVSLE   76 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la-~~g~~v~~~~r~~~~---------~~~~~~~~~~~-----~~~---v~~~~~D~s~~   76 (285)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         ...+.+.+.+.     ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987554         23332212211     124   88999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      +++.+++++    ++++|+|||+||.....        .+.+++++.+++|+.++..+++++..    .+.++||++||.
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~  145 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSA  145 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--------cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCH
Confidence            998877653    45699999999975220        13456788999999999999998754    345799999996


Q ss_pred             ccccCCC------------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          157 ASLMGGL------------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       157 ~~~~~~~------------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                      .......                  +...|+.+|++++.+++.++.++   ++++++++|+.+.++.
T Consensus       146 ~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          146 AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             HHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            5432211                  25689999999999999999986   7999999999998774

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.86  E-value=1.4e-20  Score=165.19  Aligned_cols=231  Identities=14%  Similarity=0.086  Sum_probs=159.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.....   +.+   ..++.++.+|++|.+++.+++++     ..+|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---TEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---CTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---CCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            57999999999999999999999999999998765422   112   23688899999999998887764     37999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~  164 (285)
                      |||+||....        ..+.+++.+.+++|+.++..+++++..    .+.+++|++||......           ..+
T Consensus        71 vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~  138 (330)
T 2c20_A           71 VMHFAADSLV--------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNP  138 (330)
T ss_dssp             EEECCCCCCH--------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred             EEECCcccCc--------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCC
Confidence            9999997421        013456788999999999999998754    34578999999765432           123


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc-----
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN-----  239 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  239 (285)
                      ...|+.+|++.+.+++.++.+   .++++..++|+.+.++.....+...     .... ......+.........     
T Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~g~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~  209 (330)
T 2c20_A          139 TNTYGETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGATPNGIIGED-----HRPE-THLIPLVLQVALGQREKIMMF  209 (330)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHT---SSCEEEEEECSEEECCCTTCSSCCC-----CSSC-CSHHHHHHHHHTTSSSCEEEE
T ss_pred             CChHHHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCcCccccc-----cccc-cchHHHHHHHHhhcCCCeEEe
Confidence            578999999999999999876   3799999999999887422111000     0000 0011111111111000     


Q ss_pred             ----------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          240 ----------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       240 ----------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                                ....++.++|+|++++.++......-.|+.+++.+|...
T Consensus       210 g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          210 GDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             CSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             CCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence                      011246789999999988854322224688888776544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.86  E-value=2.1e-20  Score=154.49  Aligned_cols=204  Identities=12%  Similarity=0.064  Sum_probs=134.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|+||++++++|+++|++|++++|+.+.+..+.       .++.++.+|++|.++  +       .+..+|+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~-------~~~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--S-------DLSDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--H-------HHTTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--h-------hhcCCCEE
Confidence            5999999999999999999999999999999987755432       468899999999877  2       23579999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------------C
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------------G  164 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------------~  164 (285)
                      ||+||....                 ..++|+.+    .+.+++.+++.+.+++|++||.++..+.+            +
T Consensus        66 i~~ag~~~~-----------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~  124 (221)
T 3ew7_A           66 VDAYGISPD-----------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLRE  124 (221)
T ss_dssp             EECCCSSTT-----------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------
T ss_pred             EECCcCCcc-----------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCC
Confidence            999997321                 02335444    44555556666678999999987765433            2


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhh-hcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNA-WKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ...|+.+|++.+.+. .+..  ...++++..++||.+.++..... +..             ..+.+.     .......
T Consensus       125 ~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~-------------~~~~~~-----~~~~~~~  183 (221)
T 3ew7_A          125 APYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQI-------------GKDHLL-----FGSDGNS  183 (221)
T ss_dssp             CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------------------------
T ss_pred             HHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEe-------------ccccce-----ecCCCCc
Confidence            456999999999873 3322  15689999999999998721110 000             000000     0011124


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      .++++|+|++++.++.+..  ..|+.+++-+-...+.
T Consensus       184 ~i~~~Dva~~~~~~l~~~~--~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          184 FISMEDYAIAVLDEIERPN--HLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             CCCHHHHHHHHHHHHHSCS--CTTSEEECCC------
T ss_pred             eEeHHHHHHHHHHHHhCcc--ccCCEEEECCCCcccc
Confidence            6799999999999996653  5799999887666544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=4.5e-22  Score=175.32  Aligned_cols=233  Identities=20%  Similarity=0.191  Sum_probs=147.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH--HHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL--ADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~--~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+.....  ...+. ...++.++++|++|.+++.++++       .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence            68999999999999999999999999999988876532211  11222 23468889999999888777654       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----C-----
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----G-----  162 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----~-----  162 (285)
                      +|+|||+|+....       .  ..+..++.+++|+.++..+++++.+..   +.++||++||.++..+     .     
T Consensus        81 ~D~Vih~A~~~~~-------~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~  148 (338)
T 2rh8_A           81 CDFVFHVATPVHF-------A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVD  148 (338)
T ss_dssp             CSEEEEESSCCCC------------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred             CCEEEEeCCccCC-------C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccC
Confidence            8999999985311       0  111224589999999999999987642   2578999999763211     0     


Q ss_pred             -----------C---CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH
Q 040531          163 -----------L---GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE  228 (285)
Q Consensus       163 -----------~---~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                                 +   ....|+.||++.+.+++.++.+   +|+++++++|+.|.+|...............  .......
T Consensus       149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~--~~~g~~~  223 (338)
T 2rh8_A          149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMS--LITGNEF  223 (338)
T ss_dssp             TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHH--HHHTCHH
T ss_pred             hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHH--HHcCCcc
Confidence                       0   1125999999999999888765   4799999999999998643211100000000  0000000


Q ss_pred             HHHHHHhhhhcccC--CCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          229 KMEELVRGLANLKG--VTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       229 ~~~~~~~~~~~~~~--~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      .+.. ........+  .++.++|+|++++++++..  ...|..+..+++
T Consensus       224 ~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~  269 (338)
T 2rh8_A          224 LING-MKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYICCAAN  269 (338)
T ss_dssp             HHHH-HHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEECSEE
T ss_pred             cccc-ccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEEecCC
Confidence            0000 000000011  3678999999999998653  235665444443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.85  E-value=1.3e-20  Score=166.50  Aligned_cols=228  Identities=11%  Similarity=0.032  Sum_probs=152.0

Q ss_pred             cccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            6 EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +.++...++++++|||||+|+||++++++|+++|++|++++|+........+.+. ...++.++.+|+++..        
T Consensus        18 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~--------   88 (343)
T 2b69_A           18 YFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL--------   88 (343)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC--------
T ss_pred             ccccccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh--------
Confidence            4455556789999999999999999999999999999999986543221111221 1356889999998742        


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-----
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-----  160 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-----  160 (285)
                          +..+|+|||+||.....    .    ..+++...+++|+.++..+++++.+.    + .++|++||...+.     
T Consensus        89 ----~~~~d~vih~A~~~~~~----~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~  151 (343)
T 2b69_A           89 ----YIEVDQIYHLASPASPP----N----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVH  151 (343)
T ss_dssp             ----CCCCSEEEECCSCCSHH----H----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSS
T ss_pred             ----hcCCCEEEECccccCch----h----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCC
Confidence                35799999999974320    0    11235678999999999999988653    2 3899999976542     


Q ss_pred             -----------CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHH
Q 040531          161 -----------GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEK  229 (285)
Q Consensus       161 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                 +..+...|+.+|++.+.+++.++.+.   +++++.++||.+.+|......            .......
T Consensus       152 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~------------~~~~~~~  216 (343)
T 2b69_A          152 PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMND------------GRVVSNF  216 (343)
T ss_dssp             SBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTC------------CCHHHHH
T ss_pred             CCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCc------------ccHHHHH
Confidence                       12234579999999999999998874   799999999999887532100            0011111


Q ss_pred             HHHHHhhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          230 MEELVRGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       230 ~~~~~~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +.....+...       ....++.++|+|++++.++...    .|+.+++.+|...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~  268 (343)
T 2b69_A          217 ILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  268 (343)
T ss_dssp             HHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             HHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence            2222221110       1122568999999999998654    2677888877543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.85  E-value=7.6e-21  Score=164.05  Aligned_cols=200  Identities=14%  Similarity=0.089  Sum_probs=147.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .-..+++|||||+|+||++++++|+++|++|++++|+                     .+|++|.+++.++++..     
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----
Confidence            3467899999999999999999999999999999985                     37999999998887654     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC--------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL--------  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~--------  163 (285)
                      ++|+|||+||....        +.+.+++++.+++|+.++..+++++.+.    +. ++|++||...+.+.+        
T Consensus        63 ~~d~vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~~-~iv~~SS~~v~~~~~~~~~~E~~  129 (292)
T 1vl0_A           63 KPNVVINCAAHTAV--------DKCEEQYDLAYKINAIGPKNLAAAAYSV----GA-EIVQISTDYVFDGEAKEPITEFD  129 (292)
T ss_dssp             CCSEEEECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----TC-EEEEEEEGGGSCSCCSSCBCTTS
T ss_pred             CCCEEEECCccCCH--------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEechHHeECCCCCCCCCCCC
Confidence            69999999996421        1234668889999999999999998763    23 899999976543322        


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh--
Q 040531          164 ---GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA--  238 (285)
Q Consensus       164 ---~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  238 (285)
                         +...|+.+|++.+.+++.++.       .+..++|+.+.++ .....                ............  
T Consensus       130 ~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~----------------~~~~~~~~~~~~~~  185 (292)
T 1vl0_A          130 EVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV----------------KTMINLGKTHDELK  185 (292)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH----------------HHHHHHHHHCSEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH----------------HHHHHHHhcCCcEE
Confidence               356899999999999988643       3678888888765 21111                011111111110  


Q ss_pred             ---cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 ---NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ---~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                         .....++.++|+|+++++++++.    .|+.+++.+|...
T Consensus       186 ~~~~~~~~~i~v~Dva~~~~~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          186 VVHDQVGTPTSTVDLARVVLKVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             EESSCEECCEEHHHHHHHHHHHHHHT----CCEEEECCCBSCE
T ss_pred             eecCeeeCCccHHHHHHHHHHHHhcC----CCcEEEecCCCCc
Confidence               11234678999999999999764    6899999988644

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.85  E-value=1.9e-20  Score=179.31  Aligned_cols=230  Identities=16%  Similarity=0.146  Sum_probs=161.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHH-HHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD-IQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~i~~~~   90 (285)
                      ++++++|||||+|+||++++++|+++ |++|++++|+.......    . ...++.++.+|+++.++ ++++++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L-NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T-TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c-cCCceEEEECCCCCcHHHHHHhhc------
Confidence            57899999999999999999999998 89999999987654321    1 23568899999998764 555543      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-------
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-------  163 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-------  163 (285)
                       .+|+|||+||.....        ...+++.+.+++|+.++..+++++.+    .+ +++|++||...+...+       
T Consensus       382 -~~D~Vih~Aa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~  447 (660)
T 1z7e_A          382 -KCDVVLPLVAIATPI--------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDED  447 (660)
T ss_dssp             -HCSEEEECCCCCCTH--------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTT
T ss_pred             -CCCEEEECceecCcc--------ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCC
Confidence             589999999974320        12345678899999999999998865    23 7999999976542211       


Q ss_pred             -----------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH
Q 040531          164 -----------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE  232 (285)
Q Consensus       164 -----------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                                 +...|+.+|++.+.+++.++.+.   ++++++++||.+.++.........   .   .........+..
T Consensus       448 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~---~---~~~~~~~~~~~~  518 (660)
T 1z7e_A          448 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAAR---I---GSSRAITQLILN  518 (660)
T ss_dssp             TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHT---T---TCSCHHHHHHHH
T ss_pred             ccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCcccccccc---c---cccchHHHHHHH
Confidence                       12369999999999999998875   799999999999987642110000   0   000011112222


Q ss_pred             HHhhhhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          233 LVRGLAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       233 ~~~~~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      ...+...       ....++.++|+|++++++++....+..|+.+++++|.
T Consensus       519 ~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          519 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             HHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             HHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            2222110       1112577999999999999776555689999999984

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.85  E-value=6e-20  Score=161.66  Aligned_cols=169  Identities=16%  Similarity=0.137  Sum_probs=126.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+.+ .+.++.++.+|++|.+++.++++.    + ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----H-AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----T-TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc----c-CCCE
Confidence            699999999999999999999999999998643221111122211 134678899999999998887764    2 6999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------C-C
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------G-L  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~-~  163 (285)
                      ||||||.....        ...++..+.+++|+.++..+++++..    .+.++||++||......           . +
T Consensus        77 vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  144 (338)
T 1udb_A           77 VIHFAGLKAVG--------ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGT  144 (338)
T ss_dssp             EEECCSCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             EEECCccCccc--------cchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence            99999964210        12344667899999999999987644    34578999999765421           1 2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      ....|+.+|++++.+++.++.+.  .++++..+.|+.+..+
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            36789999999999999999884  2689999998777654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=1.3e-22  Score=167.30  Aligned_cols=201  Identities=13%  Similarity=0.015  Sum_probs=146.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.+.          ...++.++.+|+++.+++.+++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            468999999999999999999999998  99999998764          1346888899998876655443        


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                       +|+|||+||....          +.+++++.+++|+.++..+++++.+    .+.+++|++||.....  ++...|+.+
T Consensus        66 -~d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~--~~~~~y~~s  128 (215)
T 2a35_A           66 -IDTAFCCLGTTIK----------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRV  128 (215)
T ss_dssp             -CSEEEECCCCCHH----------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHH
T ss_pred             -hcEEEECeeeccc----------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCC--CCccHHHHH
Confidence             8999999996421          2345778899999999999998765    3456899999987653  235689999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcE-EEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIR-VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      |++++.+++.       .+++ ++.++||.+.++.....+...  ......+   ...   .        ....+.++|+
T Consensus       129 K~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~--~~~~~~~---~~~---~--------~~~~i~~~Dv  185 (215)
T 2a35_A          129 KGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEI--LAAPIAR---ILP---G--------KYHGIEACDL  185 (215)
T ss_dssp             HHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGG--TTCCCC----------C--------HHHHHHHHHH
T ss_pred             HHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHH--HHHhhhh---ccC---C--------CcCcEeHHHH
Confidence            9999998865       3798 999999999988643111110  0000000   000   0        0113478999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      |++++.++.+..    ++.+++.++-
T Consensus       186 a~~~~~~~~~~~----~~~~~i~~~~  207 (215)
T 2a35_A          186 ARALWRLALEEG----KGVRFVESDE  207 (215)
T ss_dssp             HHHHHHHHTCCC----SEEEEEEHHH
T ss_pred             HHHHHHHHhcCC----CCceEEcHHH
Confidence            999999997653    6677776653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.85  E-value=2.9e-20  Score=161.95  Aligned_cols=210  Identities=17%  Similarity=0.106  Sum_probs=153.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|+||++++++|+++|++|++++|++....  .+       ++.++.+|++ .+++.++++       .+|+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~~-------~~d~   65 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQLN-------DVDA   65 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence            68999999999999999999999999999999843322  11       6889999999 888877654       7999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~  164 (285)
                      |||+|+.....            +..+.+++|+.++..+++++..    .+..++|++||...+..           ..+
T Consensus        66 Vih~a~~~~~~------------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p  129 (311)
T 3m2p_A           66 VVHLAATRGSQ------------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLP  129 (311)
T ss_dssp             EEECCCCCCSS------------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCC
T ss_pred             EEEccccCCCC------------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCC
Confidence            99999975321            2345688999999999998854    34568999999655321           113


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc----
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL----  240 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  240 (285)
                      ...|+.+|.+.+.+++.++.+   .++++..++|+.+.++.....              ......+.....+....    
T Consensus       130 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~--------------~~~~~~~~~~~~~~~~~~~g~  192 (311)
T 3m2p_A          130 DLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNN--------------YMINRFFRQAFHGEQLTLHAN  192 (311)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--C--------------CHHHHHHHHHHTCCCEEESSB
T ss_pred             CchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCC--------------CHHHHHHHHHHcCCCeEEecC
Confidence            468999999999999999886   579999999999988654310              01111222222211111    


Q ss_pred             ---cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          241 ---KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       241 ---~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                         ...++.++|+|++++.++....   .|+.+++.+|...
T Consensus       193 ~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          193 SVAKREFLYAKDAAKSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             CCCCEEEEEHHHHHHHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             CCeEEceEEHHHHHHHHHHHHhcCC---CCCeEEeCCCCcc
Confidence               1124678899999999997654   7899999887654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.83  E-value=6.5e-20  Score=159.52  Aligned_cols=221  Identities=13%  Similarity=0.084  Sum_probs=155.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|++|||||+|+||++++++|+++  |++|++++|+..... ..       .++.++.+|++|.+++.+++++.     .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-------~~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-------NSGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-------HSSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-------CCCceEEecCCCHHHHHHHHhhc-----C
Confidence            467999999999999999999999  899999999866532 11       13678899999999988887643     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC----------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG----------  162 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~----------  162 (285)
                      +|+|||+||....         ...+++.+.+++|+.++..+++++.+    .+.+++|++||...+.+.          
T Consensus        69 ~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~  135 (312)
T 2yy7_A           69 ITDIYLMAALLSA---------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYT  135 (312)
T ss_dssp             CCEEEECCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSC
T ss_pred             CCEEEECCccCCC---------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccC
Confidence            9999999986421         12355778899999999999998754    345689999997654321          


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc-
Q 040531          163 --LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN-  239 (285)
Q Consensus       163 --~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (285)
                        .+...|+.+|.+.+.+++.++.++   +++++.++|+.+.++.......          ........+......... 
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  202 (312)
T 2yy7_A          136 IMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGG----------TTDYAVDIFYKAIADKKYE  202 (312)
T ss_dssp             BCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSC----------TTTHHHHHHHHHHHTSEEE
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCc----------hhhhHHHHHHHHHcCCCeE
Confidence              135689999999999999998875   7999999999998754211000          000011111111111110 


Q ss_pred             c------cCCCCCHHHHHHHHHHHhcCCCCcc-cccEEEecC
Q 040531          240 L------KGVTLKARDIAEAALYLASDESKYI-SGHNLVVDG  274 (285)
Q Consensus       240 ~------~~~~~~~eeva~~~~~l~s~~~~~~-~G~~i~vdg  274 (285)
                      .      ...++.++|+|++++.++....... .|+.+++.|
T Consensus       203 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          203 CFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             ESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             EecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            0      1123678999999999986543323 257888864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=9.4e-20  Score=159.20  Aligned_cols=216  Identities=12%  Similarity=0.080  Sum_probs=151.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++++|||||+|+||++++++|+++|++|++++|+.                    .+|++|.+++.++++..     .+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~   56 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RI   56 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CC
Confidence            468999999999999999999999999999888752                    27999999988887643     69


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------  162 (285)
                      |+|||+|+....       .....++..+.+++|+.++..+++++.+    .+..++|++||...+...           
T Consensus        57 d~vih~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  125 (321)
T 1e6u_A           57 DQVYLAAAKVGG-------IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELL  125 (321)
T ss_dssp             SEEEECCCCCCC-------HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred             CEEEEcCeecCC-------cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccc
Confidence            999999986421       0112345678899999999999998865    334689999997654211           


Q ss_pred             --C---CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh--
Q 040531          163 --L---GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR--  235 (285)
Q Consensus       163 --~---~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  235 (285)
                        +   ....|+.+|.+.+.+++.++.+.   ++++++++|+.+.++.......          ........+.....  
T Consensus       126 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~  192 (321)
T 1e6u_A          126 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPS----------NSHVIPALLRRFHEAT  192 (321)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTT----------CSSHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCC----------CCccHHHHHHHHHHhh
Confidence              1   12489999999999999998874   7999999999998875421000          00011112222211  


Q ss_pred             -----hhhc-----ccCCCCCHHHHHHHHHHHhcCCCCc------ccccEEEecCCccc
Q 040531          236 -----GLAN-----LKGVTLKARDIAEAALYLASDESKY------ISGHNLVVDGGFTT  278 (285)
Q Consensus       236 -----~~~~-----~~~~~~~~eeva~~~~~l~s~~~~~------~~G~~i~vdgG~~~  278 (285)
                           .+..     ....++.++|+|++++.++......      ..|+.+++.+|...
T Consensus       193 ~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          193 AQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             HHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             hcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence                 1100     1112468999999999988654311      23688888776543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=4.3e-19  Score=163.70  Aligned_cols=232  Identities=13%  Similarity=0.033  Sum_probs=157.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHC---CCeEEEEecCchhhHHHHH---Hhhc------------CCCceEEEecc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKH---GAKVVIADIDDAAGIALAD---SLLS------------SSPLVTYLHCD   72 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~---g~~v~~~~r~~~~~~~~~~---~~~~------------~~~~v~~~~~D   72 (285)
                      ...++|+||||||+|+||++++++|++.   |++|++++|+.........   .+..            ...++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            3468999999999999999999999999   8999999998765432221   1110            13579999999


Q ss_pred             CC------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC
Q 040531           73 VS------LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR  146 (285)
Q Consensus        73 ~s------~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  146 (285)
                      ++      +.+++.++++       .+|+|||+||....            +.+.+.+++|+.++..+++++..    .+
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------------~~~~~~~~~Nv~gt~~ll~aa~~----~~  205 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------------FPYHELFGPNVAGTAELIRIALT----TK  205 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------------SSCCEEHHHHHHHHHHHHHHHTS----SS
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------------cCHHHHHHHHHHHHHHHHHHHHh----CC
Confidence            98      5566666654       58999999997532            12345789999999999988743    44


Q ss_pred             CceEEEEcccccccCCCC----------------------CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          147 SGCIISTASVASLMGGLG----------------------PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       147 ~g~ii~vss~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                      ..++|++||.+.......                      ...|+.+|.+.+.+++.++.+.   |+++++++||.|.++
T Consensus       206 ~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD  282 (478)
T ss_dssp             CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred             CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence            568999999654322110                      1349999999999999998864   799999999999875


Q ss_pred             hhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc---------------cCCCCCHHHHHHHHHHHhcCC--CCcccc
Q 040531          205 MLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL---------------KGVTLKARDIAEAALYLASDE--SKYISG  267 (285)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~eeva~~~~~l~s~~--~~~~~G  267 (285)
                      ........         ........+.........|               ...++.++|+|++++.++...  ...-.|
T Consensus       283 ~~~~g~~~---------~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~  353 (478)
T 4dqv_A          283 TSYAGQLN---------MSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGF  353 (478)
T ss_dssp             SSSSSCCC---------TTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSE
T ss_pred             CccCCcCC---------HHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCC
Confidence            32110000         0011112222222211111               112477899999999987541  122367


Q ss_pred             cEEEecCCcc
Q 040531          268 HNLVVDGGFT  277 (285)
Q Consensus       268 ~~i~vdgG~~  277 (285)
                      +++++-++..
T Consensus       354 ~~ynv~~~~~  363 (478)
T 4dqv_A          354 ATYHVMNPHD  363 (478)
T ss_dssp             EEEEESCCCC
T ss_pred             ceEEecCCCC
Confidence            8898877654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=9.1e-20  Score=158.35  Aligned_cols=221  Identities=15%  Similarity=0.127  Sum_probs=151.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++|||||+|+||++++++|+++| +.|++++|+.....  ...+.    .+. +.+|+++.+.++.+++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cce-eccccccHHHHHHHHhccc--cCCCcE
Confidence            38999999999999999999999 99999998765421  01111    122 6789998888777654100  236999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-----------C
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-----------G  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-----------~  164 (285)
                      |||+||....          ..+++.+.+++|+.++..+++++.+.    +. ++|++||...+...+           +
T Consensus        72 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p  136 (310)
T 1eq2_A           72 IFHEGACSST----------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKP  136 (310)
T ss_dssp             EEECCSCCCT----------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCC
T ss_pred             EEECcccccC----------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCC
Confidence            9999997421          22346788999999999999998663    34 899999976543221           2


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh-------
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL-------  237 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  237 (285)
                      ...|+.+|.+.+.+++.++.+   ++++++.++||.+.++........          .......+.....+.       
T Consensus       137 ~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  203 (310)
T 1eq2_A          137 LNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSM----------ASVAFHLNTQLNNGESPKLFEG  203 (310)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGG----------SCHHHHHHHHHHC---------
T ss_pred             CChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCcc----------chHHHHHHHHHHcCCCcEEecC
Confidence            467999999999999998875   479999999999988754311000          000001111111100       


Q ss_pred             hcc-cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          238 ANL-KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       238 ~~~-~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ... ...++.++|+|++++.++....    |+.+++.+|...
T Consensus       204 g~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          204 SENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             ----CBCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             CCcceEccEEHHHHHHHHHHHHhcCC----CCeEEEeCCCcc
Confidence            011 2235779999999999986643    789999887654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.82  E-value=1e-19  Score=155.34  Aligned_cols=192  Identities=18%  Similarity=0.136  Sum_probs=139.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|+||++++++|+ +|++|++++|+.+. .          ..   +.+|++|.+++.++++.+     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~~---~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------GG---YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------TC---EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------CC---ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999 58999999998742 1          11   889999999999888754     69999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC----------CCc
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL----------GPH  166 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~----------~~~  166 (285)
                      |||||....        +.+.+++++.+++|+.++..+++++.+    . ++++|++||.....+.+          +..
T Consensus        62 i~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~  128 (273)
T 2ggs_A           62 INAAAMTDV--------DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPIN  128 (273)
T ss_dssp             EECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSS
T ss_pred             EECCcccCh--------hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCC
Confidence            999997421        123467889999999999999999865    2 25999999987764432          256


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccc--hhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc----c
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVAT--SMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN----L  240 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  240 (285)
                      .|+.+|++++.+++.    +     ....+.|+.+..  ++...                    ...........    .
T Consensus       129 ~Y~~sK~~~e~~~~~----~-----~~~~iR~~~v~G~~~~~~~--------------------~~~~~~~~~~~~~~~~  179 (273)
T 2ggs_A          129 YYGLSKLLGETFALQ----D-----DSLIIRTSGIFRNKGFPIY--------------------VYKTLKEGKTVFAFKG  179 (273)
T ss_dssp             HHHHHHHHHHHHHCC----T-----TCEEEEECCCBSSSSHHHH--------------------HHHHHHTTCCEEEESC
T ss_pred             HHHHHHHHHHHHHhC----C-----CeEEEeccccccccHHHHH--------------------HHHHHHcCCCEEeecC
Confidence            899999999999987    2     234556665552  22111                    11111111000    0


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ....+.++|+|+++++++++..   +| .++++|
T Consensus       180 ~~~~~~~~dva~~i~~~~~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          180 YYSPISARKLASAILELLELRK---TG-IIHVAG  209 (273)
T ss_dssp             EECCCBHHHHHHHHHHHHHHTC---CE-EEECCC
T ss_pred             CCCceEHHHHHHHHHHHHhcCc---CC-eEEECC
Confidence            3457899999999999997642   45 788887

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.82  E-value=8.2e-19  Score=150.83  Aligned_cols=200  Identities=14%  Similarity=0.042  Sum_probs=146.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      |++|||||+|+||++++++|+++  |++|++++|+.+....+..      .++.++.+|++|.+++.++++       .+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD------QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH------TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh------cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            46999999999999999999998  9999999998776554322      357889999999988877754       58


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      |+|||+|+..       .    . +      ++|+.++..+++++..    .+.+++|++||.... .  ....|+.+|.
T Consensus        68 d~vi~~a~~~-------~----~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-~--~~~~y~~~K~  122 (287)
T 2jl1_A           68 SKLLFISGPH-------Y----D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAE-E--SIIPLAHVHL  122 (287)
T ss_dssp             SEEEECCCCC-------S----C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGG-G--CCSTHHHHHH
T ss_pred             CEEEEcCCCC-------c----C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-C--CCCchHHHHH
Confidence            9999999852       0    1 1      5788888888888754    345789999998664 2  2347999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh--hcccCCCCCHHHHH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL--ANLKGVTLKARDIA  251 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eeva  251 (285)
                      +.+.+++.       .+++++.++||.+.++.......                .....-....  ......++.++|+|
T Consensus       123 ~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~Dva  179 (287)
T 2jl1_A          123 ATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLR----------------ASTESGAIVTNAGSGIVNSVTRNELA  179 (287)
T ss_dssp             HHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGH----------------HHHHHTEEEESCTTCCBCCBCHHHHH
T ss_pred             HHHHHHHH-------cCCCeEEEECCEeccccchhhHH----------------HHhhCCceeccCCCCccCccCHHHHH
Confidence            99998863       57999999999987765211110                0110000000  01123467999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++.++....  ..|+.+++.||...
T Consensus       180 ~~~~~~~~~~~--~~g~~~~i~~~~~~  204 (287)
T 2jl1_A          180 LAAATVLTEEG--HENKTYNLVSNQPW  204 (287)
T ss_dssp             HHHHHHHTSSS--CTTEEEEECCSSCB
T ss_pred             HHHHHHhcCCC--CCCcEEEecCCCcC
Confidence            99999997643  47999999998554

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.81  E-value=7.9e-20  Score=158.12  Aligned_cols=203  Identities=13%  Similarity=0.005  Sum_probs=145.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      ++|||||+|+||++++++|+ +|++|++++|+..                 ++.+|++|.+++.++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999 8999999998761                 3578999999988887643     69999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-----------CC
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-----------GP  165 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-----------~~  165 (285)
                      ||+||.....        ...+++.+.+++|+.++..+++++.+    .+ .++|++||...+.+.+           +.
T Consensus        59 ih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~  125 (299)
T 1n2s_A           59 VNAAAHTAVD--------KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPL  125 (299)
T ss_dssp             EECCCCCCHH--------HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred             EECcccCCHh--------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCc
Confidence            9999964210        12234677899999999999998743    23 4899999976543221           24


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc-----c
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN-----L  240 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  240 (285)
                      ..|+.+|.+.+.+++.++.       +++.++|+.+.++......                ...+.....+...     .
T Consensus       126 ~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~----------------~~~~~~~~~~~~~~~~~~~  182 (299)
T 1n2s_A          126 NVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA----------------KTMLRLAKERQTLSVINDQ  182 (299)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH----------------HHHHHHHHHCSEEEEECSC
T ss_pred             cHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH----------------HHHHHHHhcCCCEEeecCc
Confidence            6899999999999987642       7889999999887532111                1111111111100     1


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcc-cccEEEecCCccc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYI-SGHNLVVDGGFTT  278 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~-~G~~i~vdgG~~~  278 (285)
                      ....+.++|+|+++++++....... .|+.+++.+|...
T Consensus       183 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          183 YGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             EECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred             ccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCC
Confidence            1234568999999999986542223 5889999887644

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.81  E-value=6e-19  Score=153.79  Aligned_cols=217  Identities=17%  Similarity=0.161  Sum_probs=150.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           17 IAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++|||||+|+||++++++|+++  |++|++++|+.....           ++.++.+|++|.+++.+++++     ..+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YSID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TTCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cCCc
Confidence            3899999999999999999998  899999998765421           357889999999998888764     2699


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------------  162 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------------  162 (285)
                      +|||+|+....         ...++++..+++|+.++..+++++.+    .+.+++|++||.....+.            
T Consensus        65 ~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~  131 (317)
T 3ajr_A           65 AIFHLAGILSA---------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITIT  131 (317)
T ss_dssp             EEEECCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCC
T ss_pred             EEEECCcccCC---------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccC
Confidence            99999986421         12345778899999999999998865    345799999998765432            


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh--cc
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA--NL  240 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  240 (285)
                      .+...|+.+|++.+.+++.++.+.   +++++.+.|+.+..+......          .........+........  ..
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  198 (317)
T 3ajr_A          132 RPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTA----------GTTDYAVEIFYYAVKREKYKCY  198 (317)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCS----------CSSTHHHHHHHHHHTTCCEEEC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCC----------cchhHHHHHHHHHHhCCCceee
Confidence            135689999999999999988763   799999987665543211000          000001111111111100  00


Q ss_pred             -----cCCCCCHHHHHHHHHHHhcCCC-CcccccEEEecCC
Q 040531          241 -----KGVTLKARDIAEAALYLASDES-KYISGHNLVVDGG  275 (285)
Q Consensus       241 -----~~~~~~~eeva~~~~~l~s~~~-~~~~G~~i~vdgG  275 (285)
                           ...++.++|+|++++.++.... .+.+|+.+++.|+
T Consensus       199 ~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          199 LAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             SCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             cCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence                 0113568999999988875443 3346788998764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.81  E-value=1.8e-19  Score=154.98  Aligned_cols=197  Identities=15%  Similarity=0.027  Sum_probs=144.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++|||||+|+||++++++|+++|++|++++|                     .++|++|.+++.++++..     ++|+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------------------~~~D~~d~~~~~~~~~~~-----~~d~   59 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDK---------------------KLLDITNISQVQQVVQEI-----RPHI   59 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECT---------------------TTSCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecc---------------------cccCCCCHHHHHHHHHhc-----CCCE
Confidence            38999999999999999999999999999998                     238999999998887754     6999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~  164 (285)
                      |||+||....        +...+++.+.+++|+.++..+++++.+.     +.++|++||...+.+.           .+
T Consensus        60 vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p  126 (287)
T 3sc6_A           60 IIHCAAYTKV--------DQAEKERDLAYVINAIGARNVAVASQLV-----GAKLVYISTDYVFQGDRPEGYDEFHNPAP  126 (287)
T ss_dssp             EEECCCCCCH--------HHHTTCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCCCCSSCBCTTSCCCC
T ss_pred             EEECCcccCh--------HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchhhhcCCCCCCCCCCCCCCCC
Confidence            9999997532        1122457889999999999999998653     2379999997654221           23


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh-----c
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA-----N  239 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  239 (285)
                      ...|+.+|.+.+.+++.++.       ++..++|+.+.+|.......                ...........     .
T Consensus       127 ~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~----------------~~~~~~~~~~~~~~~~~  183 (287)
T 3sc6_A          127 INIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVK----------------TMIRLGKEREEISVVAD  183 (287)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH----------------HHHHHHTTCSEEEEECS
T ss_pred             CCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHH----------------HHHHHHHcCCCeEeecC
Confidence            56899999999999987644       45789999998764322111                11111111100     0


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ....++.++|+|+++++++....    ++.+++.+|...
T Consensus       184 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          184 QIGSPTYVADLNVMINKLIHTSL----YGTYHVSNTGSC  218 (287)
T ss_dssp             CEECCEEHHHHHHHHHHHHTSCC----CEEEECCCBSCE
T ss_pred             cccCceEHHHHHHHHHHHHhCCC----CCeEEEcCCCcc
Confidence            11235679999999999997754    668888887644

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=5.9e-19  Score=169.97  Aligned_cols=179  Identities=16%  Similarity=0.150  Sum_probs=132.0

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +++++++|++|||||+|+||++++++|+++|++|++++|+........+.+.. ...++.++.+|+++.+++.++++.. 
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence            55678999999999999999999999999999999999876543222222211 1346788999999999988877642 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC------
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG------  161 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~------  161 (285)
                          ++|+|||+||....    .    ...+...+.+++|+.++..+++++..    .+.++||++||.+....      
T Consensus        84 ----~~D~Vih~A~~~~~----~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~  147 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAV----G----ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPN  147 (699)
T ss_dssp             ----CCCEEEECCSCCCH----H----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTT
T ss_pred             ----CCCEEEECCcccCc----C----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccc
Confidence                69999999997421    0    01233456899999999999887654    34578999999765321      


Q ss_pred             ---------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          162 ---------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       162 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                               ..+...|+.+|++++.+++.++.+. ..++++..++|+.+..+.
T Consensus       148 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          148 MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCC
Confidence                     1134689999999999999998875 357999999998887653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.80  E-value=7.3e-20  Score=159.62  Aligned_cols=217  Identities=13%  Similarity=0.082  Sum_probs=145.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++.++++|||||+|+||++++++|+++|++|++++|+........+.+..  ...++.++.+|++              
T Consensus         3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            3 RNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--------------   68 (321)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--------------
T ss_pred             cccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--------------
Confidence            456789999999999999999999999999999999977621000011111  1234566666765              


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------  162 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------  162 (285)
                         .+|+|||+|+.....    .    ..++....++ |+.++..+++++...    +..++|++||...+...      
T Consensus        69 ---~~d~vi~~a~~~~~~----~----~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~  132 (321)
T 3vps_A           69 ---DVRLVYHLASHKSVP----R----SFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTP  132 (321)
T ss_dssp             ---TEEEEEECCCCCCHH----H----HTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             ---cCCEEEECCccCChH----H----HHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCC
Confidence               699999999975321    0    0111223456 999999999988654    34689999997654321      


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHhCCCCc-EEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          163 -----LGPHAYTVSKHAIVGLTKNTACELGKYGI-RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       163 -----~~~~~Y~asKaa~~~l~~~la~e~~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                           .+...|+.+|.+.+.+++.++.+   +++ ++..++|+.+.+|.....              ......+......
T Consensus       133 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~--------------~~~~~~~~~~~~~  195 (321)
T 3vps_A          133 EDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPD--------------ALVPRLCANLLTR  195 (321)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTT--------------SHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCC--------------ChHHHHHHHHHcC
Confidence                 13568999999999999999875   578 999999999988753320              0111122222222


Q ss_pred             hhc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          237 LAN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       237 ~~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ...       ....++.++|+|+++++++.....   | .+++.+|...
T Consensus       196 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          196 NELPVEGDGEQRRDFTYITDVVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             SEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             CCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence            110       111246899999999999977643   7 9999988654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=1e-18  Score=150.05  Aligned_cols=196  Identities=16%  Similarity=0.084  Sum_probs=138.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           17 IAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++|||||+|+||++++++|+++  |++|++++|+.+....+..      ..+.++.+|++|.+++.++++       .+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            3799999999999999999998  9999999998776554322      257889999999988877654       589


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +|||+|+..       +             +.|+.+...+++++..    .+.+++|++||....   +....|+.+|.+
T Consensus        68 ~vi~~a~~~-------~-------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~---~~~~~y~~sK~~  120 (286)
T 2zcu_A           68 KLLLISSSE-------V-------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD---TSPLGLADEHIE  120 (286)
T ss_dssp             EEEECC----------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT---TCCSTTHHHHHH
T ss_pred             EEEEeCCCC-------c-------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC---CCcchhHHHHHH
Confidence            999999842       0             0266677666666644    345789999998764   233579999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh--hcccCCCCCHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL--ANLKGVTLKARDIAE  252 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eeva~  252 (285)
                      .+.+++.       .+++++.++||.+.++..... .                .....-....  ......++.++|+|+
T Consensus       121 ~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~i~~~Dva~  176 (286)
T 2zcu_A          121 TEKMLAD-------SGIVYTLLRNGWYSENYLASA-P----------------AALEHGVFIGAAGDGKIASATRADYAA  176 (286)
T ss_dssp             HHHHHHH-------HCSEEEEEEECCBHHHHHTTH-H----------------HHHHHTEEEESCTTCCBCCBCHHHHHH
T ss_pred             HHHHHHH-------cCCCeEEEeChHHhhhhHHHh-H----------------HhhcCCceeccCCCCccccccHHHHHH
Confidence            9999864       479999999998877653111 0                0000000000  012234679999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++++.+..  .+|+.+++.||...
T Consensus       177 ~~~~~~~~~~--~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          177 AAARVISEAG--HEGKVYELAGDSAW  200 (286)
T ss_dssp             HHHHHHHSSS--CTTCEEEECCSSCB
T ss_pred             HHHHHhcCCC--CCCceEEEeCCCcC
Confidence            9999997643  48999999998544

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.79  E-value=2.8e-20  Score=160.17  Aligned_cols=206  Identities=12%  Similarity=0.031  Sum_probs=146.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++++|||| +|+||++++++|+++|++|++++|+.+.+          ..++.++.+|++|.+++.++++      +++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~   64 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRP   64 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCC
Confidence            467899999 59999999999999999999999987652          3568899999999988877654      369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------  162 (285)
                      |+|||+|+..             ..+....+++|+.++..+++++.    +.+.+++|++||...+...           
T Consensus        65 d~vih~a~~~-------------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  127 (286)
T 3gpi_A           65 EILVYCVAAS-------------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPP  127 (286)
T ss_dssp             SEEEECHHHH-------------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCC
T ss_pred             CEEEEeCCCC-------------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCC
Confidence            9999999852             13346678999999988888764    3456799999997653221           


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      .+...|+.+|.+.+.+ +..        +++..++|+.+.++..........                ............
T Consensus       128 ~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~----------------~~~~~~~~~~~~  182 (286)
T 3gpi_A          128 IAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQ----------------TPEQWPARNAWT  182 (286)
T ss_dssp             CCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTT----------------CGGGSCSSBCEE
T ss_pred             CCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHH----------------hcccCCCcCcee
Confidence            1356899999999988 542        788999999998876432211100                000000011223


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .++.++|+|+++++++........|+.+++.+|...
T Consensus       183 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          183 NRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCE
T ss_pred             EEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCC
Confidence            357899999999999976433457899999887644

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.79  E-value=5.3e-19  Score=164.25  Aligned_cols=226  Identities=12%  Similarity=0.020  Sum_probs=156.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh---HHHHHHhh---------cCCCceEEEeccCCCHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG---IALADSLL---------SSSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~---~~~~~~~~---------~~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      .+++|||||+|+||++++++|.+.|++|++++|+....   ..+.+.+.         ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47999999999999999999999999999999987732   22222221         12467999999999977766  


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc--cc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS--LM  160 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~--~~  160 (285)
                            ....+|+|||+|+....           ...+...+++|+.++..+++++.+     +..++|++||...  ..
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~  285 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-----------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYF  285 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEE
T ss_pred             ------CccCCCEEEECCceecC-----------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCC
Confidence                  34589999999997521           234567789999999999998865     3578999999766  10


Q ss_pred             C----------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCch
Q 040531          161 G----------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCE  224 (285)
Q Consensus       161 ~----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  224 (285)
                      .                ......|+.+|.+.+.+++.++.    .|++++.++||.|.++.....+..       .....
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~-------~~~~~  354 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMR-------NIKTN  354 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCT-------TCTTC
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccC-------CcchH
Confidence            0                11456899999999999998754    589999999999988754322100       00001


Q ss_pred             HHHHHHHHHHhhhhcc------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          225 EEEEKMEELVRGLANL------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       225 ~~~~~~~~~~~~~~~~------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .....+.........+      ...++.++|+|+++++++....   .|+++++.+|...
T Consensus       355 ~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          355 RFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             HHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             HHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            1112222222211111      1125678999999999997654   7899999888654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.79  E-value=6.7e-19  Score=152.95  Aligned_cols=220  Identities=13%  Similarity=0.083  Sum_probs=149.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+++++|||||+|+||++++++|+++|+      +...           ....+.++.+|++|.+++.++++..     
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~-----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEKV-----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHHS-----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhhc-----
Confidence            46789999999999999999999999997      1000           0122444589999999998887642     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC----------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG----------  161 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~----------  161 (285)
                      ++|+|||+|+....       ...+.++..+.+++|+.++..+++++..    .+..++|++||...+..          
T Consensus        61 ~~d~Vih~A~~~~~-------~~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~  129 (319)
T 4b8w_A           61 QPTHVIHLAAMVGG-------LFRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETM  129 (319)
T ss_dssp             CCSEEEECCCCCCC-------HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGG
T ss_pred             CCCEEEECceeccc-------ccccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccc
Confidence            69999999997421       0112234567899999999999998755    34568999999865321          


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHH---
Q 040531          162 ------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEE---  232 (285)
Q Consensus       162 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  232 (285)
                            .|....|+.+|.+.+.+++.++.+.   ++++..++|+.+.+|........          .......+..   
T Consensus       130 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~----------~~~~~~~~~~~~~  196 (319)
T 4b8w_A          130 IHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIED----------GHVLPGLIHKVHL  196 (319)
T ss_dssp             GGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTT----------SCHHHHHHHHHHH
T ss_pred             cccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCcc----------ccccHHHHHHHHH
Confidence                  1112259999999999999998874   69999999999988754211000          0011111122   


Q ss_pred             -HHhhhhcc-------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          233 -LVRGLANL-------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       233 -~~~~~~~~-------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                       ...+....       ...++.++|+|++++.++..... ..|+.+++.+|...
T Consensus       197 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          197 AKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEV  249 (319)
T ss_dssp             HHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCE
T ss_pred             HhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCce
Confidence             12211111       11246899999999999865322 46778888776544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.76  E-value=8.1e-18  Score=149.25  Aligned_cols=215  Identities=16%  Similarity=0.070  Sum_probs=140.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEecc-CCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD-VSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-~s~~~~i~~~~~~i~~~~~   91 (285)
                      +++++++||||+|+||++++++|+++|++|++++|+.+...  .+.+.+ ..++.++.+| ++|.+++.++++       
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------
Confidence            45788999999999999999999999999999999877642  122221 2468889999 999999887764       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccc-cccCCCCCccch
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVA-SLMGGLGPHAYT  169 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~-~~~~~~~~~~Y~  169 (285)
                      .+|+||||++...          .         +.|..+ ..+++++    ++.+ .++||++||.. +..+.+....|.
T Consensus        73 ~~d~Vi~~a~~~~----------~---------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~  128 (352)
T 1xgk_A           73 GAHLAFINTTSQA----------G---------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMW  128 (352)
T ss_dssp             TCSEEEECCCSTT----------S---------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             cCCEEEEcCCCCC----------c---------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHH
Confidence            5899999987431          0         124444 4444444    3334 57999999976 344445557899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccc-cCCCCCchHHHHHHHHHHhhhhcccCCCCCH-
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDC-MDSGKPCEEEEEKMEELVRGLANLKGVTLKA-  247 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  247 (285)
                      .+|++.+.+++.+       ++++++++||++.+............. .........       .... .......+.+ 
T Consensus       129 ~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~-------~~~~-~~~~~~~i~v~  193 (352)
T 1xgk_A          129 APKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH-------APFD-PDIPLPWLDAE  193 (352)
T ss_dssp             HHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEE-------ESSC-TTSCEEEECHH
T ss_pred             HHHHHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEe-------eccC-CCCceeeEecH
Confidence            9999999998762       799999999976554332110000000 000000000       0000 0001124677 


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      +|+|+++..++.+......|+.+++.++.
T Consensus       194 ~Dva~ai~~~l~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          194 HDVGPALLQIFKDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHHHHHHHHHHHHCHHHHTTCEEEECSEE
T ss_pred             HHHHHHHHHHHhCCchhhCCeEEEEecCC
Confidence            89999999998654334578999988654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.75  E-value=1.6e-17  Score=142.94  Aligned_cols=196  Identities=12%  Similarity=0.062  Sum_probs=132.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++|||||+|+||++++++|++. |++|++++|+.+....+      ...++.++.+|++|.+++.++++       .+|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            5999999999999999999998 99999999998764322      13468999999999998887764       6999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAI  175 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~  175 (285)
                      |||+||....                  ...|+.+...+++++    ++.+.++||++||.+.....    .|..++...
T Consensus        69 vi~~a~~~~~------------------~~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~~----~~~~~~~~~  122 (289)
T 3e48_A           69 VVFIPSIIHP------------------SFKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHNN----PFHMSPYFG  122 (289)
T ss_dssp             EEECCCCCCS------------------HHHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTTC----CSTTHHHHH
T ss_pred             EEEeCCCCcc------------------chhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCCC----CCccchhHH
Confidence            9999986421                  012455554555544    44556799999997543322    233333221


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC----CCCHHHHH
Q 040531          176 VGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV----TLKARDIA  251 (285)
Q Consensus       176 ~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~eeva  251 (285)
                           .+...+...+++++.++||.+.+++.... .                .....  .....+.+.    ++.++|+|
T Consensus       123 -----~~e~~~~~~g~~~~ilrp~~~~~~~~~~~-~----------------~~~~~--~~~~~~~g~~~~~~i~~~Dva  178 (289)
T 3e48_A          123 -----YASRLLSTSGIDYTYVRMAMYMDPLKPYL-P----------------ELMNM--HKLIYPAGDGRINYITRNDIA  178 (289)
T ss_dssp             -----HHHHHHHHHCCEEEEEEECEESTTHHHHH-H----------------HHHHH--TEECCCCTTCEEEEECHHHHH
T ss_pred             -----HHHHHHHHcCCCEEEEeccccccccHHHH-H----------------HHHHC--CCEecCCCCceeeeEEHHHHH
Confidence                 12222334589999999999998764311 0                00000  001112222    57899999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++++++.+...+  |+.+++. |...
T Consensus       179 ~~~~~~l~~~~~~--g~~~~~~-~~~~  202 (289)
T 3e48_A          179 RGVIAIIKNPDTW--GKRYLLS-GYSY  202 (289)
T ss_dssp             HHHHHHHHCGGGT--TCEEEEC-CEEE
T ss_pred             HHHHHHHcCCCcC--CceEEeC-CCcC
Confidence            9999999776543  9999998 6554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.75  E-value=1.6e-17  Score=143.75  Aligned_cols=211  Identities=14%  Similarity=0.082  Sum_probs=139.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||||+|+||++++++|+++| ++|++++|+.+....  +.+.  ...+.++.+|++|.+++.++++       .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~--~~~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELR--LQGAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHH--HTTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHH--HCCCEEEEecCCCHHHHHHHHh-------cC
Confidence            5799999999999999999999999 999999998765421  1221  1357889999999999887765       59


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc--CCCCCccchhh
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM--GGLGPHAYTVS  171 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~--~~~~~~~Y~as  171 (285)
                      |+|||+++....         .       ..+.|+.+...+++++    ++.+.++||++|+.+...  ..+....|..+
T Consensus        74 d~vi~~a~~~~~---------~-------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~s  133 (299)
T 2wm3_A           74 YATFIVTNYWES---------C-------SQEQEVKQGKLLADLA----RRLGLHYVVYSGLENIKKLTAGRLAAAHFDG  133 (299)
T ss_dssp             SEEEECCCHHHH---------T-------CHHHHHHHHHHHHHHH----HHHTCSEEEECCCCCHHHHTTTSCCCHHHHH
T ss_pred             CEEEEeCCCCcc---------c-------cchHHHHHHHHHHHHH----HHcCCCEEEEEcCccccccCCCcccCchhhH
Confidence            999999985311         0       1234455555555544    444567899966644322  11224679999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |.+++.+++.       .|++++.++||.+.+++.....+...   ...... ..       ..........++.++|+|
T Consensus       134 K~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~---~~g~~~-~~-------~~~~~~~~~~~i~~~Dva  195 (299)
T 2wm3_A          134 KGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKA---PDGKSY-LL-------SLPTGDVPMDGMSVSDLG  195 (299)
T ss_dssp             HHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEEC---TTSSSE-EE-------CCCCTTSCEEEECGGGHH
T ss_pred             HHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCccc---CCCCEE-EE-------EecCCCCccceecHHHHH
Confidence            9999998875       37999999999999986542221100   000000 00       000000111246899999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCC
Q 040531          252 EAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +++..++.+... ..|+.+++.|.
T Consensus       196 ~~~~~~l~~~~~-~~g~~~~~~g~  218 (299)
T 2wm3_A          196 PVVLSLLKMPEK-YVGQNIGLSTC  218 (299)
T ss_dssp             HHHHHHHHSHHH-HTTCEEECCSE
T ss_pred             HHHHHHHcChhh-hCCeEEEeeec
Confidence            999999865422 37889998763

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.71  E-value=4.3e-17  Score=145.26  Aligned_cols=195  Identities=13%  Similarity=0.041  Sum_probs=139.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +++|||||+|+||++++++|+++|+ +|+.++|+                         +|.+++.++++       .+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCC
Confidence            3699999999999999999999998 77766654                         67788887766       499


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-ceEEEEcccccccCCCCCccchhhHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKH  173 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~ii~vss~~~~~~~~~~~~Y~asKa  173 (285)
                      +|||+||.....            +....+++|+.++..+++++.    +.+. .++|++||.....    ...|+.+|.
T Consensus        49 ~Vih~a~~~~~~------------~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~  108 (369)
T 3st7_A           49 FIVHLAGVNRPE------------HDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKL  108 (369)
T ss_dssp             EEEECCCSBCTT------------CSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHH
T ss_pred             EEEECCcCCCCC------------CHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHH
Confidence            999999975321            223457889999999888873    3333 3899999987643    568999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc------CCCCCH
Q 040531          174 AIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK------GVTLKA  247 (285)
Q Consensus       174 a~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  247 (285)
                      +.+.+++.++++.   ++++..++|+.+.++.....+.            ..................      ..++.+
T Consensus       109 ~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  173 (369)
T 3st7_A          109 QGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYN------------SVIATFCYKIARNEEIQVNDRNVELTLNYV  173 (369)
T ss_dssp             HHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSS------------CHHHHHHHHHHTTCCCCCSCTTCEEEEEEH
T ss_pred             HHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcc------------hHHHHHHHHHHcCCCeEecCCCeEEEEEEH
Confidence            9999999998874   6889999999998875432110            011111122222111111      124668


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|+|++++.++..... ..|+.+++.+|...
T Consensus       174 ~Dva~~~~~~l~~~~~-~~~~~~~i~~~~~~  203 (369)
T 3st7_A          174 DDIVAEIKRAIEGTPT-IENGVPTVPNVFKV  203 (369)
T ss_dssp             HHHHHHHHHHHHTCCC-EETTEECCSCCEEE
T ss_pred             HHHHHHHHHHHhCCcc-cCCceEEeCCCCce
Confidence            9999999999976542 24889999887544

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.69  E-value=4.3e-16  Score=133.76  Aligned_cols=198  Identities=9%  Similarity=-0.080  Sum_probs=134.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++||||| |.||++++++|+++|++|++++|+.+....+..      ..+.++.+|++|.+            ...+|+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence            68999998 999999999999999999999999877654432      35889999999822            457999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~  164 (285)
                      |||+|+.....         .  ..          ...+++++...  ..+..++|++||...+...           .+
T Consensus        67 vi~~a~~~~~~---------~--~~----------~~~l~~a~~~~--~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p  123 (286)
T 3ius_A           67 LLISTAPDSGG---------D--PV----------LAALGDQIAAR--AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP  123 (286)
T ss_dssp             EEECCCCBTTB---------C--HH----------HHHHHHHHHHT--GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC
T ss_pred             EEECCCccccc---------c--HH----------HHHHHHHHHhh--cCCceEEEEeecceecCCCCCCCcCCCCCCCC
Confidence            99999865321         1  01          11223332221  1345789999997543221           12


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|+.+|.+.+.+++.+      .++++..++|+.+.++..... ..   ... ......        ..  ......+
T Consensus       124 ~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~-~~---~~~-~~~~~~--------~~--~~~~~~~  182 (286)
T 3ius_A          124 TAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPF-SK---LGK-GGIRRI--------IK--PGQVFSR  182 (286)
T ss_dssp             CSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSS-TT---SSS-SCCCEE--------EC--TTCCBCE
T ss_pred             CCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHH-HH---Hhc-CCcccc--------CC--CCcccce
Confidence            357999999999999876      579999999999988753221 10   000 000000        00  0011234


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +.++|+|++++.++....   .|+.+++.+|...+
T Consensus       183 i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s  214 (286)
T 3ius_A          183 IHVEDIAQVLAASMARPD---PGAVYNVCDDEPVP  214 (286)
T ss_dssp             EEHHHHHHHHHHHHHSCC---TTCEEEECCSCCBC
T ss_pred             EEHHHHHHHHHHHHhCCC---CCCEEEEeCCCCcc
Confidence            678999999999997754   78899998886543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.69  E-value=4.5e-16  Score=134.90  Aligned_cols=202  Identities=15%  Similarity=0.146  Sum_probs=129.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-------hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-------AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-------~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +++++||||+|+||++++++|+++|++|++++|+.       +..+.+ +.+.  ...+.++++|++|.+++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~--~~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ--SLGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH--HTTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH--hCCCEEEEeCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999986       443332 2222  2357889999999998887765   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEccccccc-----C
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLM-----G  161 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~-----~  161 (285)
                          .+|+|||++|...                       +.+...+++++..    .+ ..++|. |+.+...     .
T Consensus        76 ----~~d~vi~~a~~~~-----------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~  123 (307)
T 2gas_A           76 ----QVDIVICAAGRLL-----------------------IEDQVKIIKAIKE----AGNVKKFFP-SEFGLDVDRHDAV  123 (307)
T ss_dssp             ----TCSEEEECSSSSC-----------------------GGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTSCCCC
T ss_pred             ----CCCEEEECCcccc-----------------------cccHHHHHHHHHh----cCCceEEee-cccccCcccccCC
Confidence                5999999998631                       2344445555432    33 457763 4333211     1


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhccc
Q 040531          162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK  241 (285)
Q Consensus       162 ~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      .|....| .+|++++.+++.       .+++++.++||++.+++.......... .   .....    + ... .-....
T Consensus       124 ~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~-~---~~~~~----~-~~~-~~~~~~  185 (307)
T 2gas_A          124 EPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDAT-D---PPRDK----V-VIL-GDGNVK  185 (307)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCS-S---CCSSE----E-EEE-TTSCSE
T ss_pred             CcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccc-c---CCCCe----E-EEe-cCCCcc
Confidence            2224578 999999988763       368999999999988764332110000 0   00000    0 000 000111


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ..++.++|+|+++..++.+..  ..|+.+.+.|
T Consensus       186 ~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          186 GAYVTEADVGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             EEEECHHHHHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             eEEeeHHHHHHHHHHHHcCcc--ccCceEEEeC
Confidence            235789999999999997643  2477777764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.66  E-value=4.5e-15  Score=131.54  Aligned_cols=217  Identities=13%  Similarity=0.020  Sum_probs=142.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC-----CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHG-----AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....       ....++.++.+|++|.+++.++++.    
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~----   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSP----   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTT----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhc----
Confidence            5789999999999999999999999     99999999876532       1235688999999999988776642    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEE-------EEcccccccCC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCII-------STASVASLMGG  162 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii-------~vss~~~~~~~  162 (285)
                      .+.+|+|||+||...             ++..+.+++|+.++..+++++.+..  .+..++|       ++||...+...
T Consensus        70 ~~~~d~vih~a~~~~-------------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~  134 (364)
T 2v6g_A           70 LTDVTHVFYVTWANR-------------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKI  134 (364)
T ss_dssp             CTTCCEEEECCCCCC-------------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTS
T ss_pred             CCCCCEEEECCCCCc-------------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhcccc
Confidence            224999999998641             1356789999999999999886542  1344666       67776432110


Q ss_pred             --------------CCCccchhhHHHHHHHHHHHHHHhCCCC-cEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          163 --------------LGPHAYTVSKHAIVGLTKNTACELGKYG-IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       163 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~~-i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                    +....|    .+.+.+++.++.   .++ +++..++|+.+..+.......            ....
T Consensus       135 ~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~------------~~~~  195 (364)
T 2v6g_A          135 ESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMN------------LVGT  195 (364)
T ss_dssp             CCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSC------------HHHH
T ss_pred             ccCCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccc------------hHHH
Confidence                          112345    334555554443   355 999999999998865431100            0000


Q ss_pred             H-HHHHHH--hhhh-c---------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          228 E-KMEELV--RGLA-N---------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       228 ~-~~~~~~--~~~~-~---------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      . .+....  .+.. .         .......++|+|++++.++....  ..|+.+++.+|...
T Consensus       196 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          196 LCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDVF  257 (364)
T ss_dssp             HHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCCB
T ss_pred             HHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCcC
Confidence            1 111110  1110 0         01123455889999999886532  37889999887543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.66  E-value=3.2e-15  Score=131.96  Aligned_cols=207  Identities=12%  Similarity=0.057  Sum_probs=134.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc----hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD----AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~----~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |..+++|||||+|+||++++++|++.|++|++++|+.    +..+. .+.+.  ..++.++.+|++|.+++.+++++.  
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~--   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE--DKGAIIVYGLINEQEAMEKILKEH--   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH--HTTCEEEECCTTCHHHHHHHHHHT--
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH--hCCcEEEEeecCCHHHHHHHHhhC--
Confidence            5577899999999999999999999999999999987    22221 12222  346889999999999988887642  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc----CCCC
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM----GGLG  164 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~----~~~~  164 (285)
                         .+|+|||+++.                       .|+.+...+++++...-   ...++|+ |+.+...    +.++
T Consensus        83 ---~~d~Vi~~a~~-----------------------~n~~~~~~l~~aa~~~g---~v~~~v~-S~~g~~~~e~~~~~p  132 (346)
T 3i6i_A           83 ---EIDIVVSTVGG-----------------------ESILDQIALVKAMKAVG---TIKRFLP-SEFGHDVNRADPVEP  132 (346)
T ss_dssp             ---TCCEEEECCCG-----------------------GGGGGHHHHHHHHHHHC---CCSEEEC-SCCSSCTTTCCCCTT
T ss_pred             ---CCCEEEECCch-----------------------hhHHHHHHHHHHHHHcC---CceEEee-cccCCCCCccCcCCC
Confidence               69999999985                       17778888888775531   1445664 4443221    1234


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCC
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT  244 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (285)
                      ...|+.+|.+++.+.+.       .++++..++||.+.+................ ....         ...-......+
T Consensus       133 ~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~-~~~~---------~~g~g~~~~~~  195 (346)
T 3i6i_A          133 GLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPT-DFFQ---------IYGDGNVKAYF  195 (346)
T ss_dssp             HHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCS-SCEE---------EETTSCCCEEE
T ss_pred             cchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCC-ceEE---------EccCCCceEEe
Confidence            56899999999888865       4799999999988775432211100000000 0000         00000111235


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEec
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVD  273 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vd  273 (285)
                      +.++|+|++++.++.+..  ..|+.+.+-
T Consensus       196 i~~~Dva~~~~~~l~~~~--~~~~~~~i~  222 (346)
T 3i6i_A          196 VAGTDIGKFTMKTVDDVR--TLNKSVHFR  222 (346)
T ss_dssp             ECHHHHHHHHHHHTTCGG--GTTEEEECC
T ss_pred             cCHHHHHHHHHHHHhCcc--ccCeEEEEe
Confidence            789999999999997652  246666664

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.65  E-value=3.4e-15  Score=129.72  Aligned_cols=207  Identities=10%  Similarity=0.067  Sum_probs=132.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-----hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-----AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++||||+|+||++++++|+++|++|++++|+..     ..+. .+.+.  ...+.++++|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            367999999999999999999999999999999853     2222 12221  3458889999999998887765     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccC------C
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMG------G  162 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~------~  162 (285)
                        .+|+|||+++....    .               .|+.+...+++++..    .+ ..++|+ |+.+....      .
T Consensus        76 --~~d~vi~~a~~~~~----~---------------~~~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~~  129 (313)
T 1qyd_A           76 --QVDVVISALAGGVL----S---------------HHILEQLKLVEAIKE----AGNIKRFLP-SEFGMDPDIMEHALQ  129 (313)
T ss_dssp             --TCSEEEECCCCSSS----S---------------TTTTTHHHHHHHHHH----SCCCSEEEC-SCCSSCTTSCCCCCS
T ss_pred             --CCCEEEECCccccc----h---------------hhHHHHHHHHHHHHh----cCCCceEEe-cCCcCCccccccCCC
Confidence              59999999986422    0               256666666666543    33 567774 44332111      1


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccC
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG  242 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
                      |....| .+|.+++.+++.       .++++..++||++.++.............   .....    + ..... .....
T Consensus       130 p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~---~~~~~----~-~~~~~-g~~~~  192 (313)
T 1qyd_A          130 PGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMM---PPRDK----V-LIYGD-GNVKG  192 (313)
T ss_dssp             STTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSS---CCSSE----E-CCBTT-SCSEE
T ss_pred             CCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceecccccccccccccccc---CCCCe----E-EEeCC-CCceE
Confidence            334578 999999988753       47888999999987765432211000000   00000    0 00000 00112


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          243 VTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       243 ~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      .++.++|+|+++..++.+..  ..|+.+.+.|
T Consensus       193 ~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          193 IWVDEDDVGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             EEECHHHHHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             EEEEHHHHHHHHHHHHhCcc--cCCceEEEeC
Confidence            35789999999999997643  2467777654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.62  E-value=1.6e-15  Score=132.42  Aligned_cols=203  Identities=12%  Similarity=0.070  Sum_probs=128.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-h----hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-A----AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~----~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ...+..+.+.  ...+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHc-----
Confidence            35799999999999999999999999999999986 2    1112222222  2458889999999999887765     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccC--C---C
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMG--G---L  163 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~--~---~  163 (285)
                        .+|+|||+++...                       +.+...+++++..    .+ ..+|| .|+.+....  .   |
T Consensus        77 --~~d~vi~~a~~~~-----------------------~~~~~~l~~aa~~----~g~v~~~v-~S~~g~~~~~~~~~~p  126 (321)
T 3c1o_A           77 --QVDIVISALPFPM-----------------------ISSQIHIINAIKA----AGNIKRFL-PSDFGCEEDRIKPLPP  126 (321)
T ss_dssp             --TCSEEEECCCGGG-----------------------SGGGHHHHHHHHH----HCCCCEEE-CSCCSSCGGGCCCCHH
T ss_pred             --CCCEEEECCCccc-----------------------hhhHHHHHHHHHH----hCCccEEe-ccccccCccccccCCC
Confidence              5999999998531                       3344455555433    33 45776 333321110  1   1


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ....| .+|++++.+++.       .++++..++||.+.++................ ...        .. .-......
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~-~~~~~~~~  188 (321)
T 3c1o_A          127 FESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRND-DIV--------IY-GTGETKFV  188 (321)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTS-CEE--------EE-TTSCCEEE
T ss_pred             cchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccC-ceE--------Ee-cCCCccee
Confidence            13478 999999988863       26888889999988765432211000000000 000        00 00011123


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ++.++|+|+++..++.+..  ..|+.+.+.|
T Consensus       189 ~i~~~Dva~~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          189 LNYEEDIAKYTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             EECHHHHHHHHHHHHHCGG--GTTEEEECCC
T ss_pred             EeeHHHHHHHHHHHHhCcc--ccCeEEEEeC
Confidence            5789999999999997643  2478788765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.62  E-value=7.4e-15  Score=136.61  Aligned_cols=206  Identities=15%  Similarity=0.026  Sum_probs=137.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++++|||||+|+||++++++|+++|++|++++|+....              ..+.+|+.+.  .       .+.+..+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~--~-------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNP--A-------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSC--C-------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccch--h-------HHhcCCCC
Confidence            67999999999999999999999999999999987652              1156777642  1       22335799


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CC
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GL  163 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~  163 (285)
                      +|||+||....       ...+.+.....+++|+.++..+++++..   ..+..++|++||.+.+..           .+
T Consensus       204 ~Vih~A~~~~~-------~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~  273 (516)
T 3oh8_A          204 VLVHLAGEPIF-------GRFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESES  273 (516)
T ss_dssp             EEEECCCC------------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCC
T ss_pred             EEEECCCCccc-------cccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCC
Confidence            99999997422       1345667788999999999999997442   345678999999664320           11


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh-----
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA-----  238 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  238 (285)
                      +...|+.+|...+.+.+.+    ...|++++.+.||.+.++... ....                ..........     
T Consensus       274 ~~~~y~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~-~~~~----------------~~~~~~~g~~~~~g~  332 (516)
T 3oh8_A          274 GDDFLAEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGG-MLPL----------------LKTLFSTGLGGKFGD  332 (516)
T ss_dssp             CSSHHHHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBS-HHHH----------------HHHTTC---CCCCTT
T ss_pred             CcChHHHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCC-hHHH----------------HHHHHHhCCCcccCC
Confidence            3456788888777665433    236899999999999986521 1100                0000000000     


Q ss_pred             -cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          239 -NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       239 -~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                       .....++.++|+|++++.++....  ..| .+++-+|..
T Consensus       333 g~~~~~~i~v~Dva~ai~~~l~~~~--~~g-~~ni~~~~~  369 (516)
T 3oh8_A          333 GTSWFSWIAIDDLTDIYYRAIVDAQ--ISG-PINAVAPNP  369 (516)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHCTT--CCE-EEEESCSCC
T ss_pred             CCceEceEeHHHHHHHHHHHHhCcc--cCC-cEEEECCCC
Confidence             011234678999999999996543  344 566655543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.60  E-value=2.6e-15  Score=130.89  Aligned_cols=199  Identities=12%  Similarity=0.095  Sum_probs=125.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+..+.+.  ...+.++++|++|.+++.++++       .+|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ--SLGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh--cCCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            579999999999999999999999999999998752222222222  2357889999999998887765       5999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccC--C---CCCccch
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMG--G---LGPHAYT  169 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~--~---~~~~~Y~  169 (285)
                      |||+++...                       +.+...+++++.    +.+ ..++|+ |+.+....  .   |....| 
T Consensus        83 vi~~a~~~~-----------------------~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-  133 (318)
T 2r6j_A           83 VISALAFPQ-----------------------ILDQFKILEAIK----VAGNIKRFLP-SDFGVEEDRINALPPFEALI-  133 (318)
T ss_dssp             EEECCCGGG-----------------------STTHHHHHHHHH----HHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-
T ss_pred             EEECCchhh-----------------------hHHHHHHHHHHH----hcCCCCEEEe-eccccCcccccCCCCcchhH-
Confidence            999998531                       223344444443    233 456763 44332111  1   113468 


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      .+|.+++.+++.       .++++..++||.+..+..........   ..    ...     ... .-......++.++|
T Consensus       134 ~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~---~~----~~~-----~~~-~~~~~~~~~i~~~D  193 (318)
T 2r6j_A          134 ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYD---PK----DEI-----TVY-GTGEAKFAMNYEQD  193 (318)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTC---CC----SEE-----EEE-TTSCCEEEEECHHH
T ss_pred             HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccC---CC----Cce-----EEe-cCCCceeeEeeHHH
Confidence            999999888764       46888899999887654332211100   00    000     000 00011123568999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecC
Q 040531          250 IAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      +|+++..++.+..  ..|+.+.+.|
T Consensus       194 va~~~~~~l~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          194 IGLYTIKVATDPR--ALNRVVIYRP  216 (318)
T ss_dssp             HHHHHHHHTTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHhcCcc--ccCeEEEecC
Confidence            9999999997643  2366777654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.59  E-value=6.7e-15  Score=127.56  Aligned_cols=203  Identities=13%  Similarity=0.141  Sum_probs=127.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh-----HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-----IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++||||+|+||++++++|+++|++|++++|+....     .+..+.+.  ...+.++++|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            46799999999999999999999999999999985321     11112221  3458889999999999888765     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcccccccC-----CC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTASVASLMG-----GL  163 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss~~~~~~-----~~  163 (285)
                        .+|+|||+++...                       +.+...+++++..    .+ ..++|+ |+.+....     .|
T Consensus        77 --~~d~vi~~a~~~~-----------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p  126 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ-----------------------IESQVNIIKAIKE----VGTVKRFFP-SEFGNDVDNVHAVEP  126 (308)
T ss_dssp             --TCSEEEECCCGGG-----------------------SGGGHHHHHHHHH----HCCCSEEEC-SCCSSCTTSCCCCTT
T ss_pred             --CCCEEEECCcchh-----------------------hhhHHHHHHHHHh----cCCCceEee-cccccCccccccCCc
Confidence              5999999998531                       2334445555433    33 457763 44432211     12


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV  243 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ....| .+|.+++.+++.       .++++..+.||.+.++........... .   ......     ..... ......
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~-~---~~~~~~-----~~~~~-~~~~~~  188 (308)
T 1qyc_A          127 AKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLT-A---PPRDKV-----VILGD-GNARVV  188 (308)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCS-S---CCSSEE-----EEETT-SCCEEE
T ss_pred             chhHH-HHHHHHHHHHHh-------cCCCeEEEEeceecccccccccccccc-C---CCCCce-----EEecC-CCceEE
Confidence            23568 999999988764       268888899998877654322110000 0   000000     00000 011123


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          244 TLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       244 ~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      ++.++|+|+++..++.+..  ..|+.+.+.|
T Consensus       189 ~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          189 FVKEEDIGTFTIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             EECHHHHHHHHHTTSSCGG--GTTEEEECCC
T ss_pred             EecHHHHHHHHHHHHhCcc--ccCeEEEEeC
Confidence            4688999999999987643  2467777654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.41  E-value=2.9e-14  Score=122.79  Aligned_cols=111  Identities=16%  Similarity=0.206  Sum_probs=84.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++|+++||||+||||++++..|+++|++|++++|+.++.+++.+++... ..+.++.+|+++.+++.++++      
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence            4578999999999999999999999999999999999998888877766432 245678899999988877654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCH-HHHHHHHHhhhhhHH
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDA-NEFDNIIRINVRGAA  132 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  132 (285)
                       .+|+||||+|.....   .++.+.+. +.+...+++|+.+++
T Consensus       188 -~~DvlVn~ag~g~~~---~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 -GAHFVFTAGAIGLEL---LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -TCSEEEECCCTTCCS---BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -hCCEEEECCCccccC---CChhHcCchHHHHHHHHhhhhhhH
Confidence             489999999864221   12222222 445557788888776

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.41  E-value=4.6e-11  Score=102.97  Aligned_cols=206  Identities=16%  Similarity=0.071  Sum_probs=126.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.+|||||+|.||++++++|.++|++|+++.|++..            .++   ..|     .+      ..+....+|.
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~-----~~------~~~~l~~~d~   54 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD-----EL------AASGLPSCDA   54 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH-----HH------HHHCCCSCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc-----hh------hHhhccCCCE
Confidence            359999999999999999999999999999987542            111   111     11      1123457999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-----------C
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-----------G  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-----------~  164 (285)
                      +||.|+....    .+....+.+..+..++.|+.++..+.+.+...  ..+..++|+.||.+......           +
T Consensus        55 vihla~~~i~----~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~  128 (298)
T 4b4o_A           55 AVNLAGENIL----NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD  128 (298)
T ss_dssp             EEECCCCCSS----CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC
T ss_pred             EEEeccCccc----chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccc
Confidence            9999985322    33344577777888999999998888776542  23345677777765432211           1


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh------
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA------  238 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  238 (285)
                      ...|+..|...+.     +......++++..+.|+.|..+..... .                ...........      
T Consensus       129 ~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~-~----------------~~~~~~~~~~~~~~g~g  186 (298)
T 4b4o_A          129 FDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM-G----------------HMLLPFRLGLGGPIGSG  186 (298)
T ss_dssp             SSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH-H----------------HHHHHHHTTCCCCBTTS
T ss_pred             cchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch-h----------------HHHHHHhcCCcceeccc
Confidence            2234444433332     122345789999999999987642111 0                01111111111      


Q ss_pred             cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .....++..+|+++++.+++....  ..| .+++-++-..
T Consensus       187 ~~~~~~ihv~Dva~a~~~~~~~~~--~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          187 HQFFPWIHIGDLAGILTHALEANH--VHG-VLNGVAPSSA  223 (298)
T ss_dssp             CSBCCEEEHHHHHHHHHHHHHCTT--CCE-EEEESCSCCC
T ss_pred             CceeecCcHHHHHHHHHHHHhCCC--CCC-eEEEECCCcc
Confidence            111224678999999999986543  345 6777665543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.18  E-value=5.2e-11  Score=104.29  Aligned_cols=163  Identities=13%  Similarity=0.062  Sum_probs=107.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCc--hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDD--AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++++||||+|.||.+++..|+++|+       .|+++++++  +........+......+  + .|+.+.+++.+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence            4799999999999999999999986       799999865  22222222332211122  2 4665443333332   


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-------
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-------  159 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-------  159 (285)
                          ...|+|||.||....     +  ..+   ..+.+++|+.++..+++++...-  ....+++++|+....       
T Consensus        79 ----~~~D~Vih~Ag~~~~-----~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~  142 (327)
T 1y7t_A           79 ----KDADYALLVGAAPRK-----A--GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYK  142 (327)
T ss_dssp             ----TTCSEEEECCCCCCC-----T--TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred             ----CCCCEEEECCCcCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHH
Confidence                369999999997532     1  122   34679999999999999987642  134578888875421       


Q ss_pred             -c-CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccc
Q 040531          160 -M-GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVAT  203 (285)
Q Consensus       160 -~-~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t  203 (285)
                       . +.++...|+.+|...+.+.+.++..+.   +.+..++|..|..
T Consensus       143 ~~~~~~p~~~yg~tkl~~er~~~~~a~~~g---~~~~~vr~~~V~G  185 (327)
T 1y7t_A          143 NAPGLNPRNFTAMTRLDHNRAKAQLAKKTG---TGVDRIRRMTVWG  185 (327)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHHT---CCGGGEECCEEEB
T ss_pred             HcCCCChhheeccchHHHHHHHHHHHHHhC---cChhheeeeEEEc
Confidence             1 244556799999999999999888753   4444445444433

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.13  E-value=1.7e-10  Score=94.89  Aligned_cols=79  Identities=19%  Similarity=0.210  Sum_probs=62.1

Q ss_pred             cCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC
Q 040531           12 TLEGKIAIVTGG----------------ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL   75 (285)
Q Consensus        12 ~l~~k~vlItGa----------------s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~   75 (285)
                      +|+||++|||||                |||||+++|++|+++|+.|++++++.. +.        ....+  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCc
Confidence            689999999999                689999999999999999999988652 11        01122  3468877


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 040531           76 EQDIQNLINVTISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        76 ~~~i~~~~~~i~~~~~~id~lv~~ag~~~  104 (285)
                      .++   +++.+.+.++++|++|||||+..
T Consensus        74 ~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            544   56667778899999999999854

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.91  E-value=8e-09  Score=75.91  Aligned_cols=75  Identities=23%  Similarity=0.175  Sum_probs=62.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|+++..+...      ...+.++.+|+++.+++.++++       .
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~   69 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------G   69 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------C
Confidence            3578999999 999999999999999 89999999988766554      2346778999999887776653       6


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|++++.
T Consensus        70 ~d~vi~~~~~   79 (118)
T 3ic5_A           70 FDAVISAAPF   79 (118)
T ss_dssp             CSEEEECSCG
T ss_pred             CCEEEECCCc
Confidence            9999999863

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.86  E-value=6.8e-09  Score=85.47  Aligned_cols=79  Identities=14%  Similarity=0.267  Sum_probs=58.8

Q ss_pred             CCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHH
Q 040531           14 EGKIAIVTGG----------------ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        14 ~~k~vlItGa----------------s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~   77 (285)
                      +||++|||||                ||++|.++|++|+++|+.|++++|+.... .      .....+..  .|+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~------~~~~~~~~--~~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P------EPHPNLSI--REIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C------CCCTTEEE--EECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c------cCCCCeEE--EEHh---
Confidence            5899999999                78899999999999999999999875321 0      00122333  3444   


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCC
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~  104 (285)
                      +++++++.+.+.++.+|++|+||++..
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence            456666777777889999999999753

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.85  E-value=2.4e-09  Score=83.53  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=64.5

Q ss_pred             CchhHHHHHHHHHCCCeEEEEecCchhhH---HHHHHhhcCCCceEEEeccCCCH--HHHHHHHHHHHHHcCCccEEEEC
Q 040531           25 RGIGEATVRLFVKHGAKVVIADIDDAAGI---ALADSLLSSSPLVTYLHCDVSLE--QDIQNLINVTISKHGRLDILFNN   99 (285)
Q Consensus        25 ~gIG~~ia~~la~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~~~~D~s~~--~~i~~~~~~i~~~~~~id~lv~~   99 (285)
                      +-++.++++.|++.|++|++..|+.....   +..+.+.+.+.++..+++|++++  ++++++++.+.+.+|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            45789999999999999999988755432   23444445577888999999999  9999999999988999 999999


Q ss_pred             CCCC
Q 040531          100 AGVL  103 (285)
Q Consensus       100 ag~~  103 (285)
                      ||+.
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.75  E-value=5.8e-08  Score=87.29  Aligned_cols=82  Identities=16%  Similarity=0.192  Sum_probs=70.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC---CeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG---AKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g---~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+|| |+||+++++.|++.|   ..|++++|+.++++++.+++... +.++..+.+|+++.++++++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 899999999999998   38999999999999888877543 246889999999999999988764     


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      ++|+|||+++..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            699999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.72  E-value=5.1e-08  Score=78.70  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=71.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|++++|+||++|||+++++.+...|++|++++|+++..+.+. ++   +...   .+|.++.+..+.+.+.. . .+.+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~---g~~~---~~d~~~~~~~~~~~~~~-~-~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL---GVEY---VGDSRSVDFADEILELT-D-GYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TT---CCSE---EEETTCSTHHHHHHHHT-T-TCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE---EeeCCcHHHHHHHHHHh-C-CCCC
Confidence            6899999999999999999999999999999999877654432 22   3222   24777654444333221 1 1369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      |++|+|+|.       .                       .++..++.++  ..|+++.+++..
T Consensus       109 D~vi~~~g~-------~-----------------------~~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          109 DVVLNSLAG-------E-----------------------AIQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             EEEEECCCT-------H-----------------------HHHHHHHTEE--EEEEEEECSCGG
T ss_pred             eEEEECCch-------H-----------------------HHHHHHHHhc--cCCEEEEEcCCC
Confidence            999999872       0                       1345566664  468999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.66  E-value=6.5e-11  Score=107.42  Aligned_cols=47  Identities=23%  Similarity=0.464  Sum_probs=41.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD   57 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~   57 (285)
                      .+.+.||+++|||++ +||+++|+.|+..|++|+++++++....+...
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            346899999999988 99999999999999999999998877665543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.65  E-value=7.2e-08  Score=87.79  Aligned_cols=79  Identities=15%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.++.+++.+.    ...+..+.+|+++.+++.++++       .
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~~~~~~~~~Dv~d~~~l~~~l~-------~   68 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEVA-------K   68 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----CTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----cCCceEEEeecCCHHHHHHHHc-------C
Confidence            3578999998 79999999999999999999999988766544332    2346788999999888877653       6


Q ss_pred             ccEEEECCCCC
Q 040531           93 LDILFNNAGVL  103 (285)
Q Consensus        93 id~lv~~ag~~  103 (285)
                      +|+|||+++..
T Consensus        69 ~DvVIn~a~~~   79 (450)
T 1ff9_A           69 HDLVISLIPYT   79 (450)
T ss_dssp             SSEEEECCC--
T ss_pred             CcEEEECCccc
Confidence            99999999863

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.60  E-value=1.2e-08  Score=94.71  Aligned_cols=103  Identities=19%  Similarity=0.191  Sum_probs=67.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.++++++.+.+.   .++.    ++.+   +..+      ...
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~d---l~~~------~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTD---LDNY------HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTT---TTTC--------C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHH---hhhc------ccc
Confidence            578999999999 599999999999999999999999998888777662   2222    2212   1100      113


Q ss_pred             CccEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHhhhhhH
Q 040531           92 RLDILFNNAGVLGNQ-SKHKSITDFDANEFDNIIRINVRGA  131 (285)
Q Consensus        92 ~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~  131 (285)
                      .+|+||||+|+.... ....++.+.+.+.|...+++|+.+.
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            589999999974321 0113455566677777888888765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.58  E-value=1.3e-08  Score=87.27  Aligned_cols=81  Identities=17%  Similarity=0.117  Sum_probs=60.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+++|||++ |+|++++..|++.| +|++++|+.++++++.+++.........+.+|+++.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            6789999999997 99999999999999 999999999888887776632110000123444441          33457


Q ss_pred             CccEEEECCCCCC
Q 040531           92 RLDILFNNAGVLG  104 (285)
Q Consensus        92 ~id~lv~~ag~~~  104 (285)
                      .+|+||||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.58  E-value=1.6e-07  Score=83.38  Aligned_cols=107  Identities=19%  Similarity=0.265  Sum_probs=76.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+   +..   +.+|.++.+++.+++.       
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~-------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ-------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence            588999999999 99999999999999999999999988876655433   222   4567778777766653       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ..|++|++++.....                       .+..+.+..++.|+  +.+.||++++..
T Consensus       229 ~~DvVi~~~g~~~~~-----------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          229 HADLLIGAVLVPGAK-----------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             HCSEEEECCC------------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             CCCEEEECCCCCccc-----------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            589999999863210                       01223466677774  468899998753

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.58  E-value=1e-07  Score=83.28  Aligned_cols=79  Identities=19%  Similarity=0.231  Sum_probs=60.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++|||||+||||+++++.+...|++|+++++++++++.+ +++   +..   ..+|.++.+++.+.+.++..  +.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKASP--DGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHCT--TCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHhC--CCC
Confidence            689999999999999999999999999999999988876655 444   222   23577764444444444432  579


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |++|+|+|
T Consensus       216 d~vi~~~g  223 (333)
T 1v3u_A          216 DCYFDNVG  223 (333)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.50  E-value=4.5e-07  Score=82.80  Aligned_cols=82  Identities=15%  Similarity=0.139  Sum_probs=63.6

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ...++++++++|+|+ |++|++++..|++. |++|++++|+.++++++.+.     ..+..+.+|+++.+++.++++   
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH---
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc---
Confidence            345678999999997 99999999999998 78899999998887766543     135677899999888776654   


Q ss_pred             HHcCCccEEEECCCCC
Q 040531           88 SKHGRLDILFNNAGVL  103 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (285)
                          .+|+|||+++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                699999998863

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.50  E-value=8.2e-07  Score=76.78  Aligned_cols=84  Identities=18%  Similarity=0.179  Sum_probs=64.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC---chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID---DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++|++||+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+++....+ ..+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence            4689999999998 7999999999999998 79999999   8888888777754222 2333456666666554433  


Q ss_pred             HHHcCCccEEEECCCCC
Q 040531           87 ISKHGRLDILFNNAGVL  103 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (285)
                           ..|+|||+....
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 689999987653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.45  E-value=6.8e-07  Score=67.93  Aligned_cols=76  Identities=20%  Similarity=0.131  Sum_probs=59.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++.++++|+|+ |.+|+++++.|.++|+.|++++++++..+.+.+.      .+.++.+|.++.+.++++      ....
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~------~~~~   70 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSL------DLEG   70 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHS------CCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhC------Cccc
Confidence            34578999998 7799999999999999999999998876655432      367789999998876654      1246


Q ss_pred             ccEEEECCC
Q 040531           93 LDILFNNAG  101 (285)
Q Consensus        93 id~lv~~ag  101 (285)
                      .|.+|.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            899998765

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.44  E-value=2e-07  Score=70.76  Aligned_cols=77  Identities=18%  Similarity=0.236  Sum_probs=56.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++++..+..    .+.  ...++.+|.++.+.+.++      ...
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~--~~~~~~~d~~~~~~l~~~------~~~   69 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY--ATHAVIANATEENELLSL------GIR   69 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT--CSEEEECCTTCHHHHHTT------TGG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh--CCEEEEeCCCCHHHHHhc------CCC
Confidence            466788999998 9999999999999999999999987654332    221  235678899987655432      134


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      ..|++|++++
T Consensus        70 ~~d~vi~~~~   79 (144)
T 2hmt_A           70 NFEYVIVAIG   79 (144)
T ss_dssp             GCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999876

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.37  E-value=9.3e-07  Score=77.68  Aligned_cols=104  Identities=16%  Similarity=0.185  Sum_probs=75.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+|+||+.+++.+...|++|++++|++++.+.+ .++   +..   ..+|+++.+++.+.+.++...  .+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~~--~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGE---VFIDFTKEKDIVGAVLKATDG--GA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCC---EEEETTTCSCHHHHHHHHHTS--CE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCc---eEEecCccHhHHHHHHHHhCC--CC
Confidence            689999999999999999999999999999999988876433 333   222   224777555566555554433  79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      |++|+++|..                             ..++.+++.++  ..|+++.+++..
T Consensus       240 D~vi~~~g~~-----------------------------~~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          240 HGVINVSVSE-----------------------------AAIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             EEEEECSSCH-----------------------------HHHHHHTTSEE--EEEEEEECCCCT
T ss_pred             CEEEECCCcH-----------------------------HHHHHHHHHHh--cCCEEEEEeCCC
Confidence            9999998831                             03455566663  458999988754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.37  E-value=3.1e-06  Score=73.87  Aligned_cols=151  Identities=11%  Similarity=0.016  Sum_probs=99.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecC----chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA-------KVVIADID----DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      .+.++||||+|.+|.+++..|+..|.       .|++++++    .++++.....+......+.   .|+....+..+. 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA-   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH-
Confidence            45799999999999999999999885       79999988    5445444444433211121   233322222222 


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc----
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL----  159 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~----  159 (285)
                            +...|+||+.||....       ...+.   .+.+..|+.....+++.+...-  ...+++|++|.....    
T Consensus        81 ------l~~aD~Vi~~ag~~~~-------~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~  142 (329)
T 1b8p_A           81 ------FKDADVALLVGARPRG-------PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYI  142 (329)
T ss_dssp             ------TTTCSEEEECCCCCCC-------TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHH
T ss_pred             ------hCCCCEEEEeCCCCCC-------CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHH
Confidence                  3468999999997432       12233   3468899998888888876642  135789999874421    


Q ss_pred             ----c-CCCCCccchhhHHHHHHHHHHHHHHhC
Q 040531          160 ----M-GGLGPHAYTVSKHAIVGLTKNTACELG  187 (285)
Q Consensus       160 ----~-~~~~~~~Y~asKaa~~~l~~~la~e~~  187 (285)
                          . +.|....|+.++.--..+...+|..+.
T Consensus       143 ~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          143 AMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence                1 334445688887666777778888775

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.37  E-value=9.5e-07  Score=75.00  Aligned_cols=76  Identities=12%  Similarity=0.166  Sum_probs=58.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+.... .+.  ..|+   ++       +.+  +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~-------~~~--~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DE-------LEG--H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GG-------GTT--C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HH-------hcc--C
Confidence            578999999998 799999999999999999999999998888877764321 221  2333   11       111  5


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      .+|+||++++..
T Consensus       180 ~~DivVn~t~~~  191 (271)
T 1nyt_A          180 EFDLIINATSSG  191 (271)
T ss_dssp             CCSEEEECCSCG
T ss_pred             CCCEEEECCCCC
Confidence            899999999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.33  E-value=8e-07  Score=77.96  Aligned_cols=104  Identities=18%  Similarity=0.159  Sum_probs=73.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|+||+.+++.+...|++|+++++++++++.+.+++   +...   .+|.++.+++.+.+.++..  +.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~--~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCFP--NGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence            6899999999999999999999999999999999888766554333   3222   2366654344444444322  479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      |++|+|+|..                              .++..++.++  ..|+++.++...
T Consensus       227 d~vi~~~g~~------------------------------~~~~~~~~l~--~~G~~v~~G~~~  258 (345)
T 2j3h_A          227 DIYFENVGGK------------------------------MLDAVLVNMN--MHGRIAVCGMIS  258 (345)
T ss_dssp             EEEEESSCHH------------------------------HHHHHHTTEE--EEEEEEECCCGG
T ss_pred             cEEEECCCHH------------------------------HHHHHHHHHh--cCCEEEEEcccc
Confidence            9999998730                              1444555553  468999887654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=1.9e-06  Score=74.93  Aligned_cols=104  Identities=13%  Similarity=0.183  Sum_probs=72.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+||||+.+++.+...|++|+++++++++.+.+.+ +   +...   .+|.++.+..+.+.+.. . ...+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~-~-~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEIT-G-GKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHT-T-TCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHh-C-CCCc
Confidence            58999999999999999999999999999999998877655543 3   2222   24666644444433321 1 2369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      |++|+|+|.  .                            .++..++.++  ..|+++.+++..+
T Consensus       211 D~vi~~~g~--~----------------------------~~~~~~~~l~--~~G~iv~~g~~~~  243 (327)
T 1qor_A          211 RVVYDSVGR--D----------------------------TWERSLDCLQ--RRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEECSCG--G----------------------------GHHHHHHTEE--EEEEEEECCCTTC
T ss_pred             eEEEECCch--H----------------------------HHHHHHHHhc--CCCEEEEEecCCC
Confidence            999999982  1                            1345556663  4689999987543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.25  E-value=8.1e-06  Score=74.19  Aligned_cols=109  Identities=19%  Similarity=0.351  Sum_probs=74.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEE--eccCC---------CHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL--HCDVS---------LEQDIQNL   82 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~--~~D~s---------~~~~i~~~   82 (285)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+ +++   +....+-  ..|+.         +.++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---GCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCCEEEecccccccccccccccccchhhhHH
Confidence            689999999999999999999999999999999888776554 333   3332222  12221         23455555


Q ss_pred             HHHHHHHcC-CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           83 INVTISKHG-RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        83 ~~~i~~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      .+.+.+..+ .+|++|+++|..                              .++..++.+  +..|+++.+++..+
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G~~------------------------------~~~~~~~~l--~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTGRV------------------------------TFGLSVIVA--RRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSCHH------------------------------HHHHHHHHS--CTTCEEEESCCTTC
T ss_pred             HHHHHHHhCCCceEEEECCCch------------------------------HHHHHHHHH--hcCCEEEEEecCCC
Confidence            666666544 699999998830                              124455555  45699999987643

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.25  E-value=2.3e-06  Score=74.74  Aligned_cols=80  Identities=15%  Similarity=0.193  Sum_probs=58.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .++++||+||+||||+++++.+...|++|+++++++++++.+.+ +   +...   .+|.++.+..+.+.+ ... ...+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~-~~~-~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVRE-ITG-GKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHH-HHT-TCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHH-HhC-CCCC
Confidence            68999999999999999999999999999999999877665533 3   2222   246666444333332 211 2369


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.24  E-value=2.9e-06  Score=74.07  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=72.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|+||..+++.+...|++|+++++++++.+.+.+++   +...   .+|.++.+..+.+.+ ..  .+.+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~-~~--~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAGLKR-EC--PKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHHHHHHH-HC--TTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHHHHH-hc--CCCc
Confidence            6899999999999999999999999999999999988876664444   2222   246555333333222 22  2479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      |++|+|+|..                              .++.+++.++  ..|+++.++....
T Consensus       220 d~vi~~~g~~------------------------------~~~~~~~~l~--~~G~iv~~G~~~~  252 (336)
T 4b7c_A          220 DVFFDNVGGE------------------------------ILDTVLTRIA--FKARIVLCGAISQ  252 (336)
T ss_dssp             EEEEESSCHH------------------------------HHHHHHTTEE--EEEEEEECCCGGG
T ss_pred             eEEEECCCcc------------------------------hHHHHHHHHh--hCCEEEEEeeccc
Confidence            9999998830                              2344555563  4689999887653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.23  E-value=6.3e-06  Score=70.24  Aligned_cols=82  Identities=24%  Similarity=0.320  Sum_probs=60.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+......+.+...+..+   +.+.+.     
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~-----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA-----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh-----
Confidence            3689999999998 7999999999999998 69999999999988888775433333333344433   222222     


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                        ..|+|||+....
T Consensus       194 --~~DiVInaTp~G  205 (283)
T 3jyo_A          194 --AADGVVNATPMG  205 (283)
T ss_dssp             --HSSEEEECSSTT
T ss_pred             --cCCEEEECCCCC
Confidence              479999987653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.23  E-value=1.9e-06  Score=75.92  Aligned_cols=104  Identities=18%  Similarity=0.172  Sum_probs=71.7

Q ss_pred             CC--cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           14 EG--KIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        14 ~~--k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .|  +++||+||+||||+.+++.+...|+ +|+++++++++.+.+.+++   +..   ..+|.++.+..+. +.+...  
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~~~-~~~~~~--  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDNVAEQ-LRESCP--  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSCHHHH-HHHHCT--
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchHHHHH-HHHhcC--
Confidence            47  9999999999999999999999999 9999999887766554433   222   2346665332222 222221  


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      +.+|++|+|+|.                              ..++.+++.++  ..|+++.++....
T Consensus       229 ~~~d~vi~~~G~------------------------------~~~~~~~~~l~--~~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 AGVDVYFDNVGG------------------------------NISDTVISQMN--ENSHIILCGQISQ  264 (357)
T ss_dssp             TCEEEEEESCCH------------------------------HHHHHHHHTEE--EEEEEEECCCGGG
T ss_pred             CCCCEEEECCCH------------------------------HHHHHHHHHhc--cCcEEEEECCccc
Confidence            269999999882                              02344566663  4689999887543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.21  E-value=3.4e-06  Score=74.34  Aligned_cols=80  Identities=14%  Similarity=0.215  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+||||+.+++.+...|++|+++++++++++.+ +++   +..   ..+|.++.+..+.+.+ ... .+.+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~-~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA---AGFNYKKEDFSEATLK-FTK-GAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS---EEEETTTSCHHHHHHH-HTT-TSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc---EEEecCChHHHHHHHH-Hhc-CCCc
Confidence            589999999999999999999999999999999998876655 344   222   2246665443333322 111 1369


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.17  E-value=4.4e-06  Score=73.53  Aligned_cols=79  Identities=14%  Similarity=0.167  Sum_probs=56.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+||||+.+++.+...|++|+++++++++.+.+ +++   +..   ..+|.++.+..+.+.+ ... ...+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~---~~~d~~~~~~~~~~~~-~~~-~~~~  240 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAH---EVFNHREVNYIDKIKK-YVG-EKGI  240 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSTTHHHHHHH-HHC-TTCE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc---CCC---EEEeCCCchHHHHHHH-HcC-CCCc
Confidence            589999999999999999999999999999999988876633 333   222   2246666443333322 111 2369


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999987

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.15  E-value=1.1e-05  Score=70.70  Aligned_cols=104  Identities=13%  Similarity=0.123  Sum_probs=71.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .++++||+||+|+||+.++..+...|++|+++++++++.+.+. ++   +...   .+|.++.+ +.+.+.++.. ...+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~-~~~~~~~~~~-~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPD-WPKEVRRLTG-GKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTT-HHHHHHHHTT-TTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCccc-HHHHHHHHhC-CCCc
Confidence            5899999999999999999999999999999999888766553 33   2222   24666543 2222222211 2379


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      |++|+++| . .                            .++.+++.++  ..|+++.+++...
T Consensus       237 d~vi~~~g-~-~----------------------------~~~~~~~~l~--~~G~~v~~g~~~~  269 (343)
T 2eih_A          237 DKVVDHTG-A-L----------------------------YFEGVIKATA--NGGRIAIAGASSG  269 (343)
T ss_dssp             EEEEESSC-S-S----------------------------SHHHHHHHEE--EEEEEEESSCCCS
T ss_pred             eEEEECCC-H-H----------------------------HHHHHHHhhc--cCCEEEEEecCCC
Confidence            99999998 2 1                            1344555563  4689999887643

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.14  E-value=1.7e-05  Score=60.97  Aligned_cols=79  Identities=13%  Similarity=0.049  Sum_probs=59.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      |+.+.++|+|+ |.+|+.+++.|.+.|+.|+++++++ +..+...+..   ...+.++.+|.++.+.+.++      ...
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~   70 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GID   70 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTT
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Chh
Confidence            35677889986 9999999999999999999999974 4444443332   23478899999998876554      123


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (153)
T 1id1_A           71 RCRAILALSD   80 (153)
T ss_dssp             TCSEEEECSS
T ss_pred             hCCEEEEecC
Confidence            6898998754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.13  E-value=1.4e-05  Score=68.87  Aligned_cols=84  Identities=17%  Similarity=0.195  Sum_probs=60.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC---chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID---DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++|++||+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.+++....+ ..+...+..+.+...+.+.  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEALA--  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhcc--
Confidence            4678999999998 8999999999999998 79999999   7778887777654221 2223345555433222222  


Q ss_pred             HHHcCCccEEEECCCCC
Q 040531           87 ISKHGRLDILFNNAGVL  103 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (285)
                           ..|+|||+....
T Consensus       220 -----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -----SADILTNGTKVG  231 (312)
T ss_dssp             -----HCSEEEECSSTT
T ss_pred             -----CceEEEECCcCC
Confidence                 479999987654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.10  E-value=0.00015  Score=62.94  Aligned_cols=146  Identities=16%  Similarity=0.127  Sum_probs=87.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCC--ceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSP--LVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +.++||||+|.+|..++..|+++|  ..|++++++++  +.....+.....  ++..    +++..+..+++       .
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------~   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------T   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH-------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc-------C
Confidence            579999999999999999999998  78999998876  222223322111  2222    22334444333       3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc------------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL------------  159 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~------------  159 (285)
                      ..|++|++||.....       ..+.+   +.+..|+.....+.+.+.+.-   ..+.++++|...+.            
T Consensus        76 gaDvVi~~ag~~~~~-------g~~r~---dl~~~N~~~~~~i~~~i~~~~---p~~~viv~SNPv~~~~~~~t~~~~~~  142 (326)
T 1smk_A           76 GMDLIIVPAGVPRKP-------GMTRD---DLFKINAGIVKTLCEGIAKCC---PRAIVNLISNPVNSTVPIAAEVFKKA  142 (326)
T ss_dssp             TCSEEEECCCCCCCS-------SCCCS---HHHHHHHHHHHHHHHHHHHHC---TTSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCcCCCC-------CCCHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCchHHHHHHHHHHHHHc
Confidence            799999999974321       11222   448889999888888877643   24555555443333            


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHhC
Q 040531          160 MGGLGPHAYTVSKHAIVGLTKNTACELG  187 (285)
Q Consensus       160 ~~~~~~~~Y~asKaa~~~l~~~la~e~~  187 (285)
                      .+.|.....+..-.=...+-..+|..+.
T Consensus       143 ~~~p~~rviG~~~Ld~~r~~~~la~~l~  170 (326)
T 1smk_A          143 GTYDPKRLLGVTMLDVVRANTFVAEVLG  170 (326)
T ss_dssp             TCCCTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             cCCCcccEEEEeehHHHHHHHHHHHHhC
Confidence            1234334444432224445556666654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.03  E-value=1.4e-05  Score=70.18  Aligned_cols=80  Identities=16%  Similarity=0.242  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .++++||+||+|+||+.++..+... |++|+++++++++.+.+ +++   +...   .+|.++.+..+.+ .++... +.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~-~~~~~~-~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GADY---VINASMQDPLAEI-RRITES-KG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCSE---EEETTTSCHHHHH-HHHTTT-SC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCE---EecCCCccHHHHH-HHHhcC-CC
Confidence            6899999999999999999999999 99999999988876654 333   2222   2355553332222 222211 47


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.03  E-value=1.5e-05  Score=70.37  Aligned_cols=100  Identities=18%  Similarity=0.247  Sum_probs=68.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD---AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +++|+++||+|| |+||..++..+...|++|++++++.   ++.+. ..++   +.  ..+  | ++  ++.+.+.+ . 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~---ga--~~v--~-~~--~~~~~~~~-~-  243 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET---KT--NYY--N-SS--NGYDKLKD-S-  243 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH---TC--EEE--E-CT--TCSHHHHH-H-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh---CC--cee--c-hH--HHHHHHHH-h-
Confidence            345999999999 9999999999999999999999988   66533 3333   22  222  5 44  22222222 1 


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHH-HHHHHhhcCCCCceEEEEcccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM-KYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      . +.+|++|+++|..      .                       .+ +.+++.++  ..|++++++...
T Consensus       244 ~-~~~d~vid~~g~~------~-----------------------~~~~~~~~~l~--~~G~iv~~g~~~  281 (366)
T 2cdc_A          244 V-GKFDVIIDATGAD------V-----------------------NILGNVIPLLG--RNGVLGLFGFST  281 (366)
T ss_dssp             H-CCEEEEEECCCCC------T-----------------------HHHHHHGGGEE--EEEEEEECSCCC
T ss_pred             C-CCCCEEEECCCCh------H-----------------------HHHHHHHHHHh--cCCEEEEEecCC
Confidence            2 6799999999842      0                       23 55666663  458999887653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.03  E-value=2e-05  Score=66.86  Aligned_cols=76  Identities=12%  Similarity=0.164  Sum_probs=57.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.... ++..  +|+   +++       .+  +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~-------~~--~  179 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSI-------PL--Q  179 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGC-------CC--S
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHh-------cc--C
Confidence            578999999998 799999999999999999999999999888887764321 2322  232   111       01  4


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      ..|+||++++..
T Consensus       180 ~~DivIn~t~~~  191 (272)
T 1p77_A          180 TYDLVINATSAG  191 (272)
T ss_dssp             CCSEEEECCCC-
T ss_pred             CCCEEEECCCCC
Confidence            799999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.01  E-value=1.8e-05  Score=69.57  Aligned_cols=79  Identities=22%  Similarity=0.295  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+.+ +   +...   .+|.++.+..+.+ .+..  .+.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~---~~~~~~~~~~~~~-~~~~--~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKR---GINYRSEDFAAVI-KAET--GQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHH-HHHH--SSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCE---EEeCCchHHHHHH-HHHh--CCCc
Confidence            68999999999999999999999999999999999888765543 3   2222   1355543333333 2222  4579


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|+++|.
T Consensus       237 Dvvid~~g~  245 (353)
T 4dup_A          237 DIILDMIGA  245 (353)
T ss_dssp             EEEEESCCG
T ss_pred             eEEEECCCH
Confidence            999999883

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.01  E-value=3.3e-05  Score=57.97  Aligned_cols=75  Identities=16%  Similarity=0.261  Sum_probs=56.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++.++|+|+ |.+|+.+++.|.+.|++|++++++++..+...+..     .+.++..|.++.+.+.+.      .....|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------CcccCC
Confidence            457899987 99999999999999999999999887765554322     345678899887664321      124689


Q ss_pred             EEEECCC
Q 040531           95 ILFNNAG  101 (285)
Q Consensus        95 ~lv~~ag  101 (285)
                      ++|.+.+
T Consensus        72 ~vi~~~~   78 (140)
T 1lss_A           72 MYIAVTG   78 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEeeC
Confidence            9999854

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.96  E-value=8.9e-05  Score=64.98  Aligned_cols=79  Identities=11%  Similarity=0.106  Sum_probs=55.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++++||+||+|+||..++..+...|++|+++++++++.+.+. ++   +... +  .|..+.+-.+. +.++... ..+|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~-~--~~~~~~~~~~~-v~~~~~~-~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAH-V--LNEKAPDFEAT-LREVMKA-EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSE-E--EETTSTTHHHH-HHHHHHH-HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE-E--EECCcHHHHHH-HHHHhcC-CCCc
Confidence            489999999999999999999999999999999888866543 33   2222 2  34444332222 2222221 2699


Q ss_pred             EEEECCCC
Q 040531           95 ILFNNAGV  102 (285)
Q Consensus        95 ~lv~~ag~  102 (285)
                      ++++++|.
T Consensus       236 ~vid~~g~  243 (349)
T 3pi7_A          236 IFLDAVTG  243 (349)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999883

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.94  E-value=1.9e-05  Score=67.75  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=57.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+......  ++     +.+++       .+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~--~~-----~~~~~-------~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA--YF-----SLAEA-------ETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCC--EE-----CHHHH-------HHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCc--ee-----eHHHH-------Hhhh
Confidence            678999999998 7899999999999998 8999999999888887766321111  11     22222       2233


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+||++++..
T Consensus       203 ~~aDivIn~t~~~  215 (297)
T 2egg_A          203 AEYDIIINTTSVG  215 (297)
T ss_dssp             GGCSEEEECSCTT
T ss_pred             ccCCEEEECCCCC
Confidence            4699999998864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.91  E-value=0.00025  Score=61.30  Aligned_cols=146  Identities=12%  Similarity=0.105  Sum_probs=91.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEec--CchhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADI--DDAAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r--~~~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++||||+|.+|.+++..|+..|.  .++++++  +.++++.....+..    .+.++.+...|    +++       .+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l-------~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DEN-------LR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC-------GG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cch-------HH
Confidence            689999999999999999998884  5888998  65544432222211    11222222211    011       12


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc--------c
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL--------M  160 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~--------~  160 (285)
                      .+...|++||.||.....       ..+.   .+.++.|+.....+++++...-    .+.++++|.....        .
T Consensus        71 al~gaD~Vi~~Ag~~~~~-------g~~r---~dl~~~N~~i~~~i~~~i~~~~----~~~vlv~SNPv~~~t~~~~k~~  136 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-------GMSR---MDLAKTNAKIVGKYAKKIAEIC----DTKIFVITNPVDVMTYKALVDS  136 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-------TCCH---HHHHHHHHHHHHHHHHHHHHHC----CCEEEECSSSHHHHHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC-------CCcH---HHHHHHHHHHHHHHHHHHHHhC----CeEEEEecCcHHHHHHHHHHhh
Confidence            234799999999974321       1232   3558999999999988887642    4556666554432        2


Q ss_pred             CCCCCccchh-hHHHHHHHHHHHHHHhC
Q 040531          161 GGLGPHAYTV-SKHAIVGLTKNTACELG  187 (285)
Q Consensus       161 ~~~~~~~Y~a-sKaa~~~l~~~la~e~~  187 (285)
                      +.|....++. +..-...+-..+|..+.
T Consensus       137 ~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          137 KFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            3455556776 56556677777777764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.87  E-value=7.3e-05  Score=65.95  Aligned_cols=103  Identities=19%  Similarity=0.253  Sum_probs=69.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+.+ +   +... +  .|.++. ++.+.+.+..  .+.+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~---Ga~~-~--~~~~~~-~~~~~~~~~~--~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L---GCDR-P--INYKTE-PVGTVLKQEY--PEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSE-E--EETTTS-CHHHHHHHHC--TTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c---CCcE-E--EecCCh-hHHHHHHHhc--CCCC
Confidence            68999999999999999999999999999999998777655432 3   3332 2  244432 2222222221  2369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      |++|+++|..                              .++.+++.++  ..|+++.+++...
T Consensus       233 D~vid~~g~~------------------------------~~~~~~~~l~--~~G~iv~~g~~~~  265 (362)
T 2c0c_A          233 DVVYESVGGA------------------------------MFDLAVDALA--TKGRLIVIGFISG  265 (362)
T ss_dssp             EEEEECSCTH------------------------------HHHHHHHHEE--EEEEEEECCCGGG
T ss_pred             CEEEECCCHH------------------------------HHHHHHHHHh--cCCEEEEEeCCCC
Confidence            9999998720                              1344556664  4689999987653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.86  E-value=3.6e-05  Score=68.04  Aligned_cols=77  Identities=17%  Similarity=0.280  Sum_probs=58.0

Q ss_pred             ccCCCc--EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           11 KTLEGK--IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k--~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+|+||  .|+|.|| |++|+.+++.|++ .+.|.+++++.+.+++..       ..+..+.+|++|.+++.++++    
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~----   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK----   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT----
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh----
Confidence            345544  6999998 9999999999875 578999999988776543       235678899999998887765    


Q ss_pred             HcCCccEEEECCCCC
Q 040531           89 KHGRLDILFNNAGVL  103 (285)
Q Consensus        89 ~~~~id~lv~~ag~~  103 (285)
                         ..|+||++++..
T Consensus        77 ---~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ---EFELVIGALPGF   88 (365)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---CCCEEEEecCCc
Confidence               689999988753

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.85  E-value=4.7e-05  Score=66.29  Aligned_cols=103  Identities=16%  Similarity=0.241  Sum_probs=69.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|+||..++..+...|++|+++++++++++.+ +++   +...   ..|.++.+..+.+.+ ... ...+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~---~~~~~~~~~~~~~~~-~~~-~~g~  218 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY---GAEY---LINASKEDILRQVLK-FTN-GKGV  218 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTTSCHHHHHHH-HTT-TSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCcE---EEeCCCchHHHHHHH-HhC-CCCc
Confidence            689999999999999999999999999999999988876643 333   3222   234444332222221 111 2369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      |++|+++|..                              .++.+++.+  +..|+++.++...
T Consensus       219 D~vid~~g~~------------------------------~~~~~~~~l--~~~G~iv~~G~~~  250 (334)
T 3qwb_A          219 DASFDSVGKD------------------------------TFEISLAAL--KRKGVFVSFGNAS  250 (334)
T ss_dssp             EEEEECCGGG------------------------------GHHHHHHHE--EEEEEEEECCCTT
T ss_pred             eEEEECCChH------------------------------HHHHHHHHh--ccCCEEEEEcCCC
Confidence            9999998841                              134445555  3468999987754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.85  E-value=2.9e-05  Score=67.47  Aligned_cols=104  Identities=14%  Similarity=0.203  Sum_probs=70.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|+||..++..+...|++|+++++++++.+.+. ++   +...   ..|.++.+..+.+.+ .. ....+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~---~~~~~~~~~~~~~~~-~~-~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWE---TIDYSHEDVAKRVLE-LT-DGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHH-HT-TTCCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCccHHHHHHH-Hh-CCCCc
Confidence            5899999999999999999999999999999999888766544 33   2222   235544333322222 11 11369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      |++|+++|..                              .++..++.+  +..|+++.++...+
T Consensus       211 Dvvid~~g~~------------------------------~~~~~~~~l--~~~G~iv~~g~~~~  243 (325)
T 3jyn_A          211 PVVYDGVGQD------------------------------TWLTSLDSV--APRGLVVSFGNASG  243 (325)
T ss_dssp             EEEEESSCGG------------------------------GHHHHHTTE--EEEEEEEECCCTTC
T ss_pred             eEEEECCChH------------------------------HHHHHHHHh--cCCCEEEEEecCCC
Confidence            9999998841                              133445555  34689999887543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.85  E-value=8.6e-05  Score=63.10  Aligned_cols=76  Identities=13%  Similarity=0.228  Sum_probs=58.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+.+...+ .+.....+  +   +       .  
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l-------~--  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---L-------K--  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---C-------C--
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---h-------c--
Confidence            3678999999998 6999999999999996 89999999999988888775432 34433221  1   1       0  


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                       ...|+|||+....
T Consensus       186 -~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 -QSYDVIINSTSAS  198 (281)
T ss_dssp             -SCEEEEEECSCCC
T ss_pred             -CCCCEEEEcCcCC
Confidence             3689999987653

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.84  E-value=6.1e-05  Score=63.73  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=58.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+..  ..+..+.  +.+   +.       + 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c-
Confidence            3678999999998 6999999999999996 899999999999988887743  2344332  211   11       1 


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                       ...|+|||+....
T Consensus       180 -~~~DivInaTp~g  192 (272)
T 3pwz_A          180 -QSFDIVVNATSAS  192 (272)
T ss_dssp             -CCCSEEEECSSGG
T ss_pred             -cCCCEEEECCCCC
Confidence             3689999987653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.82  E-value=4e-05  Score=59.07  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |..+..+++++|+|+ |.+|+.+++.|.+.|+.|++++|+++..+.+.+     ...+.++..|.++.+.+.+.      
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-----~~g~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-----EFSGFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-----TCCSEEEESCTTSHHHHHTT------
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-----cCCCcEEEecCCCHHHHHHc------
Confidence            445677899999996 999999999999999999999998877543210     12345677888886544321      


Q ss_pred             HcCCccEEEECCC
Q 040531           89 KHGRLDILFNNAG  101 (285)
Q Consensus        89 ~~~~id~lv~~ag  101 (285)
                      .....|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1235899999765

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.82  E-value=0.0001  Score=65.15  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+|+ |+||..++..+...|++|+++++++++.+.+.+++   +...   ..|..+.+.+.+       ..+.+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~---v~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADS---FLVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSE---EEETTCHHHHHH-------TTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCce---EEeccCHHHHHH-------hhCCC
Confidence            6899999996 99999999999999999999999888766554343   3221   236666543322       22579


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|.++|.
T Consensus       253 D~vid~~g~  261 (366)
T 1yqd_A          253 DGIIDTVSA  261 (366)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCc
Confidence            999999885

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.81  E-value=3.3e-05  Score=67.51  Aligned_cols=80  Identities=13%  Similarity=0.119  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+++||..++..+...|++|+++++++++.+.+.+ +   +....   +|.++.+..+.+.+ .. ....+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~~~~~-~~-~~~g~  214 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYETVME-LT-NGIGA  214 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHHHHHH-HT-TTSCE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHHHHHH-Hh-CCCCC
Confidence            68999999999999999999998999999999999888765543 3   32322   35544332222221 11 12369


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|+++|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999884

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.81  E-value=8.9e-05  Score=65.41  Aligned_cols=78  Identities=23%  Similarity=0.236  Sum_probs=57.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++++++|+|+ |++|++++..+...|++|++++|+.++++.+.+....   .+..   +..+.+++.+.+       .
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~-------~  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV-------A  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHH-------c
Confidence            477899999999 9999999999999999999999999887776554321   2222   223444443332       2


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      ..|++|++++..
T Consensus       230 ~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 EADLLIGAVLVP  241 (361)
T ss_dssp             TCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            689999998864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.78  E-value=0.00012  Score=66.53  Aligned_cols=84  Identities=13%  Similarity=0.209  Sum_probs=62.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEe--cc--------CCCHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH--CD--------VSLEQDIQNLI   83 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~--~D--------~s~~~~i~~~~   83 (285)
                      .|+++||+||+|+||...+..+...|++|+++++++++++.+ +++   +....+-.  .|        .++.++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence            689999999999999999999989999999999888776544 344   22222111  11        24566777777


Q ss_pred             HHHHHHcC--CccEEEECCC
Q 040531           84 NVTISKHG--RLDILFNNAG  101 (285)
Q Consensus        84 ~~i~~~~~--~id~lv~~ag  101 (285)
                      +.+.+..+  .+|++|.++|
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHhCCCCCcEEEEcCC
Confidence            77776543  7999999987

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.77  E-value=0.00011  Score=65.32  Aligned_cols=78  Identities=19%  Similarity=0.214  Sum_probs=59.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+++++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+   +..+.   .+.++.+++.+++.       
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l~-------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAVK-------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHHc-------
Confidence            689999999998 99999999999999999999999988876655433   22222   23445555554432       


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      ..|++|++++..
T Consensus       231 ~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 RADLVIGAVLVP  242 (377)
T ss_dssp             HCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            589999988753

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.76  E-value=0.00034  Score=60.10  Aligned_cols=144  Identities=12%  Similarity=0.020  Sum_probs=85.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEec--CchhhHHHHHHhhcC---CCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADI--DDAAGIALADSLLSS---SPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r--~~~~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++||||+|.+|.+++..|+..|.  .++++++  +.++++.....+...   ...+.+.. |  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            689999999999999999998874  5888998  766554333333221   22333322 2  111           1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc--------cC
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL--------MG  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~--------~~  161 (285)
                      +...|++|+.||.....       ..+.+   +.+..|+.....+++.+...   ...+.++++|.....        .+
T Consensus        68 ~~~aDvVi~~ag~~~~~-------g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SNPv~~~~~~~~~~~~  134 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-------GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTSNPVDLLNRHLYEAGD  134 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-------TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECCSSHHHHHHHHHHHSS
T ss_pred             hCCCCEEEEcCCCCCCC-------CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCChHHHHHHHHHHHcC
Confidence            34799999999974321       12333   45889998888888877553   234555554443322        12


Q ss_pred             CCCCccchh-hHHHHHHHHHHHHHHhC
Q 040531          162 GLGPHAYTV-SKHAIVGLTKNTACELG  187 (285)
Q Consensus       162 ~~~~~~Y~a-sKaa~~~l~~~la~e~~  187 (285)
                      .|.....+. +-.=...+-..+|..+.
T Consensus       135 ~p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          135 RSREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHeeecccchhHHHHHHHHHHHhC
Confidence            333334444 22224555556666654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.76  E-value=3.2e-05  Score=67.69  Aligned_cols=77  Identities=23%  Similarity=0.321  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc--C
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH--G   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~--~   91 (285)
                      .|+++||+||+|+||..++..+...|++|++++++.++.+.+. ++   +... ++  |..  +++.   +.+.+..  .
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~~-v~--~~~--~~~~---~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GADI-VL--PLE--EGWA---KAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE-EE--ESS--TTHH---HHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCcE-Ee--cCc--hhHH---HHHHHHhCCC
Confidence            6899999999999999999999999999999999888865443 33   2222 22  333  2222   2233332  2


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|+++|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999884

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.73  E-value=5.7e-05  Score=59.78  Aligned_cols=79  Identities=10%  Similarity=0.082  Sum_probs=58.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++.+++++|.| .|.+|+.+++.|.+. |+.|++++++++..+.+.+    .  .+.++.+|.++.+.+.++     ..
T Consensus        35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~--g~~~~~gd~~~~~~l~~~-----~~  102 (183)
T 3c85_A           35 INPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E--GRNVISGDATDPDFWERI-----LD  102 (183)
T ss_dssp             BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T--TCCEEECCTTCHHHHHTB-----CS
T ss_pred             cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C--CCCEEEcCCCCHHHHHhc-----cC
Confidence            356777889998 499999999999999 9999999999887655432    1  245677899987654432     01


Q ss_pred             cCCccEEEECCC
Q 040531           90 HGRLDILFNNAG  101 (285)
Q Consensus        90 ~~~id~lv~~ag  101 (285)
                      ....|.+|.+.+
T Consensus       103 ~~~ad~vi~~~~  114 (183)
T 3c85_A          103 TGHVKLVLLAMP  114 (183)
T ss_dssp             CCCCCEEEECCS
T ss_pred             CCCCCEEEEeCC
Confidence            246899998654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.66  E-value=0.00031  Score=53.00  Aligned_cols=77  Identities=12%  Similarity=0.032  Sum_probs=58.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++ +++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+      ..+.++.+|.++.+.+.++      ..
T Consensus         4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a------~i   69 (140)
T 3fwz_A            4 VDICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE------RGVRAVLGNAANEEIMQLA------HL   69 (140)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------TTCEEEESCTTSHHHHHHT------TG
T ss_pred             ccCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------cCCCEEECCCCCHHHHHhc------Cc
Confidence            44555 4667776 889999999999999999999999988766543      2467789999998876553      12


Q ss_pred             CCccEEEECCC
Q 040531           91 GRLDILFNNAG  101 (285)
Q Consensus        91 ~~id~lv~~ag  101 (285)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (140)
T 3fwz_A           70 ECAKWLILTIP   80 (140)
T ss_dssp             GGCSEEEECCS
T ss_pred             ccCCEEEEECC
Confidence            35888888654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.66  E-value=0.00095  Score=58.64  Aligned_cols=107  Identities=18%  Similarity=0.148  Sum_probs=72.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|+++||+|+ |++|...+......|++ |+++++++++.+.+. ++   ...+..+..|-.+.+++.+.+.++.. ...
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEESAKKIVESFG-GIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHHHHHHHHHHTS-SCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHHHHHHHHHHhC-CCC
Confidence            5899999998 99999999888889998 888998888766544 33   23445555665555555444333221 236


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      +|+++.++|..                             ..++.+++.+  +..|+++.++...
T Consensus       253 ~Dvvid~~g~~-----------------------------~~~~~~~~~l--~~~G~iv~~G~~~  286 (363)
T 3m6i_A          253 PAVALECTGVE-----------------------------SSIAAAIWAV--KFGGKVFVIGVGK  286 (363)
T ss_dssp             CSEEEECSCCH-----------------------------HHHHHHHHHS--CTTCEEEECCCCC
T ss_pred             CCEEEECCCCh-----------------------------HHHHHHHHHh--cCCCEEEEEccCC
Confidence            99999998731                             1244455656  4569999887643

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.61  E-value=4.9e-05  Score=65.28  Aligned_cols=92  Identities=15%  Similarity=0.224  Sum_probs=62.1

Q ss_pred             cCCCcE-EEEecCCC-----------------c-hhHHHHHHHHHCCCeEEEEecCchhhHH---------HHHHhhc--
Q 040531           12 TLEGKI-AIVTGGAR-----------------G-IGEATVRLFVKHGAKVVIADIDDAAGIA---------LADSLLS--   61 (285)
Q Consensus        12 ~l~~k~-vlItGas~-----------------g-IG~~ia~~la~~g~~v~~~~r~~~~~~~---------~~~~~~~--   61 (285)
                      +++||. ||||+|.+                 | .|.++|++++++|+.|+++++... +..         ..+.+..  
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhcccc
Confidence            578888 99998876                 6 999999999999999999988543 111         1111111  


Q ss_pred             -CCCceEEEeccCCCHHHHHHHHHHH------------------------------HHHcCCccEEEECCCCCC
Q 040531           62 -SSPLVTYLHCDVSLEQDIQNLINVT------------------------------ISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        62 -~~~~v~~~~~D~s~~~~i~~~~~~i------------------------------~~~~~~id~lv~~ag~~~  104 (285)
                       ....+..+.+|+...+++.+.+...                              .+.++..|++|.+|++..
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence             1123445666776666665555432                              234578999999999854

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.61  E-value=0.0037  Score=52.95  Aligned_cols=42  Identities=24%  Similarity=0.121  Sum_probs=36.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS   58 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~   58 (285)
                      +++.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            57777775 7899999999999999999999999887776654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.58  E-value=0.00023  Score=62.08  Aligned_cols=101  Identities=18%  Similarity=0.186  Sum_probs=69.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+|| |+||..++..+...|++|+.+++++++.+.+. ++   +...   .+|.++.+ +.+.+.++.   +.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---~~d~~~~~-~~~~~~~~~---~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL---GADL---VVNPLKED-AAKFMKEKV---GGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT---TCSE---EECTTTSC-HHHHHHHHH---SSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC---CCCE---EecCCCcc-HHHHHHHHh---CCC
Confidence            5899999999 88999999999999999999999888766543 33   3221   24666532 222222222   579


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      |++|+++|..                             ..++..++.++  ..|+++.+++..
T Consensus       232 d~vid~~g~~-----------------------------~~~~~~~~~l~--~~G~~v~~g~~~  264 (339)
T 1rjw_A          232 HAAVVTAVSK-----------------------------PAFQSAYNSIR--RGGACVLVGLPP  264 (339)
T ss_dssp             EEEEESSCCH-----------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CEEEECCCCH-----------------------------HHHHHHHHHhh--cCCEEEEecccC
Confidence            9999998731                             02455566663  468999887754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.56  E-value=0.00032  Score=61.37  Aligned_cols=78  Identities=15%  Similarity=0.202  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|+||..++..+...|++|+++++++++.+.+.+ +   +.. .+  .|..+  +..+.+.++  ..+.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~-~v--i~~~~--~~~~~~~~~--~~~g~  218 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GAD-IV--LNHKE--SLLNQFKTQ--GIELV  218 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCS-EE--ECTTS--CHHHHHHHH--TCCCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCc-EE--EECCc--cHHHHHHHh--CCCCc
Confidence            68999999999999999999999999999999998887655443 4   222 12  23332  222222222  23479


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++++++|.
T Consensus       219 Dvv~d~~g~  227 (346)
T 3fbg_A          219 DYVFCTFNT  227 (346)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCc
Confidence            999999873

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.56  E-value=0.0003  Score=58.72  Aligned_cols=82  Identities=18%  Similarity=0.338  Sum_probs=60.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------hhhHHHHHHhhcCCC--ceEE
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD-------------------AAGIALADSLLSSSP--LVTY   68 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~   68 (285)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..+  ++..
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  105 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP  105 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence            3578899999996 6999999999999997 799999887                   677777777765443  4566


Q ss_pred             EeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 040531           69 LHCDVSLEQDIQNLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        69 ~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag  101 (285)
                      +..++++ +.+.+++       ...|+||.+..
T Consensus       106 ~~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             ECSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             EeccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence            6666753 3443333       26899998754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.53  E-value=0.0002  Score=61.41  Aligned_cols=74  Identities=18%  Similarity=0.174  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+|++|+.++..+...|++|+.+++++++.+.+. ++   +... +  .|..+.++   +.+.+    +.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~~-~--~~~~~~~~---~~~~~----~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL---GAEE-A--ATYAEVPE---RAKAW----GGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT---TCSE-E--EEGGGHHH---HHHHT----TSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE-E--EECCcchh---HHHHh----cCc
Confidence            6899999999999999999999999999999999888876543 33   2221 1  35544122   22222    579


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|+ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 873

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.53  E-value=0.00025  Score=57.70  Aligned_cols=73  Identities=21%  Similarity=0.210  Sum_probs=58.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      .++|+|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+..     .+.++.+|.++.+.+.++      .....|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            4889996 89999999999999999999999988877655432     357899999998776643      12468988


Q ss_pred             EECCC
Q 040531           97 FNNAG  101 (285)
Q Consensus        97 v~~ag  101 (285)
                      |.+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            88654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.49  E-value=0.00047  Score=60.26  Aligned_cols=101  Identities=13%  Similarity=0.182  Sum_probs=68.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc--
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH--   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~--   90 (285)
                      .|+++||+|+ |+||..++..+...|+ +|+++++++++.+.+. ++   +.. .+  .|..+.+ +.   +.+.+..  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~-~~--~~~~~~~-~~---~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GAD-YV--INPFEED-VV---KEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCS-EE--ECTTTSC-HH---HHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCC-EE--ECCCCcC-HH---HHHHHHcCC
Confidence            7899999999 9999999999989999 8999999877765443 33   222 12  3554422 22   2233222  


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ..+|++|.++|..                             ..++.+++.++  ..|+++.+++..
T Consensus       235 ~g~D~vid~~g~~-----------------------------~~~~~~~~~l~--~~G~iv~~g~~~  270 (348)
T 2d8a_A          235 NGVDVFLEFSGAP-----------------------------KALEQGLQAVT--PAGRVSLLGLYP  270 (348)
T ss_dssp             SCEEEEEECSCCH-----------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CCCCEEEECCCCH-----------------------------HHHHHHHHHHh--cCCEEEEEccCC
Confidence            2699999998731                             12455566663  468999988754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.46  E-value=0.00029  Score=61.55  Aligned_cols=76  Identities=16%  Similarity=0.386  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+|+||..++..+...|++|+++ +++++++.+ .++   +...    +| .+. +..+.+.+... ...+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~-~~~~~~~~~~~-~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASR-EPEDYAAEHTA-GQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTS-CHHHHHHHHHT-TSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCC-CHHHHHHHHhc-CCCc
Confidence            68999999999999999999999999999988 777765433 334   3222    34 222 22222222221 2369


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.++|
T Consensus       218 D~vid~~g  225 (343)
T 3gaz_A          218 DLVYDTLG  225 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999987

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.45  E-value=7.3e-05  Score=56.82  Aligned_cols=71  Identities=17%  Similarity=0.200  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+++.+++.     ....  +..+.   .++++       ..
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~--~~~~~---~~~~~-------~~   81 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYV--LINDI---DSLIK-------NN   81 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEE--ECSCH---HHHHH-------TC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceE--eecCH---HHHhc-------CC
Confidence            3899999996 999999999999999999999999998887776652     1211  23332   22222       58


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|++.+.
T Consensus        82 Divi~at~~   90 (144)
T 3oj0_A           82 DVIITATSS   90 (144)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEEeCCC
Confidence            999998765

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.39  E-value=0.00075  Score=59.37  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+| +|++|...+..+...|++|+++++++++.+.+ +++   +... +  .| .+.+++.+.+.++.. ...+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~-~~~~~~~~~v~~~~~-g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADH-G--IN-RLEEDWVERVYALTG-DRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE-E--EE-TTTSCHHHHHHHHHT-TCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCE-E--Ec-CCcccHHHHHHHHhC-CCCc
Confidence            689999999 89999999999889999999999988876654 334   3222 2  24 332333333332221 2269


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.++|
T Consensus       259 D~vid~~g  266 (363)
T 3uog_A          259 DHILEIAG  266 (363)
T ss_dssp             EEEEEETT
T ss_pred             eEEEECCC
Confidence            99999988

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.39  E-value=0.0013  Score=58.15  Aligned_cols=78  Identities=15%  Similarity=0.190  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCC--CHHHHHHHHHHHHHHc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS--LEQDIQNLINVTISKH   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s--~~~~i~~~~~~i~~~~   90 (285)
                      .|+++||+| +|++|...+..+...| ++|+.+++++++.+.+. ++   +.. .++  |..  +.+++.+.   +.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~-~vi--~~~~~~~~~~~~~---v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI---GAD-LTL--NRRETSVEERRKA---IMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT---TCS-EEE--ETTTSCHHHHHHH---HHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc---CCc-EEE--eccccCcchHHHH---HHHHh
Confidence            589999999 8999999999888899 59999999888765443 33   322 222  433  23443333   33322


Q ss_pred             -C-CccEEEECCCC
Q 040531           91 -G-RLDILFNNAGV  102 (285)
Q Consensus        91 -~-~id~lv~~ag~  102 (285)
                       + .+|++|.++|.
T Consensus       264 ~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          264 HGRGADFILEATGD  277 (380)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCCcEEEECCCC
Confidence             2 69999999884

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.004  Score=54.41  Aligned_cols=80  Identities=19%  Similarity=0.122  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHH--Hc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTIS--KH   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~--~~   90 (285)
                      .|+++||+|+ |++|...+..+...|++|+++++++++.+.+. ++   +... +  .|.++ .+..+++.+ ...  ..
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~-~--~~~~~~~~~~~~i~~-~~~~~~g  238 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC---GADV-T--LVVDPAKEEESSIIE-RIRSAIG  238 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCSE-E--EECCTTTSCHHHHHH-HHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh---CCCE-E--EcCcccccHHHHHHH-HhccccC
Confidence            6899999997 89999999988889999999998887765443 33   3332 2  24432 222222221 111  02


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      +.+|++|+++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999873

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.34  E-value=0.005  Score=53.90  Aligned_cols=79  Identities=19%  Similarity=0.259  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCC--CHHHHHHHHHHHHHHc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS--LEQDIQNLINVTISKH   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s--~~~~i~~~~~~i~~~~   90 (285)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++   +.. .+  .|..  +.++..+.+.+...  
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~-~v--i~~~~~~~~~~~~~i~~~~~--  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GAD-LV--LQISKESPQEIARKVEGQLG--  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCS-EE--EECSSCCHHHHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCC-EE--EcCcccccchHHHHHHHHhC--
Confidence            5899999996 8999999988888999 8999998887765443 33   332 22  2444  22333222222222  


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      +.+|++|.++|.
T Consensus       241 ~g~D~vid~~g~  252 (356)
T 1pl8_A          241 CKPEVTIECTGA  252 (356)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.31  E-value=0.00061  Score=59.44  Aligned_cols=119  Identities=14%  Similarity=0.066  Sum_probs=74.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      -|+++.+.|+|++|.+|..++..++.+|.  .|+++|.+++.++.....+....   .++.+ .   ++   ..+.    
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~a----   73 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEA----   73 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHH----
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHH----
Confidence            35788999999999999999999999984  79999998887665554443211   12221 1   12   1111    


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCce-EEEEcccc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGC-IISTASVA  157 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~-ii~vss~~  157 (285)
                         ...-|++|.+||....     +  ..+   -.+.++.|+.-...+.+.+.+.-   ..+. ++++|...
T Consensus        74 ---l~dADvVvitaG~p~k-----p--G~~---R~dLl~~N~~I~~~i~~~i~~~~---p~a~~vlvvsNPv  129 (343)
T 3fi9_A           74 ---LTDAKYIVSSGGAPRK-----E--GMT---REDLLKGNAEIAAQLGKDIKSYC---PDCKHVIIIFNPA  129 (343)
T ss_dssp             ---HTTEEEEEECCC--------------C---HHHHHHHHHHHHHHHHHHHHHHC---TTCCEEEECSSSH
T ss_pred             ---hCCCCEEEEccCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHHhc---cCcEEEEEecCch
Confidence               2368999999996421     1  123   34557778776666666665542   3564 66666543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.30  E-value=0.0011  Score=58.41  Aligned_cols=79  Identities=16%  Similarity=0.240  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++   +.. .+  +|.++ .+++.+.+.++..  +
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~-~v--i~~~~~~~~~~~~~~~~~~--~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GAT-DF--VNPNDHSEPISQVLSKMTN--G  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCC-EE--ECGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---CCc-eE--EeccccchhHHHHHHHHhC--C
Confidence            5889999995 9999999998888999 7999998888766543 33   322 12  34432 1223333333322  4


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.30  E-value=0.00078  Score=59.54  Aligned_cols=76  Identities=18%  Similarity=0.215  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|+||..++..+...|++|+.++ ++++.+. .+++   +... +  +|..+.+..    +.+.+ .+.+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~-~~~l---Ga~~-v--~~~~~~~~~----~~~~~-~~g~  249 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL-VRKL---GADD-V--IDYKSGSVE----EQLKS-LKPF  249 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT---TCSE-E--EETTSSCHH----HHHHT-SCCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHH-HHHc---CCCE-E--EECCchHHH----HHHhh-cCCC
Confidence            689999999999999999998889999998888 4454433 3333   3332 2  244443222    22322 2579


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|.++|.
T Consensus       250 D~vid~~g~  258 (375)
T 2vn8_A          250 DFILDNVGG  258 (375)
T ss_dssp             SEEEESSCT
T ss_pred             CEEEECCCC
Confidence            999999884

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.28  E-value=9.6e-05  Score=62.65  Aligned_cols=45  Identities=11%  Similarity=0.114  Sum_probs=38.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALA   56 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~   56 (285)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            3578999999997 7999999999999998 8999999988765443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.0014  Score=57.92  Aligned_cols=74  Identities=22%  Similarity=0.276  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|.++||+|+ |++|...+..+...|++|+++++++++.+.+. ++   +...   ..|..+.+.+++    +.   +.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~---vi~~~~~~~~~~----~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADE---VVNSRNADEMAA----HL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE---EEETTCHHHHHT----TT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcE---EeccccHHHHHH----hh---cCC
Confidence            5899999998 88999999888889999999999888866544 34   2221   235555443322    21   479


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|.++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999884

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.24  E-value=0.0026  Score=54.84  Aligned_cols=116  Identities=16%  Similarity=0.160  Sum_probs=73.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCCC--ceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSSP--LVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+.|+||+|.+|..++..|++.|  ..|+++|+++  .+.....+.....  ++.....    ..+.++.       +..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a-------~~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG----PEQLPDC-------LKG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES----GGGHHHH-------HTT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC----CCCHHHH-------hCC
Confidence            58999999999999999999888  6899999987  2333334432211  2222210    0122222       237


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      .|++|+.+|.....       ..+..   +.+..|+.....+.+.+.+.-   ..++++++|-...
T Consensus        69 aDvVvi~ag~~~~~-------g~~r~---dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPRKP-------GMTRD---DLFNTNATIVATLTAACAQHC---PDAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCCCT-------TCCGG---GGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCC-------CCcHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCcc
Confidence            89999999975321       12222   246777777777777766643   4578888766544

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.23  E-value=0.00085  Score=60.01  Aligned_cols=73  Identities=19%  Similarity=0.374  Sum_probs=54.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.+++.+++   +..  .  .+..   ++.+.+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~~---~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRFD---ELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCGG---GHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecHH---hHHHHh-------
Confidence            578999999998 9999999999999998 8999999988876666655   222  1  2222   233322       


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      ...|+||.+.+.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            268999999764

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.22  E-value=0.0033  Score=54.38  Aligned_cols=120  Identities=14%  Similarity=0.118  Sum_probs=70.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .+.+++.+.|+|+ |.+|.+++..|+..|.  .++++|++++.++.....+....   ..+.....|             
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------------   70 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------------   70 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------------
Confidence            4567889999996 9999999999999986  79999999887776655554321   233333222             


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                       .+.+..-|++|..||....     +  .   +.-.+.++.|+.-...+.+.+.+.   ...+.+++++....
T Consensus        71 -~~a~~~aDiVvi~ag~~~k-----p--G---~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtNPvd  129 (326)
T 3vku_A           71 -YSDAKDADLVVITAGAPQK-----P--G---ETRLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD  129 (326)
T ss_dssp             -GGGGTTCSEEEECCCCC--------------------------CHHHHHHHHHTT---TCCSEEEECSSSHH
T ss_pred             -HHHhcCCCEEEECCCCCCC-----C--C---chHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEccCchH
Confidence             1223478999999996421     1  1   122345677776655556655442   24677777776443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.19  E-value=0.0026  Score=56.78  Aligned_cols=43  Identities=19%  Similarity=0.098  Sum_probs=38.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            478999999996 8999999999999999999999998887665

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.18  E-value=0.0019  Score=56.94  Aligned_cols=79  Identities=19%  Similarity=0.272  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|+++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ +++   +.. .+  .|.++ .+++.+.+.++..  +
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~-~v--i~~~~~~~~~~~~~~~~~~--~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV---GAT-EC--VNPQDYKKPIQEVLTEMSN--G  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCS-EE--ECGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCc-eE--ecccccchhHHHHHHHHhC--C
Confidence            5899999995 9999999998888999 799999888876554 333   322 12  24432 1223333333222  4


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.14  E-value=0.002  Score=56.74  Aligned_cols=79  Identities=20%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++   +... +  .|.++ .+++.+.+.++..  +
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~~~~~~~~v~~~~~--~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATE-C--INPQDFSKPIQEVLIEMTD--G  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSE-E--ECGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCce-E--eccccccccHHHHHHHHhC--C
Confidence            5889999996 9999999988888899 7999998888765543 44   2221 2  24332 1223333333222  4


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.13  E-value=0.0026  Score=54.10  Aligned_cols=90  Identities=17%  Similarity=0.346  Sum_probs=64.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc------------------hhhHHHHHHhhcCCC--ceEE
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD------------------AAGIALADSLLSSSP--LVTY   68 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~------------------~~~~~~~~~~~~~~~--~v~~   68 (285)
                      ...|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+.+.+.+.+.++  ++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            34578899999986 6899999999999994 588888765                  455566666655444  4667


Q ss_pred             EeccCCCHHHHHHHHHHHHHH----cCCccEEEECC
Q 040531           69 LHCDVSLEQDIQNLINVTISK----HGRLDILFNNA  100 (285)
Q Consensus        69 ~~~D~s~~~~i~~~~~~i~~~----~~~id~lv~~a  100 (285)
                      +..++++.+.++.+++.+...    ....|+||.+.
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            777888777777766544321    13689998764

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.13  E-value=0.0025  Score=56.24  Aligned_cols=79  Identities=19%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ .++   +... +  .|.++ .+++.+.+.++..  +
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-v--i~~~~~~~~~~~~v~~~~~--~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATD-C--LNPRELDKPVQDVITELTA--G  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSE-E--ECGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCcE-E--EccccccchHHHHHHHHhC--C
Confidence            5889999996 8999999988888999 799999888876544 333   3221 2  24332 1223333333322  4


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999873

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.11  E-value=0.0021  Score=54.03  Aligned_cols=66  Identities=15%  Similarity=0.150  Sum_probs=51.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. ++.     +...  ++.+.              ...|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~l--------------~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPPK--------------SAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCCS--------------SCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHHh--------------ccCC
Confidence            899999997 89999999999999999999999999988877 552     2222  22221              1589


Q ss_pred             EEEECCCCC
Q 040531           95 ILFNNAGVL  103 (285)
Q Consensus        95 ~lv~~ag~~  103 (285)
                      +|||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999987653

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.09  E-value=0.0084  Score=51.87  Aligned_cols=117  Identities=11%  Similarity=0.070  Sum_probs=76.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +.+.+.|+|+ |.+|.+++..|+..|.  .|+++|++++.++.....+...    ...+.....|.              
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--------------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--------------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--------------
Confidence            4568999996 9999999999999986  7999999988777655445332    12333332221              


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      +....-|++|..+|....     +  ..+.   .+.++.|+.-...+.+.+.+.   ...+.+++++....
T Consensus        69 ~a~~~aDvVvi~ag~p~k-----p--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQK-----P--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVD  126 (326)
T ss_dssp             GGGTTCSEEEECCSCCCC-----T--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred             HHhCCCCEEEEecccCCC-----C--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHH
Confidence            123468999999986421     1  2233   345777776666666666553   24577887776543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.08  E-value=0.0018  Score=56.37  Aligned_cols=76  Identities=21%  Similarity=0.219  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+|+ |++|...+..+...|++|+.+++++++.+.+ +++   +....   .|..+.+..+    .+.+..+.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~----~~~~~~g~~  233 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL---GAEVA---VNARDTDPAA----WLQKEIGGA  233 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT---TCSEE---EETTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EeCCCcCHHH----HHHHhCCCC
Confidence            6899999997 8999999998889999999999988876644 333   33322   3444433222    233334689


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |++|.++|
T Consensus       234 d~vid~~g  241 (340)
T 3s2e_A          234 HGVLVTAV  241 (340)
T ss_dssp             EEEEESSC
T ss_pred             CEEEEeCC
Confidence            99999877

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.07  E-value=0.0059  Score=51.48  Aligned_cols=170  Identities=12%  Similarity=0.016  Sum_probs=96.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEE-EEecCchhh--HHHH-------------HHhhcCCCceEEEeccCCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVK-HGAKVV-IADIDDAAG--IALA-------------DSLLSSSPLVTYLHCDVSL   75 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~-~g~~v~-~~~r~~~~~--~~~~-------------~~~~~~~~~v~~~~~D~s~   75 (285)
                      ++...++|+|++|.+|+.+++.+++ .+++++ +++++.+..  +...             +.+.+.-.++ =+.+|++.
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~-DvVIDft~   81 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTR   81 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCC-CEEEEcCC
Confidence            3446899999999999999999884 467766 556554321  0000             0010000112 23468999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH----------hh----hhhHHHHHHHHHHh
Q 040531           76 EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR----------IN----VRGAALGMKYAAKV  141 (285)
Q Consensus        76 ~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~----------~n----~~~~~~l~~~~~~~  141 (285)
                      ++.....+....+.  .+++++-..|+             +.++.+.+.+          .|    +.-.+.+++.+.+.
T Consensus        82 p~~~~~~~~~a~~~--G~~vVigTtG~-------------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~  146 (273)
T 1dih_A           82 PEGTLNHLAFCRQH--GKGMVIGTTGF-------------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKV  146 (273)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEECCCCC-------------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhC--CCCEEEECCCC-------------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHh
Confidence            99888887766655  57777777663             2222222221          11    11234455666666


Q ss_pred             hcCCCCceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHh---------------CCCCcEEEEEeCCCccc
Q 040531          142 MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL---------------GKYGIRVNCISPFGVAT  203 (285)
Q Consensus       142 ~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~---------------~~~~i~v~~v~pg~v~t  203 (285)
                      |...  -.|=.+   ..+...+-.++|+.++...+.+.+.+...+               .+.+|.+.++.-|-+-.
T Consensus       147 ~~~~--~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg  218 (273)
T 1dih_A          147 MGDY--TDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG  218 (273)
T ss_dssp             HTTT--SEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCE
T ss_pred             cCCC--CCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCc
Confidence            6311  111111   223344445678999988888876655422               13578999998665543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.05  E-value=0.0014  Score=57.06  Aligned_cols=118  Identities=16%  Similarity=0.126  Sum_probs=72.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--e-----EEEEecCc--hhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA--K-----VVIADIDD--AAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~--~-----v~~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      +.++||||+|.||.+++..|+..|.  .     ++++|+++  +.++-...++.... +-+.-+.  .++  ..      
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~------   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KE------   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CH------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--Cc------
Confidence            5799999999999999999998875  4     99999875  34444444443321 2221111  111  11      


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCc-eEEEEcccc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSG-CIISTASVA  157 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~ii~vss~~  157 (285)
                       .+.+...|++|+.||....     +  ..+.   .+.++.|+.....+.+.+...-   .++ +++++|...
T Consensus        74 -~~~~~daDvVvitAg~prk-----p--G~tR---~dll~~N~~i~~~i~~~i~~~~---~~~~~vivvsNPv  132 (333)
T 5mdh_A           74 -EIAFKDLDVAILVGSMPRR-----D--GMER---KDLLKANVKIFKCQGAALDKYA---KKSVKVIVVGNPA  132 (333)
T ss_dssp             -HHHTTTCSEEEECCSCCCC-----T--TCCT---TTTHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSH
T ss_pred             -HHHhCCCCEEEEeCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEcCCch
Confidence             1223478999999986422     1  1222   3457788877777777665542   245 577777644

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.05  E-value=0.00076  Score=58.81  Aligned_cols=100  Identities=14%  Similarity=0.162  Sum_probs=66.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|+++||+|| |++|..++..+...|+ +|+.+++++++.+.+.+ +    .. .  ..|..+. ++.+.+.++.  ...
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~-~--v~~~~~~-~~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----AD-R--LVNPLEE-DLLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CS-E--EECTTTS-CHHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HH-h--ccCcCcc-CHHHHHHHhc--CCC
Confidence            7899999999 9999999998888999 89999988776443221 1    11 1  2355442 2333333332  347


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      +|++|.++|..                             ..++..++.++  ..|+++.++..
T Consensus       232 ~D~vid~~g~~-----------------------------~~~~~~~~~l~--~~G~iv~~g~~  264 (343)
T 2dq4_A          232 VEVLLEFSGNE-----------------------------AAIHQGLMALI--PGGEARILGIP  264 (343)
T ss_dssp             EEEEEECSCCH-----------------------------HHHHHHHHHEE--EEEEEEECCCC
T ss_pred             CCEEEECCCCH-----------------------------HHHHHHHHHHh--cCCEEEEEecC
Confidence            99999998731                             12455566663  46899988764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.04  E-value=0.0013  Score=57.72  Aligned_cols=38  Identities=16%  Similarity=0.167  Sum_probs=33.1

Q ss_pred             CC-cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           14 EG-KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        14 ~~-k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .| .++||+||+|++|...+..+...|++|+++.++.+.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            57 999999999999999988887889999988876654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.03  E-value=0.00099  Score=54.72  Aligned_cols=72  Identities=11%  Similarity=0.133  Sum_probs=54.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.       ..+.++.+|.++.+.+.++      .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            457889997 8999999999999999 999999887765443       2377899999998766543      123678


Q ss_pred             EEEECCC
Q 040531           95 ILFNNAG  101 (285)
Q Consensus        95 ~lv~~ag  101 (285)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887643

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.02  E-value=0.027  Score=48.98  Aligned_cols=123  Identities=16%  Similarity=0.141  Sum_probs=70.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCch--hhHHHHHHhhcCC--CceEEEeccCCCHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDA--AGIALADSLLSSS--PLVTYLHCDVSLEQD   78 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~--~~v~~~~~D~s~~~~   78 (285)
                      +..++.-.|.|+||+|+||..++..|++...       .++++|.++.  .++-..-++....  .....+..  ++.. 
T Consensus        19 ~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~-   95 (345)
T 4h7p_A           19 PGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR-   95 (345)
T ss_dssp             ---CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH-
T ss_pred             CCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH-
Confidence            3456777999999999999999999997653       6889998653  2232222332211  11222222  1211 


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           79 IQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                               +.+..-|++|..||....       ..++.++   .++.|..=.-.+.+.+.++-  .+...++.+|..
T Consensus        96 ---------~a~~~advVvi~aG~prk-------pGmtR~D---Ll~~Na~I~~~~~~~i~~~a--~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 ---------VAFDGVAIAIMCGAFPRK-------AGMERKD---LLEMNARIFKEQGEAIAAVA--ASDCRVVVVGNP  152 (345)
T ss_dssp             ---------HHTTTCSEEEECCCCCCC-------TTCCHHH---HHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSS
T ss_pred             ---------HHhCCCCEEEECCCCCCC-------CCCCHHH---HHHHhHHHHHHHHHHHHhhc--cCceEEEEeCCC
Confidence                     224579999999997532       1245544   47777665555555544432  234556666643

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.00082  Score=58.18  Aligned_cols=77  Identities=19%  Similarity=0.145  Sum_probs=50.4

Q ss_pred             Cc-EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GK-IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k-~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++ ++||+||+|++|..++..+...|++|+.+++++++.+.+. ++   +... +  +|..+.+  .+.++++.  .+.+
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~-~--i~~~~~~--~~~~~~~~--~~~~  217 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---GAKE-V--LAREDVM--AERIRPLD--KQRW  217 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---TCSE-E--EECC-----------CC--SCCE
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc---CCcE-E--EecCCcH--HHHHHHhc--CCcc
Confidence            44 7999999999999999998899999999999877765443 33   3222 1  3444432  12222221  2469


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|.++|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999873

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.96  E-value=0.0033  Score=55.38  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|+++||+|+ |+||...+..+...|+ +|+.+++++++.+.+. ++   +... +  .|..+ .+++.+.+.++.  .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~-v--i~~~~~~~~~~~~i~~~t--~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GATE-C--LNPKDYDKPIYEVICEKT--NG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCSE-E--ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCcE-E--EecccccchHHHHHHHHh--CC
Confidence            5889999995 8999999988878898 7999998888765443 33   3221 2  23332 112222232222  24


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.91  E-value=0.001  Score=56.47  Aligned_cols=47  Identities=13%  Similarity=0.237  Sum_probs=40.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADS   58 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~   58 (285)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~  165 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE  165 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh
Confidence            3578999999997 6999999999999998 899999999887766543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.89  E-value=0.0046  Score=54.48  Aligned_cols=78  Identities=13%  Similarity=0.062  Sum_probs=52.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-cC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-HG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~~   91 (285)
                      -.|+++||+||+|++|...+..+...|++|+.+. ++++.+ ..+++   +... +  .|..+.+ +   .+.+.+. .+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l---Ga~~-v--i~~~~~~-~---~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR---GAEE-V--FDYRAPN-L---AQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT---TCSE-E--EETTSTT-H---HHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc---CCcE-E--EECCCch-H---HHHHHHHccC
Confidence            4689999999999999999999989999988886 555544 33443   3322 2  3444432 2   2223322 24


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      ++|+++.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999884

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.87  E-value=0.014  Score=50.26  Aligned_cols=117  Identities=19%  Similarity=0.198  Sum_probs=74.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC--chhhHHHHHHhhc------CCCceEEEeccCCCHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID--DAAGIALADSLLS------SSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~--~~~~~~~~~~~~~------~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      .++.+.+.|+|+ |.+|.+++..|+..|. .|++++++  ++..+.....+..      ...++..- -|.         
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d~---------   73 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SDY---------   73 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---------
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CCH---------
Confidence            346788999997 9999999999999998 99999998  4444433333221      11222221 111         


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                           +.+...|++|..+|....     +  ..+.   .+.++.|+.-...+.+.+...   ...+.++++|...
T Consensus        74 -----~a~~~aDvVIiaag~p~k-----p--g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPv  130 (315)
T 3tl2_A           74 -----ADTADSDVVVITAGIARK-----P--GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPV  130 (315)
T ss_dssp             -----GGGTTCSEEEECCSCCCC-----T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             -----HHhCCCCEEEEeCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChH
Confidence                 223579999999997422     1  2333   345777776666666666554   2457788777644

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.83  E-value=0.0027  Score=55.61  Aligned_cols=75  Identities=17%  Similarity=0.183  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++   +... +  .|..+.+.+.       +..+.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADD-Y--VIGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSC-E--EETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCce-e--eccccHHHHH-------HhcCCC
Confidence            6899999995 99999999888888999999999888765554333   3221 1  2445543322       222479


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|.++|.
T Consensus       246 D~vid~~g~  254 (357)
T 2cf5_A          246 DYVIDTVPV  254 (357)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999884

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.83  E-value=0.0025  Score=56.09  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-cC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVK-HGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-HG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~~   91 (285)
                      .|+++||+||+|++|...+..+.. .|++|+.+++++++.+.+. ++   +... +  .|..+  +.   .+.+.+. .+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l---Gad~-v--i~~~~--~~---~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL---GAHH-V--IDHSK--PL---AAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT---TCSE-E--ECTTS--CH---HHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc---CCCE-E--EeCCC--CH---HHHHHHhcCC
Confidence            588999999999999988766555 5899999999888765543 33   3332 2  24433  22   2233332 34


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|+++.++|.
T Consensus       239 g~Dvvid~~g~  249 (363)
T 4dvj_A          239 APAFVFSTTHT  249 (363)
T ss_dssp             CEEEEEECSCH
T ss_pred             CceEEEECCCc
Confidence            79999998873

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.0039  Score=54.63  Aligned_cols=78  Identities=15%  Similarity=0.184  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|+++||+|| |++|...+..+... |++|+.+++++++.+.+. ++   +... +  .|..+.  +.+.+.++.. ...
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~--~~~~v~~~~~-g~g  254 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---GADH-V--VDARRD--PVKQVMELTR-GRG  254 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---TCSE-E--EETTSC--HHHHHHHHTT-TCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---CCCE-E--Eeccch--HHHHHHHHhC-CCC
Confidence            6899999999 89999998888788 999999999888765443 33   3222 2  355443  3333332221 126


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (359)
T 1h2b_A          255 VNVAMDFVGS  264 (359)
T ss_dssp             EEEEEESSCC
T ss_pred             CcEEEECCCC
Confidence            9999999884

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.77  E-value=0.0058  Score=50.85  Aligned_cols=81  Identities=20%  Similarity=0.346  Sum_probs=56.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------hhhHHHHHHhhcCCC--ceEE
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD-------------------AAGIALADSLLSSSP--LVTY   68 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~   68 (285)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+..+  ++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3578899999998 6799999999999996 578876542                   455566666655444  4555


Q ss_pred             EeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 040531           69 LHCDVSLEQDIQNLINVTISKHGRLDILFNNA  100 (285)
Q Consensus        69 ~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~a  100 (285)
                      +..++++ +.+.++++       ..|+||.+.
T Consensus       103 ~~~~~~~-~~~~~~~~-------~~DvVi~~~  126 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA-------RADVVLDCT  126 (251)
T ss_dssp             ECSCCCH-HHHHHHHH-------HCSEEEECC
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEECC
Confidence            5555643 44444433       479999864

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.73  E-value=0.033  Score=48.23  Aligned_cols=119  Identities=11%  Similarity=0.050  Sum_probs=77.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC---CCceEEE-eccCCCHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS---SPLVTYL-HCDVSLEQDIQNLINV   85 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~v~~~-~~D~s~~~~i~~~~~~   85 (285)
                      ..+.+.+.|+|+ |.+|.+++..|+..|.  .|+++|++.+.++.....+...   ......+ ..|.   +        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~---~--------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY---S--------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG---G--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH---H--------
Confidence            467789999998 9999999999999986  7999999988777666555432   1111122 2221   1        


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                         ....-|++|..||....       ...+.+   +.++.|+.=...+.+.+.++   ...+.++++|....
T Consensus        84 ---~~~~aDiVvi~aG~~~k-------pG~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 ---VTANSKLVIITAGARQQ-------EGESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD  140 (331)
T ss_dssp             ---GGTTEEEEEECCSCCCC-------TTCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             ---HhCCCCEEEEccCCCCC-------CCccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence               23479999999997432       122333   35677776666666666554   34578888876543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.65  E-value=0.0012  Score=55.11  Aligned_cols=43  Identities=16%  Similarity=0.282  Sum_probs=36.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALA   56 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~   56 (285)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4678 8999987 8999999999999998 7999999988765543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.65  E-value=0.0045  Score=54.26  Aligned_cols=75  Identities=17%  Similarity=0.137  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+|+ |++|..++..+...|++|+.+++++++.+.+. ++   +... +  .|..+..+   +.+.+.   +.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~-v--~~~~~~~~---~~~~~~---~~~  244 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADH-Y--IATLEEGD---WGEKYF---DTF  244 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSE-E--EEGGGTSC---HHHHSC---SCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCCE-E--EcCcCchH---HHHHhh---cCC
Confidence            6899999999 99999999888889999999999888765543 34   2222 2  23332201   112222   579


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |++|.++|.
T Consensus       245 D~vid~~g~  253 (360)
T 1piw_A          245 DLIVVCASS  253 (360)
T ss_dssp             EEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999885

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.64  E-value=0.0033  Score=50.56  Aligned_cols=42  Identities=17%  Similarity=0.272  Sum_probs=37.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS   58 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~   58 (285)
                      +++|+||+|.+|.++++.|++.|++|++++|+.+..+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998877665543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.63  E-value=0.025  Score=48.89  Aligned_cols=117  Identities=17%  Similarity=0.144  Sum_probs=73.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcC------CCceEEEeccCCCHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSS------SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      |+.+.+.|+|+ |.+|.+++..|+..|. .|+++|++++.++....++...      ..++.. ..|.            
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d~------------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-ANDY------------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESSG------------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCCH------------
Confidence            55678999998 9999999999999998 9999999988765444333221      223322 1221            


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                        +.+..-|++|..+|....     +  ..+.   .+.+..|+.-...+.+.+...   ...+.+++++....
T Consensus        71 --~a~~~aDiVIiaag~p~k-----~--G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd  128 (324)
T 3gvi_A           71 --AAIEGADVVIVTAGVPRK-----P--GMSR---DDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLD  128 (324)
T ss_dssp             --GGGTTCSEEEECCSCCCC---------------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             --HHHCCCCEEEEccCcCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcH
Confidence              123468999999986422     1  1122   245666766665566665554   24577787776543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.62  E-value=0.0042  Score=54.07  Aligned_cols=101  Identities=16%  Similarity=0.119  Sum_probs=66.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+++||+|+ |++|...+..+...  |++|+.+++++++.+.+. ++   +... +  .|..+.   ...++++.+ ..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADY-V--SEMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSE-E--ECHHHH---HHHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCE-E--eccccc---hHHHHHhhc-CC
Confidence            7999999999 89999999888888  999999999888765443 34   2221 1  233220   122333332 23


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      .+|++|.++|..                             ..++.+++.++  ..|+++.++...
T Consensus       238 g~D~vid~~g~~-----------------------------~~~~~~~~~l~--~~G~iv~~g~~~  272 (344)
T 2h6e_A          238 GASIAIDLVGTE-----------------------------ETTYNLGKLLA--QEGAIILVGMEG  272 (344)
T ss_dssp             CEEEEEESSCCH-----------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CccEEEECCCCh-----------------------------HHHHHHHHHhh--cCCEEEEeCCCC
Confidence            799999998731                             12445556663  468999887643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.62  E-value=0.0041  Score=55.70  Aligned_cols=73  Identities=22%  Similarity=0.265  Sum_probs=54.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +..++|.|. |.+|+.+++.|.+.|..|++++++++..+.+.+.      .+.++.+|.++.+.+.++      .....|
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~a------gi~~A~   70 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESA------GAAKAE   70 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHT------TTTTCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhc------CCCccC
Confidence            346889987 7799999999999999999999999887665431      245677888887766544      112567


Q ss_pred             EEEECC
Q 040531           95 ILFNNA  100 (285)
Q Consensus        95 ~lv~~a  100 (285)
                      +||.+.
T Consensus        71 ~viv~~   76 (413)
T 3l9w_A           71 VLINAI   76 (413)
T ss_dssp             EEEECC
T ss_pred             EEEECC
Confidence            777654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.62  E-value=0.0035  Score=54.05  Aligned_cols=73  Identities=18%  Similarity=0.331  Sum_probs=50.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|+++||+||+|++|...+..+...|++|+.+++. ++ .+..+++   +... +  .|..+.+.+.       +....+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l---Ga~~-~--i~~~~~~~~~-------~~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL---GAEQ-C--INYHEEDFLL-------AISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH---TCSE-E--EETTTSCHHH-------HCCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc---CCCE-E--EeCCCcchhh-------hhccCC
Confidence            68999999999999999999999999999888753 33 3344444   3332 2  2444433121       112479


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.++|
T Consensus       217 D~v~d~~g  224 (321)
T 3tqh_A          217 DAVIDLVG  224 (321)
T ss_dssp             EEEEESSC
T ss_pred             CEEEECCC
Confidence            99999887

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.61  E-value=0.018  Score=50.65  Aligned_cols=84  Identities=17%  Similarity=0.140  Sum_probs=57.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccC-----------CCHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV-----------SLEQDIQN   81 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~-----------s~~~~i~~   81 (285)
                      +++++++|+|+ |.+|..+++.+...|++|++++|+.++++.+.+ +   +.+  ++..|+           ...+....
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga~--~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GAQ--WLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TCE--ECCCC-------------CHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEeccccccccccchhhhhHHHHhh
Confidence            58899999999 799999999999999999999999988776654 2   222  222221           00111222


Q ss_pred             HHHHHHHHcCCccEEEECCCCC
Q 040531           82 LINVTISKHGRLDILFNNAGVL  103 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~  103 (285)
                      -.+.+.+.....|++|.++.+.
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCT
T ss_pred             hHHHHHHHHhcCCEEEECCCCC
Confidence            3334455556899999987654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.61  E-value=0.035  Score=47.79  Aligned_cols=117  Identities=15%  Similarity=0.138  Sum_probs=71.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++.+.+.|+|| |.+|.+++..|+..|  ..++++|+++++++.....+..    .+..+.+. .|  +.          
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~----------   69 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EY----------   69 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CH----------
Confidence            45678999999 999999999999888  4799999988766644333321    11223322 22  21          


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                       +.+..-|++|..+|....     +  ..+..   +.+..|+.-...+.+.+.++   ...+.++++|...
T Consensus        70 -~a~~~aDvVvi~ag~~~~-----~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (317)
T 3d0o_A           70 -SDCHDADLVVICAGAAQK-----P--GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPV  126 (317)
T ss_dssp             -GGGTTCSEEEECCCCCCC-----T--TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             -HHhCCCCEEEECCCCCCC-----C--CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence             123479999999987432     1  12333   34556655555555555443   2457777765543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.59  E-value=0.0031  Score=54.99  Aligned_cols=69  Identities=20%  Similarity=0.266  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+|+ |++|...+..+...|++|+++++++++.+.+. ++   +....+     ++.+.+.+          .+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v~-----~~~~~~~~----------~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM---GVKHFY-----TDPKQCKE----------EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT---TCSEEE-----SSGGGCCS----------CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc---CCCeec-----CCHHHHhc----------CC
Confidence            6899999997 99999999988889999999999888866443 33   333222     23322211          69


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |+++.++|.
T Consensus       236 D~vid~~g~  244 (348)
T 3two_A          236 DFIISTIPT  244 (348)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCc
Confidence            999999884

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.58  E-value=0.038  Score=47.62  Aligned_cols=119  Identities=16%  Similarity=0.138  Sum_probs=75.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      |+.+.+.|+|+ |.+|.+++..|+..|. .|+++|++++.++.....+...    .....+...  .+.           
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~-----------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY-----------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH-----------
Confidence            45577889995 9999999999999987 8999999988776555445332    112222111  111           


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      +.+..-|++|..+|....     +  ..+..   +.+..|+.-...+.+.+...-   ..+.+++++....
T Consensus        69 ~a~~~aDvVIi~ag~p~k-----~--G~~R~---dl~~~N~~i~~~i~~~i~~~~---p~a~vivvtNPvd  126 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRK-----P--GMSRD---DLLGINIKVMQTVGEGIKHNC---PNAFVICITNPLD  126 (321)
T ss_dssp             GGGTTCSEEEECCSCCCC-----T--TCCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSHH
T ss_pred             HHHCCCCEEEEcCCcCCC-----C--CCCHH---HHHHHhHHHHHHHHHHHHHHC---CCcEEEEecCchH
Confidence            123468999999986422     1  22333   456667766666666665542   4577777765443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.56  E-value=0.0032  Score=53.11  Aligned_cols=39  Identities=28%  Similarity=0.512  Sum_probs=36.0

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            478999999999999999999999999999999998754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.56  E-value=0.0036  Score=54.79  Aligned_cols=100  Identities=15%  Similarity=0.204  Sum_probs=65.0

Q ss_pred             CCCcEEEEecCCCchhHHH-HHHH-HHCCCe-EEEEecCch---hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEAT-VRLF-VKHGAK-VVIADIDDA---AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~i-a~~l-a~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ++++++||+|| |++|... +..+ ...|++ |+.++++++   +.+.+ +++   +.  ..+  |..+. ++.+ +.++
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---Ga--~~v--~~~~~-~~~~-i~~~  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---DA--TYV--DSRQT-PVED-VPDV  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---TC--EEE--ETTTS-CGGG-HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---CC--ccc--CCCcc-CHHH-HHHh
Confidence            34499999999 9999999 7666 567998 999999877   65443 333   22  222  55442 2223 3333


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                         .+.+|++|.++|..              .               .++.++..++  ..|+++.++...
T Consensus       240 ---~gg~Dvvid~~g~~--------------~---------------~~~~~~~~l~--~~G~iv~~g~~~  276 (357)
T 2b5w_A          240 ---YEQMDFIYEATGFP--------------K---------------HAIQSVQALA--PNGVGALLGVPS  276 (357)
T ss_dssp             ---SCCEEEEEECSCCH--------------H---------------HHHHHHHHEE--EEEEEEECCCCC
T ss_pred             ---CCCCCEEEECCCCh--------------H---------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence               24799999998731              0               2344555563  468999887754

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.56  E-value=0.0035  Score=55.25  Aligned_cols=101  Identities=22%  Similarity=0.315  Sum_probs=66.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH----
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS----   88 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~----   88 (285)
                      .|+++||+|+ |++|...+..+...|+ .|+++++++++.+ ..+++   +...   ..|.++.+-    .+.+.+    
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~---vi~~~~~~~----~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GATA---TVDPSAGDV----VEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCSE---EECTTSSCH----HHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCCE---EECCCCcCH----HHHHHhhhhc
Confidence            5899999998 8999999988888999 7888888877755 33444   2221   235444322    222332    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ..+.+|+++.++|..                             ..++.++..++  ..|+++.++...
T Consensus       250 ~~gg~Dvvid~~G~~-----------------------------~~~~~~~~~l~--~~G~vv~~G~~~  287 (370)
T 4ej6_A          250 VPGGVDVVIECAGVA-----------------------------ETVKQSTRLAK--AGGTVVILGVLP  287 (370)
T ss_dssp             STTCEEEEEECSCCH-----------------------------HHHHHHHHHEE--EEEEEEECSCCC
T ss_pred             cCCCCCEEEECCCCH-----------------------------HHHHHHHHHhc--cCCEEEEEeccC
Confidence            124799999988731                             12445566663  468999887654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.55  E-value=0.0045  Score=54.72  Aligned_cols=81  Identities=21%  Similarity=0.315  Sum_probs=54.5

Q ss_pred             CCCcEEEEec-CCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTG-GARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItG-as~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -+|.++||.| |+|++|...+..+...|++|+.+++++++.+.+. ++   +....   .|..+.+-.++ +.++... .
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~~---~~~~~~~~~~~-v~~~t~~-~  239 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ---GAVHV---CNAASPTFMQD-LTEALVS-T  239 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT---TCSCE---EETTSTTHHHH-HHHHHHH-H
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC---CCcEE---EeCCChHHHHH-HHHHhcC-C
Confidence            3688899997 9999999999888889999999999888765443 33   33322   24444322222 2222222 2


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|+++.++|.
T Consensus       240 g~d~v~d~~g~  250 (379)
T 3iup_A          240 GATIAFDATGG  250 (379)
T ss_dssp             CCCEEEESCEE
T ss_pred             CceEEEECCCc
Confidence            69999999885

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.53  E-value=0.0063  Score=53.94  Aligned_cols=44  Identities=20%  Similarity=0.184  Sum_probs=39.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      .+.+++++|+|+ |++|+.+++.+...|++|++++++..+.+...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            578999999996 89999999999999999999999988766554

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.50  E-value=0.014  Score=48.65  Aligned_cols=91  Identities=11%  Similarity=0.277  Sum_probs=58.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhh--------cCCCceEEEeccCCCHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLL--------SSSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~--------~~~~~v~~~~~D~s~~~~i~~   81 (285)
                      ..++++++.|.|+ |.+|..++..|++.|++ |.+++|+++..+.+.+.+.        +.-.+..++..-+. ...+..
T Consensus         6 ~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~   83 (266)
T 3d1l_A            6 RSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAE   83 (266)
T ss_dssp             -CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHH
T ss_pred             cCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHH
Confidence            3445567889997 89999999999999998 8899999888777665421        10111222222222 345677


Q ss_pred             HHHHHHHHcCCccEEEECCCCC
Q 040531           82 LINVTISKHGRLDILFNNAGVL  103 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~  103 (285)
                      +++++.+...+=.++|++.+..
T Consensus        84 v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHhhcCCCcEEEECCCCC
Confidence            7776655443345677776543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.47  E-value=0.0023  Score=56.55  Aligned_cols=79  Identities=20%  Similarity=0.213  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCC-HHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL-EQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~-~~~i~~~~~~i~~~~~   91 (285)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++++++.+ +++   +... +  .|..+ .+++.+.+.++.  .+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-v--i~~~~~~~~~~~~i~~~~--~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF---GVNE-F--VNPKDHDKPIQEVIVDLT--DG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT---TCCE-E--ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCcE-E--EccccCchhHHHHHHHhc--CC
Confidence            5889999998 9999999988888899 799999988886643 333   3222 2  23331 122333333222  23


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.46  E-value=0.0077  Score=53.65  Aligned_cols=77  Identities=21%  Similarity=0.310  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc--
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH--   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~--   90 (285)
                      .|.++||+|+ |++|...+..+...|+ .|+.+++++++.+.+ +++   +... +  .|..+.+-    .+.+.+..  
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~~~~~~~----~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADH-V--IDPTKENF----VEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSE-E--ECTTTSCH----HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCE-E--EcCCCCCH----HHHHHHHhCC
Confidence            6889999998 8999999988888999 799999888776543 444   3222 2  24443322    22233322  


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      ..+|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999999884

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.46  E-value=0.015  Score=50.06  Aligned_cols=115  Identities=15%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCC---ceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSP---LVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.+.|+|+ |.+|..++..|+..|.  .|+++|.++++++.....+.....   .+.+. .  .+           .+.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHH
Confidence            457888998 9999999999999987  899999998776655555533211   22111 1  11           112


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      +..-|++|..+|....     +  ..+.   .+.+..|+.-...+.+.+.+.   ...+.+++++...
T Consensus        72 ~~~aDvVii~~g~p~k-----~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRK-----P--GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPV  126 (318)
T ss_dssp             GTTCSEEEECCCC-------------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSH
T ss_pred             hCCCCEEEEcCCCCCC-----C--CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence            3579999999986421     1  1232   245677777666667766665   3467777765443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.46  E-value=0.16  Score=42.51  Aligned_cols=78  Identities=10%  Similarity=0.167  Sum_probs=54.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC-CCeEEE-EecCch---------------------hhHHHHHHhhcCCCceEEEec
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKH-GAKVVI-ADIDDA---------------------AGIALADSLLSSSPLVTYLHC   71 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~-g~~v~~-~~r~~~---------------------~~~~~~~~~~~~~~~v~~~~~   71 (285)
                      -..+.|+||+|.+|+.+++.+.+. +.+++. ++|+.+                     .++++.+     ..+   +..
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~-----~~D---VVI   78 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA-----EAD---YLI   78 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH-----HCS---EEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc-----CCC---EEE
Confidence            357999999999999999999865 566655 466532                     1122221     112   357


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 040531           72 DVSLEQDIQNLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        72 D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~  102 (285)
                      |+|.++.....+....+.  .+++|+-+.|+
T Consensus        79 DfT~p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           79 DFTLPEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             ECSCHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             EcCCHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            899999988888777666  58888888774

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.45  E-value=0.0041  Score=54.48  Aligned_cols=37  Identities=19%  Similarity=0.357  Sum_probs=31.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .|.++||+||+|++|...+..+...|++++++.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            6899999999999999998887788999887776543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.41  E-value=0.0059  Score=53.64  Aligned_cols=47  Identities=30%  Similarity=0.374  Sum_probs=42.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      +++||+++|+|. |.+|+.+|+.|.+.|++|++.+++.+++++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            699999999997 78999999999999999999999988877776654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.41  E-value=0.014  Score=50.68  Aligned_cols=61  Identities=18%  Similarity=0.263  Sum_probs=43.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCc-------------------hhhHHHHHHhhcCCCc--eEEE
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDD-------------------AAGIALADSLLSSSPL--VTYL   69 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~-------------------~~~~~~~~~~~~~~~~--v~~~   69 (285)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.++|++.                   .+.+.+.+.+.+..+.  +..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            468899999987 68999999999999965 88887643                   3455566666554544  4444


Q ss_pred             eccC
Q 040531           70 HCDV   73 (285)
Q Consensus        70 ~~D~   73 (285)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            4443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.38  E-value=0.0031  Score=54.24  Aligned_cols=82  Identities=18%  Similarity=0.164  Sum_probs=56.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceE-EEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT-YLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~-~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++|++++|.|++.-+|+.+|+.|+..|++|.+++|+..+.....+.+.   .+.+ ...+..++++++.+.+.      
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~------  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSL------  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhc------
Confidence            7899999999999889999999999999999999987544332222221   1111 11112244466666554      


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                       .-|+||..+|..
T Consensus       245 -~ADIVIsAtg~p  256 (320)
T 1edz_A          245 -DSDVVITGVPSE  256 (320)
T ss_dssp             -HCSEEEECCCCT
T ss_pred             -cCCEEEECCCCC
Confidence             589999998863

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.36  E-value=0.0064  Score=55.25  Aligned_cols=74  Identities=16%  Similarity=0.158  Sum_probs=58.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+.++|.|+ |.+|+.+|+.|.++|+.|++++++++.++.+.+.+     .+.++.+|-++++.++++=      -..-|
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Ag------i~~ad   70 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAG------AQDAD   70 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHT------TTTCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcC------CCcCC
Confidence            356888887 57899999999999999999999999988776654     4678889999988876651      12567


Q ss_pred             EEEECC
Q 040531           95 ILFNNA  100 (285)
Q Consensus        95 ~lv~~a  100 (285)
                      .+|...
T Consensus        71 ~~ia~t   76 (461)
T 4g65_A           71 MLVAVT   76 (461)
T ss_dssp             EEEECC
T ss_pred             EEEEEc
Confidence            777643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.34  E-value=0.05  Score=46.25  Aligned_cols=115  Identities=10%  Similarity=0.028  Sum_probs=69.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+.|+|+ |.+|.+++..|++.|.  .|++.+++++.++...-++..    ......+...  +|.+           ..
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence            5889999 9999999999999997  899999998876533222211    1111222211  1211           12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      ..-|++|..+|....       ...+..   +.++.|+.-...+.+.+.+.   ...+.++++|....
T Consensus        68 ~~aDiVViaag~~~k-------pG~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~iivvsNPvd  122 (294)
T 1oju_A           68 KGSEIIVVTAGLARK-------PGMTRL---DLAHKNAGIIKDIAKKIVEN---APESKILVVTNPMD  122 (294)
T ss_dssp             TTCSEEEECCCCCCC-------SSCCHH---HHHHHHHHHHHHHHHHHHTT---STTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCC-------CCCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcch
Confidence            468999999987421       123443   34666655444444444332   24577777776443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.33  E-value=0.018  Score=48.65  Aligned_cols=42  Identities=14%  Similarity=0.195  Sum_probs=37.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD   57 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~   57 (285)
                      +++.|.|++|.+|.++++.|++.|++|++++|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999999887666543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.33  E-value=0.018  Score=51.11  Aligned_cols=44  Identities=23%  Similarity=0.214  Sum_probs=39.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD   57 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~   57 (285)
                      +++.+++|+|+ |.+|..+++.+...|++|++++++..+++.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            67899999999 799999999999999999999999988766544

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.31  E-value=0.015  Score=51.16  Aligned_cols=77  Identities=12%  Similarity=0.158  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-cC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-HG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~~   91 (285)
                      .|+++||+|+ |++|...+..+...|+ .|+.+++++++.+.+ +++   +... ++  |..+.+ +   .+.+.+. .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-vi--~~~~~~-~---~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATH-VI--NSKTQD-P---VAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSE-EE--ETTTSC-H---HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCE-Ee--cCCccC-H---HHHHHHhcCC
Confidence            5889999995 8999999988878898 588999888776544 344   2222 22  333322 1   2222222 23


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus       258 g~D~vid~~g~  268 (371)
T 1f8f_A          258 GVNFALESTGS  268 (371)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.29  E-value=0.0064  Score=51.24  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=35.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++||+++|.|+++-+|+.++..|++.|++|.++.++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            478999999999999999999999999999999987654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.27  E-value=0.092  Score=44.99  Aligned_cols=115  Identities=20%  Similarity=0.206  Sum_probs=71.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-C--CeEEEEecCchhhHHHHHHhhcCCCceEEEe-ccCCCHHHHHHHHHHHHHHcCC
Q 040531           17 IAIVTGGARGIGEATVRLFVKH-G--AKVVIADIDDAAGIALADSLLSSSPLVTYLH-CDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~-g--~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~-~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+.|+||+|.+|.+++..|++. +  ..++++|+++ ..+-..-++........+.. ..-.+.+           .+..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~-----------~~~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP-----------ALEG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHH-----------HHTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHH-----------HhCC
Confidence            5889999999999999999875 4  5699999987 33333333432222222211 1111112           2247


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      .|++|..||....       ...+.   .+.++.|+.-...+.+.+.+.   ...+.+++++..
T Consensus        70 aDivii~ag~~rk-------pG~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           70 ADVVLISAGVARK-------PGMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             CSEEEECCSCSCC-------TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCEEEEeCCCCCC-------CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            9999999997421       12333   455777877776677776664   245778877654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.24  E-value=0.011  Score=52.52  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|+++||+|+ |++|...+..+...|+ .|+.+++++++++.+ +++   +..  .  +|.++.+.+.+.+.++.. ...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~--~--i~~~~~~~~~~~v~~~t~-g~g  254 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---GFE--I--ADLSLDTPLHEQIAALLG-EPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCE--E--EETTSSSCHHHHHHHHHS-SSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---CCc--E--EccCCcchHHHHHHHHhC-CCC
Confidence            6899999995 9999999888778898 688889888876544 333   332  2  344433222222222211 126


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (398)
T 1kol_A          255 VDCAVDAVGF  264 (398)
T ss_dssp             EEEEEECCCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.23  E-value=0.0086  Score=51.96  Aligned_cols=80  Identities=18%  Similarity=0.041  Sum_probs=54.1

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhc------CCCceEEEeccCCCHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLS------SSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~s~~~~i~~   81 (285)
                      ++|.-+.+.+.|+|| |.+|.+++..|+..|. +|++.+++++.++.....+..      ...++...    +|.+   +
T Consensus         3 ~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---e   74 (331)
T 1pzg_A            3 PALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---A   74 (331)
T ss_dssp             CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---H
T ss_pred             cCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---H
Confidence            344445568999998 9999999999999997 999999998877664333321      11223221    2322   1


Q ss_pred             HHHHHHHHcCCccEEEECCCCC
Q 040531           82 LINVTISKHGRLDILFNNAGVL  103 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~  103 (285)
                      .       ...-|++|..+|..
T Consensus        75 a-------~~~aDiVi~a~g~p   89 (331)
T 1pzg_A           75 A-------LTGADCVIVTAGLT   89 (331)
T ss_dssp             H-------HTTCSEEEECCSCS
T ss_pred             H-------hCCCCEEEEccCCC
Confidence            1       23689999999864

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.20  E-value=0.062  Score=46.45  Aligned_cols=80  Identities=24%  Similarity=0.260  Sum_probs=51.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeE-EEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKV-VIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v-~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -.|++++|+|+ |++|...+..+...|+.+ +.+++++++++. ++++   +... ++  |.++.+ ..+..+.+ ....
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~l---Ga~~-~i--~~~~~~-~~~~~~~~-~~~~  228 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSF---GAMQ-TF--NSSEMS-APQMQSVL-RELR  228 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT---TCSE-EE--ETTTSC-HHHHHHHH-GGGC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHc---CCeE-EE--eCCCCC-HHHHHHhh-cccC
Confidence            46899999987 899999998888899875 667777776543 3333   3332 22  333322 22223322 2345


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      ..|+++.++|.
T Consensus       229 g~d~v~d~~G~  239 (346)
T 4a2c_A          229 FNQLILETAGV  239 (346)
T ss_dssp             SSEEEEECSCS
T ss_pred             Ccccccccccc
Confidence            68999998873

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.20  E-value=0.0085  Score=50.23  Aligned_cols=37  Identities=5%  Similarity=0.151  Sum_probs=34.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      ++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            8999999999999999999999999999999998643

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.19  E-value=0.017  Score=51.71  Aligned_cols=75  Identities=17%  Similarity=0.165  Sum_probs=55.2

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+++.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....   .+   .  -..+..|..|.+.+.++++   
T Consensus        28 ~~~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~---a--d~~~~~~~~d~~~l~~~a~---   95 (419)
T 4e4t_A           28 SVSPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG---AV---A--DRHLRAAYDDEAALAELAG---   95 (419)
T ss_dssp             -CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH---HH---S--SEEECCCTTCHHHHHHHHH---
T ss_pred             ccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh---hh---C--CEEEECCcCCHHHHHHHHh---
Confidence            3345679999999986 479999999999999999999876543221   11   1  1345689999988877763   


Q ss_pred             HHcCCccEEEE
Q 040531           88 SKHGRLDILFN   98 (285)
Q Consensus        88 ~~~~~id~lv~   98 (285)
                          .+|+|+.
T Consensus        96 ----~~D~V~~  102 (419)
T 4e4t_A           96 ----LCEAVST  102 (419)
T ss_dssp             ----HCSEEEE
T ss_pred             ----cCCEEEE
Confidence                4888874

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.19  E-value=0.01  Score=53.75  Aligned_cols=79  Identities=27%  Similarity=0.262  Sum_probs=53.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ++++++|.++|.|. |+.|.++|+.|+++|+.|.+.|++........+.+.+.+.+  +....-.  +.          .
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~--~~~g~~~--~~----------~   68 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIK--VVCGSHP--LE----------L   68 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCE--EEESCCC--GG----------G
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCE--EEECCCh--HH----------h
Confidence            45789999999999 78899999999999999999998764322333444443333  3322211  10          1


Q ss_pred             cCC-ccEEEECCCCC
Q 040531           90 HGR-LDILFNNAGVL  103 (285)
Q Consensus        90 ~~~-id~lv~~ag~~  103 (285)
                      ... .|.||...|+.
T Consensus        69 ~~~~~d~vv~spgi~   83 (451)
T 3lk7_A           69 LDEDFCYMIKNPGIP   83 (451)
T ss_dssp             GGSCEEEEEECTTSC
T ss_pred             hcCCCCEEEECCcCC
Confidence            123 89999988874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.17  E-value=0.02  Score=50.76  Aligned_cols=79  Identities=15%  Similarity=0.187  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++++.+. ++   +.  .+  +|..+.+.+.+.+.++.. ...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga--~~--i~~~~~~~~~~~~~~~~~-g~g  254 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA---GF--ET--IDLRNSAPLRDQIDQILG-KPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT---TC--EE--EETTSSSCHHHHHHHHHS-SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc---CC--cE--EcCCCcchHHHHHHHHhC-CCC
Confidence            6899999997 9999999888778899 8999999888765432 33   33  22  344432211111222211 126


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            9999999885

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.17  E-value=0.0091  Score=50.71  Aligned_cols=40  Identities=28%  Similarity=0.410  Sum_probs=36.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+++||+++|.|+++-+|+.++..|++.|++|.++.|+..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            4789999999999999999999999999999999987543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.14  E-value=0.0077  Score=50.76  Aligned_cols=38  Identities=24%  Similarity=0.331  Sum_probs=35.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID   48 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~   48 (285)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            47899999999999999999999999999999998764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.13  E-value=0.094  Score=45.27  Aligned_cols=116  Identities=13%  Similarity=0.049  Sum_probs=73.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC-----CCceEEEeccCCCHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS-----SPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~-----~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      ..+.+.|+|+ |.+|.+++..|+..|.  .|+++|++++.++.....+...     ..++ ....|..+           
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i-~~t~d~~~-----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKI-VSGKDYSV-----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEE-EEESSSCS-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeE-EEcCCHHH-----------
Confidence            4678999999 9999999999999996  7999999988776655444321     1122 12234321           


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                         +..-|++|..||.....       ..+.+   +.+..|+.-.-.+.+.+.+.   ...+.++++|....
T Consensus        87 ---~~daDiVIitaG~p~kp-------G~tR~---dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQE-------GESRL---NLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELGT  142 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCS-------SCCTT---GGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             ---hCCCCEEEEeCCCCCCC-------CCCHH---HHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCccH
Confidence               34689999999975321       12222   23455554444455555444   34677887776543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.13  E-value=0.016  Score=47.98  Aligned_cols=77  Identities=13%  Similarity=0.116  Sum_probs=55.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      .++|.|++|.+|+.+++.+.+. ++.++.+..+.+.+.++..    ...+   +..|+|.++.....+....+.  .+++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~   72 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHA   72 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCCE
Confidence            5899999999999999999866 8887765544444443332    1222   557999999888887765554  5888


Q ss_pred             EEECCCC
Q 040531           96 LFNNAGV  102 (285)
Q Consensus        96 lv~~ag~  102 (285)
                      |+...|+
T Consensus        73 VigTTG~   79 (245)
T 1p9l_A           73 VVGTTGF   79 (245)
T ss_dssp             EECCCCC
T ss_pred             EEcCCCC
Confidence            8888774

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.10  E-value=0.025  Score=48.36  Aligned_cols=112  Identities=13%  Similarity=0.112  Sum_probs=65.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+.|+|| |.+|..++..|+..|.  .|++++++++.++.....+....   ....+..   ++.+           ...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------HhC
Confidence            6889998 9999999999999998  89999999877665444443221   1122211   1211           134


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ..|++|.+++.....       ..+   -.+.+..|+.-...+++.+.+.   ...+.+++++-.
T Consensus        67 ~aDvVIi~~~~~~~~-------g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP  118 (304)
T 2v6b_A           67 DAQVVILTAGANQKP-------GES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTSNP  118 (304)
T ss_dssp             TCSEEEECC----------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSS
T ss_pred             CCCEEEEcCCCCCCC-------CCc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence            689999999864211       111   1234556665555556666554   234666665543

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.10  E-value=0.096  Score=45.20  Aligned_cols=117  Identities=14%  Similarity=0.097  Sum_probs=74.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.+.+.|+|| |.+|.+++..|+..+.  .++++|++.++++.....+....   ..+.+.. |  +.+           
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~-----------   72 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS-----------   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------
Confidence            4568999999 9999999999998885  79999999888776555553321   2233322 2  111           


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      .+..-|++|..+|....     +  ..+.+   +.+..|+.-...+.+.+.++   ...+.+++++-...
T Consensus        73 a~~~aDvVii~ag~~~k-----~--g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQK-----P--GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD  129 (326)
T ss_dssp             GGGGCSEEEECCCCC------------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHH
T ss_pred             HhCCCCEEEEcCCCCCC-----C--CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHH
Confidence            13468999999987421     1  12333   34666666665566665554   24678888765443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.08  E-value=0.012  Score=50.29  Aligned_cols=44  Identities=25%  Similarity=0.262  Sum_probs=38.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .++++++++|.|+ |+||+++++.+...|++|++++|+.++.+..
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~  196 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI  196 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            4789999999996 8999999999999999999999988765443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.06  E-value=0.078  Score=45.59  Aligned_cols=115  Identities=14%  Similarity=0.121  Sum_probs=70.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +.+.|+|| |.+|.+++..|+..+.  .++++|+++++++.....+....   ..+.+.. |  +           .+.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----------~~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----------YSDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHHh
Confidence            57999998 9999999999998885  79999999888776555553321   2233222 2  1           1223


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      ..-|++|..+|....     +  ..+.   .+.+..|+.-...+.+.+.++   ...+.+++++-...
T Consensus        71 ~~aDvVii~ag~~~~-----~--g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           71 KDADLVVITAGAPQK-----P--GESR---LDLVNKNLNILSSIVKPVVDS---GFDGIFLVAANPVD  125 (318)
T ss_dssp             TTCSEEEECCCC--------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeCCcHH
Confidence            579999999987422     1  1121   234555655555555555443   34677887765443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.03  E-value=0.0049  Score=52.00  Aligned_cols=45  Identities=31%  Similarity=0.431  Sum_probs=39.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD   57 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~   57 (285)
                      ++++++++|.|+ |++|++++..|++.|++|.+++|+.++.+++.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~  170 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ  170 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            578999999996 799999999999999999999999877665544

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.03  E-value=0.03  Score=48.54  Aligned_cols=102  Identities=19%  Similarity=0.234  Sum_probs=64.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|.+++|+|+ |++|...+..+... |++|+.+++++++.+.+ +++   +... ++  |..+ +..++ +.++.. ...
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l---Ga~~-~i--~~~~-~~~~~-v~~~t~-g~g  239 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV---GADA-AV--KSGA-GAADA-IRELTG-GQG  239 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT---TCSE-EE--ECST-THHHH-HHHHHG-GGC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc---CCCE-EE--cCCC-cHHHH-HHHHhC-CCC
Confidence            6899999998 99999988777666 78899999988876544 333   3332 22  2222 22222 222211 127


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      +|+++.++|..                             ..++..+..++  ..|+++.++...
T Consensus       240 ~d~v~d~~G~~-----------------------------~~~~~~~~~l~--~~G~iv~~G~~~  273 (345)
T 3jv7_A          240 ATAVFDFVGAQ-----------------------------STIDTAQQVVA--VDGHISVVGIHA  273 (345)
T ss_dssp             EEEEEESSCCH-----------------------------HHHHHHHHHEE--EEEEEEECSCCT
T ss_pred             CeEEEECCCCH-----------------------------HHHHHHHHHHh--cCCEEEEECCCC
Confidence            99999998741                             12445556663  468999887643

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.00  E-value=0.0079  Score=52.14  Aligned_cols=71  Identities=10%  Similarity=0.123  Sum_probs=55.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .++++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+      ..+.++.+|.++++.++++      .....|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a------~i~~a~  179 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKA------NVRGAR  179 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence            457999997 8999999999999999 999999988776 332      3478899999998887654      113578


Q ss_pred             EEEECC
Q 040531           95 ILFNNA  100 (285)
Q Consensus        95 ~lv~~a  100 (285)
                      .+|...
T Consensus       180 ~vi~~~  185 (336)
T 1lnq_A          180 AVIVDL  185 (336)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            787754

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.98  E-value=0.012  Score=49.73  Aligned_cols=39  Identities=15%  Similarity=0.141  Sum_probs=35.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++||+++|.|++.-+|+.+++.|++.|++|.++.++.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            478999999999999999999999999999999997655

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.95  E-value=0.027  Score=52.47  Aligned_cols=89  Identities=17%  Similarity=0.187  Sum_probs=55.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCc-------------------hhhHHHHHHhhcCCCc--eEEE
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDD-------------------AAGIALADSLLSSSPL--VTYL   69 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~-------------------~~~~~~~~~~~~~~~~--v~~~   69 (285)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.++|.+.                   .+.+.+.+.+.+..+.  +..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            468899999987 68999999999999954 88888753                   3555566666654554  4445


Q ss_pred             eccC-------CCHHHHHHHHHHHHHHcCCccEEEECCC
Q 040531           70 HCDV-------SLEQDIQNLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        70 ~~D~-------s~~~~i~~~~~~i~~~~~~id~lv~~ag  101 (285)
                      ..++       ++.+....-.+.+.+.....|+||.+..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            4443       2321111111112222335899998754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.93  E-value=0.0094  Score=51.99  Aligned_cols=77  Identities=12%  Similarity=0.064  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc--
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH--   90 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~--   90 (285)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ +++   +.. .+  .|..+.+    +.+++.+..  
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~-~v--i~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GAT-DI--INYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCC-EE--ECGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCc-eE--EcCCCcC----HHHHHHHHcCC
Confidence            5889999985 8999999988888899 799999888775433 344   222 12  2333322    222333332  


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      ..+|+++.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999998874

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.92  E-value=0.086  Score=45.23  Aligned_cols=115  Identities=16%  Similarity=0.122  Sum_probs=68.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+.|+|+ |.+|.+++..|++.|.  .|+++|++++.++....++...    .....+...|.             .+.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~-------------~~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND-------------YGPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS-------------SGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC-------------HHHh
Confidence            5789997 9999999999999886  8999999987766444333221    11222221121             1223


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      ..-|++|..+|....     +  ..+   -.+.++.|+.-...+.+.+...   ...+.+++++....
T Consensus        68 ~~aDvVii~ag~~~k-----p--G~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvd  122 (314)
T 3nep_X           68 EDSDVCIITAGLPRS-----P--GMS---RDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVANPLD  122 (314)
T ss_dssp             TTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECCSSHH
T ss_pred             CCCCEEEECCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecCCchh
Confidence            478999999987421     1  122   2345666765555555554432   24577777776443

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.90  E-value=0.076  Score=45.48  Aligned_cols=150  Identities=15%  Similarity=0.086  Sum_probs=88.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +.+.|+|| |.+|.+++..|+..+  ..++++|+++++++.....+....   ..+.+.. |  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            36889998 999999999999887  579999999887776555554321   2223222 2  2121           3


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc--------CC
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM--------GG  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~--------~~  162 (285)
                      ..-|++|..+|....     +  ..+.+   +.+..|+.-...+.+.+.++   ...+.++++|-.....        +.
T Consensus        66 ~~aD~Vii~ag~~~~-----~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~  132 (310)
T 2xxj_A           66 EGARAVVLAAGVAQR-----P--GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVDVMTQVAYALSGL  132 (310)
T ss_dssp             TTEEEEEECCCCCCC-----T--TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHHHHHHHHHHHTC
T ss_pred             CCCCEEEECCCCCCC-----C--CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchHHHHHHHHHHcCC
Confidence            479999999987422     1  22333   34666666555556655554   3467888876544331        23


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHhC--CCCcEE
Q 040531          163 LGPHAYTV-SKHAIVGLTKNTACELG--KYGIRV  193 (285)
Q Consensus       163 ~~~~~Y~a-sKaa~~~l~~~la~e~~--~~~i~v  193 (285)
                      |.....+. +-.=...+-..+|..+.  +..|+.
T Consensus       133 p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~  166 (310)
T 2xxj_A          133 PPGRVVGSGTILDTARFRALLAEYLRVAPQSVHA  166 (310)
T ss_dssp             CGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEE
T ss_pred             CHHHEEecCcchhHHHHHHHHHHHhCcCHHHeEE
Confidence            33233343 22223455556666654  334554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.90  E-value=0.032  Score=47.41  Aligned_cols=84  Identities=12%  Similarity=0.096  Sum_probs=57.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh-------hcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL-------LSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +++.|.| .|.+|..+++.|++.|++|++.+|+++..+.+.+.-       .+.-. ..++..-+.+...++.+++.+.+
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            4577776 588999999999999999999999998877665421       00001 23344455666777877777766


Q ss_pred             HcCCccEEEECCC
Q 040531           89 KHGRLDILFNNAG  101 (285)
Q Consensus        89 ~~~~id~lv~~ag  101 (285)
                      ...+-.++|+...
T Consensus        94 ~l~~g~ivv~~st  106 (296)
T 3qha_A           94 HAKPGTVIAIHST  106 (296)
T ss_dssp             TCCTTCEEEECSC
T ss_pred             hcCCCCEEEEeCC
Confidence            5544566776543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.87  E-value=0.098  Score=44.74  Aligned_cols=72  Identities=18%  Similarity=0.195  Sum_probs=50.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcC------CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSS------SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +.+.|+|| |.+|..++..|+..|. +|+++|++++.++.....+.+.      ..++... .|.   +           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---A-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---H-----------
Confidence            47899999 9999999999999996 8999999987776544444321      1222221 221   1           


Q ss_pred             HcCCccEEEECCCCC
Q 040531           89 KHGRLDILFNNAGVL  103 (285)
Q Consensus        89 ~~~~id~lv~~ag~~  103 (285)
                      .+...|++|..+|..
T Consensus        67 a~~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           67 DTANSDVIVVTSGAP   81 (309)
T ss_dssp             GGTTCSEEEECCCC-
T ss_pred             HHCCCCEEEEcCCCC
Confidence            124689999999874

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.87  E-value=0.095  Score=41.65  Aligned_cols=77  Identities=16%  Similarity=0.138  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-------------CCCceEEEeccCCCHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-------------SSPLVTYLHCDVSLEQDIQ   80 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-------------~~~~v~~~~~D~s~~~~i~   80 (285)
                      ++.++|..|++.|.   .+..|+++|++|+.+|.++..++.+.+....             ...++.++++|+.+...-.
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            67899999988773   3456777899999999999988877766532             1357899999998753211


Q ss_pred             HHHHHHHHHcCCccEEEECCCC
Q 040531           81 NLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        81 ~~~~~i~~~~~~id~lv~~ag~  102 (285)
                               .+.+|+++.+...
T Consensus        99 ---------~~~fD~v~~~~~l  111 (203)
T 1pjz_A           99 ---------IGHCAAFYDRAAM  111 (203)
T ss_dssp             ---------HHSEEEEEEESCG
T ss_pred             ---------CCCEEEEEECcch
Confidence                     1368999986543

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.86  E-value=0.012  Score=49.90  Aligned_cols=39  Identities=21%  Similarity=0.343  Sum_probs=35.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .+++|++++|.|++.-+|+.+++.|++.|++|.++.++.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  199 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT  199 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence            478999999999999999999999999999999987553

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.83  E-value=0.018  Score=48.98  Aligned_cols=44  Identities=25%  Similarity=0.283  Sum_probs=38.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .+++|++++|.|+ |+||+++++.+...|++|++++|+.++.+..
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~  194 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI  194 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            3689999999995 8999999999999999999999988765433

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.83  E-value=0.0014  Score=57.34  Aligned_cols=39  Identities=28%  Similarity=0.530  Sum_probs=35.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      +++||+++|.| .|.||+.+++.+.+.|++|++.|++..+
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            68999999996 5899999999999999999988887654

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.79  E-value=0.075  Score=44.77  Aligned_cols=84  Identities=10%  Similarity=0.004  Sum_probs=58.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCchhhHHHHHHhh--------c--CCCceEEEeccCCCHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA---KVVIADIDDAAGIALADSLL--------S--SSPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~---~v~~~~r~~~~~~~~~~~~~--------~--~~~~v~~~~~D~s~~~~i~~   81 (285)
                      .+++.|.|+ |.+|.+++..|++.|+   +|++.+|++++.+.+.+...        +  ...++.++.+   .+..+..
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            456888887 8999999999999998   89999999998887765421        0  1234555544   2356677


Q ss_pred             HHHHHHHH-cCCccEEEECCCC
Q 040531           82 LINVTISK-HGRLDILFNNAGV  102 (285)
Q Consensus        82 ~~~~i~~~-~~~id~lv~~ag~  102 (285)
                      +++++... ..+=.++|++++.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHhhccCCCeEEEEecCC
Confidence            77777655 4333378877553

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.79  E-value=0.015  Score=48.65  Aligned_cols=46  Identities=28%  Similarity=0.408  Sum_probs=40.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+..
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            6788 9999997 77999999999999999999999988877776655

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.77  E-value=0.011  Score=51.83  Aligned_cols=82  Identities=18%  Similarity=0.285  Sum_probs=56.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------hhhHHHHHHhhcCCC--ceE
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD-------------------AAGIALADSLLSSSP--LVT   67 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~--~v~   67 (285)
                      ...+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+.++  ++.
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~  191 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS  191 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEE
Confidence            44578999999998 7899999999999995 588888753                   234445555544343  466


Q ss_pred             EEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 040531           68 YLHCDVSLEQDIQNLINVTISKHGRLDILFNNA  100 (285)
Q Consensus        68 ~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~a  100 (285)
                      .+..++++..++       .+ +...|+||.+.
T Consensus       192 ~~~~~i~~~~~~-------~~-~~~~DlVvd~~  216 (353)
T 3h5n_A          192 EIALNINDYTDL-------HK-VPEADIWVVSA  216 (353)
T ss_dssp             EEECCCCSGGGG-------GG-SCCCSEEEECC
T ss_pred             EeecccCchhhh-------hH-hccCCEEEEec
Confidence            667777654322       12 45788888864

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.77  E-value=0.0081  Score=51.85  Aligned_cols=41  Identities=32%  Similarity=0.418  Sum_probs=35.7

Q ss_pred             Cc-EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           15 GK-IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        15 ~k-~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      ++ ++||+||+|++|..++..+...|++|+.+++++++.+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 799999999999999998888999999999987776544

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.72  E-value=0.015  Score=49.99  Aligned_cols=97  Identities=19%  Similarity=0.209  Sum_probs=63.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ++ +||+||+|++|...+..+...|++|+.+++++++.+.+. ++   +....+   |..+.+.    ++++  ..+.+|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~vi---~~~~~~~----~~~~--~~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL---GANRIL---SRDEFAE----SRPL--EKQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH---TCSEEE---EGGGSSC----CCSS--CCCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCEEE---ecCCHHH----HHhh--cCCCcc
Confidence            45 999999999999999999899999999999888765543 34   333222   2221111    1111  124689


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      +++.++|..                              .++..+..+  +..|+++.++...
T Consensus       214 ~v~d~~g~~------------------------------~~~~~~~~l--~~~G~iv~~G~~~  244 (324)
T 3nx4_A          214 GAIDTVGDK------------------------------VLAKVLAQM--NYGGCVAACGLAG  244 (324)
T ss_dssp             EEEESSCHH------------------------------HHHHHHHTE--EEEEEEEECCCTT
T ss_pred             EEEECCCcH------------------------------HHHHHHHHH--hcCCEEEEEecCC
Confidence            999987620                              234455656  3469999887653

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.71  E-value=0.067  Score=42.92  Aligned_cols=77  Identities=13%  Similarity=0.121  Sum_probs=51.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+..+++.|.| .|.+|.+++..|++.|++|++.+|+++         .-...++.++.+-   ...++.+++++....
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYATQL   81 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHHhc
Confidence            346778899999 789999999999999999999998876         1123455555443   566777777776544


Q ss_pred             CCccEEEECCC
Q 040531           91 GRLDILFNNAG  101 (285)
Q Consensus        91 ~~id~lv~~ag  101 (285)
                      . =.++|+.+.
T Consensus        82 ~-~~~vi~~~~   91 (209)
T 2raf_A           82 K-GKIVVDITN   91 (209)
T ss_dssp             T-TSEEEECCC
T ss_pred             C-CCEEEEECC
Confidence            3 345666543

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.66  E-value=0.088  Score=43.59  Aligned_cols=77  Identities=16%  Similarity=0.238  Sum_probs=57.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc------------------CCCceEEEeccCCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS------------------SSPLVTYLHCDVSL   75 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~------------------~~~~v~~~~~D~s~   75 (285)
                      ++..||..|++.|.   .+..|+++|++|+.++.++..++.+.+....                  ...++.++++|+.+
T Consensus        68 ~~~~vLD~GCG~G~---~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~  144 (252)
T 2gb4_A           68 SGLRVFFPLCGKAI---EMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD  144 (252)
T ss_dssp             CSCEEEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred             CCCeEEEeCCCCcH---HHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence            67899999988773   3567888999999999999988777555421                  23579999999977


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCC
Q 040531           76 EQDIQNLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        76 ~~~i~~~~~~i~~~~~~id~lv~~ag~  102 (285)
                      ...         ...+.+|+|+.++..
T Consensus       145 l~~---------~~~~~FD~V~~~~~l  162 (252)
T 2gb4_A          145 LPR---------ANIGKFDRIWDRGAL  162 (252)
T ss_dssp             GGG---------GCCCCEEEEEESSST
T ss_pred             CCc---------ccCCCEEEEEEhhhh
Confidence            421         112579999987543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.65  E-value=0.046  Score=46.99  Aligned_cols=88  Identities=10%  Similarity=0.043  Sum_probs=57.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh-------hcCCCceEEEeccCCCHHHHHHHHH-
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL-------LSSSPLVTYLHCDVSLEQDIQNLIN-   84 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~D~s~~~~i~~~~~-   84 (285)
                      .+.+++.|.|. |.+|..+++.|++.|++|++.+|+++..+++.+.-       .+.-.+..++..-+.+...++.++. 
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            34567888865 88999999999999999999999988877655320       0000112233334455667777665 


Q ss_pred             -HHHHHcCCccEEEECCC
Q 040531           85 -VTISKHGRLDILFNNAG  101 (285)
Q Consensus        85 -~i~~~~~~id~lv~~ag  101 (285)
                       .+.+...+-.++|+...
T Consensus       108 ~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence             55555445566666543

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.63  E-value=0.0036  Score=55.83  Aligned_cols=46  Identities=26%  Similarity=0.343  Sum_probs=38.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEE-EEec----------CchhhHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVV-IADI----------DDAAGIALADS   58 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~-~~~r----------~~~~~~~~~~~   58 (285)
                      +++|++++|+| .|.+|+.+++.|.+.|++|+ +.|+          +.+.+.+..++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            78999999998 88999999999999999988 7777          55666655554

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.63  E-value=0.036  Score=46.80  Aligned_cols=85  Identities=13%  Similarity=0.013  Sum_probs=56.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-C------CCceEEEeccCCCHHHHHHHH---HH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-S------SPLVTYLHCDVSLEQDIQNLI---NV   85 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~------~~~v~~~~~D~s~~~~i~~~~---~~   85 (285)
                      +++.|.|. |.+|..++..|++.|++|++.+|+++..+.+.+.-.. .      -.+..++..-+.+...++.++   +.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            46788875 8999999999999999999999999887766542100 0      001223334445566777776   66


Q ss_pred             HHHHcCCccEEEECCC
Q 040531           86 TISKHGRLDILFNNAG  101 (285)
Q Consensus        86 i~~~~~~id~lv~~ag  101 (285)
                      +.+...+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6555444456776643

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.58  E-value=0.15  Score=43.31  Aligned_cols=39  Identities=23%  Similarity=0.283  Sum_probs=34.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+++.++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            57888988 8999999999999999999999998877654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.55  E-value=0.23  Score=42.52  Aligned_cols=75  Identities=20%  Similarity=0.246  Sum_probs=50.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCC----CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSS----PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+.+.|+|+ |.+|.+++..|+..|.  .|+++|++++.++.....+....    ..+.+.. |  +.           +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence            468999999 9999999999998874  79999999876654444442211    1233332 2  11           1


Q ss_pred             HcCCccEEEECCCCCC
Q 040531           89 KHGRLDILFNNAGVLG  104 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (285)
                      .+...|++|.++|...
T Consensus        71 al~~aDvViia~~~~~   86 (316)
T 1ldn_A           71 DCRDADLVVICAGANQ   86 (316)
T ss_dssp             GTTTCSEEEECCSCCC
T ss_pred             HhCCCCEEEEcCCCCC
Confidence            2346899999998753

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.55  E-value=0.34  Score=41.04  Aligned_cols=113  Identities=12%  Similarity=0.063  Sum_probs=68.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhc----CCCceEEE-eccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLS----SSPLVTYL-HCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~-~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.|+|| |+||.+++..|+.++  ..++++|.++...+-..-.+..    ........ ..|.   +           .
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~---~-----------~   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-----------L   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG---G-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH---H-----------H
Confidence            4778895 999999999999887  3599999988766554444432    11222222 2232   1           1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      ...-|++|..||....       ...+.++   .++.|..=.-.+.+.+.+.   ...+.++.+|...
T Consensus        67 ~~~aDvVvitAG~prk-------pGmtR~d---Ll~~Na~I~~~i~~~i~~~---~p~aivlvvsNPv  121 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARK-------PGMTRLD---LAHKNAGIIKDIAKKIVEN---APESKILVVTNPM  121 (294)
T ss_dssp             GTTCSEEEECCCCCCC-------SSSCHHH---HHHHHHHHHHHHHHHHHTT---STTCEEEECSSSH
T ss_pred             hCCCCEEEEecCCCCC-------CCCchHH---HHHHHHHHHHHHHHHHHhc---CCceEEEEecCcc
Confidence            2468999999997532       1235444   4677765444444444332   2356666666644

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.52  E-value=0.2  Score=42.74  Aligned_cols=112  Identities=17%  Similarity=0.153  Sum_probs=70.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcC------CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSS------SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+.|+|+ |.+|.+++..|++.  |..|++++++++.++.....+...      ..++.. ..|.   +           
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~---~-----------   65 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SNDY---A-----------   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESCG---G-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCCH---H-----------
Confidence            5789998 99999999999985  789999999988776544333211      112221 1221   1           


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      .....|++|.+++....       ...+   -.++++.|+.-...+.+.+.+..   ..+.+++++...
T Consensus        66 ~l~~aDvViiav~~p~~-------~g~~---r~dl~~~n~~i~~~i~~~i~~~~---~~~~viv~tNP~  121 (310)
T 1guz_A           66 DTANSDIVIITAGLPRK-------PGMT---REDLLMKNAGIVKEVTDNIMKHS---KNPIIIVVSNPL  121 (310)
T ss_dssp             GGTTCSEEEECCSCCCC-------TTCC---HHHHHHHHHHHHHHHHHHHHHHC---SSCEEEECCSSH
T ss_pred             HHCCCCEEEEeCCCCCC-------CCCC---HHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEEcCch
Confidence            12468999999875321       1112   23566677766666777766652   456777775543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.52  E-value=0.043  Score=44.65  Aligned_cols=39  Identities=23%  Similarity=0.474  Sum_probs=34.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+++||.+||+||+ .+|...++.|++.|+.|++++.+..
T Consensus        27 l~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           27 LDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             ECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCC
Confidence            47899999999975 7899999999999999999987643

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.50  E-value=0.14  Score=46.73  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=36.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS   58 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~   58 (285)
                      -+++.|.|+ |-+|.++|..|++.|+.|++.+++++.++...+.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            345666665 8999999999999999999999999988776553

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.38  E-value=0.065  Score=45.52  Aligned_cols=79  Identities=16%  Similarity=0.134  Sum_probs=51.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +++.|.||.|.+|.+++..|++.|++|++++|+++...  .+.+  ...++.++.+-..   .+..+++++.....+=.+
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~--~~~~--~~aDvVilavp~~---~~~~vl~~l~~~l~~~~i   94 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA--ESIL--ANADVVIVSVPIN---LTLETIERLKPYLTENML   94 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH--HHHH--TTCSEEEECSCGG---GHHHHHHHHGGGCCTTSE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCH--HHHh--cCCCEEEEeCCHH---HHHHHHHHHHhhcCCCcE
Confidence            56899999999999999999999999999998875311  1111  1345666655443   256666666443332234


Q ss_pred             EEECCC
Q 040531           96 LFNNAG  101 (285)
Q Consensus        96 lv~~ag  101 (285)
                      |+..++
T Consensus        95 v~~~~s  100 (298)
T 2pv7_A           95 LADLTS  100 (298)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            555444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	285
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-73
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-71
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	8e-70
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-69
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-67
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-66
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-65
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-64
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-63
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-63
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-63
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-63
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-62
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-61
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-61
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-61
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-60
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-60
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-59
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-59
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-59
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-59
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-59
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-59
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-58
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-58
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-58
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	9e-58
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	9e-58
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-57
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-57
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	9e-57
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-56
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-56
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-54
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-54
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	8e-54
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-53
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-52
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-51
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	8e-51
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	8e-51
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-50
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-50
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-49
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-47
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	9e-47
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-46
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-43
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	5e-43
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	8e-42
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-40
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-40
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-39
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-38
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-37
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-36
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-34
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-34
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-33
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-32
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-26
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	8e-26
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-24
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-18
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-16
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-15
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	6e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	7e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	8e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	5e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.003
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.003

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  222 bits (566), Expect = 7e-73
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 22/267 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             GK  +VTGGARGIG A  + F + GA V + D+       +A+++        +   D
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----GAFFQVD 56

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +  E++    +       GR+D+L NNA +    +   S       E+  ++ +N+    
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAI----AAPGSALTVRLPEWRRVLEVNLTAPM 112

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
                AA+ M     G I++ ASV  L       AY  SK  +V LT++ A +L    IR
Sbjct: 113 HLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIR 172

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN ++P  +AT  ++ A                + E+       L  L+ +  K  ++AE
Sbjct: 173 VNAVAPGAIATEAVLEAIAL-----------SPDPERTRRDWEDLHALRRLG-KPEEVAE 220

Query: 253 AALYLASDESKYISGHNLVVDGGFTTS 279
           A L+LAS+++ +I+G  L VDGG T S
Sbjct: 221 AVLFLASEKASFITGAILPVDGGMTAS 247

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  219 bits (558), Expect = 2e-71
 Identities = 124/268 (46%), Positives = 181/268 (67%), Gaps = 17/268 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K+AI+TGGA GIGE T +LFV++GAKVVIADI D  G  + ++ + S  +++++HCD
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN-IGSPDVISFVHCD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ ++D++NL++ TI+KHG+LDI+F N GVL       SI +    +F  ++ INV GA 
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST--TPYSILEAGNEDFKRVMDINVYGAF 120

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA-YTVSKHAIVGLTKNTACELGKYGI 191
           L  K+AA+VM+P + G I+ TAS++S   G G    YT +KHA++GLT +   ELG+YGI
Sbjct: 121 LVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 180

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVNC+SP+ VA+ +L + +               +  ++EEL    ANLKG  L+A D+A
Sbjct: 181 RVNCVSPYIVASPLLTDVFG-------------VDSSRVEELAHQAANLKGTLLRAEDVA 227

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTS 279
           +A  YLA DESKY+SG NLV+DGG+T +
Sbjct: 228 DAVAYLAGDESKYVSGLNLVIDGGYTRT 255

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  214 bits (547), Expect = 8e-70
 Identities = 84/271 (30%), Positives = 125/271 (46%), Gaps = 17/271 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS---SSPLVTYL 69
              K+AI+TG + GIG AT  LF + GAKV I              +L+   S   V  +
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+ +     +++ T+ K G+LDIL NNAG     S+ K+ T      +D  + +N+R
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 K A   +   +   +  ++  + L        Y+++K AI   T+NTA +L ++
Sbjct: 123 SVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH 182

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL--KGVTLKA 247
           GIRVN ISP  VAT                    EE  +K    +  +      GV  + 
Sbjct: 183 GIRVNSISPGLVATGFGSAMGMP-----------EETSKKFYSTMATMKECVPAGVMGQP 231

Query: 248 RDIAEAALYLASDE-SKYISGHNLVVDGGFT 277
           +DIAE   +LA  + S YI GH LVVDGG +
Sbjct: 232 QDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  212 bits (540), Expect = 5e-69
 Identities = 79/265 (29%), Positives = 114/265 (43%), Gaps = 22/265 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K+A++TGGA GIG A    F   GA + IAD+  A     A   L     V  + CD
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVKCD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS   D++      IS  GR DIL NNAG+           +    ++     INV    
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGI----YPLIPFDELTFEQWKKTFEINVDSGF 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  K     M     G II+  S    +       Y  +K A +G T+  A +LGK GI 
Sbjct: 117 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 176

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN I+P  V T+    +                  + +  +++ +  L+       D+  
Sbjct: 177 VNAIAPSLVRTATTEASAL------------SAMFDVLPNMLQAIPRLQ----VPLDLTG 220

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           AA +LASD++ +I+G  L VDGG  
Sbjct: 221 AAAFLASDDASFITGQTLAVDGGMV 245

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  208 bits (530), Expect = 4e-67
 Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 17/271 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS---SSPLVTYL 69
              K  I+TG + GIG  T  LF + GA V I              +L    S   V  +
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+ E     +IN T+ + G++D+L NNAG     +   + TD   + +   +++N++
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 K     +V  +   +  ++ VA          Y ++K A+   T++TA +L K+
Sbjct: 123 AVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKF 182

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKA 247
           GIRVN +SP  V T                    ++  +K    +         G   K 
Sbjct: 183 GIRVNSVSPGMVETGFTNAMGMP-----------DQASQKFYNFMASHKECIPIGAAGKP 231

Query: 248 RDIAEAALYLASDE-SKYISGHNLVVDGGFT 277
             IA   L+LA    S YI G ++V DGG +
Sbjct: 232 EHIANIILFLADRNLSFYILGQSIVADGGTS 262

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (523), Expect = 2e-66
 Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 21/265 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             GK+ +VTGG RGIG   VR FV  GA+VVI D D++ G AL   L    P   ++ CD
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ E D++ L++ TI + GRLD + NNAG   +    +   +  A  F  ++ +N+ G  
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAG---HHPPPQRPEETSAQGFRQLLELNLLGTY 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K A   +  +  G +I+ +S+   +G      Y  +K A+  +TK  A +   YG+R
Sbjct: 117 TLTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR 175

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VNCISP  + T +         D              + E +  LA   G   +  ++  
Sbjct: 176 VNCISPGNIWTPLWEELAALMPD----------PRASIREGM--LAQPLGRMGQPAEVGA 223

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           AA++LAS+ + + +G  L+V GG  
Sbjct: 224 AAVFLASE-ANFCTGIELLVTGGAE 247

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  202 bits (515), Expect = 4e-65
 Identities = 88/266 (33%), Positives = 122/266 (45%), Gaps = 24/266 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK  I+TGGARG+G    R  V  GA+VV+AD+ D  G A A  L  +     Y H D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA---ARYQHLD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V++E+D Q ++     + G +D L NNAG+           +     F  ++ IN+ G  
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER----FRKVVEINLTGVF 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           +GMK     M     G I++ +S A LMG     +Y  SK  + GL+K  A ELG   IR
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN + P    T M                    + E           +  V  +  +IA 
Sbjct: 176 VNSVHPGMTYTPMTAETG-------------IRQGEGNYPNT----PMGRVGNEPGEIAG 218

Query: 253 AALYLASDESKYISGHNLVVDGGFTT 278
           A + L SD S Y++G  L VDGG+TT
Sbjct: 219 AVVKLLSDTSSYVTGAELAVDGGWTT 244

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  199 bits (507), Expect = 7e-64
 Identities = 84/269 (31%), Positives = 123/269 (45%), Gaps = 27/269 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+A+VTGGA G+G   V+L +  GAKV  +DI++AAG  LA  L        ++  D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS E D   ++     + G L++L NNAG+         +      +F  +++IN     
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGI----LLPGDMETGRLEDFSRLLKINTESVF 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK--YG 190
           +G +     M     G II+ ASV+S +       Y+ SK A+  LT+  A    K  Y 
Sbjct: 117 IGCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYA 175

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKAR 248
           IRVN I P G+ T M+  +                 +   +E+V     L   G      
Sbjct: 176 IRVNSIHPDGIYTPMMQASL---------------PKGVSKEMVLHDPKLNRAGRAYMPE 220

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
            IA+  L+LASDES  +SG  L  D    
Sbjct: 221 RIAQLVLFLASDESSVMSGSELHADNSIL 249

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  199 bits (506), Expect = 1e-63
 Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 18/266 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           LEG  A+VTGG+RGIG   V      GA V     +            S    V    CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 73  VSLEQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +S   + Q L+N   +  HG+L+IL NNAG+      +K   D+   ++  I+ IN   A
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGI----VIYKEAKDYTVEDYSLIMSINFEAA 121

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
                 A   +     G ++  +SV+  +       Y  +K A+  LT+  A E  K  I
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN + P  +ATS++    +             E++E + +L+   A       + +++A
Sbjct: 182 RVNGVGPGVIATSLVEMTIQD-----------PEQKENLNKLIDRCA--LRRMGEPKELA 228

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
               +L    + Y++G  + VDGG  
Sbjct: 229 AMVAFLCFPAASYVTGQIIYVDGGLM 254

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  198 bits (505), Expect = 1e-63
 Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 25/268 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+AI+TGG  GIG A    FV+ GAKV+I       G   A S + +   + +   D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS-VGTPDQIQFFQHD 62

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
            S E     L + T    G +  L NNAG+    + +KS+ +    E+  ++ +N+ G  
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGI----AVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 133 LGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTA--CELGKY 189
            G +   + M  +  G  II+ +S+   +G     AY  SK A+  ++K+ A  C L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            +RVN + P  + T ++ +                  EE M +  +      G   +  D
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLP--------------GAEEAMSQRTK---TPMGHIGEPND 221

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           IA   +YLAS+ESK+ +G   VVDGG+T
Sbjct: 222 IAYICVYLASNESKFATGSEFVVDGGYT 249

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  198 bits (504), Expect = 2e-63
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 22/266 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K  +VTGG +GIG A V  F   GA +     ++                VT   CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 73  VSLEQDIQNLINVTISKH-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
            SL  + + L+    S   G+LDIL NN G      + K   D+ A +F   I  N+  A
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGA----IRSKPTLDYTAEDFSFHISTNLESA 121

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + A  ++     G II  +S+A ++       Y+ +K A+  L +N ACE    GI
Sbjct: 122 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           R N ++P  +AT +    +             +E ++ +           G   +  +++
Sbjct: 182 RANAVAPAVIATPLAEAVY------------DDEFKKVVISRK-----PLGRFGEPEEVS 224

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
               +L    + YI+G  + VDGG T
Sbjct: 225 SLVAFLCMPAASYITGQTICVDGGLT 250

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  197 bits (501), Expect = 8e-63
 Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 19/271 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS---SSPLVTYL 69
             GK  I+TG + GIG +   +F K GA+V I   ++         +L     +  +  +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV+      ++IN T++K G++DIL NNAG   N +   + TD     +    ++N +
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGA--NLADGTANTDQPVELYQKTFKLNFQ 119

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 +   + ++  +   +  ++ VA      G   Y  +K A+   T+ TA +L ++
Sbjct: 120 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 179

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK--GVTLKA 247
           G+RVN +SP  VAT             M +    E   +K+   +         G   K 
Sbjct: 180 GVRVNSVSPGAVATGF-----------MGAMGLPETASDKLYSFIGSRKECIPVGHCGKP 228

Query: 248 RDIAEAALYLAS-DESKYISGHNLVVDGGFT 277
            +IA   ++LA  + S YI G ++V DGG T
Sbjct: 229 EEIANIIVFLADRNLSSYIIGQSIVADGGST 259

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  194 bits (494), Expect = 5e-62
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 22/268 (8%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYL 69
           Y   E K+A+VTG  RGIG    ++  K  + V+       +  ++ D + S     +  
Sbjct: 5   YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY 64

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DVS +++I  +IN  +++H  +DIL NNAG+  +    +   D     +++++R N+ 
Sbjct: 65  AGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDE----WEDVLRTNLN 120

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 +  +K M+  R G II+ +S+  L G +G   Y+ SK  ++G TK+ A EL   
Sbjct: 121 SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASR 180

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
            I VN I+P  +++ M     +  +  + S  P                   G      +
Sbjct: 181 NITVNAIAPGFISSDMTDKISEQIKKNIISNIPA------------------GRMGTPEE 222

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
           +A  A +L+SD+S YI+G   V+DGG +
Sbjct: 223 VANLACFLSSDKSGYINGRVFVIDGGLS 250

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  192 bits (489), Expect = 2e-61
 Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 29/268 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
             G  A+VTG  +GIG  TV+     GAKVV     ++  ++LA         +  +  D
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +      +      +   G +D+L NNA +       +   +     FD    +N+R   
Sbjct: 59  LGDWDATEK----ALGGIGPVDLLVNNAAL----VIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 133 LGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ M+ R   G I++ +S+ + +       Y+ +K A+  LTK  A ELG + I
Sbjct: 111 QVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 170

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P  V T M                   E   K++E             +  D+ 
Sbjct: 171 RVNSVNPTVVLTDMGKKVSAD-----------PEFARKLKERH-----PLRKFAEVEDVV 214

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTS 279
            + L+L SD S   SG  ++VD G+  S
Sbjct: 215 NSILFLLSDRSASTSGGGILVDAGYLAS 242

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  192 bits (488), Expect = 4e-61
 Identities = 85/269 (31%), Positives = 139/269 (51%), Gaps = 15/269 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLH 70
              ++ ++TGG  G+G AT       GAK+ + D+      A   ++L ++P   V    
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS E  ++  +  T  + GR+D  FNNA   G + K      F A EFD ++ IN+RG
Sbjct: 62  ADVSDEAQVEAYVTATTERFGRIDGFFNNA---GIEGKQNPTESFTAAEFDKVVSINLRG 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             LG++   K+M  + SG +++TASV  + G      Y  +KH +VGLT+N+A E G+YG
Sbjct: 119 VFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYG 178

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IR+N I+P  + T M+ N+ K  +         E   +  EE ++   N      +A +I
Sbjct: 179 IRINAIAPGAIWTPMVENSMKQLDP--------ENPRKAAEEFIQ--VNPSKRYGEAPEI 228

Query: 251 AEAALYLASDESKYISGHNLVVDGGFTTS 279
           A    +L SD++ Y++   + +DGG + +
Sbjct: 229 AAVVAFLLSDDASYVNATVVPIDGGQSAA 257

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (486), Expect = 9e-61
 Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 30/273 (10%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTY 68
           +    ++A+VTG + GIG A  R  V+ G KVV           LA    S+     +  
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             CD+S E+DI ++ +   S+H  +DI  NNAG+    ++  ++     + + ++  +NV
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL----ARPDTLLSGSTSGWKDMFNVNV 121

Query: 129 RGAALGMKYAAKVMVPRR--SGCIISTASVASL--MGGLGPHAYTVSKHAIVGLTKNTAC 184
              ++  + A + M  R    G II+  S++    +     H Y+ +K+A+  LT+    
Sbjct: 122 LALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 181

Query: 185 EL--GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKG 242
           EL   +  IR  CISP  V T                    +++ EK           + 
Sbjct: 182 ELREAQTHIRATCISPGVVETQFAFKLH-------------DKDPEKAAATYE-----QM 223

Query: 243 VTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
             LK  D+AEA +Y+ S  +    G   +   G
Sbjct: 224 KCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG 256

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  189 bits (480), Expect = 4e-60
 Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 28/265 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+ K  ++TG A GIG AT+ LF K GA++V  DI++      A+++         +  D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMD 57

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    ++      ++  GRLD + + AG     ++          +++ ++R+N+ G+ 
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAG----ITRDNFHWKMPLEDWELVLRVNLTGSF 113

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  K A++ M  +  G I+ TAS    +G LG   Y  S   +VGLT+  A ELG++GIR
Sbjct: 114 LVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIR 172

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN ++P  + T M     +   +   +  P                   G   K  ++A 
Sbjct: 173 VNTLAPGFIETRMTAKVPEKVREKAIAATPL------------------GRAGKPLEVAY 214

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           AAL+L SDES +I+G  L VDGG T
Sbjct: 215 AALFLLSDESSFITGQVLFVDGGRT 239

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  189 bits (481), Expect = 5e-60
 Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 5/265 (1%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K   GK+ +VTG    IG AT     + G  + + D++  A      S+           
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+ E+ +   ++  +   G++D LFNNAG  G  +  +   D+ +++F  ++ INV G
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQ---DYPSDDFARVLTINVTG 117

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A   +K  ++ M+ +  G I++TAS+A + G     AY  SK AI+ LT+  A +L  Y 
Sbjct: 118 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 177

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN ISP  +    +       +  + S     + +   ++++  +           +I
Sbjct: 178 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP--MRRYGDINEI 235

Query: 251 AEAALYLASDESKYISGHNLVVDGG 275
                +L  D+S +++G NL + GG
Sbjct: 236 PGVVAFLLGDDSSFMTGVNLPIAGG 260

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  188 bits (478), Expect = 1e-59
 Identities = 82/269 (30%), Positives = 120/269 (44%), Gaps = 22/269 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK AI+TG   GIG+     F   GA VV++DI+  A   + D +           CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           ++ EQ++  L +  ISK G++DIL NNAG  G         D    +F     +NV    
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGP-----KPFDMPMADFRRAYELNVFSFF 123

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              +  A  M     G I++  S+A+    +   +Y  SK A   L +N A +LG+  IR
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN I+P  + T  L +                E E+KM +             + +DIA 
Sbjct: 184 VNGIAPGAILTDALKSVIT------------PEIEQKMLQHT-----PIRRLGQPQDIAN 226

Query: 253 AALYLASDESKYISGHNLVVDGGFTTSKN 281
           AAL+L S  + ++SG  L V GG     N
Sbjct: 227 AALFLCSPAASWVSGQILTVSGGGVQELN 255

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  188 bits (477), Expect = 2e-59
 Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 13/267 (4%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYL 69
           K L GK+A+ TG  RGIG        + GA VV+     +     +   L         +
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             D+S   ++  L +  +S  G LD + +N+G+           +     FD +  +N R
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGM----EVWCDELEVTQELFDKVFNLNTR 117

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY-TVSKHAIVGLTKNTACELGK 188
           G     +   K    RR G II T+S+A++M G+  HA    SK A+ G  +  A + G 
Sbjct: 118 GQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 175

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
            G+ VNCI+P GV T M              G P    +EK++E +  +  LK +     
Sbjct: 176 KGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP----QEKIDEGLANMNPLKRIG-YPA 230

Query: 249 DIAEAALYLASDESKYISGHNLVVDGG 275
           DI  A   L  +ES++I+G  + + GG
Sbjct: 231 DIGRAVSALCQEESEWINGQVIKLTGG 257

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  187 bits (476), Expect = 4e-59
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 13/269 (4%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYL 69
            +LEGK+A+VTG  RGIG        + G KV++   +       +  ++  +      +
Sbjct: 14  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV 73

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             +V + +DI  +    +   G+LDI+ +N+G          + D    EFD +  IN R
Sbjct: 74  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG----VVSFGHVKDVTPEEFDRVFTINTR 129

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY-TVSKHAIVGLTKNTACELGK 188
           G     + A K +       ++ +  +      +  HA  + SK AI    +  A ++  
Sbjct: 130 GQFFVAREAYKHLEIGGRLILMGS--ITGQAKAVPKHAVYSGSKGAIETFARCMAIDMAD 187

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
             I VN ++P G+ T M     +      ++    E +E    +                
Sbjct: 188 KKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS-----PLRRVGLPI 242

Query: 249 DIAEAALYLASDESKYISGHNLVVDGGFT 277
           DIA    +LAS++  +++G  + +DGG  
Sbjct: 243 DIARVVCFLASNDGGWVTGKVIGIDGGAC 271

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  188 bits (479), Expect = 4e-59
 Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 39/271 (14%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-----AAGIALADSLLSS-SPLV 66
            +G++ +VTG   G+G A    F + GA VV+ D+         G + AD ++       
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 67  TYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRI 126
                +    +  + L+   +   GR+D++ NNAG+L      +S +     ++D I R+
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR----DRSFSRISDEDWDIIQRV 120

Query: 127 NVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACEL 186
           ++RG+    + A   M  +  G II TAS + + G  G   Y+ +K  ++GL      E 
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
            K  I  N I+P   +                       E    E+LV          LK
Sbjct: 181 RKNNIHCNTIAPNAGSRMT--------------------ETVMPEDLVE--------ALK 212

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              +A   L+L  +     +G    V  G+ 
Sbjct: 213 PEYVAPLVLWLCHESC-EENGGLFEVGAGWI 242

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  186 bits (474), Expect = 5e-59
 Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 17/266 (6%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+G  A+VTGG++GIG A V      GA+V     ++       +        V    CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 73  VSLEQDIQNLINVTISK-HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           +    +   L+        G+L+IL NNA        HK   DF   +++ I+  N   A
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNA----GVVIHKEAKDFTEKDYNIIMGTNFEAA 119

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
               + A  ++   ++G +I  +S+A          Y+ SK AI  +TK+ ACE  K  I
Sbjct: 120 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 179

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P  + T +     ++        K   +       + R          K ++++
Sbjct: 180 RVNSVAPGVILTPL----VETAIKKNPHQKEEIDNFIVKTPMGR--------AGKPQEVS 227

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
               +L    + YI+G  +  DGGFT
Sbjct: 228 ALIAFLCFPAASYITGQIIWADGGFT 253

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  186 bits (473), Expect = 7e-59
 Identities = 67/274 (24%), Positives = 100/274 (36%), Gaps = 31/274 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
              K  IVTGG RGIG A  R     GA V +     A  + + + +     +      C
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS    +   I    +  G +  L  NA      S  K  T+    +F  +  +NV G 
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANA----GVSVVKPATELTHEDFAFVYDVNVFGV 122

Query: 132 ALGMKYAAKVMVPRRSGCII--------STASVASLMGGLGPHAYTVSKHAIVGLTKNTA 183
               +  AK+ + ++    I           + +SL G L    Y  SK A   L K  A
Sbjct: 123 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 182

Query: 184 CELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV 243
            E    GIRVN +SP  V T                       ++K+ +       L   
Sbjct: 183 AEWASAGIRVNALSPGYVNTDQT-----------------AHMDKKIRDHQASNIPLNRF 225

Query: 244 TLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             +  ++   A+ L SD + Y++G    +DGG  
Sbjct: 226 -AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 258

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (472), Expect = 1e-58
 Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 31/271 (11%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL--VTYLHC 71
            GK+A+VTG A+GIG A     +  GAKV + D +  AG+    +L          ++ C
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV+ +Q +++     +   GRLDIL NNAGV             +   ++  ++IN+   
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGV------------NNEKNWEKTLQINLVSV 109

Query: 132 ALGMKYAAKVMVPRRSGC---IISTASVASLMGGLGPHAYTVSKHAIVGLTKNT--ACEL 186
             G       M  +  G    II+ +S+A LM       Y  SKH IVG T++   A  L
Sbjct: 110 ISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANL 169

Query: 187 GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK 246
              G+R+N I P  V T++L +  K      ++     E ++ ++++++         L 
Sbjct: 170 MNSGVRLNAICPGFVNTAILESIEKE-----ENMGQYIEYKDHIKDMIK-----YYGILD 219

Query: 247 ARDIAEAALYLASDESKYISGHNLVVDGGFT 277
              IA   + L  D+   ++G  + +     
Sbjct: 220 PPLIANGLITLIEDD--ALNGAIMKITTSKG 248

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  184 bits (469), Expect = 3e-58
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 22/269 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L G++A+VTGG+RG+G    +   + G  VV+A  +       A  L     +      C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DVS  ++++ L+     K G+LD + N AG+    ++     +F  +EF  +I +N+ G 
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI----NRRHPAEEFPLDEFRQVIEVNLFGT 118

Query: 132 A-LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             +  +  + +        I   +     +      AY  SK  +  LTK  A E G+YG
Sbjct: 119 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 178

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN I+P    T M    +               + EK++ +++ +    G T    D+
Sbjct: 179 IRVNVIAPGWYRTKMTEAVF--------------SDPEKLDYMLKRIP--LGRTGVPEDL 222

Query: 251 AEAALYLASDESKYISGHNLVVDGGFTTS 279
              A++LAS+E+KY++G  + VDGG+T +
Sbjct: 223 KGVAVFLASEEAKYVTGQIIFVDGGWTAN 251

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  183 bits (466), Expect = 8e-58
 Identities = 52/260 (20%), Positives = 88/260 (33%), Gaps = 19/260 (7%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ 77
           AIVT      G  +     + G  V   D        L       +   TY       EQ
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE------AFAETYPQLKPMSEQ 56

Query: 78  DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKY 137
           +   LI    S +G++D+L +N        + + I  +   ++   +          +  
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAP---EFQPIDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 138 AAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCIS 197
            A  M  R+SG II   S            YT ++     L    + ELG+Y I V  I 
Sbjct: 114 VASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIG 173

Query: 198 PFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYL 257
           P  + +      +          +P +   E +  + +  A         +++ E   +L
Sbjct: 174 PNYLHSEDSPYFYP--------TEPWKTNPEHVAHVKKVTA--LQRLGTQKELGELVAFL 223

Query: 258 ASDESKYISGHNLVVDGGFT 277
           AS    Y++G    + GGF 
Sbjct: 224 ASGSCDYLTGQVFWLAGGFP 243

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 9e-58
 Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 29/266 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L G+  +VTG  +GIG  TV+     GA+VV      A      DSL+   P +  +  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD----LDSLVRECPGIEPVCVD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +   +  +  +       G +D+L NNA      +  +   +     FD    +N+R   
Sbjct: 61  LGDWEATERALG----SVGPVDLLVNNAA----VALLQPFLEVTKEAFDRSFEVNLRAVI 112

Query: 133 LGMKYAAKVMVPRRSGC-IISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +  A+ ++ R     I++ +S  S         Y  +K A+  LTK  A ELG + I
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN ++P  V TSM    W               +  K + ++  +    G   +   + 
Sbjct: 173 RVNAVNPTVVMTSMGQATW--------------SDPHKAKTMLNRIP--LGKFAEVEHVV 216

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
            A L+L SD S   +G  L V+GGF 
Sbjct: 217 NAILFLLSDRSGMTTGSTLPVEGGFW 242

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (469), Expect = 9e-58
 Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 24/270 (8%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-----VT 67
           L+G++AIVTGGA GIG+A V+  ++ G+ VVIA        + AD L ++ P      V 
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 68  YLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRIN 127
            + C++  E+++ NL+  T+   G+++ L NN G               +  +  ++  N
Sbjct: 70  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG----GQFLSPAEHISSKGWHAVLETN 125

Query: 128 VRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
           + G     K      +    G I++   V +  G         ++  +  LTK+ A E  
Sbjct: 126 LTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 184

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             GIR+NC++P  + +   V  +                +   E   + +          
Sbjct: 185 CSGIRINCVAPGVIYSQTAVENYG------------SWGQSFFEGSFQKIP--AKRIGVP 230

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            +++    +L S  + +I+G ++ VDGG +
Sbjct: 231 EEVSSVVCFLLSPAASFITGQSVDVDGGRS 260

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  182 bits (463), Expect = 3e-57
 Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 13/266 (4%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            ++A+VTG   GIG    R   K G +V +    +         L  +        CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
              +I+ L+   + ++G +D+L NNAG    +    +  +     + +++  N+ G    
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRV 117

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPH--AYTVSKHAIVGLTKNTACELGKYGIR 192
            K   K       G        ++       H   Y+ SKH +VG TK    EL + GI 
Sbjct: 118 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 177

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN + P  V T M  +  +   D  +        EE  + +   +    G  ++  ++AE
Sbjct: 178 VNAVCPGFVETPMAASVREHYSDIWE-----VSTEEAFDRITARVP--IGRYVQPSEVAE 230

Query: 253 AALYLASDESKYISGHNLVVDGGFTT 278
              YL    +  ++   L V GG   
Sbjct: 231 MVAYLIGPGAAAVTAQALNVCGGLGN 256

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  182 bits (464), Expect = 3e-57
 Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 15/267 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+G+  ++TGGA G+G A V  FV  GAKV + D        L      +   V  +  D
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN---VLGIVGD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFD-ANEFDNIIRINVRGA 131
           V   +D +   +  +++ G++D L  NAG+    +    + +      FD +  INV+G 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 132 ALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
              +K     +V  R G +I T S A      G   YT +KHAIVGL +  A EL  Y +
Sbjct: 120 IHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-V 177

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           RVN +   G+ + +   +         S  P  +  + +  + R          +  +  
Sbjct: 178 RVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR--------MPEVEEYT 229

Query: 252 EAALYLAS-DESKYISGHNLVVDGGFT 277
            A ++ A+  ++   +G  L  DGG  
Sbjct: 230 GAYVFFATRGDAAPATGALLNYDGGLG 256

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 9e-57
 Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 26/266 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK+ I+T  A+GIG+A    F + GAKV+  DI+++    L        P +     D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLD 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ ++ I    N    +  RLD+LFN AG       H ++ D +  ++D  + +NVR   
Sbjct: 59  VTKKKQIDQFAN----EVERLDVLFNVAGF----VHHGTVLDCEEKDWDFSMNLNVRSMY 110

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
           L +K     M+ ++SG II+ +SVAS + G+     Y+ +K A++GLTK+ A +  + GI
Sbjct: 111 LMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
           R NC+ P  V T  L    ++  +          +  K ++  R           A +IA
Sbjct: 171 RCNCVCPGTVDTPSLQERIQARGNPE----EARNDFLKRQKTGR--------FATAEEIA 218

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
              +YLASDES Y++G+ +++DGG++
Sbjct: 219 MLCVYLASDESAYVTGNPVIIDGGWS 244

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  179 bits (455), Expect = 2e-56
 Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 25/265 (9%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
            EGKIA+VTG +RGIG A        GAKV+     +    A++D L         L  +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKGLMLN 58

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    I++++    ++ G +DIL NNA      ++   +      E+++II  N+    
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNA----GITRDNLLMRMKDEEWNDIIETNLSSVF 114

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              K   + M+ +R G II+  SV   MG  G   Y  +K  ++G +K+ A E+   GI 
Sbjct: 115 RLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGIT 174

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN ++P  + T M           + +  P                   G    A++IA 
Sbjct: 175 VNVVAPGFIETDMTRALSDDQRAGILAQVPA------------------GRLGGAQEIAN 216

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           A  +LASDE+ YI+G  L V+GG  
Sbjct: 217 AVAFLASDEAAYITGETLHVNGGMY 241

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  180 bits (457), Expect = 6e-56
 Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 21/267 (7%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
            +GK+A +TGG  G+G+    L    GA+ VIA        A A+ + S +   V  + C
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 82

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGA 131
           DV     +QN ++  I   G  +I+ NNA      +          N +  I  I + G 
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNA----AGNFISPTERLSPNAWKTITDIVLNGT 138

Query: 132 A-LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
           A + ++   +++  ++    +S  ++ +  G         +K  +  ++K+ A E GKYG
Sbjct: 139 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 198

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           +R N I P  + T                  P    E++M   +       G      ++
Sbjct: 199 MRFNVIQPGPIKTKG----------AFSRLDPTGTFEKEMIGRI-----PCGRLGTVEEL 243

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
           A  A +L SD + +I+G  +  DGG  
Sbjct: 244 ANLAAFLCSDYASWINGAVIKFDGGEE 270

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  178 bits (452), Expect = 8e-56
 Identities = 93/265 (35%), Positives = 133/265 (50%), Gaps = 30/265 (11%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK+A+V+GGARG+G + VR  V  GAKVV  DI D  G A+A  L  +     Y+H D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA---ARYVHLD 60

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+     +  ++  ++  G L +L NNAG+L   +      D+   E+  I+ +N+ G  
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE----DYALTEWQRILDVNLTGVF 116

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           LG++   K M     G II+ +S+  L G +  H YT +K A+ GLTK+TA ELG  GIR
Sbjct: 117 LGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 176

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN I P  V T M                      + + E +       G   +  +++ 
Sbjct: 177 VNSIHPGLVKTPMT---------------------DWVPEDIF--QTALGRAAEPVEVSN 213

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
             +YLASDES Y +G   VVDGG  
Sbjct: 214 LVVYLASDESSYSTGAEFVVDGGTV 238

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  175 bits (444), Expect = 2e-54
 Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 12/267 (4%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLH 70
           L+GK+A+VTG   GIG          GA +V+    DAA I    + L++     V Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S  + ++ L++  + + GR+DIL NN            I DF   ++D I+ +N+  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNN----AGIQHTALIEDFPTEKWDAILALNLSA 117

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
              G   A   M  +  G II+ AS   L+      AY  +KH +VG TK TA E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           I  N I P  V T ++     +  +     K   ++E    EL+          +    +
Sbjct: 178 ITANAICPGWVRTPLVEKQISALAE-----KNGVDQETAARELLSEKQPSLQF-VTPEQL 231

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
              A++LASD +  I+G  + VDGG+T
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGGWT 258

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  174 bits (441), Expect = 6e-54
 Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 22/270 (8%)

Query: 10  YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTY 68
           YK LEGK+ ++TG + G+G++    F    AKVV+          ++ + +         
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  DV++E D+ NL+   I + G+LD++ NNAG+    S H    +   ++++ +I  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH----EMSLSDWNKVIDTNL 117

Query: 129 RGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
            GA LG + A K  V     G +I+ +SV   +       Y  SK  +  +T+  A E  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             GIRVN I P  + T +    +              E+   +E ++       G   + 
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFAD-----------PEQRADVESMI-----PMGYIGEP 221

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFT 277
            +IA  A +LAS E+ Y++G  L  DGG T
Sbjct: 222 EEIAAVAAWLASSEASYVTGITLFADGGMT 251

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  172 bits (438), Expect = 8e-54
 Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 28/265 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L GK  +VTG A GIG A + LF + GA +V  D ++        +L +       +  D
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE---AIAVVAD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           VS  + ++ +    + + GRL  + + AGV  +        +     ++ ++R+N+ G+ 
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE----AWEKVLRVNLTGSF 115

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
           L  + A +V+    S  +  + +    +G  G   Y   K  +VGL +  A EL + G+R
Sbjct: 116 LVARKAGEVLEEGGSLVLTGSVAG---LGAFGLAHYAAGKLGVVGLARTLALELARKGVR 172

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VN + P  + T M         +      P                   G   +  ++A+
Sbjct: 173 VNVLLPGLIQTPMTAGLPPWAWEQEVGASPL------------------GRAGRPEEVAQ 214

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
           AAL+L S+ES YI+G  L VDGG +
Sbjct: 215 AALFLLSEESAYITGQALYVDGGRS 239

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 62/252 (24%), Positives = 94/252 (37%), Gaps = 18/252 (7%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           K++ G+I ++TG   GIG  T   F K  +K+V+ DI+       A         V    
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D S  +DI +      ++ G + IL NNA           +      + +    +NV  
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILVNNA----GVVYTSDLFATQDPQIEKTFEVNVLA 118

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY- 189
                K     M     G I++ AS A  +      AY  SK A VG  K    EL    
Sbjct: 119 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 178

Query: 190 --GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             G++  C+ P  V T  + N          S  P  E EE +  L+ G+   +    K 
Sbjct: 179 ITGVKTTCLCPNFVNTGFIKNP-------STSLGPTLEPEEVVNRLMHGILTEQ----KM 227

Query: 248 RDIAEAALYLAS 259
             I  +  +L +
Sbjct: 228 IFIPSSIAFLTT 239

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  169 bits (430), Expect = 1e-52
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 24/264 (9%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVS 74
            + +VTG +RGIG+A      K G KV++     A     ++  + +          DVS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E D++ ++   I   G +D++ NN       ++   +     +++D +I +N+ G  L 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN----AGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
            + A K+M+ +R G II+ ASV  L+G +G   Y  +K  ++G +K  A E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177

Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
            + P  +A+ M     +  E  +    P                   G T +  ++A   
Sbjct: 178 VVCPGFIASDMTAKLGEDMEKKILGTIPL------------------GRTGQPENVAGLV 219

Query: 255 LYLA-SDESKYISGHNLVVDGGFT 277
            +LA S  + YI+G    +DGG  
Sbjct: 220 EFLALSPAASYITGQAFTIDGGIA 243

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  166 bits (421), Expect = 5e-51
 Identities = 53/272 (19%), Positives = 88/272 (32%), Gaps = 36/272 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-VTYLHC 71
           L  K  I      GIG  T R  VK   K  +         ALA+    +  + +T+   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 72  DVSL-EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           DV++   + + L+     +   +DIL N AG              D ++ +  I IN  G
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG------------ILDDHQIERTIAINFTG 110

Query: 131 AALGMKYAAKVMVPR---RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG 187
                         R     G I +  SV           Y+ SK A+V  T + A    
Sbjct: 111 LVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP 170

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
             G+    I+P    T +           + +     + E ++ EL+     L   T  +
Sbjct: 171 ITGVTAYSINPGITRTPL-----------VHTFNSWLDVEPRVAELL-----LSHPTQTS 214

Query: 248 RDIAEAALYLASDESKYISGHNLVVDGGFTTS 279
               +  +          +G    +D G   +
Sbjct: 215 EQCGQNFVKAIEA---NKNGAIWKLDLGTLEA 243

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  165 bits (419), Expect = 8e-51
 Identities = 79/268 (29%), Positives = 118/268 (44%), Gaps = 15/268 (5%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           L+GK A++TG ARGIG A    +V+ GA+V IADI+  A  A A  +    P    +  D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALD 59

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+ +  I   +   + + G +DIL NN            I +     +D +  INV G  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNN----AALFDLAPIVEITRESYDRLFAINVSGTL 115

Query: 133 LGMKYAAKVMVPRRSGCIIS-TASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGI 191
             M+  A+ M+    G  I   AS A   G      Y  +K A++ LT++    L ++GI
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
            VN I+P  V             D      P  E++ ++   V       G   +A D+ 
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFAD--YENLPRGEKKRQVGAAV-----PFGRMGRAEDLT 228

Query: 252 EAALYLASDESKYISGHNLVVDGGFTTS 279
             A++LA+ E+ YI      VDGG   S
Sbjct: 229 GMAIFLATPEADYIVAQTYNVDGGNWMS 256

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  165 bits (419), Expect = 8e-51
 Identities = 75/263 (28%), Positives = 111/263 (42%), Gaps = 12/263 (4%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           K+A+VTG  +GIG+A     VK G  V IAD +DA   A+A  +  +      +  DVS 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA-LG 134
              +   +       G  D++ NNAG     +    I        D +  INV+G     
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAG----VAPSTPIESITPEIVDKVYNINVKGVIWGI 117

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
                        G II+  S A  +G      Y+ SK A+ GLT+  A +L   GI VN
Sbjct: 118 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 177

Query: 195 CISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA 254
              P  V T M     +   +   +GKP      +  + +       G   +  D+A   
Sbjct: 178 GYCPGIVKTPMWAEIDRQVSE--AAGKPLGYGTAEFAKRI-----TLGRLSEPEDVAACV 230

Query: 255 LYLASDESKYISGHNLVVDGGFT 277
            YLAS +S Y++G +L++DGG  
Sbjct: 231 SYLASPDSDYMTGQSLLIDGGMV 253

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  164 bits (415), Expect = 3e-50
 Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 21/267 (7%)

Query: 13  LEGKIAIVTG--GARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           L GK A+V G    R +G A      + GA+V ++   +      A+ L  +        
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR-PEAEKLAEALGGALLFR 64

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DV+ ++++  L        G LD L +       ++      D    ++   + ++   
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
                + A  ++  R  G I++    AS       +   ++K A+    +  A ELG  G
Sbjct: 125 LVAVARRAEPLL--REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKG 182

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           +RVN IS   V               +       +   +   L R         +   ++
Sbjct: 183 VRVNAISAGPV--------RTVAARSIPGFTKMYDRVAQTAPLRRN--------ITQEEV 226

Query: 251 AEAALYLASDESKYISGHNLVVDGGFT 277
               L+L S  +  I+G  + VD G+ 
Sbjct: 227 GNLGLFLLSPLASGITGEVVYVDAGYH 253

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  162 bits (411), Expect = 8e-50
 Identities = 53/265 (20%), Positives = 100/265 (37%), Gaps = 36/265 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
           +  K  +V   +RGIG A   +  + GA+V I   ++                  Y+ CD
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH---------RYVVCD 52

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           +         +++   K   +DIL  NA       K     +    +F   I        
Sbjct: 53  LR------KDLDLLFEKVKEVDILVLNA----GGPKAGFFDELTNEDFKEAIDSLFLNMI 102

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
             ++     M  +  G I++  S + +      +    ++ A+ G  K  + E+  YGI 
Sbjct: 103 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 162

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
           VNC++P    T  +                     E+ ++ V     ++ +  K  +IA 
Sbjct: 163 VNCVAPGWTETERVKELL----------------SEEKKKQVESQIPMRRM-AKPEEIAS 205

Query: 253 AALYLASDESKYISGHNLVVDGGFT 277
              +L S+++ Y++G  +VVDGG +
Sbjct: 206 VVAFLCSEKASYLTGQTIVVDGGLS 230

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  160 bits (405), Expect = 7e-49
 Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 33/263 (12%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              +  +VTGG RGIG A  +     G KV +      A   L             +  D
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------GVEVD 53

Query: 73  VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
           V+    +           G +++L +NA      S    +      +F+ +I  N+ GA 
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLVSNA----GLSADAFLMRMTEEKFEKVINANLTGAF 109

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIR 192
              + A++ M   + G +I   SV+ L G      Y  SK  ++G+ ++ A EL K  + 
Sbjct: 110 RVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVT 169

Query: 193 VNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE 252
            N ++P  + T M     +  +       P                          ++A 
Sbjct: 170 ANVVAPGYIDTDMTRALDERIQQGALQFIPA------------------KRVGTPAEVAG 211

Query: 253 AALYLASDESKYISGHNLVVDGG 275
              +LAS+++ YISG  + VDGG
Sbjct: 212 VVSFLASEDASYISGAVIPVDGG 234

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  156 bits (394), Expect = 6e-47
 Identities = 64/281 (22%), Positives = 108/281 (38%), Gaps = 37/281 (13%)

Query: 18  AIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSP-----LVTYLHC 71
           A++TGGAR IG +      + G +VV+     + A   L   L ++           L  
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 72  DVSLEQDIQNLINVTISKHGRLDILFNNAGVL-------GNQSKHKSITDFDANEFDNII 124
             SL    +++I+ +    GR D+L NNA          G+ +   +       +   + 
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 123

Query: 125 RINVRGAALGMKYAAKVMVPRRSGCIISTA-----SVASLMGGLGPHAYTVSKHAIVGLT 179
             N       ++  A+      +    + +        + +   G   YT++KHA+ GLT
Sbjct: 124 GSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLT 183

Query: 180 KNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN 239
           +  A EL    IRVN ++P        +                   +E  EE  R +  
Sbjct: 184 RAAALELAPRHIRVNAVAPGLSLLPPAMP------------------QETQEEYRRKVP- 224

Query: 240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
           L      A  IA+A  +L S ++ YI+G  L VDGG   ++
Sbjct: 225 LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 265

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  154 bits (391), Expect = 9e-47
 Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 40/269 (14%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAK-------VVIADIDDAAGIALADSLLSSSPLVTY 68
            I ++TG  +GIG A    F +           +V++    A    ++    +   L   
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 69  LHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
           +  D+S   D++ L    + ++G +D L NN        +  +++D    +FD  +  N+
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNN----AGVGRFGALSDLTEEDFDYTMNTNL 117

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGK 188
           +G     +    +M  + SG I    SVA+         Y +SK    GL +       K
Sbjct: 118 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 177

Query: 189 YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR 248
             +R+  + P  V T M                       K+++ ++ L       +   
Sbjct: 178 CNVRITDVQPGAVYTPMW---------------------GKVDDEMQALM------MMPE 210

Query: 249 DIAEAALYLASDESKYISGHNLV--VDGG 275
           DIA   +      S+ +    ++    G 
Sbjct: 211 DIAAPVVQAYLQPSRTVVEEIILRPTSGD 239

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  153 bits (387), Expect = 3e-46
 Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 38/268 (14%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           + A+VTGGA G+G A        G +VV+ D+       +             +  DV+ 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIY------------VEGDVTR 49

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
           E+D++  +     +   L  + + AGV   +             F  ++ +N+ G    +
Sbjct: 50  EEDVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 136 KYAAKV------MVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           + AA            + G I++TASVA+  G +G  AY  SK  +V LT   A EL  +
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 168

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           GIRV  ++P    T +L    +  +  + +  P                       +  +
Sbjct: 169 GIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVP-----------------FPPRLGRPEE 211

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFT 277
            A   L++  +    ++G  + +DG   
Sbjct: 212 YAALVLHILEN--PMLNGEVVRLDGALR 237

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  145 bits (367), Expect = 5e-43
 Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 22/270 (8%)

Query: 13  LEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           L GK  +VTG A    I     +   + GA++     +D       +   +       L 
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRVEEFAAQLGSDIVLQ 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANE-FDNIIRINVR 129
           CDV+ +  I  +         + D   ++ G            +    E F     I+  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
                 K    ++ P  +  +++ + + +       +   ++K ++    +  A  +G  
Sbjct: 122 SFVAMAKACRSMLNPGSA--LLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           G+RVN IS   + T                        E +  + R        T+   D
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFR--------KMLAHCEAVTPIRR--------TVTIED 223

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTS 279
           +  +A +L SD S  ISG  + VDGGF+ +
Sbjct: 224 VGNSAAFLCSDLSAGISGEVVHVDGGFSIA 253

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  145 bits (367), Expect = 5e-43
 Identities = 54/271 (19%), Positives = 104/271 (38%), Gaps = 28/271 (10%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVK---HGAKVVIADIDDAAGIALADSLLSSSP--LVT 67
           L   + ++TG +RG G A      +    G+ ++++   ++    L + L +  P   V 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 68  YLHCDVSLEQDIQNLINVTIS----KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNI 123
               D+  E  +Q L++        +  +  +L NNA  LG+ SK   +   D  E +N 
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSK-GFLNVNDLAEVNNY 122

Query: 124 IRINVRGAALGMKYAAKVM--VPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKN 181
             +N+                 P  S  +++ +S+ +L    G   Y   K A   L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 182 TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLK 241
            A E  +  +RV   +P  +   M   A ++ +D         E   K+++L        
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKD--------PELRSKLQKLKS-----D 227

Query: 242 GVTLKARDIAEAALYLASDESKYISGHNLVV 272
           G  +     A+  L L   ++ + SG ++  
Sbjct: 228 GALVDCGTSAQKLLGLLQKDT-FQSGAHVDF 257

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 8e-42
 Identities = 47/258 (18%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYL 69
           + L+GK  IVTG ++GIG        K GA VV+          +    L   +    Y+
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
              +      +  +       G LD+L  N       +   ++   D +     + +N  
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT----NTSLNLFHDDIHHVRKSMEVNFL 125

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG-- 187
              +    A  ++  + +G I+  +S+A  +      AY+ SK A+ G   +   E    
Sbjct: 126 SYVVLTVAALPML-KQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 184

Query: 188 KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA 247
           +  + +       + T   + A                +EE   E+++G A  +      
Sbjct: 185 RVNVSITLCVLGLIDTETAMKAVSG-----IVHMQAAPKEECALEIIKGGALRQEEV--Y 237

Query: 248 RDIAEAALYLASDESKYI 265
            D +     L  + S+ I
Sbjct: 238 YDSSLWTTLLIRNPSRKI 255

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 1e-40
 Identities = 60/268 (22%), Positives = 102/268 (38%), Gaps = 26/268 (9%)

Query: 11  KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           ++++G +A++TGGA G+G AT    V  GA  V+ D+ ++ G A A  L ++        
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
                 Q    L      +          A         K        +F  ++ +N+ G
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMG 119

Query: 131 AALGMKYAAKVMVPR------RSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTAC 184
               ++  A  M         + G II+TASVA+  G +G  AY+ SK  IVG+T   A 
Sbjct: 120 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 179

Query: 185 ELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVT 244
           +L   GIRV  I+P    T +L +                   EK+   +          
Sbjct: 180 DLAPIGIRVMTIAPGLFGTPLLTSLP-----------------EKVCNFLASQVPFPSRL 222

Query: 245 LKARDIAEAALYLASDESKYISGHNLVV 272
               + A     +    + +++G  + +
Sbjct: 223 GDPAEYAHLVQAIIE--NPFLNGEVIRL 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 6e-40
 Identities = 43/261 (16%), Positives = 81/261 (31%), Gaps = 16/261 (6%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADI------DDAAGIALADSLLSSSPLVTYL 69
            + ++TG + GIG           ++                    A +L      +  L
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             DV   + +                  +             +     +   +++ +NV 
Sbjct: 63  QLDVRDSKSVAAARERVTEGR------VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVV 116

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
           G    ++     M  R SG ++ T SV  LMG      Y  SK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           G+ ++ I    V T+ +     S E+ +D            + L       +       +
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI-HTFHRFYQYLAHSKQVFREAAQNPEE 235

Query: 250 IAEAALYLASDES---KYISG 267
           +AE  L          +Y + 
Sbjct: 236 VAEVFLTALRAPKPTLRYFTT 256

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  136 bits (342), Expect = 1e-39
 Identities = 38/269 (14%), Positives = 78/269 (28%), Gaps = 43/269 (15%)

Query: 14  EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV 73
           E +  +V GG   +G   V+ F      V   D+         +   S+S +V       
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV-------ENEEASASVIVKMTDSFT 53

Query: 74  SLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAAL 133
                +   +   +    ++D +   A   G  +   + +       D + + ++  + +
Sbjct: 54  EQADQVTAEV-GKLLGDQKVDAILCVA---GGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 109

Query: 134 GMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELG--KYGI 191
               A K +       +    + A+L G  G   Y ++K A+  L ++ A +      G 
Sbjct: 110 SSHLATKHLKEGGLLTLAG--AKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 167

Query: 192 RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
               + P  + T M   +                 E                      + 
Sbjct: 168 AAIAVLPVTLDTPMNRKSM---------------PEADFSSWT-----------PLEFLV 201

Query: 252 EAALYLASDESKYISGHNLVV--DGGFTT 278
           E      +   +  SG  + V    G T 
Sbjct: 202 ETFHDWITGNKRPNSGSLIQVVTTDGKTE 230

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  134 bits (338), Expect = 1e-38
 Identities = 51/280 (18%), Positives = 100/280 (35%), Gaps = 50/280 (17%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
            I +++G A GIG AT ++    G ++V  DI DA                  +  D+S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLST 44

Query: 76  EQDIQNLI-NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR--------- 125
            +  +  I +V       +D L   AG+        ++   +      ++          
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104

Query: 126 -------INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPH-AYTVSKHAIVG 177
                  I+   +A        + +   +G      ++    G  G + AY  SK+A+  
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTV 164

Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL 237
             +  A   G+ G+R+N I+P    T +L                  ++    E + + +
Sbjct: 165 AVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL--------------QDPRYGESIAKFV 210

Query: 238 ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
             +     +  ++A    +L S  + Y+ G  +V+DGG  
Sbjct: 211 PPMGRRA-EPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 2e-37
 Identities = 55/300 (18%), Positives = 96/300 (32%), Gaps = 87/300 (29%)

Query: 16  KIAIVTGGARGIGEATVRLFVK-HGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
            +A+VTGG +GIG A VR   +     VV+   D   G A    L +      +   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
             Q I+ L +    ++G LD+L NNAG+    +   +       + +  ++ N  G    
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGI----AFKVADPTPFHIQAEVTMKTNFFGTRDV 119

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMG--------------------------------- 161
                 ++  +  G +++ +S+ S+                                   
Sbjct: 120 CTELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 177

Query: 162 --------GLGPHAYTVSKHAIVGLTKNTACELGKY----GIRVNCISPFGVATSMLVNA 209
                   G    AY V+K  +  L++  A +L +      I +N   P  V T M    
Sbjct: 178 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 237

Query: 210 WKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLA--SDESKYISG 267
                                             T    + AE  +YLA    +++   G
Sbjct: 238 A---------------------------------TKSPEEGAETPVYLALLPPDAEGPHG 264

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  128 bits (322), Expect = 3e-36
 Identities = 47/268 (17%), Positives = 97/268 (36%), Gaps = 21/268 (7%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           L+GK  ++ G A  + I     +     GA +    ++++        +           
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRVRPIAQELNSPYVYE 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            DVS E+  ++L N      G LD + ++      ++   S+ +   + F+  + I+V  
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             L         +      +++ + + S       +   ++K A+    +  A +LGK+ 
Sbjct: 122 --LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHH 179

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
           IRVN +S   + T                      +   + +     A L+   +   ++
Sbjct: 180 IRVNALSAGPIRTLASSGIA---------------DFRMILKWNEINAPLRKN-VSLEEV 223

Query: 251 AEAALYLASDESKYISGHNLVVDGGFTT 278
             A +YL S  S  +SG    VD G+  
Sbjct: 224 GNAGMYLLSSLSSGVSGEVHFVDAGYHV 251

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  124 bits (311), Expect = 1e-34
 Identities = 53/299 (17%), Positives = 95/299 (31%), Gaps = 54/299 (18%)

Query: 17  IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSP----------- 64
           +A+VTG A+ +G +        G  V +     AA   AL+ +L +  P           
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 65  -------LVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQS---------- 107
                          V+L      L+    +  GR D+L NNA                 
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 108 KHKSITDFDANEFDNIIRINVRGA------ALGMKYAAKVMVPRRSGCIISTASVASLMG 161
                 +       ++   N                         +  II+     +   
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 162 GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGK 221
            LG   YT++K A+ GLT++ A EL                        +          
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQ-------------------IRVNGVGPGLSV 224

Query: 222 PCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK 280
             ++    + E  R    L      A ++++  ++L S ++KYI+G  + VDGG++ ++
Sbjct: 225 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 283

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  123 bits (308), Expect = 2e-34
 Identities = 52/270 (19%), Positives = 96/270 (35%), Gaps = 10/270 (3%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYL 69
           L+GK  +V+G      I     R+  + GA++V+   D    I  + D L + +PL+   
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 70  HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVR 129
             +      +   +   I    +LD + ++ G +        I  F    + ++ +    
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMG--INPFFDAPYADVSKGIHI 121

Query: 130 GAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKY 189
            A      A  ++     G  I              +  TV+K A+  + +  A E GKY
Sbjct: 122 SAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 181

Query: 190 GIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD 249
           G+R N ++   + T  +                   + + +EE     A +      A  
Sbjct: 182 GVRSNLVAAGPIRTLAMSAIVGGALGEE-----AGAQIQLLEEGWDQRAPIGWNMKDATP 236

Query: 250 IAEAALYLASDESKYISGHNLVVDGGFTTS 279
           +A+    L SD     +G  +  DGG  T 
Sbjct: 237 VAKTVCALLSDWLPATTGDIIYADGGAHTQ 266

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  121 bits (303), Expect = 1e-33
 Identities = 44/215 (20%), Positives = 72/215 (33%), Gaps = 28/215 (13%)

Query: 13  LEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLH 70
           +     +VTG  RGIG   V+  VK      ++    D      L     S    V  L 
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR---VHVLP 57

Query: 71  CDVSLEQDIQNLINVTISKHGR--LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINV 128
             V+ ++ +   ++      G   L +L NNAGVL +   + + T+ +       + +N 
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS---YGTNTEPNRAVIAEQLDVNT 114

Query: 129 RGAALGMKYAAKVMVPRRSGCIISTASV------------------ASLMGGLGPHAYTV 170
               L  +    ++    S       SV                   S        AY +
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM 205
           SK AI    +  A +L    + V    P  V T++
Sbjct: 175 SKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  115 bits (289), Expect = 9e-32
 Identities = 46/266 (17%), Positives = 86/266 (32%), Gaps = 47/266 (17%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           GK+ IV GG   +G A +  F K+G  V+  D+                     +  + +
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN----------ILVDGNKN 51

Query: 75  LEQDIQNLINVTIS--KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAA 132
             +  Q+++  T S  +  ++D +F  A   G  +   + +       D +I+ +V  +A
Sbjct: 52  WTEQEQSILEQTASSLQGSQVDGVFCVA---GGWAGGSASSKDFVKNADLMIKQSVWSSA 108

Query: 133 LGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG-- 190
           +  K        +  G +  T + A++        Y ++K A+  LT + A +       
Sbjct: 109 IAAKL--ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN 166

Query: 191 IRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI 250
             V  I P  + T M                                            I
Sbjct: 167 SAVLTIMPVTLDTPMNRKWM---------------PNADHSSWT-----------PLSFI 200

Query: 251 AEAAL-YLASDESKYISGHNLVVDGG 275
           +E  L +     S+  SG  L +   
Sbjct: 201 SEHLLKWTTETSSRPSSGALLKITTE 226

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  102 bits (255), Expect = 1e-26
 Identities = 51/279 (18%), Positives = 90/279 (32%), Gaps = 56/279 (20%)

Query: 16  KIAIVTGGARGIGEATVRLFV---KHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCD 72
              ++TG  RG+G   V+  +   +    +     +      L D L  +   +  L  D
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEID 61

Query: 73  VSLEQDIQNLINVT--ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           +        L+     ++K   L++LFNNAG+     K   IT   + E  + ++ N   
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI---APKSARITAVRSQELLDTLQTNTVV 118

Query: 131 AALGMKYAAKVMVPRRS-----------GCIISTASVASLMGGL---GPHAYTVSKHAIV 176
             +  K    ++                  II+ +S+   + G    G +AY  SK A+ 
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178

Query: 177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
             TK+ + +L    I    + P  V T M             S  P +            
Sbjct: 179 AATKSLSVDLYPQRIMCVSLHPGWVKTDM-----------GGSSAPLDVPTS-------- 219

Query: 237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG 275
                        I +    L   +    +G  +  DG 
Sbjct: 220 ----------TGQIVQTISKLGEKQ----NGGFVNYDGT 244

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (252), Expect = 8e-26
 Identities = 46/326 (14%), Positives = 96/326 (29%), Gaps = 67/326 (20%)

Query: 15  GKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALAD--------------- 57
             I  + G     G G    +   K   K++         I + +               
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 58  -----------------SLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNA 100
                            +             ++     I+++ N+   K+G++++L ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 101 GVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM 160
                +   K + +     + + +  +       +      ++  +S  I  T   +  +
Sbjct: 122 AN--AKEVQKDLLNTSRKGYLDALSKSSYSLIS-LCKYFVNIMKPQSSIISLTYHASQKV 178

Query: 161 GGLGPHAYTVSKHAIVGLTKNTACELG-KYGIRVNCISPFGVATSM-------------- 205
                   + +K A+   T+  A  LG  Y IR+N IS   + +                
Sbjct: 179 VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN 238

Query: 206 --------------LVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA 251
                         ++N     E+   S        +   E     A L+     + DI 
Sbjct: 239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKL-LSTDIG 297

Query: 252 EAALYLASDESKYISGHNLVVDGGFT 277
             A +L S ES+ I+G  + VD G  
Sbjct: 298 SVASFLLSRESRAITGQTIYVDNGLN 323

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 97.9 bits (242), Expect = 2e-24
 Identities = 48/301 (15%), Positives = 81/301 (26%), Gaps = 54/301 (17%)

Query: 13  LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS------- 63
           L GK A + G A   G G A  +     GA++++     A  I                 
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 64  -------------------------PLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFN 98
                                     +        S    +Q          G +DIL +
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 99  NAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS 158
           +       SK    T                 +   +      ++      I  T   + 
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVS---LLSHFLPIMNPGGASISLTYIASE 182

Query: 159 LMGGLGPHAYTVSKHAIVGLTKNTACELGKYG-IRVNCISPFGVATSMLVNAWKSCEDCM 217
            +        + +K A+   T+  A E G+   IRVN                 +     
Sbjct: 183 RIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT--------------ISAGPLGS 228

Query: 218 DSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT 277
            + K     +  +E            TL A ++  AA +L S  +  I+G  + VD G  
Sbjct: 229 RAAKAIGFIDTMIEYSYNNAP--IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286

Query: 278 T 278
           +
Sbjct: 287 S 287

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 77.8 bits (190), Expect = 8e-18
 Identities = 23/194 (11%), Positives = 55/194 (28%), Gaps = 5/194 (2%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
           ++A++ GG   +G+         G ++V+    +    A A      +   +        
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             +  ++  +TI     +D   +      N  + K +                       
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDL----KNILREKIVVSPLVPVSRGAKGFTYSSERSAA 116

Query: 136 KYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNC 195
           +  A+V+   +    + T   A          + V        +K     L      +  
Sbjct: 117 EIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRP 176

Query: 196 ISPFGVATSMLVNA 209
           +    ++ S LV +
Sbjct: 177 LDAGPLSNSRLVES 190

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 74.2 bits (181), Expect = 1e-16
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 16/186 (8%)

Query: 6   EKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL 65
            K A  +++GK A+V  G   +G  +  L    GA+VV+         A ADS+ +    
Sbjct: 14  VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV-NKRFK 72

Query: 66  VTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIR 125
           V     + + +      +            +F    +         +       + N   
Sbjct: 73  VNVTAAETADDASRAEAV-------KGAHFVFTAGAI--------GLELLPQAAWQNESS 117

Query: 126 INVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACE 185
           I +              +             A    G+G     + +  I  L +++   
Sbjct: 118 IEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGV 177

Query: 186 LGKYGI 191
                I
Sbjct: 178 FDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 72.7 bits (177), Expect = 1e-15
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 17/199 (8%)

Query: 15  GKIAIVTGGARGIGEATVRLFVKHGAKVVI----ADIDDAAGIALADSLLSSSPLVTYLH 70
               +VTGG  G+G    R   + GA  ++    +  D      L   L +     T   
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
           CDV+  + ++ L+           +    A +        +    +      +       
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKV------- 121

Query: 131 AALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYG 190
             LG +   ++         +  +S AS  G  G   Y      + GL    A +    G
Sbjct: 122 --LGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDG 175

Query: 191 IRVNCISPFGVATSMLVNA 209
           +    ++    A S +   
Sbjct: 176 LPATAVAWGTWAGSGMAEG 194

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 4e-06
 Identities = 20/197 (10%), Positives = 46/197 (23%), Gaps = 20/197 (10%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
            +A++TG     G       ++ G +V       ++        L  +P           
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 76  EQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGM 135
             D+ +           + I+             +S      +  +    ++  G    +
Sbjct: 62  YGDLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114

Query: 136 KYAAKVMVPRRSGCI-ISTASVASLMGG--------LGPH-AYTVSKHAIVGLTKNTACE 185
                  +         ST+ +   +            P   Y  +K     +  N    
Sbjct: 115 DAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR-- 172

Query: 186 LGKYGIRVNCISPFGVA 202
              Y +       F   
Sbjct: 173 -EAYNLFAVNGILFNHE 188

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 41.6 bits (96), Expect = 6e-05
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSL 75
          K+ ++TGG   +G       +  G  +++ D     G       LSS     ++H D+  
Sbjct: 2  KL-LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 76 EQDIQNLIN 84
          + D+  LI 
Sbjct: 61 KNDVTRLIT 69

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 41.3 bits (96), Expect = 7e-05
 Identities = 25/203 (12%), Positives = 63/203 (31%), Gaps = 35/203 (17%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-----ALADSLLSSSPLVTYLH 70
           K+A++TG     G       ++ G +V       ++        +     + +P     +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 71  CDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRG 130
            D+S   ++  ++     +  + D ++N   +       +S              ++  G
Sbjct: 62  GDLSDTSNLTRIL-----REVQPDEVYNLGAMSHVAVSFESPEYT--------ADVDAMG 108

Query: 131 AALGMKYAAKVMVPRRSGCI-ISTASV-----------ASLMGGLGPHAYTVSKHAIVGL 178
               ++    + + +++     ST+ +            +      P  Y V+K     +
Sbjct: 109 TLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP--YAVAKLYAYWI 166

Query: 179 TKNTACELGKYGIRVNCISPFGV 201
           T N       YG+       F  
Sbjct: 167 TVNYR---ESYGMYACNGILFNH 186

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 8e-05
 Identities = 32/194 (16%), Positives = 71/194 (36%), Gaps = 10/194 (5%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVS 74
           KI +VTGGA  IG  TV   +++G   V+AD + ++   ++A   + +   + +   D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
             + ++      + K  ++D + + AG+       +    +  N     + +        
Sbjct: 62  DRKGLEK-----VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN 116

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGG--LGPH-AYTVSKHAIVGLTKNTACELGKYGI 191
           +            G      ++  +     LGP   Y  +K+AI  +  +      K   
Sbjct: 117 VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILND-LYNSDKKSW 175

Query: 192 RVNCISPFGVATSM 205
           +   +  F    + 
Sbjct: 176 KFAILRYFNPIGAH 189

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.9 bits (95), Expect = 1e-04
 Identities = 42/213 (19%), Positives = 70/213 (32%), Gaps = 44/213 (20%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIA-DIDDAAGIALADSLLSSSPLVTYLHCDVS 74
           KI ++TGGA  IG A VR  +K+    V+  D    AG   + S +S S    + H D+ 
Sbjct: 2   KI-LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
              +I  +      +  + D + + A         +SIT   A      I  N+ G    
Sbjct: 61  DSAEITRIF-----EQYQPDAVMHLAAESHV---DRSITGPAA-----FIETNIVGTYAL 107

Query: 135 MKYAAKVMVP----RRSGCIISTASVASLMGGLGPH----------------------AY 168
           ++ A K        +++       S   + G L                          Y
Sbjct: 108 LEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPY 167

Query: 169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGV 201
           + SK +   L +        YG+     +    
Sbjct: 168 SASKASSDHLVRAWR---RTYGLPTIVTNCSNN 197

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 11/59 (18%), Positives = 22/59 (37%)

Query: 16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
          + A+VTG     G    +L ++ G +V       ++        L     + Y   D++
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA 59

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 8/74 (10%)

Query: 1  MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL 60
          +N       ++   GK   VTG     G          GA V    +  A  +       
Sbjct: 1  IN----NSFWQ---GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-TAPTVPSLFETA 52

Query: 61 SSSPLVTYLHCDVS 74
            +  +     D+ 
Sbjct: 53 RVADGMQSEIGDIR 66

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 9/187 (4%)

Query: 16  KIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVS 74
           ++ +VTGG+  IG  T    +++G  V+I D + ++    L           T++  D+ 
Sbjct: 2   RV-LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 75  LEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG 134
            E  +       I     +D + + AG+       +   ++  N  +  +R+     A  
Sbjct: 61  NEALMTE-----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN 115

Query: 135 MKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVN 194
           +K           G       V S   G     Y  SK  +  +  +      +    + 
Sbjct: 116 VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKA--QPDWSIA 173

Query: 195 CISPFGV 201
            +  F  
Sbjct: 174 LLRYFNP 180

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 1  MNLNTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD 46
          M+   E +     + K+ ++TG A  IG   +   +K   KVV  D
Sbjct: 2  MSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLD 47

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG------IALADSLLSSSPLVTYL 69
          KIA++TG     G       +  G +V       +            D    +  L+   
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 70 HCDVSLEQDIQNLIN 84
          + D++    ++  I+
Sbjct: 62 YADLTDASSLRRWID 76

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 38.6 bits (88), Expect = 5e-04
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP--LVTYLHC 71
          EG + +VTG    +    V   ++HG KV       +    L     +  P    T +  
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 72 DVSLEQDIQN 81
          D+  +     
Sbjct: 70 DMLKQGAYDE 79

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.5 bits (82), Expect = 0.003
 Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 3/88 (3%)

Query: 15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVS 74
          G   +V GG    G AT     K   +V I D            L S +P+ +       
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 75 LEQDIQ---NLINVTISKHGRLDILFNN 99
           +        L    I     L   F +
Sbjct: 61 WKALTGKSIELYVGDICDFEFLAESFKS 88

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.1 bits (82), Expect = 0.003
 Identities = 29/239 (12%), Positives = 64/239 (26%), Gaps = 21/239 (8%)

Query: 4   NTEKKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS 63
             E++ Y   E     +TG    I     R     G  V+ +D          + +    
Sbjct: 4   ELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK------NEHMTEDM 57

Query: 64  PLVTYLHCDVSLEQDIQNL------INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDA 117
               +   D+ + ++   +      +    +  G +  + +N  V+   +   S    +A
Sbjct: 58  FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEA 117

Query: 118 NEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVG 177
              + I R     +A       ++     S                   A+ + K A   
Sbjct: 118 ARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ------DAFGLEKLATEE 171

Query: 178 LTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG 236
           L K+       +GI         +            +      +  +   ++ E    G
Sbjct: 172 LCKHYN---KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 227

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	285
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.98
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.74
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.73
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.72
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.68
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.68
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.67
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.67
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.67
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.65
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.63
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.63
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.6
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.59
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.58
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.57
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.29
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.29
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.25
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.19
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.16
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.11
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.1
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.05
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.14
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.08
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.06
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.04
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.88
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.87
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.84
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.8
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.73
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.68
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.62
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.58
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.57
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.56
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.48
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.44
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.41
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.39
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.33
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.31
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.28
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.22
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.16
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.12
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.06
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.01
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.99
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.98
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.97
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.92
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.86
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.84
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.84
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.84
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.83
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.83
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.8
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.76
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.75
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.74
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.67
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.62
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.61
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.6
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.58
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.56
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.56
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.55
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.53
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.53
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.51
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.5
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.49
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.41
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.38
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.37
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.3
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.25
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.19
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.15
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.13
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.09
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.02
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.97
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.9
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.9
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.75
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.72
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.68
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.66
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.65
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.48
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.47
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.44
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.34
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.32
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.23
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.23
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.09
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.04
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.01
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.88
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.87
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.82
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.78
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.74
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.61
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.58
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.53
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.32
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.15
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.07
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.01
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.98
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.95
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.88
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.84
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.62
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.62
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.52
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.46
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.45
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.28
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.19
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.17
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.15
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.12
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.9
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.81
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.72
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.65
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.64
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.49
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.44
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.35
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.19
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.13
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.13
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.96
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.72
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.67
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.64
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.55
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.34
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.28
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.28
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.26
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.24
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.12
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.97
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.79
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.79
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.72
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.57
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	90.5
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.37
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.32
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.3
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.26
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.07
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.85
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.85
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.73
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.37
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.24
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.75
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	88.69
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.52
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.44
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.34
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.32
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.97
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.71
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.67
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	87.52
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.5
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.48
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.38
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	87.24
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.11
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	86.34
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.91
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	85.79
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	85.7
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.7
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	85.55
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	85.55
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.45
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	85.43
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.97
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.74
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.69
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	84.63
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.5
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.4
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	84.18
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.95
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	83.91
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.82
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	83.76
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	83.35
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.33
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.15
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	83.11
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.8
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	82.8
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	82.43
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.32
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.25
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.04
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	81.91
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.85
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	81.84
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	81.72
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	81.62
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	81.18
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.04
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	80.95
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	80.65
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	80.38
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.35
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	80.19
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	80.15

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2e-59  Score=398.11  Aligned_cols=256  Identities=27%  Similarity=0.341  Sum_probs=235.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.+++||++++++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             cC-CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           90 HG-RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++ ++|+||||||+...    .++.+.+.++|++.+++|+.+++.+.|+++|.|++++.|+||+++|..+..+.|+...|
T Consensus        83 ~~~~idilvnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  158 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIY----KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVY  158 (259)
T ss_dssp             TTTCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             hCCCceEEEECCceecc----CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccch
Confidence            87 79999999998644    68899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+|++|.|++++|||||+|+||+|+|++.+.....           ....+..+....  ..|++|+.+||
T Consensus       159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------~~~~~~~~~~~~--~~pl~R~g~pe  225 (259)
T d2ae2a_         159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD-----------PEQKENLNKLID--RCALRRMGEPK  225 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS-----------HHHHHHHHHHHH--TSTTCSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhc-----------hhhHHHHHHHHh--cCCCCCCcCHH
Confidence            99999999999999999999999999999999999998765433           223344444443  36889999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |+|++++||+|+.++|+|||+|.||||++...+|
T Consensus       226 dvA~~v~fL~S~~s~~itG~~i~VDGG~~a~~G~  259 (259)
T d2ae2a_         226 ELAAMVAFLCFPAASYVTGQIIYVDGGLMANCGF  259 (259)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSCC
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEECCCeEeeCCC
Confidence            9999999999999999999999999999998776

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.7e-59  Score=394.26  Aligned_cols=250  Identities=32%  Similarity=0.431  Sum_probs=228.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|.|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.+++||++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +|++|+||||||+...    .++ +.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++..+|+
T Consensus        86 ~g~iDilvnnAG~~~~----~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~  160 (255)
T d1fmca_          86 LGKVDILVNNAGGGGP----KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HSSCCEEEECCCCCCC----CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEeeeCCcCCCC----Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccch
Confidence            9999999999998644    444 78999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      +||+|+.+|+|+||.|++++|||||+|+||+|+|++....+.+               +..+....  ..|.+|+.+|||
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---------------e~~~~~~~--~~pl~R~g~ped  223 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---------------EIEQKMLQ--HTPIRRLGQPQD  223 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---------------HHHHHHHH--TCSSCSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH---------------HHHHHHHh--cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999998765332               22222222  368999999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|++++||+|+.++|+|||+|.||||+..+.|
T Consensus       224 vA~~v~fL~S~~s~~itG~~i~vDGG~~~~ln  255 (255)
T d1fmca_         224 IANAALFLCSPAASWVSGQILTVSGGGVQELN  255 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSCCCCC
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECcCccccCc
Confidence            99999999999999999999999999976543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=9.3e-59  Score=394.10  Aligned_cols=254  Identities=28%  Similarity=0.414  Sum_probs=227.9

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      |..||+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++.+.+.++.+++||++|+++++++++++.
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            345899999999999999999999999999999999999865 6777788888778899999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCc-eEEEEcccccccCCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSG-CIISTASVASLMGGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~ii~vss~~~~~~~~~~~  166 (285)
                      +++|+||+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|.+++.+ .|+++||..+..+.|+..
T Consensus        81 ~~~G~iDiLVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~  156 (261)
T d1geea_          81 KEFGKLDVMINNAGLENP----VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFV  156 (261)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCH
T ss_pred             HHhCCCCEeeccceecCC----cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccc
Confidence            999999999999998654    688999999999999999999999999999999877655 589999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      +|+++|+|+.+|+|+||.|++++|||||+|+||+|+|++....+..              ++.......  ..|++|+.+
T Consensus       157 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~pl~R~~~  220 (261)
T d1geea_         157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--------------PEQRADVES--MIPMGYIGE  220 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--------------HHHHHHHHT--TCTTSSCBC
T ss_pred             ccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC--------------HHHHHHHHh--cCCCCCCCC
Confidence            9999999999999999999999999999999999999998765432              122222222  358899999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |||+|++++||+|+.++|+|||+|.||||+++..++
T Consensus       221 pediA~~v~fL~S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         221 PEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCeeCCCCC
Confidence            999999999999999999999999999999996554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1e-58  Score=393.34  Aligned_cols=254  Identities=33%  Similarity=0.559  Sum_probs=227.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.+++||++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999999999999999888887653  4578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      |++|+||||||+....   .++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||+++|..+..+.|+...|++
T Consensus        82 G~iDiLVnnAG~~~~~---~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  158 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQ---NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  158 (258)
T ss_dssp             SCCSEEEECCCCCCCC---BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             CCCCEEEECCcccccC---CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHH
Confidence            9999999999986432   6788999999999999999999999999999999899999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+.+|+|+||.|++++|||||+|+||+|+|||....+....        .+...+..+....  ..|.+|+.+|||+
T Consensus       159 sKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~--------~~~~~~~~~~~~~--~~pl~R~~~p~dv  228 (258)
T d1iy8a_         159 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD--------PENPRKAAEEFIQ--VNPSKRYGEAPEI  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHC--------TTCHHHHHHHHHT--TCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcC--------cccHHHHHHHHHh--cCCCCCCcCHHHH
Confidence            99999999999999999999999999999999999886654311        0112233333333  3588999999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |++++||+|+.++|+|||+|.||||++.+
T Consensus       229 A~~v~fL~S~~s~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         229 AAVVAFLLSDDASYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHhCchhcCCcCceEEcCcchhcc
Confidence            99999999999999999999999999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-58  Score=390.19  Aligned_cols=248  Identities=31%  Similarity=0.465  Sum_probs=224.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+ .+.++.++++|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999999999999999988888754 3678999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~~Y  168 (285)
                      +|+||+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+. .+.++...|
T Consensus        81 ~g~iDiLVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y  156 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRR----HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAY  156 (251)
T ss_dssp             HSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHH
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccch
Confidence            9999999999998643    78999999999999999999999999999999999999999999997664 467788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+|+||.|++++|||||+|+||+|+|++.+..+..              .+..+....  ..|++|+.+||
T Consensus       157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~--------------~~~~~~~~~--~~pl~R~~~pe  220 (251)
T d1vl8a_         157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--------------PEKLDYMLK--RIPLGRTGVPE  220 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--------------HHHHHHHHH--TCTTSSCBCGG
T ss_pred             HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC--------------HHHHHHHHh--cCCCCCCCCHH
Confidence            99999999999999999999999999999999999998765432              122233333  36889999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+|++++|+|||+|.|||||+.
T Consensus       221 dvA~~v~fL~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         221 DLKGVAVFLASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEeCcCeeC
Confidence            999999999999999999999999999985

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.3e-59  Score=390.90  Aligned_cols=242  Identities=31%  Similarity=0.464  Sum_probs=223.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ||+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.+...+++|++++++++++++++.+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            689999999999999999999999999999999999999999988887   45688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++.++|++|
T Consensus        78 ~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  153 (243)
T d1q7ba_          78 EVDILVNNAGITRD----NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAA  153 (243)
T ss_dssp             SCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             Ccceehhhhhhccc----cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHH
Confidence            99999999998654    68899999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+|++|.||+++|||||+|+||+|+|++.+...+.                .......  ..|.+|+.+|||+|
T Consensus       154 Kaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----------------~~~~~~~--~~pl~R~~~pedvA  215 (243)
T d1q7ba_         154 KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD----------------QRAGILA--QVPAGRLGGAQEIA  215 (243)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH----------------HHHHHHT--TCTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh----------------HHHHHHh--cCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999998754321                2222222  35889999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+|++++|+|||+|.||||+++
T Consensus       216 ~~v~fL~S~~s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         216 NAVAFLASDEAAYITGETLHVNGGMYM  242 (243)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhCchhcCCcCCeEEECCCeEe
Confidence            999999999999999999999999876

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.1e-58  Score=391.77  Aligned_cols=248  Identities=29%  Similarity=0.442  Sum_probs=224.9

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +.+.+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.
T Consensus         3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCcc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++|++|+||||||....    .++.+.+.++|++.+++|+.+++.+.|+++|.|++++.|+||++||..+..+.++..+
T Consensus        83 ~~~g~iDilvnnag~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~  158 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRD----NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQAN  158 (251)
T ss_dssp             HHCSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH
T ss_pred             HhcCCceeeeeccccccc----cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHH
Confidence            999999999999998654    6788999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+|+||.|++++|||||+|+||+|+|++.....+                +..+....  ..|++|+.+|
T Consensus       159 Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~----------------~~~~~~~~--~~pl~R~~~p  220 (251)
T d2c07a1         159 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE----------------QIKKNIIS--NIPAGRMGTP  220 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH----------------HHHHHHHT--TCTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH----------------HHHHHHHh--cCCCCCCcCH
Confidence            99999999999999999999999999999999999999764321                22223333  3688999999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ||+|++++||+|++++|+|||+|.||||++
T Consensus       221 edvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         221 EEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence            999999999999999999999999999987

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.2e-58  Score=391.23  Aligned_cols=256  Identities=31%  Similarity=0.452  Sum_probs=215.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++.+ .+.++.++++|++|.++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999975 556667666644 35689999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      |++|+||||||+...    .++.+.+.++|++.|++|+.+++.++|+++|.|++++.|+||+++|..+..+.|+..+|++
T Consensus        82 G~iDiLVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  157 (260)
T d1x1ta1          82 GRIDILVNNAGIQHT----ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             SCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCcEEEeecccccC----CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhh
Confidence            999999999998654    6899999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+.+|+|++|.|++++|||||+|+||+|+|++..........     ......++...+.+.. ..|.+|+.+|||+
T Consensus       158 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~Pl~R~g~pedi  231 (260)
T d1x1ta1         158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE-----KNGVDQETAARELLSE-KQPSLQFVTPEQL  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHH-HCTTCCCBCHHHH
T ss_pred             hhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhh-----hcCCChHHHHHHHHHh-cCCCCCCcCHHHH
Confidence            999999999999999999999999999999999998765433111     0001111222222222 3688999999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++||||+.++|+|||+|.|||||+.
T Consensus       232 A~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         232 GGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhChhhCCCcCCEEEECcchhc
Confidence            9999999999999999999999999975

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.1e-58  Score=391.65  Aligned_cols=250  Identities=28%  Similarity=0.403  Sum_probs=202.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++.++.||++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             c-CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           90 H-GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      + |++|+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|
T Consensus        83 ~~g~idilvnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y  158 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRS----KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  158 (259)
T ss_dssp             HTTCCSEEEEECCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             hCCCcccccccccccCC----CchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccc
Confidence            8 689999999998754    68889999999999999999999999999999998889999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+.+|+|++|.|++++|||||+|+||+|+|++.......               +..+....  ..|++|+.+||
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~---------------~~~~~~~~--~~pl~R~~~pe  221 (259)
T d1xq1a_         159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD---------------EFKKVVIS--RKPLGRFGEPE  221 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGG
T ss_pred             cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH---------------HHHHHHHh--CCCCCCCcCHH
Confidence            99999999999999999999999999999999999998654332               11111111  35789999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++||+|++++|+||++|.||||+++.+
T Consensus       222 dvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~g  253 (259)
T d1xq1a_         222 EVSSLVAFLCMPAASYITGQTICVDGGLTVNG  253 (259)
T ss_dssp             GGHHHHHHHTSGGGTTCCSCEEECCCCEEETT
T ss_pred             HHHHHHHHHhCchhcCCcCcEEEeCCCEECCC
Confidence            99999999999999999999999999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=6.2e-58  Score=386.26  Aligned_cols=245  Identities=32%  Similarity=0.420  Sum_probs=210.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++..  ..+.+.+.+.++.+++||++|+++++++++++.+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999999999987532  3334445578899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.|+...|++|
T Consensus        80 ~iDilVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  155 (247)
T d2ew8a1          80 RCDILVNNAGIYPL----IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  155 (247)
T ss_dssp             CCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhh
Confidence            99999999998644    78999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+.+|+|+||.|++++|||||+|+||+|+|++.......                ...+.......+.+|+.+|||+|
T Consensus       156 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----------------~~~~~~~~~~~~l~r~~~pedvA  219 (247)
T d2ew8a1         156 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS----------------AMFDVLPNMLQAIPRLQVPLDLT  219 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------CTTSSSCSCCCTHHHH
T ss_pred             hccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc----------------hhHHHHHHHhccCCCCCCHHHHH
Confidence            99999999999999999999999999999999997654322                11111222335788999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+|+.++|+|||+|.||||++.
T Consensus       220 ~~v~fL~S~~s~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         220 GAAAFLASDDASFITGQTLAVDGGMVR  246 (247)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHHHhCchhcCCcCCeEEECCCEec
Confidence            999999999999999999999999874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.9e-58  Score=389.89  Aligned_cols=259  Identities=27%  Similarity=0.422  Sum_probs=228.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.+++||++++++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+....   .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.|+...|+++
T Consensus        82 ~iDilVnnaG~~~~~---~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  158 (260)
T d1zema1          82 KIDFLFNNAGYQGAF---APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  158 (260)
T ss_dssp             CCCEEEECCCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCeehhhhcccccc---CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHH
Confidence            999999999986432   67899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+.+|+|+||.|++++|||||+|+||+|+|++.....................++..+.+..  ..|++|+.+|||+|
T Consensus       159 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Pl~R~g~pedvA  236 (260)
T d1zema1         159 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG--SVPMRRYGDINEIP  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH--TSTTSSCBCGGGSH
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh--cCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999998765433211111111111222233333333  35889999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCC
Q 040531          252 EAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      ++++||+|+.++|+|||+|.||||
T Consensus       237 ~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         237 GVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHhCchhcCccCCeEEeCCC
Confidence            999999999999999999999998

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1e-57  Score=383.54  Aligned_cols=238  Identities=39%  Similarity=0.602  Sum_probs=221.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   ..++.++++|++|+++++++++++.++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999999999998888877   45688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||....    .++.+.+.++|++.+++|+.++++++|+++|.|+++++|+||++||..+..+.++...|+++
T Consensus        80 ~idilinnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  155 (244)
T d1nffa_          80 GLHVLVNNAGILNI----GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT  155 (244)
T ss_dssp             CCCEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCeEEEECCcccCC----CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhH
Confidence            99999999998654    68889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+|++|.||+++|||||+|+||+|+|++.......                       ....|++|+.+|||+|
T Consensus       156 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------------------~~~~pl~R~~~p~diA  212 (244)
T d1nffa_         156 KFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----------------------IFQTALGRAAEPVEVS  212 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----------------------CSCCSSSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----------------------HHhccccCCCCHHHHH
Confidence            99999999999999999999999999999999997543211                       0125789999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++++||+|++++|+|||+|.||||++.+
T Consensus       213 ~~v~fL~s~~s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         213 NLVVYLASDESSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHhChhhCCCcCCEEEECCCeecc
Confidence            9999999999999999999999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-57  Score=383.40  Aligned_cols=246  Identities=30%  Similarity=0.443  Sum_probs=216.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -|+||++|||||++|||+++|++|+++|++|++++|+++.. +..+++     ...+++||++|.++++++++++.+++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            37999999999999999999999999999999999998764 344444     245789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      +||+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+..+.++...|+++
T Consensus        76 ~iDiLVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  151 (248)
T d2d1ya1          76 RVDVLVNNAAIAAP----GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNAS  151 (248)
T ss_dssp             CCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHH
T ss_pred             CCCeEEEeCcCCCC----CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHH
Confidence            99999999998754    68889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+.+|+|++|+|++++|||||+|+||+|+||+.......           ....+...+.... ..|++|+.+|||+|
T Consensus       152 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~-----------~~~~~~~~~~~~~-~~pl~R~~~pedia  219 (248)
T d2d1ya1         152 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIAL-----------SPDPERTRRDWED-LHALRRLGKPEEVA  219 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-------------------CHHHHT-TSTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhc-----------CCCHHHHHHHHHh-cCCCCCCcCHHHHH
Confidence            99999999999999999999999999999999998765432           1111222222222 35789999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++++||+|+.++|+|||+|.||||++.+
T Consensus       220 ~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         220 EAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            9999999999999999999999999864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=7.3e-58  Score=388.39  Aligned_cols=253  Identities=26%  Similarity=0.377  Sum_probs=225.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+++|+||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh--hcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV--MVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +||||||+...    .++.+.+.++|++.+++|+.++++++|+++|.  |.+++.|+||+++|..+..+.|+...|++||
T Consensus        82 ilVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asK  157 (257)
T d2rhca1          82 VLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK  157 (257)
T ss_dssp             EEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             EEEecccccCC----CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHH
Confidence            99999998654    68899999999999999999999999999997  4556779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+.+|+|+||.|++++|||||+|+||+|+|+|...........     .....++..+....  ..|.+|+.+|||+|+
T Consensus       158 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-----~~~~~~e~~~~~~~--~~PlgR~~~pedia~  230 (257)
T d2rhca1         158 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDI-----WEVSTEEAFDRITA--RVPIGRYVQPSEVAE  230 (257)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHH-----TTCCHHHHHHHHHT--TSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhh-----cccChHHHHHHHHh--cCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999987654321100     00112333344433  368899999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +++||+|+.++|+|||+|.||||.+.
T Consensus       231 ~v~fL~S~~s~~itG~~i~vDGG~~~  256 (257)
T d2rhca1         231 MVAYLIGPGAAAVTAQALNVCGGLGN  256 (257)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHhCchhcCCcCceEEECcCccc
Confidence            99999999999999999999999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.9e-57  Score=384.14  Aligned_cols=243  Identities=36%  Similarity=0.494  Sum_probs=221.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ||+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++++|++++++++++++++.+++|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            699999999999999999999999999999999999999988877766   56789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|++|
T Consensus        79 ~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  154 (254)
T d1hdca_          79 SVDGLVNNAGISTG----MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGAS  154 (254)
T ss_dssp             CCCEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CccEEEecCccccc----cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHH
Confidence            99999999998654    68899999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC-CHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL-KARDI  250 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~eev  250 (285)
                      |+|+.+|+|+||.|++++|||||+|+||+|+|++..........                ...  -..|++|+. +|||+
T Consensus       155 Kaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~----------------~~~--~~~pl~R~g~~Pedv  216 (254)
T d1hdca_         155 KWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE----------------GNY--PNTPMGRVGNEPGEI  216 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST----------------TSC--TTSTTSSCB-CHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH----------------HHH--hCCCCCCCCCCHHHH
Confidence            99999999999999999999999999999999998765433110                000  135778886 69999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |++++||+|++++|+|||+|.|||||+..
T Consensus       217 A~~v~fL~S~~a~~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         217 AGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             HHHHHHHhchhhCCCCCceEEeCCCccCC
Confidence            99999999999999999999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.1e-57  Score=384.07  Aligned_cols=255  Identities=33%  Similarity=0.445  Sum_probs=223.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.+++||++++++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999999999888887   6789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      |+||+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|.+ ++.|+||++||..+..+.++.+.|+
T Consensus        78 g~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  153 (256)
T d1k2wa_          78 GSIDILVNNAALFDL----APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYC  153 (256)
T ss_dssp             SCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCccEEEeecccccc----cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchh
Confidence            999999999998654    68899999999999999999999999999997654 4579999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++|+|++|.||+++|||||+|+||+++|++............  ...   ..+..+....  ..|++|+.+|||
T Consensus       154 asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~--~~~---~~~~~~~~~~--~~PlgR~~~p~e  226 (256)
T d1k2wa_         154 ATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYE--NLP---RGEKKRQVGA--AVPFGRMGRAED  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHH--TCC---TTHHHHHHHH--HSTTSSCBCHHH
T ss_pred             hhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhc--cCC---hHHHHHHHHh--cCCCCCCcCHHH
Confidence            999999999999999999999999999999999999875533211000  000   0112222222  368899999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+|++++|+|||+|.||||.+++
T Consensus       227 vA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         227 LTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            999999999999999999999999998764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.5e-57  Score=378.74  Aligned_cols=241  Identities=34%  Similarity=0.492  Sum_probs=216.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++     +..+++||++|+++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999999988887755     46789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      |++|+||||||+...    .++.+.+.++|++.+++|+.+++++.|+++|.|.+++.+.++++||. +..+.++..+|++
T Consensus        76 g~iDilVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~a  150 (242)
T d1ulsa_          76 GRLDGVVHYAGITRD----NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAA  150 (242)
T ss_dssp             SSCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHH
T ss_pred             CCceEEEECCccccc----CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHH
Confidence            999999999998654    78899999999999999999999999999999998888888887774 5678889999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+.+|+|+||.|++++|||||+|+||+|+|++.....+                +..+....  ..|.+|+.+|||+
T Consensus       151 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~----------------~~~~~~~~--~~pl~R~~~pedi  212 (242)
T d1ulsa_         151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE----------------KVREKAIA--ATPLGRAGKPLEV  212 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH----------------HHHHHHHH--TCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH----------------HHHHHHHh--cCCCCCCCCHHHH
Confidence            99999999999999999999999999999999999754311                11122222  3688999999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |++++||+|++++|+||++|.||||+++.
T Consensus       213 a~~v~fL~S~~s~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         213 AYAALFLLSDESSFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHHHHhchhhCCCCCcEEEECCCccCC
Confidence            99999999999999999999999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=6.8e-57  Score=380.76  Aligned_cols=245  Identities=32%  Similarity=0.479  Sum_probs=221.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. +.++.++++|++|+++++++++++.+++|
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999999999999988888853 56899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCC-ceEEEEcccccccCCCCCccchh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRS-GCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +||+||||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++++. ++||+++|..+..+.|+...|++
T Consensus        82 ~iDiLVnnAg~~~~----~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~a  157 (251)
T d1zk4a1          82 PVSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNA  157 (251)
T ss_dssp             SCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CceEEEeccccccc----cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHH
Confidence            99999999998754    68999999999999999999999999999999998775 48999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHH--hCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          171 SKHAIVGLTKNTACE--LGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       171 sKaa~~~l~~~la~e--~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +|+|+.+|+|++|.|  ++++|||||+|+||+|+|++.......               +.....  ....|.+|+.+||
T Consensus       158 sKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~---------------~~~~~~--~~~~pl~R~~~pe  220 (251)
T d1zk4a1         158 SKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA---------------EEAMSQ--RTKTPMGHIGEPN  220 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH---------------HHHHTS--TTTCTTSSCBCHH
T ss_pred             HHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH---------------HHHHHH--HhCCCCCCCcCHH
Confidence            999999999999998  678999999999999999998754321               111111  1236889999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+|++++|+|||+|.||||++.
T Consensus       221 dvA~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         221 DIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEECccccc
Confidence            999999999999999999999999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.2e-56  Score=383.17  Aligned_cols=254  Identities=49%  Similarity=0.842  Sum_probs=225.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. ..++.+++||++|+++++++++++.+++|
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999999999999999988854 45688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC-ccchh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP-HAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~-~~Y~a  170 (285)
                      ++|++|||||+....  ...+.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+..+.++. ..|++
T Consensus        82 ~iD~lVnnAG~~~~~--~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~a  159 (268)
T d2bgka1          82 KLDIMFGNVGVLSTT--PYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA  159 (268)
T ss_dssp             CCCEEEECCCCCCSS--CSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred             CcceeccccccccCC--CcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccch
Confidence            999999999986542  135778899999999999999999999999999999999999999999998877665 48999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++|+|++|.||+++|||||+|+||+|+|++..+.+..             ..+..++.......+.+|+.+|||+
T Consensus       160 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------------~~~~~~~~~~~~~~~~gr~~~pedv  226 (268)
T d2bgka1         160 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-------------DSSRVEELAHQAANLKGTLLRAEDV  226 (268)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-------------CHHHHHHHHHHTCSSCSCCCCHHHH
T ss_pred             hHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC-------------CHHHHHHHHHhccccCCCCcCHHHH
Confidence            999999999999999999999999999999999998765432             1223333334445678899999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      |++++||+|++++|+|||+|.||||++.+.+
T Consensus       227 A~~v~fL~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         227 ADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             HHHHHHHhChhhCCccCceEEECcCcccCCC
Confidence            9999999999999999999999999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-57  Score=379.27  Aligned_cols=247  Identities=33%  Similarity=0.530  Sum_probs=219.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++    .++.+++||++|.++++++++++.+++|
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999999999999888777665    4578999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      +||+||||||+...   ..++.+.+.++|++.+++|+.+++.++|+++|.|+++ +|+||++||..+..+.++...|+++
T Consensus        79 ~iDilVnnAG~~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~as  154 (250)
T d1ydea1          79 RLDCVVNNAGHHPP---PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT  154 (250)
T ss_dssp             CCCEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCEEEeccccccc---ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHH
Confidence            99999999997533   2567889999999999999999999999999999754 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+.+|+|+||+|++++|||||+|+||+|+|++.+......          .+..+.+.+...  ..|++|+.+|||+|
T Consensus       155 Kaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~----------~~~~~~~~~~~~--~~pl~R~g~p~eva  222 (250)
T d1ydea1         155 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM----------PDPRASIREGML--AQPLGRMGQPAEVG  222 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS----------SSHHHHHHHHHH--TSTTSSCBCHHHHH
T ss_pred             HhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcC----------CCHHHHHHHHHh--cCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999987654321          112233333333  35889999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ++++||+|+ ++|+|||+|.||||+++.
T Consensus       223 ~~v~fL~Sd-a~~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         223 AAAVFLASE-ANFCTGIELLVTGGAELG  249 (250)
T ss_dssp             HHHHHHHHH-CTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHhCc-cCCCcCCeEEECCCcccC
Confidence            999999997 789999999999999863

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=3.5e-56  Score=377.68  Aligned_cols=255  Identities=27%  Similarity=0.392  Sum_probs=225.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.+++||+++.++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            47999999999999999999999999999999999999999999999998888899999999999999999999999998


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           91 -GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                       +.+|+||||||....    .++.+++.++|++++++|+.+++.+.++++|.|.++..|+||+++|..+..+.|....|+
T Consensus        82 ~g~idilinnag~~~~----~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~  157 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIH----KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS  157 (258)
T ss_dssp             TSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCcEEEecccccccc----CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHH
Confidence             689999999998654    688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+++|+|.||+|++++|||||+|+||+|+|++....+...          ....+..+....  ..|++|+.+|||
T Consensus       158 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~----------~~~~~~~~~~~~--~~plgR~~~ped  225 (258)
T d1ae1a_         158 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN----------PHQKEEIDNFIV--KTPMGRAGKPQE  225 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------CHHHHHHHHH--HSTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh----------hhhHHHHHHHHh--cCCCCCCcCHHH
Confidence            99999999999999999999999999999999999987654321          111233333333  368899999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|++++||+|++++|+||++|.||||++..++
T Consensus       226 iA~~v~fL~S~~s~~itG~~i~vDGG~s~~g~  257 (258)
T d1ae1a_         226 VSALIAFLCFPAASYITGQIIWADGGFTANGG  257 (258)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCSC
T ss_pred             HHHHHHHHhChhhCCCcCcEEEeCCCeeccCC
Confidence            99999999999999999999999999998765

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2e-56  Score=378.94  Aligned_cols=252  Identities=31%  Similarity=0.434  Sum_probs=222.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.+++||++|.++++++++++.+++|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            78999999999999999999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccCCCCCccchhhHHH
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      ||||||+...    .++.+.+.++|++.+++|+.++++++|+++|.|.++ +.++|+++||..+..+.|+.+.|+++|+|
T Consensus        82 lVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (255)
T d1gega_          82 IVNNAGVAPS----TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFA  157 (255)
T ss_dssp             EEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             EEeccccccc----CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHH
Confidence            9999998644    688999999999999999999999999999987655 46889999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +.+|+|+||.|++++|||||+|+||+|+|++.............  .   ...+...+...  ..|++|+.+|||+|+++
T Consensus       158 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~--~---~~~~~~~~~~~--~~pl~R~~~peevA~~v  230 (255)
T d1gega_         158 VRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAG--K---PLGYGTAEFAK--RITLGRLSEPEDVAACV  230 (255)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHT--C---CTTHHHHHHHT--TCTTCSCBCHHHHHHHH
T ss_pred             HHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhc--c---cchhHHHHHHh--cCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999998765432110000  0   00112222222  36889999999999999


Q ss_pred             HHHhcCCCCcccccEEEecCCccc
Q 040531          255 LYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +||+|++++|+||++|.||||+.+
T Consensus       231 ~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         231 SYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHhCchhCCccCcEEEecCCEEe
Confidence            999999999999999999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.5e-56  Score=376.97  Aligned_cols=241  Identities=28%  Similarity=0.465  Sum_probs=218.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIAD-IDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +++|||||++|||+++|++|+++|++|++.+ |+.+.++++.+++.+.+.++.++++|++|.++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999875 566677888888877788999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHH
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHA  174 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa  174 (285)
                      +||||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|++||+|
T Consensus        82 iLVnnAg~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa  157 (244)
T d1edoa_          82 VVVNNAGITRD----TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAG  157 (244)
T ss_dssp             EEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             ccccccccccc----cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHH
Confidence            99999998654    68999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHH
Q 040531          175 IVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAA  254 (285)
Q Consensus       175 ~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~  254 (285)
                      +.+|+|+||.||+++|||||+|+||+|+|++.....+                +..+....  ..|.+|+.+|||+|+++
T Consensus       158 l~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~----------------~~~~~~~~--~~pl~R~~~p~dvA~~v  219 (244)
T d1edoa_         158 VIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE----------------DMEKKILG--TIPLGRTGQPENVAGLV  219 (244)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH----------------HHHHHHHT--SCTTCSCBCHHHHHHHH
T ss_pred             HHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH----------------HHHHHHHh--cCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999765421                12222222  36889999999999999


Q ss_pred             HHHh-cCCCCcccccEEEecCCccc
Q 040531          255 LYLA-SDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       255 ~~l~-s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +||+ |+.++|+|||+|.+|||+++
T Consensus       220 ~fLa~S~~a~~itG~~i~vdGG~si  244 (244)
T d1edoa_         220 EFLALSPAASYITGQAFTIDGGIAI  244 (244)
T ss_dssp             HHHHHCSGGGGCCSCEEEESTTTTC
T ss_pred             HHHHCCchhcCCcCCeEEeCCCeeC
Confidence            9997 99999999999999999874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.4e-56  Score=380.26  Aligned_cols=260  Identities=27%  Similarity=0.358  Sum_probs=222.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.+++||++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999887643   4689999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++|++|+||||||.....+......+.+.++|++.+++|+.+++.++|+++|.|++++.+.|+++||.++..+.++...|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            99999999999999765433345567788899999999999999999999999987654544444446678899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh--hhhcccCCCCC
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR--GLANLKGVTLK  246 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  246 (285)
                      +++|+|+.+|+|+||.||+++|||||+|+||+|+|+|.......           +...+...+...  ....|++|+.+
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~PlgR~g~  230 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMP-----------DQASQKFYNFMASHKECIPIGAAGK  230 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCC-----------HHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCc-----------hHHHHHHHHHHHHHhcCCCCCCCcC
Confidence            99999999999999999999999999999999999998765432           222222222221  22458899999


Q ss_pred             HHHHHHHHHHHhcCC-CCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASDE-SKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~~-~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |||+|++++||+|++ +.|+|||+|.||||+++..++
T Consensus       231 pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~g~  267 (272)
T d1xkqa_         231 PEHIANIILFLADRNLSFYILGQSIVADGGTSLVMGT  267 (272)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCBGG
T ss_pred             HHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHhcCC
Confidence            999999999999976 679999999999999997654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.1e-56  Score=373.30  Aligned_cols=235  Identities=24%  Similarity=0.355  Sum_probs=205.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.+           .++..+++|++|.++++++++++.+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999999999999999987653           457889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      |++|+||||||+...    .++.+.+.++|++.+++|+.+++.+.|+++|.|++++.|+||++||..+..+.++...|++
T Consensus        72 g~iDiLVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  147 (237)
T d1uzma1          72 GPVEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAA  147 (237)
T ss_dssp             SSCSEEEEECSCCC---------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHH
T ss_pred             CCceEEEeeeccccc----ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHH
Confidence            999999999998654    6889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      ||+|+++|+|+||.|++++|||||+|+||+|+|++.+...+                 ...+.... ..|.+|+.+|||+
T Consensus       148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~-----------------~~~~~~~~-~~pl~R~~~pedv  209 (237)
T d1uzma1         148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-----------------RIQQGALQ-FIPAKRVGTPAEV  209 (237)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH-----------------HHHHHHGG-GCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCH-----------------HHHHHHHh-cCCCCCCcCHHHH
Confidence            99999999999999999999999999999999999865311                 11122222 3688999999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |++++||+|++++|+|||+|.+|||.++
T Consensus       210 A~~v~fL~S~~s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         210 AGVVSFLASEDASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHhCchhcCCcCCeEEECCCCCC
Confidence            9999999999999999999999999864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.9e-56  Score=379.33  Aligned_cols=258  Identities=26%  Similarity=0.365  Sum_probs=227.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+   .++.++++|+++.++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999999999887653   4689999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++|++|++|||||.....  ..+..+.+.++|++.+++|+.+++.+.|+++|.|++++.+.|+++||.++..+.++...|
T Consensus        81 ~~G~iDilVnnAG~~~~~--~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y  158 (274)
T d1xhla_          81 KFGKIDILVNNAGANLAD--GTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY  158 (274)
T ss_dssp             HHSCCCEEEECCCCCCCC--SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHH
T ss_pred             HcCCceEEEeeccccccc--ccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCcee
Confidence            999999999999975432  135566789999999999999999999999999998889999999998888899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh--hhcccCCCCC
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG--LANLKGVTLK  246 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  246 (285)
                      +++|+|+.+|+|++|.|++++|||||+|+||+|+||+.......           +...+...+....  -..|.+|+.+
T Consensus       159 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----------~~~~~~~~~~~~~~~~~iPlgR~g~  227 (274)
T d1xhla_         159 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP-----------ETASDKLYSFIGSRKECIPVGHCGK  227 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCC-----------HHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred             hhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhccc-----------chhhHHHHHHHHHHHcCCCCCCCcC
Confidence            99999999999999999999999999999999999998765332           2222333333222  2358899999


Q ss_pred             HHHHHHHHHHHhcC-CCCcccccEEEecCCccccccc
Q 040531          247 ARDIAEAALYLASD-ESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       247 ~eeva~~~~~l~s~-~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      |||+|++++||+|+ .++|+|||+|.||||+++..+|
T Consensus       228 pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g~  264 (274)
T d1xhla_         228 PEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGM  264 (274)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGG
T ss_pred             HHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhcCC
Confidence            99999999999995 6999999999999999998765

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.3e-56  Score=379.55  Aligned_cols=257  Identities=33%  Similarity=0.422  Sum_probs=207.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+   .++.++++|+++.++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999887643   4589999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc-ccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV-ASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~-~~~~~~~~~~~  167 (285)
                      ++|++|+||||||+........++.+.+.++|++.|++|+.+++.++|+++|.|++++ |.+|+++|. ++..+.|+...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence            9999999999999875544446677889999999999999999999999999997664 556666654 45778899999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |+++|+|+++|+|+||.|++++|||||+|+||+|+|++.........       ......+.......  ..|.+|+.+|
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~Pl~R~g~p  231 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEE-------TSKKFYSTMATMKE--CVPAGVMGQP  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------------HHHHHHHHH--HCTTSSCBCH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHH-------HHHHHHHHHHHHHh--cCCCCCCcCH
Confidence            99999999999999999999999999999999999999875432200       00111122222222  3689999999


Q ss_pred             HHHHHHHHHHhcC-CCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASD-ESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~-~~~~~~G~~i~vdgG~~~  278 (285)
                      ||+|++++||+|+ .++|+|||+|.||||+++
T Consensus       232 edvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         232 QDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            9999999999995 489999999999999986

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.8e-56  Score=371.82  Aligned_cols=241  Identities=27%  Similarity=0.352  Sum_probs=214.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |||+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++    ..+..+.+|++|.+++++++    +++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----GGI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHc
Confidence            6899999999999999999999999999999999999999888777665    35788999999999887654    567


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      |++|+||||||+...    .++.+.+.++|++.+++|+.+++.+.|+++|.|.+ +.+|+||+++|..+..+.|+...|+
T Consensus        73 g~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~  148 (242)
T d1cyda_          73 GPVDLLVNNAALVIM----QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS  148 (242)
T ss_dssp             CCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             CCCeEEEECCccccc----hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcccccc
Confidence            999999999998654    68999999999999999999999999999998654 4579999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+.+|+|+||.|++++|||||+|+||+|+|++.+.....              ++..+....  ..|.+|+.+|||
T Consensus       149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~--------------~~~~~~~~~--~~pl~R~~~pee  212 (242)
T d1cyda_         149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--------------PEFARKLKE--RHPLRKFAEVED  212 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--------------HHHHHHHHH--HSTTSSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC--------------HHHHHHHHh--cCCCCCCcCHHH
Confidence            9999999999999999999999999999999999998765332              122222222  368999999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +|++++||+|+.++|+|||+|.|||||+.+
T Consensus       213 va~~v~fL~S~~s~~itG~~i~vDGG~~as  242 (242)
T d1cyda_         213 VVNSILFLLSDRSASTSGGGILVDAGYLAS  242 (242)
T ss_dssp             HHHHHHHHHSGGGTTCCSSEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhcCcCCceEEeCcchhcc
Confidence            999999999999999999999999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.1e-57  Score=382.59  Aligned_cols=250  Identities=20%  Similarity=0.222  Sum_probs=219.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++.....      .+.++|+++.++++++++++.++||+||+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~------~~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE------TYPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH------HCTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC------cEEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            89999999999999999999999999999999888776654332      234689999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhHHHHH
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSKHAIV  176 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~  176 (285)
                      |||||+...   ..++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.++...|+++|+|+.
T Consensus        76 VnNAg~~~~---~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~  152 (252)
T d1zmta1          76 VSNDIFAPE---FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC  152 (252)
T ss_dssp             EEECCCCCC---CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred             EECCcCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHH
Confidence            999997543   26889999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHH
Q 040531          177 GLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALY  256 (285)
Q Consensus       177 ~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~  256 (285)
                      +|+|+||.||+++|||||+|+||+|+|++....+....        ....++..+....  ..|++|+.+|||+|++++|
T Consensus       153 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~--------~~~~~e~~~~~~~--~~pl~R~g~pedvA~~v~f  222 (252)
T d1zmta1         153 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEP--------WKTNPEHVAHVKK--VTALQRLGTQKELGELVAF  222 (252)
T ss_dssp             HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHH--------HTTCHHHHHHHHH--HSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccc--------ccCCHHHHHHHHh--cCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999765443200        0111233333333  3688999999999999999


Q ss_pred             HhcCCCCcccccEEEecCCcccccccccC
Q 040531          257 LASDESKYISGHNLVVDGGFTTSKNCVGL  285 (285)
Q Consensus       257 l~s~~~~~~~G~~i~vdgG~~~~~~~~~~  285 (285)
                      |+|+.++|+|||+|.||||+++..+|+||
T Consensus       223 L~S~~s~~iTG~~i~vdGG~~~~~~~p~~  251 (252)
T d1zmta1         223 LASGSCDYLTGQVFWLAGGFPMIERWPGM  251 (252)
T ss_dssp             HHTTSCGGGTTCEEEESTTCCCCCCCTTC
T ss_pred             HhCchhcCCcCCeEEECCCceeCCCCCcC
Confidence            99999999999999999999999999997

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.7e-56  Score=375.34  Aligned_cols=246  Identities=34%  Similarity=0.473  Sum_probs=218.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.+..++++|+++.++++++++++.+++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999999999888887   56788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|+++ +|+||++||..+..+.++...|+++
T Consensus        80 ~iDilVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~as  154 (253)
T d1hxha_          80 TLNVLVNNAGILLP----GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSAS  154 (253)
T ss_dssp             SCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCeEEecccccCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccch
Confidence            99999999998654    678899999999999999999999999999999754 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC--CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          172 KHAIVGLTKNTACELGK--YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~--~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      |+|+.+|+|++|.|+++  +|||||+|+||+|+|++.+..++..           ..++.....  ....+.+|+.+|||
T Consensus       155 Kaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~-----------~~~~~~~~~--~~~~~~gr~~~ped  221 (253)
T d1hxha_         155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG-----------VSKEMVLHD--PKLNRAGRAYMPER  221 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT-----------CCHHHHBCB--TTTBTTCCEECHHH
T ss_pred             hHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch-----------hhHHHHHhC--ccccccCCCCCHHH
Confidence            99999999999999987  5699999999999999987654431           111111111  11346788999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|++++||+|++++|+|||+|.||||++.
T Consensus       222 vA~~v~fL~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         222 IAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             HHHHHHHHhChhhCCCcCcEEEECccHhh
Confidence            99999999999999999999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-55  Score=370.46  Aligned_cols=242  Identities=28%  Similarity=0.363  Sum_probs=214.4

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |.+.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++    ..+..+++|++|.+++++++    +
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----H
Confidence            456789999999999999999999999999999999999999988877765    35788999999999987765    5


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc-CCCCceEEEEcccccccCCCCCcc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~ii~vss~~~~~~~~~~~~  167 (285)
                      +++++|+||||||....    .++.+.+.++|++.+++|+.+++.+.++++|.|. +++.|+||+++|..+..+.|+...
T Consensus        73 ~~g~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~  148 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSV  148 (244)
T ss_dssp             TCCCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             HhCCceEEEeccccccc----cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhh
Confidence            67999999999998654    6889999999999999999999999999999654 456899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          168 YTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       168 Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      |++||+|+++|+|++|.||+++|||||+|+||+|+|++.+..+..              .+..+....  ..|.+|+.+|
T Consensus       149 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~--------------~~~~~~~~~--~~pl~R~~~p  212 (244)
T d1pr9a_         149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--------------PHKAKTMLN--RIPLGKFAEV  212 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS--------------HHHHHHHHT--TCTTCSCBCH
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC--------------hHHHHHHHh--cCCCCCCcCH
Confidence            999999999999999999999999999999999999998765432              122222233  3588999999


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ||+|++++||+|+.++|+|||+|.|||||+.
T Consensus       213 eevA~~v~fL~S~~a~~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         213 EHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCchhCCcCCcEEEECccHhh
Confidence            9999999999999999999999999999974

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.5e-55  Score=373.36  Aligned_cols=250  Identities=28%  Similarity=0.331  Sum_probs=219.9

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+.|+|+||++|||||++|||+++|++|+++|++|++++|+.+.+.+..+++.+ .+.++.+++||++++++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999999999888887754 4678999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEccccccc-----
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVASLM-----  160 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~~~~-----  160 (285)
                      .+++|++|+||||||+...    .++.+.+.++|++.+++|+.+++.+.|+++|.|.+ +..+.|++++|.....     
T Consensus        82 ~~~~g~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~  157 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVV----KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS  157 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE
T ss_pred             HHHhCCCcEeccccccccc----CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc
Confidence            9999999999999998644    68899999999999999999999999999999864 4567788877765543     


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          161 --GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       161 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                        +.++...|+++|+|+.+|+|++|.||+++|||||+|+||+|+|++.....+                +..+....  .
T Consensus       158 ~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~----------------~~~~~~~~--~  219 (260)
T d1h5qa_         158 LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK----------------KIRDHQAS--N  219 (260)
T ss_dssp             TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH----------------HHHHHHHH--T
T ss_pred             cccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH----------------HHHHHHHh--c
Confidence              235678899999999999999999999999999999999999999765321                12222222  3


Q ss_pred             cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          239 NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       239 ~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .|.+|+.+|||+|++++||+|++++|+|||+|.||||++++
T Consensus       220 ~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         220 IPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             CTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             CCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCeecC
Confidence            68899999999999999999999999999999999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-55  Score=377.30  Aligned_cols=252  Identities=24%  Similarity=0.358  Sum_probs=222.6

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-----CCCceEEEeccCCCHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-----SSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      -.|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+     .+.++.+++||++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            358999999999999999999999999999999999999999999888854     246799999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+.+|++|+||||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|.+++.+.||++|+. +..+.|+.
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~~  162 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFL----SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLA  162 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTTC
T ss_pred             HHHHhCCeEEEEeecccccc----CchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-cccccccc
Confidence            99999999999999998644    78899999999999999999999999999999999889999988664 55678889


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+.+|+|++|.|++++|||||+|+||+|+|++....+....            ++..+....  ..|.+|+.
T Consensus       163 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------------~~~~~~~~~--~~plgR~g  228 (297)
T d1yxma1         163 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG------------QSFFEGSFQ--KIPAKRIG  228 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG------------GGGGTTGGG--GSTTSSCB
T ss_pred             ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC------------HHHHHHHHh--cCCCCCCc
Confidence            9999999999999999999999999999999999999999765443211            111111112  35789999


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCcccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKN  281 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~  281 (285)
                      +|||+|++++||+|+.++|+|||+|.||||+++...
T Consensus       229 ~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~  264 (297)
T d1yxma1         229 VPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH  264 (297)
T ss_dssp             CTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBT
T ss_pred             CHHHHHHHHHHHhCchhcCcCCcEEEeCcChhhhcC
Confidence            999999999999999999999999999999998543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.9e-55  Score=370.43  Aligned_cols=254  Identities=19%  Similarity=0.203  Sum_probs=213.4

Q ss_pred             cccccCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ++..||+||++|||||+|  |||+++|++|+++|++|++++|+++..+. .+++.+...+..++++|++|.+++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccCcccccccccCCHHHHHHHHHH
Confidence            356689999999999986  99999999999999999999988655444 444444456778899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +.+++|++|+||||||.........++.+.+.++|+..+++|+.+++.+++++.|.|++  .|+||+++|..+..+.|+.
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTC
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCc
Confidence            99999999999999998654333356778899999999999999999999999999854  5999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|+++|+|+++|+|++|.||+++|||||+|+||+|+|++.......              ++..+....  ..|++|+.
T Consensus       158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~--------------~~~~~~~~~--~~pl~R~~  221 (256)
T d1ulua_         158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF--------------TKMYDRVAQ--TAPLRRNI  221 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C--------------HHHHHHHHH--HSTTSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh--------------HHHHHHHHh--cCCCCCCc
Confidence            99999999999999999999999999999999999999987643211              122222222  36889999


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|||+|++++||+|++++|+|||+|.|||||++.+
T Consensus       222 ~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         222 TQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             CHHHHHHHHHHHhCchhCCccCCeEEECcCEeCcC
Confidence            99999999999999999999999999999999753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.7e-54  Score=371.01  Aligned_cols=261  Identities=26%  Similarity=0.358  Sum_probs=219.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++..+++|+++.++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999999888877766   5679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           91 GRLDILFNNAGVLGNQSK-HKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +++|++|||||+...... .....+.+.++|++.|++|+.+++.++|+++|.|+++ +|+||+++|..+..+.++.+.|+
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~  156 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYT  156 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHH
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHH
Confidence            999999999998644211 1233445567799999999999999999999999765 48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+.+|+|+||.|++++ ||||+|+||+|+|++..........       .....+...+.... ..|.+|+.+|||
T Consensus       157 asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~PlgR~g~pee  227 (276)
T d1bdba_         157 AAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGS-------KAISTVPLADMLKS-VLPIGRMPEVEE  227 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC----------------CHHHHHTT-TCTTSSCCCGGG
T ss_pred             HHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhh-------hccCcHHHHHHHHh-cCCCCCCcCHHH
Confidence            99999999999999999985 9999999999999987644322000       00011112222222 368899999999


Q ss_pred             HHHHHHHHhcC-CCCcccccEEEecCCccccccccc
Q 040531          250 IAEAALYLASD-ESKYISGHNLVVDGGFTTSKNCVG  284 (285)
Q Consensus       250 va~~~~~l~s~-~~~~~~G~~i~vdgG~~~~~~~~~  284 (285)
                      +|++++||+|+ .++|+|||+|.||||+++.+.|.|
T Consensus       228 va~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~~~~  263 (276)
T d1bdba_         228 YTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSG  263 (276)
T ss_dssp             GSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCSSCS
T ss_pred             HHHHHHHHcCCcccCCeeCcEEEECcChhhcceeCC
Confidence            99999999985 699999999999999999877655

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.3e-53  Score=360.07  Aligned_cols=256  Identities=28%  Similarity=0.366  Sum_probs=218.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADI-DDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+|+||++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.+.++.+++||++|.++++++++.+.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999998765 455567778888888889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-CCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-GGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~~~~~~~Y  168 (285)
                      +|++|++|||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++  .+++++++|..+.. +.++...|
T Consensus        82 ~g~idilinnag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y  155 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVW----CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALY  155 (259)
T ss_dssp             HSCEEEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHH
T ss_pred             cCCCcEEEeccccccc----cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhH
Confidence            9999999999998644    68889999999999999999999999999999964  46777777765544 67899999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+|+||+|++++|||||+|+||+|+|++.+..............    ..+.+.+.... ..|.+|+.+|+
T Consensus       156 ~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~pl~R~g~p~  230 (259)
T d1ja9a_         156 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM----PQEKIDEGLAN-MNPLKRIGYPA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTC----CHHHHHHHHHH-TSTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccC----CHHHHHHHHHh-CCCCCCCcCHH
Confidence            99999999999999999999999999999999999999876543221111111    12233232222 36889999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      |+|++++||+|+.++|+||++|.+|||+.
T Consensus       231 eVa~~v~fL~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         231 DIGRAVSALCQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCchhcCCcCceEEeCCCCC
Confidence            99999999999999999999999999973

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.4e-53  Score=356.88  Aligned_cols=239  Identities=31%  Similarity=0.457  Sum_probs=207.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.+++||++++++++++++++.+++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999999887776655   67899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.+.|+++|.|.+  .+.++++||. +..+.|+...|+++
T Consensus        79 ~iDiLinnAg~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~-a~~~~~~~~~Y~~s  151 (241)
T d2a4ka1          79 RLHGVAHFAGVAHS----ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSV-AGLGAFGLAHYAAG  151 (241)
T ss_dssp             CCCEEEEGGGGTTT----TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCC-TTCCHHHHHHHHHC
T ss_pred             CccEeccccccccc----cchhhhhcccccccccccccccccccccccccccc--ccceeecccc-ccccccCccccchh
Confidence            99999999998644    78899999999999999999999999999999854  3455555554 45555788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      |+|+++|+|+||+|++++|||||+|+||+|+|++.....                ++..++...  ..|.+|+.+|+|+|
T Consensus       152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~----------------~~~~~~~~~--~~p~~r~~~p~dva  213 (241)
T d2a4ka1         152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP----------------PWAWEQEVG--ASPLGRAGRPEEVA  213 (241)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC----------------HHHHHHHHH--TSTTCSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh----------------HhHHHHHHh--CCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999875421                123334433  36889999999999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCccc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ++++||+|++++|+||++|.+||||++
T Consensus       214 ~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         214 QAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHhcchhCCCcCceEEeCCCccc
Confidence            999999999999999999999999986

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.7e-52  Score=356.90  Aligned_cols=259  Identities=24%  Similarity=0.360  Sum_probs=220.8

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-chhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID-DAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      ...+|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.+.++.++++|++++++++++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3456999999999999999999999999999999999887 456677778888888899999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccccc-CCCCCc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLM-GGLGPH  166 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~-~~~~~~  166 (285)
                      +.+|++|++|||+|....    .++.+.+.++|++.+++|+.+++.+.|+++|.|.+  .|++++++|..+.. +.+...
T Consensus        92 ~~~g~idilV~nag~~~~----~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~  165 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSF----GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHA  165 (272)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCH
T ss_pred             HHhCCCCccccccccchh----hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchh
Confidence            999999999999998654    67889999999999999999999999999999964  47888888876544 566778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCC
Q 040531          167 AYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLK  246 (285)
Q Consensus       167 ~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .|+++|+|+++|+|++|+||+++|||||+|+||+|+|++.+.........  .+.  ... +...+.......|++|+.+
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~--~~~--~~~-~~~~~~~~~~~~PlgR~~~  240 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPN--GEN--LSN-EEVDEYAAVQWSPLRRVGL  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTT--CTT--CCH-HHHHHHHHHHSCTTCSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhc--ccc--cch-HHHHHHHHHccCCCCCCcC
Confidence            89999999999999999999999999999999999999988765442111  011  111 2222222222468899999


Q ss_pred             HHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          247 ARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       247 ~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |||+|++++||+|+.++|+||++|.||||+++
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            99999999999999999999999999999864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.8e-53  Score=353.21  Aligned_cols=231  Identities=23%  Similarity=0.337  Sum_probs=203.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.         ...++.||+++.      ++.+.+++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------~~~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------GHRYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------CSEEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------CCcEEEcchHHH------HHHHHHHhCC
Confidence            7999999999999999999999999999999999987665432         235678999863      4556778899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+..+.+....|+++|
T Consensus        67 iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asK  142 (234)
T d1o5ia_          67 VDILVLNAGGPKA----GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSAR  142 (234)
T ss_dssp             CSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CcEEEecccccCC----cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHH
Confidence            9999999997644    688899999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      +|+.+|+|++|.|++++|||||+|+||+++|++.......               +..+....  ..|.+|+.+|||+|+
T Consensus       143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~---------------~~~~~~~~--~~pl~R~~~pediA~  205 (234)
T d1o5ia_         143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE---------------EKKKQVES--QIPMRRMAKPEEIAS  205 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH---------------HHHHHHHT--TSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH---------------HHHHHHHh--cCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999998765432               11122222  368899999999999


Q ss_pred             HHHHHhcCCCCcccccEEEecCCcccc
Q 040531          253 AALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +++||+|++++|+|||+|.||||++..
T Consensus       206 ~v~fL~S~~s~~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         206 VVAFLCSEKASYLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHhChhhcCCcCcEEEECcccccC
Confidence            999999999999999999999999863

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=6e-52  Score=347.96  Aligned_cols=229  Identities=23%  Similarity=0.294  Sum_probs=210.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCe-------EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAK-------VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~-------v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.+++.+.+.++.+++||++|.++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999997       99999999999999999988888999999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++|++|+||||||+...    .++.+.+.++|++.|++|+.|++.++|+++|.|++++.|+||++||..+..+.|+.+.|
T Consensus        82 ~~g~iDilvnnAg~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  157 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF----GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  157 (240)
T ss_dssp             HTSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HcCCcceeecccccccC----CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHH
Confidence            99999999999998654    78999999999999999999999999999999999889999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+|+|+|.......                           ...++.+||
T Consensus       158 ~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~---------------------------~~~~~~~Pe  210 (240)
T d2bd0a1         158 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE---------------------------MQALMMMPE  210 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST---------------------------TGGGSBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh---------------------------hHhcCCCHH
Confidence            99999999999999999999999999999999999997643211                           123456899


Q ss_pred             HHHHHHHHHhcCCCCcccccE-EEecCC
Q 040531          249 DIAEAALYLASDESKYISGHN-LVVDGG  275 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~-i~vdgG  275 (285)
                      |+|++++||+++.+++++|+. +..+||
T Consensus       211 dvA~~v~~l~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         211 DIAAPVVQAYLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             HHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             HHHHHHHHHHcCCccCccCCEEEEecCC
Confidence            999999999999999998885 447776

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-52  Score=352.62  Aligned_cols=242  Identities=29%  Similarity=0.413  Sum_probs=208.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.+++||+++.++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999888664  4578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC---CceEEEEcccccccCCCCCcc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR---SGCIISTASVASLMGGLGPHA  167 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~ii~vss~~~~~~~~~~~~  167 (285)
                      |++|+||||||...            .++|++.+++|+.+++.+.+.++|.|.+++   .|+||++||..+..+.|+.++
T Consensus        81 G~iDilVnnAg~~~------------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~  148 (254)
T d2gdza1          81 GRLDILVNNAGVNN------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPV  148 (254)
T ss_dssp             SCCCEEEECCCCCC------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHH
T ss_pred             CCcCeecccccccc------------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccc
Confidence            99999999999852            234889999999999999999999998754   488999999999999999999


Q ss_pred             chhhHHHHHHHHHH--HHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          168 YTVSKHAIVGLTKN--TACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       168 Y~asKaa~~~l~~~--la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      |++||+|+.+|+|+  |+.|++++|||||+|+||+|+|+|...........     ...+..+.+.   .  ..|.+|+.
T Consensus       149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-----~~~~~~~~~~---~--~~p~~r~~  218 (254)
T d2gdza1         149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMG-----QYIEYKDHIK---D--MIKYYGIL  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHG-----GGGGGHHHHH---H--HHHHHCCB
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccccccc-----ccHHHHHHHH---h--cCCCCCCc
Confidence            99999999999997  78899999999999999999999987654321000     0001111211   1  24678889


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +|||+|++++||+|++  ++||++|.||||+++
T Consensus       219 ~pedvA~~v~fL~s~~--~itG~~i~VdGG~~~  249 (254)
T d2gdza1         219 DPPLIANGLITLIEDD--ALNGAIMKITTSKGI  249 (254)
T ss_dssp             CHHHHHHHHHHHHHCT--TCSSCEEEEETTTEE
T ss_pred             CHHHHHHHHHHHHcCC--CCCCCEEEECCCCee
Confidence            9999999999999874  599999999999875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-51  Score=343.98  Aligned_cols=246  Identities=28%  Similarity=0.347  Sum_probs=214.0

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .|..|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+  .++.+++||++++++++++++++
T Consensus         4 ~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           4 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3556999999999999999999999999999999999999999999999997754  47889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEcccccccCC--
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLMGG--  162 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~~~--  162 (285)
                      .+++|+||+||||||....    .++.+.+.++|++.+++|+.+++++.++++|.|++++  .|+||+++|..+....  
T Consensus        84 ~~~~g~iD~lVnnAg~~~~----~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~  159 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARP----DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  159 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHhcCCCCEEEecccccCC----CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC
Confidence            9999999999999998654    6889999999999999999999999999999987654  6999999999887544  


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHh--CCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACEL--GKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~--~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      ++...|+++|+|+.+|+|+||.|+  +++||+||+|+||+++|++.......             ..+.   ...  ..+
T Consensus       160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~-------------~~~~---~~~--~~~  221 (257)
T d1xg5a_         160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-------------DPEK---AAA--TYE  221 (257)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-------------CHHH---HHH--HHC
T ss_pred             cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh-------------hHHH---HHh--cCC
Confidence            456679999999999999999998  78999999999999999998765332             1111   111  247


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCc
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGF  276 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~  276 (285)
                      .+++++|||+|++++||+|++++|+|||++..++|.
T Consensus       222 ~~r~~~pedvA~~v~fL~s~~a~~itG~i~i~~~g~  257 (257)
T d1xg5a_         222 QMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTGS  257 (257)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETTC
T ss_pred             CCCCcCHHHHHHHHHHHhCChhcCeECCEEEEeCCC
Confidence            788999999999999999999999999987776663

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-51  Score=347.36  Aligned_cols=242  Identities=34%  Similarity=0.539  Sum_probs=208.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+     ...+....+|+.+.+.++.    ..+.++
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~----~~~~~~   73 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQ----FANEVE   73 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHH----HHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccc----cccccc
Confidence            4999999999999999999999999999999999999877654433     3457788899988766554    455678


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc-cCCCCCccchh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL-MGGLGPHAYTV  170 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~-~~~~~~~~Y~a  170 (285)
                      .+|+||||||....    .++.+.+.++|++.+++|+.+++.+.|++.|.|.+++.|+||+++|..+. .+.+....|++
T Consensus        74 ~id~lVn~ag~~~~----~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~  149 (245)
T d2ag5a1          74 RLDVLFNVAGFVHH----GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYST  149 (245)
T ss_dssp             CCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHH
T ss_pred             cceeEEecccccCC----CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHH
Confidence            99999999998754    67889999999999999999999999999999999999999999998774 57788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+|+++|+|+||.||+++|||||+|+||+|+||+.+.......          ...+..+....  ..|.+|+.+|||+
T Consensus       150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~----------~~~~~~~~~~~--~~pl~R~~~pedv  217 (245)
T d2ag5a1         150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG----------NPEEARNDFLK--RQKTGRFATAEEI  217 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS----------SHHHHHHHHHH--TCTTSSCEEHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhh----------hhHHHHHHHHh--cCCCCCCcCHHHH
Confidence            99999999999999999999999999999999999886543311          11122222222  4688999999999


Q ss_pred             HHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          251 AEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       251 a~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+++.||+|++++|+||++|.|||||++
T Consensus       218 a~~v~fL~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         218 AMLCVYLASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHhChhhCCCcCceEEeCCCcCC
Confidence            9999999999999999999999999985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.8e-52  Score=360.90  Aligned_cols=238  Identities=24%  Similarity=0.365  Sum_probs=208.4

Q ss_pred             ccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC---------chhhHHHHHHhhcCCCceEEEeccCCCHHHH
Q 040531            9 AYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID---------DAAGIALADSLLSSSPLVTYLHCDVSLEQDI   79 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~---------~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i   79 (285)
                      ++|+|+||++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++..   +...+.+|+++.+++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~   77 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR---RGGKAVANYDSVEAG   77 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH---TTCEEEEECCCGGGH
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh---cccccccccchHHHH
Confidence            3678999999999999999999999999999999998764         4445556665533   345577899999999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc
Q 040531           80 QNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL  159 (285)
Q Consensus        80 ~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~  159 (285)
                      +++++++.+++|+||+||||||+...    .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+.
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~  153 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILRD----RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  153 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCC----CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc
Confidence            99999999999999999999998754    78999999999999999999999999999999999889999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          160 MGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       160 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      .+.++...|++||+|+.+|+++||.|++++|||||+|+||++.|++.....                 +   +       
T Consensus       154 ~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~-----------------~---~-------  206 (302)
T d1gz6a_         154 YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP-----------------E---D-------  206 (302)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC-----------------H---H-------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc-----------------H---h-------
Confidence            999999999999999999999999999999999999999999887643221                 1   1       


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          240 LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                       ..+..+|||+|++++||+|+.+ ++||++|.|||||...-+|
T Consensus       207 -~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~~~~~~  247 (302)
T d1gz6a_         207 -LVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIGKLRW  247 (302)
T ss_dssp             -HHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEEEEEEE
T ss_pred             -hHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCceeEEEE
Confidence             1123589999999999999765 7899999999999875544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=7.3e-50  Score=345.58  Aligned_cols=249  Identities=25%  Similarity=0.343  Sum_probs=215.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.+++||+++.++++.+++.+.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            479999999999999999999999999999999999999999998888754 3567899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhc-CCCCceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMV-PRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|++|||||....    .++.+.+.++|++.+.+|+.+.+.+.+...+.+. .+..+.+++++|..+..+.++...|
T Consensus       101 ~g~iDilvnnAg~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Y  176 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFI----SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  176 (294)
T ss_dssp             TCSCSEEEECCCCCCC----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             ccccchhhhhhhhccc----cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchH
Confidence            9999999999998654    6788899999999999999999999888766655 4557788899998888899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+|.+|+|++++|||||+|+||+|+|++.......             ..+..+....  ..|.+|+.+||
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-------------~~~~~~~~~~--~~pl~R~~~pe  241 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-------------TGTFEKEMIG--RIPCGRLGTVE  241 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-------------TSHHHHHHHT--TCTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC-------------cHHHHHHHhh--cCCCCCCCCHH
Confidence            99999999999999999999999999999999999997654322             1122223333  35889999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      |+|++++||+|++++|+||++|.||||+++
T Consensus       242 diA~~v~fL~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         242 ELANLAAFLCSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence            999999999999999999999999999874

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.7e-48  Score=326.61  Aligned_cols=244  Identities=20%  Similarity=0.209  Sum_probs=209.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHH---CCCeEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVK---HGAKVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~---~g~~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+.+.++++.+++.+.  +.++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            68999999999999999999999996   7999999999999999999988653  457899999999999999999988


Q ss_pred             HHH----cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC--CceEEEEccccccc
Q 040531           87 ISK----HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR--SGCIISTASVASLM  160 (285)
Q Consensus        87 ~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~ii~vss~~~~~  160 (285)
                      .+.    ++.+|++|||||..... ...++.+.+.++|++++++|+.+++.++|+++|.|++++  .|+||++||..+..
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDV-SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCC-SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhhhhccCceEEEEecccccccC-CCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            763    45799999999986532 236788999999999999999999999999999998765  58999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc
Q 040531          161 GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL  240 (285)
Q Consensus       161 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      +.++...|++||+|+++|+|+||.|  ++|||||+|+||+|.|+|.+.......           .++....+ .. ..+
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~-----------~~~~~~~~-~~-~~~  226 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSK-----------DPELRSKL-QK-LKS  226 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCS-----------CHHHHHHH-HH-HHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCC-----------CHHHHHHH-Hh-cCC
Confidence            9999999999999999999999999  579999999999999999876543210           11122221 11 235


Q ss_pred             cCCCCCHHHHHHHHHHHhcCCCCcccccEEEe
Q 040531          241 KGVTLKARDIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       241 ~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      .+++.+|+|+|+.++||+++ ++|+||++|.|
T Consensus       227 ~~r~~~p~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         227 DGALVDCGTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             CCCCCCHHHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            68889999999999999986 46999999986

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1e-47  Score=324.71  Aligned_cols=241  Identities=22%  Similarity=0.199  Sum_probs=200.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCC-CHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVS-LEQDIQNLINVTIS   88 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s-~~~~i~~~~~~i~~   88 (285)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+..++..+.... ...++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999998887776555443322 3457999999998 67789999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC---CCceEEEEcccccccCCCCC
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR---RSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~ii~vss~~~~~~~~~~  165 (285)
                      ++++||+||||||..            +.++|++++++|+.|++.+.++++|.|.++   ..|+||+++|..+..+.++.
T Consensus        81 ~~g~iDilvnnAG~~------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~  148 (254)
T d1sbya1          81 QLKTVDILINGAGIL------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             HHSCCCEEEECCCCC------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS
T ss_pred             HcCCCCEEEeCCCCC------------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC
Confidence            999999999999963            446799999999999999999999999775   35899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCC
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTL  245 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ..|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+.....           ....+.+.+.     ....+..
T Consensus       149 ~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~-----------~~~~~~~~~~-----~~~~~~~  212 (254)
T d1sbya1         149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW-----------LDVEPRVAEL-----LLSHPTQ  212 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG-----------GGSCTTHHHH-----HTTSCCE
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccc-----------hhHHHHHHhc-----cccCCCC
Confidence            99999999999999999999999999999999999999987643211           0011111111     1223456


Q ss_pred             CHHHHHHHHHHHhcCCCCcccccEEEecCCccccccc
Q 040531          246 KARDIAEAALYLASDESKYISGHNLVVDGGFTTSKNC  282 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~~~  282 (285)
                      +||++|+.++++.+.   +.||++|.+|||+...-.|
T Consensus       213 ~~e~va~~~~~~~~~---~~tG~vi~vdgG~l~~~~~  246 (254)
T d1sbya1         213 TSEQCGQNFVKAIEA---NKNGAIWKLDLGTLEAIEW  246 (254)
T ss_dssp             EHHHHHHHHHHHHHH---CCTTCEEEEETTEEEECCC
T ss_pred             CHHHHHHHHHHhhhC---CCCCCEEEECCCEeCccCC
Confidence            899999999888754   3599999999998665554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-47  Score=321.24  Aligned_cols=219  Identities=26%  Similarity=0.312  Sum_probs=199.8

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.++.||++|.++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46999999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      |++|++|||||....    .++.+.+.+.|++++++|+.|+++++++++|.|++++.|+||++||..+..+.|+.+.|++
T Consensus        83 g~idilinnag~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  158 (244)
T d1yb1a_          83 GDVSILVNNAGVVYT----SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  158 (244)
T ss_dssp             CCCSEEEECCCCCCC----CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             CCCceeEeecccccc----ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHH
Confidence            999999999998755    5677889999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC---CCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          171 SKHAIVGLTKNTACELGK---YGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~---~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      ||+|+.+|+++|+.|+++   +||+||+|+||+|+|++.+...                            .+..+..+|
T Consensus       159 sKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~----------------------------~~~~~~~~p  210 (244)
T d1yb1a_         159 SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS----------------------------TSLGPTLEP  210 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH----------------------------HHHCCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC----------------------------ccccCCCCH
Confidence            999999999999999865   5899999999999999875421                            123456789


Q ss_pred             HHHHHHHHHHhcCC
Q 040531          248 RDIAEAALYLASDE  261 (285)
Q Consensus       248 eeva~~~~~l~s~~  261 (285)
                      |++|+.+.......
T Consensus       211 e~va~~i~~~~~~~  224 (244)
T d1yb1a_         211 EEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999998866443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-46  Score=319.73  Aligned_cols=249  Identities=18%  Similarity=0.208  Sum_probs=211.7

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      -|+||++|||||++  |||+++|+.|+++|++|++++|+++. .+..+++.....+...+++|+++..++...++.+.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            37999999999999  89999999999999999999998664 4444555555667788899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           90 HGRLDILFNNAGVLGNQS-KHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      ++++|++|||++...... ..........+.|...+++|+.+.+.+.+++.+.+.  +++.|+++||..+..+.|....|
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~~~~~~~~~~~Y  158 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVM  158 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTTTHH
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchhhccCCCCcHHH
Confidence            999999999998864321 112334567788999999999999999999999984  45779999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+|++|.||+++|||||+|+||+|+|++.......              ....+....  ..|.+|+.+||
T Consensus       159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------------~~~~~~~~~--~~pl~R~~~pe  222 (258)
T d1qsga_         159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF--------------RKMLAHCEA--VTPIRRTVTIE  222 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH--------------HHHHHHHHH--HSTTSSCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh--------------hhHHHHHHh--CCCCCCCcCHH
Confidence            99999999999999999999999999999999999997654221              112222222  36889999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      |+|++++||+|++++|+||++|.|||||++.
T Consensus       223 eia~~v~fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         223 DVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHhCchhcCccCceEEECcCHHHh
Confidence            9999999999999999999999999999876

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-46  Score=313.74  Aligned_cols=239  Identities=28%  Similarity=0.411  Sum_probs=204.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+||||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.+.....+|+.+.+.++...+.+...+
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc
Confidence            3799999999999999999999999999999999999999999888877   5678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC--CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC------CCceEEEEcccccccCC
Q 040531           91 GRLDILFNNAGVLGNQ--SKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR------RSGCIISTASVASLMGG  162 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~ii~vss~~~~~~~  162 (285)
                      ..+|.+++|++.....  ....++.+.+.++|++.+++|+.+++++.|++.|.|..+      +.|+||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            9999999998875432  122466778899999999999999999999999997643      57899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc-c
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL-K  241 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  241 (285)
                      |+...|+++|+|+++|+|+||+|++++|||||+|+||+++|++.....+                +..+....  ..| .
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~----------------~~~~~~~~--~~pl~  219 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE----------------KVCNFLAS--QVPFP  219 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------------CHHHH--TCSSS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH----------------HHHHHHHh--cCCCC
Confidence            9999999999999999999999999999999999999999998764321                11112222  234 4


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCCcccccEEEe
Q 040531          242 GVTLKARDIAEAALYLASDESKYISGHNLVV  272 (285)
Q Consensus       242 ~~~~~~eeva~~~~~l~s~~~~~~~G~~i~v  272 (285)
                      +|+.+|||+|++++||++  ++|+|||+|.|
T Consensus       220 ~R~g~peevA~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         220 SRLGDPAEYAHLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             CSCBCHHHHHHHHHHHHH--CTTCCSCEEEE
T ss_pred             CCCcCHHHHHHHHHHHHh--CCCCCceEeEC
Confidence            889999999999999996  57999999986

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.2e-45  Score=317.28  Aligned_cols=242  Identities=24%  Similarity=0.282  Sum_probs=193.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-hhhHHHHHHhhcC-CCceE-----------------EEeccCCCH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD-AAGIALADSLLSS-SPLVT-----------------YLHCDVSLE   76 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~-~~~~~~~~~~~~~-~~~v~-----------------~~~~D~s~~   76 (285)
                      .++|||||++|||+++|++|+++|++|++++++. +..+++.+++.+. +....                 .+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            4799999999999999999999999999987654 4555666666432 22333                 345669999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHH--------------HHHHHhhhhhHHHHHHHHHHhh
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEF--------------DNIIRINVRGAALGMKYAAKVM  142 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~l~~~~~~~~  142 (285)
                      ++++++++++.+++|++|+||||||....    .++.+.+.++|              ...|.+|+.+++++.|.+.+.+
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  158 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP----TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  158 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC----CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchh
Confidence            99999999999999999999999998755    45555555444              4579999999999999988753


Q ss_pred             ------cCCCCceEEEEcccccccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccc
Q 040531          143 ------VPRRSGCIISTASVASLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDC  216 (285)
Q Consensus       143 ------~~~~~g~ii~vss~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~  216 (285)
                            .+...+.|++++|.....+.++...|+++|+|+.+|+|++|+||+++|||||+|+||++.+....         
T Consensus       159 ~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~---------  229 (284)
T d1e7wa_         159 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM---------  229 (284)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS---------
T ss_pred             hhhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC---------
Confidence                  34457899999999998999999999999999999999999999999999999999986553311         


Q ss_pred             cCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          217 MDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                               .++..+..... ..+.+|+.+|||+|++++||+|++++|+|||+|.||||+++++
T Consensus       230 ---------~~~~~~~~~~~-~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         230 ---------PPAVWEGHRSK-VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             ---------CHHHHHHHHTT-CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             ---------CHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence                     11222233332 2235899999999999999999999999999999999999876

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-45  Score=323.35  Aligned_cols=261  Identities=20%  Similarity=0.205  Sum_probs=202.5

Q ss_pred             CCcEEEEec--CCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC------------CceEEE----------
Q 040531           14 EGKIAIVTG--GARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS------------PLVTYL----------   69 (285)
Q Consensus        14 ~~k~vlItG--as~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~------------~~v~~~----------   69 (285)
                      .+|++||||  +++|||+++|++|+++|++|++++++............+..            ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  55899999999999999999999988776554443322111            111222          


Q ss_pred             ----------eccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHH
Q 040531           70 ----------HCDVSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAA  139 (285)
Q Consensus        70 ----------~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (285)
                                .+|+++.++++.+++.+.+.+|+||+||||||....  ...++.+.+.++|++.+++|+++++.++|+++
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~--~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~  158 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE--VQKDLLNTSRKGYLDALSKSSYSLISLCKYFV  158 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccc--cCCChhhhhhhhhhhhcccchhHHHHHHHHHH
Confidence                      346778888999999999999999999999997543  22578899999999999999999999999999


Q ss_pred             HhhcCCCCceEEEEcccccccCCCCC-ccchhhHHHHHHHHHHHHHHhCC-CCcEEEEEeCCCccchhhhhhhcc-----
Q 040531          140 KVMVPRRSGCIISTASVASLMGGLGP-HAYTVSKHAIVGLTKNTACELGK-YGIRVNCISPFGVATSMLVNAWKS-----  212 (285)
Q Consensus       140 ~~~~~~~~g~ii~vss~~~~~~~~~~-~~Y~asKaa~~~l~~~la~e~~~-~~i~v~~v~pg~v~t~~~~~~~~~-----  212 (285)
                      |.|.  +.|+||++||.++..+.|++ ..|+++|+|+++|+|+||.||++ +|||||+|+||+|+|++.+.....     
T Consensus       159 ~~m~--~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~  236 (329)
T d1uh5a_         159 NIMK--PQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE  236 (329)
T ss_dssp             GGEE--EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-------
T ss_pred             hhcc--cccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhh
Confidence            9995  36899999999998888874 57899999999999999999986 699999999999999655432100     


Q ss_pred             -----------------------cccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccE
Q 040531          213 -----------------------CEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHN  269 (285)
Q Consensus       213 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~  269 (285)
                                             ...............+...+.... ..|++|..+|||+|++++||+|+.++|+|||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~  315 (329)
T d1uh5a_         237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEK-YAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHH-HSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             hhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhc-cCCCCCCcCHHHHHHHHHHHhCchhCCccCCe
Confidence                                   000000001111122233333332 46899999999999999999999999999999


Q ss_pred             EEecCCcccc
Q 040531          270 LVVDGGFTTS  279 (285)
Q Consensus       270 i~vdgG~~~~  279 (285)
                      |.||||+++.
T Consensus       316 i~VDGG~~~~  325 (329)
T d1uh5a_         316 IYVDNGLNIM  325 (329)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECCCcccc
Confidence            9999999764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=4.5e-45  Score=312.28  Aligned_cols=250  Identities=18%  Similarity=0.194  Sum_probs=204.8

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      -|+||++|||||+|  |||+++|++|+++|++|++++|+++ +.+..+++.+......++.+|+++.++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            37999999999875  9999999999999999999999854 45556666666777888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      ++.+|++|||+|..........+.+...+.+...+.++.++.+...+.+.+.+  +..+.|+++++.+...+.+....|+
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~  158 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMG  158 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhh
Confidence            99999999999987654334455556666777777777777777777666554  3345577777777777778888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|+|+.+++|+++.|++++|||||+|+||+++|++.......              ++.....  ....|.+|+.+|||
T Consensus       159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~--------------~~~~~~~--~~~~p~~r~~~ped  222 (274)
T d2pd4a1         159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF--------------RMILKWN--EINAPLRKNVSLEE  222 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH--------------HHHHHHH--HHHSTTSSCCCHHH
T ss_pred             HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch--------------HHHHHHH--hhhhhccCCcCHHH
Confidence            9999999999999999999999999999999999987654221              1111111  12468899999999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          250 IAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      +|++++||+|+.+.|+|||+|.|||||++.+
T Consensus       223 IA~~v~fL~S~~s~~itG~~i~vDGG~~~~g  253 (274)
T d2pd4a1         223 VGNAGMYLLSSLSSGVSGEVHFVDAGYHVMG  253 (274)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGBS
T ss_pred             HHHHHHHHhChhhCCCcCceEEECCChhhcc
Confidence            9999999999999999999999999999754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.3e-45  Score=316.54  Aligned_cols=251  Identities=22%  Similarity=0.158  Sum_probs=198.4

Q ss_pred             ccccCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-----------Cc-eEEEecc--
Q 040531            9 AYKTLEGKIAIVTGGAR--GIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-----------PL-VTYLHCD--   72 (285)
Q Consensus         9 ~~~~l~~k~vlItGas~--gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-----------~~-v~~~~~D--   72 (285)
                      ++++|+||++|||||+|  |||+++|++|+++|++|++++|+...............           .. -....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            67899999999999876  99999999999999999999987655433332221110           01 1222232  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHH
Q 040531           73 ------------------VSLEQDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALG  134 (285)
Q Consensus        73 ------------------~s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  134 (285)
                                        .++..+++++++++.++||+||+||||||....  ...++.+.+.++|++.+++|+.+++.+
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~~vn~~~~~~~  159 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE--VSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccc--cccchhhhhcccccccccchhhhhhhh
Confidence                              345567789999999999999999999997532  226788999999999999999999999


Q ss_pred             HHHHHHhhcCCCCceEEEEccccccc-CCCCCccchhhHHHHHHHHHHHHHHhC-CCCcEEEEEeCCCccchhhhhhhcc
Q 040531          135 MKYAAKVMVPRRSGCIISTASVASLM-GGLGPHAYTVSKHAIVGLTKNTACELG-KYGIRVNCISPFGVATSMLVNAWKS  212 (285)
Q Consensus       135 ~~~~~~~~~~~~~g~ii~vss~~~~~-~~~~~~~Y~asKaa~~~l~~~la~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~  212 (285)
                      ++++++.+.++  +.++.+++.+... ..+....|+++|+++.++++.++.|++ ++|||||+|+||+|.|++.+.... 
T Consensus       160 ~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~-  236 (297)
T d1d7oa_         160 LSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF-  236 (297)
T ss_dssp             HHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH-
T ss_pred             hhHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccC-
Confidence            99999988654  5566666655443 346677899999999999999999996 689999999999999998764321 


Q ss_pred             cccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          213 CEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                                   .++..+....  ..|++|+.+|||+|++++||+|+.++|+|||+|.||||++..
T Consensus       237 -------------~~~~~~~~~~--~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~  288 (297)
T d1d7oa_         237 -------------IDTMIEYSYN--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             -------------HHHHHHHHHH--HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             -------------CHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhc
Confidence                         1222222222  358999999999999999999999999999999999999864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=316.99  Aligned_cols=249  Identities=20%  Similarity=0.232  Sum_probs=192.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE---ecCchhh---HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIA---DIDDAAG---IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~---~r~~~~~---~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .|++|||||++|||+++|++|+++|++|+++   .|+.+..   .+..+++...+.++.+++||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5889999999999999999999999985544   5554443   344445555677899999999999999999987743


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                        +.+|+||||||....    .++.+.+.++|++.+++|+.|++.++++++|.|++++.|+||++||..+..+.|+...|
T Consensus        82 --g~idilvnnag~~~~----~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y  155 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL----GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVY  155 (285)
T ss_dssp             --SCCSEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHH
T ss_pred             --cchhhhhhccccccc----ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHH
Confidence              789999999998654    67888999999999999999999999999999999889999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ++||+|+.+|+++|+.|++++||+||+|+||+|+|++............+. ..........+........+.++..+||
T Consensus       156 ~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pe  234 (285)
T d1jtva_         156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDR-TDIHTFHRFYQYLAHSKQVFREAAQNPE  234 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhc-cchhHHHHHHHHHHHHhhhhcccCCCHH
Confidence            999999999999999999999999999999999999987654331111000 0001111111111111123445677999


Q ss_pred             HHHHHHHHHhcCC---CCcccccEE
Q 040531          249 DIAEAALYLASDE---SKYISGHNL  270 (285)
Q Consensus       249 eva~~~~~l~s~~---~~~~~G~~i  270 (285)
                      |+|+.+++++...   ..|++|+.+
T Consensus       235 eVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         235 EVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHHhCCCCCeEEecHHHH
Confidence            9999999999543   468888753

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.1e-44  Score=300.46  Aligned_cols=234  Identities=25%  Similarity=0.343  Sum_probs=197.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +|++|||||++|||+++|++|+++|++|++++|+++.            .+...+++|+++......+.....+.. ..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA-PLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc-ccc
Confidence            5999999999999999999999999999999998653            356788999999999999988877665 455


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh------hcCCCCceEEEEcccccccCCCCCccc
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV------MVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      .++++++..............+.+.|++.+++|+.+++.+.+.+.+.      |.+++.|+||++||..+..+.++...|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence            66666665443333355667788999999999999999999999988      555678999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      +++|+|+++|+|+||.|++++|||||+|+||+|+|++......                +...+.... ..+.+|+.+||
T Consensus       148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~----------------~~~~~~~~~-~~~~~R~g~pe  210 (241)
T d1uaya_         148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE----------------KAKASLAAQ-VPFPPRLGRPE  210 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH----------------HHHHHHHTT-CCSSCSCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh----------------hHHHHHHhc-CCCCCCCcCHH
Confidence            9999999999999999999999999999999999999875432                122222222 23458999999


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      |+|++++||+|  ++|+|||+|.||||+++.-
T Consensus       211 dvA~~v~fL~s--~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         211 EYAALVLHILE--NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             HHHHHHHHHHH--CTTCCSCEEEESTTCCCCC
T ss_pred             HHHHHHHHHHh--CCCCCCCEEEECCcccCCC
Confidence            99999999998  4799999999999998753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=4.3e-44  Score=305.12  Aligned_cols=257  Identities=21%  Similarity=0.186  Sum_probs=205.9

Q ss_pred             cCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGG--ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGa--s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|+++++.+...+  +.+.+...++||+++.++++++++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhc
Confidence            379999999995  57999999999999999999999998876433222  23567888999999999999999998776


Q ss_pred             c---CCccEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC
Q 040531           90 H---GRLDILFNNAGVLGNQ-SKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP  165 (285)
Q Consensus        90 ~---~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~  165 (285)
                      +   +.+|++|||+|+.... ....++.+.+.++|.+.+++|+.+.+...+...+.+.   .+.+++++|.....+.|..
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~  157 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAY  157 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTT
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCccc
Confidence            4   6799999999976432 1234677889999999999999999999998877653   3446666677777888999


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCC-C
Q 040531          166 HAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGV-T  244 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  244 (285)
                      ..|+++|+|+.+|+|++|+|++++|||||+|+||+|.|++..........     .......+.+.+.... ..|+++ +
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~pl~rr~  231 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALG-----EEAGAQIQLLEEGWDQ-RAPIGWNM  231 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTC-----HHHHHHHHHHHHHHHH-HCTTCCCT
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhh-----hhhccchHHHHHHHHh-cCCCCCCC
Confidence            99999999999999999999999999999999999999998766543110     0001111222222222 356554 8


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          245 LKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       245 ~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      .+|+|+|++++||+|+.++|+||++|.||||++.+
T Consensus       232 ~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         232 KDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             TCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            99999999999999999999999999999999865

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.5e-42  Score=294.96  Aligned_cols=245  Identities=26%  Similarity=0.317  Sum_probs=195.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-hHHHHHHhhcC-CCceEEEeccCCC----HHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-GIALADSLLSS-SPLVTYLHCDVSL----EQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~D~s~----~~~i~~~~~~i~~~   89 (285)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++.+. ..+...+++|+.+    .+.+.++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998665 45566666543 4566777665544    57788888889999


Q ss_pred             cCCccEEEECCCCCCCCCCC-------CCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-----CCCceEEEEcccc
Q 040531           90 HGRLDILFNNAGVLGNQSKH-------KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-----RRSGCIISTASVA  157 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~-------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~ii~vss~~  157 (285)
                      +|++|++|||||+..+....       ....+...+.+...+..|+.+++...+...+.+..     ...+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            99999999999986542110       11122335567788999999999999888887754     2457899999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          158 SLMGGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       158 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      +..+.|+...|++||+|+++|+|++|+|++++|||||+|+||+++|++...               +   +..++..+  
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---------------~---~~~~~~~~--  221 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---------------Q---ETQEEYRR--  221 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---------------H---HHHHHHHT--
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---------------H---HHHHHHHh--
Confidence            999999999999999999999999999999999999999999999986432               1   12222223  


Q ss_pred             hcccCC-CCCHHHHHHHHHHHhcCCCCcccccEEEecCCccccc
Q 040531          238 ANLKGV-TLKARDIAEAALYLASDESKYISGHNLVVDGGFTTSK  280 (285)
Q Consensus       238 ~~~~~~-~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~~  280 (285)
                      ..|+++ ..+|||+|++++||+|++++|+||++|.||||+++++
T Consensus       222 ~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         222 KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            245654 4799999999999999999999999999999999875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-44  Score=304.45  Aligned_cols=219  Identities=26%  Similarity=0.290  Sum_probs=191.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH-GAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.+++.+.+.++.+++||++|.++++++++++.+++++||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            46699999999999999999986 89999999999999999999988888999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-------------  161 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-------------  161 (285)
                      +||||||+...    .+..+.+.++|++.|++|++|++.++++++|.|++  .|+||+++|..+..+             
T Consensus        84 iLVnNAGi~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~  157 (275)
T d1wmaa1          84 VLVNNAGIAFK----VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFR  157 (275)
T ss_dssp             EEEECCCCCCC----TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             EEEEcCCcCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhc
Confidence            99999998754    45667788999999999999999999999999964  599999999765432             


Q ss_pred             ----------------------------CCCCccchhhHHHHHHHHHHHHHHhCC----CCcEEEEEeCCCccchhhhhh
Q 040531          162 ----------------------------GLGPHAYTVSKHAIVGLTKNTACELGK----YGIRVNCISPFGVATSMLVNA  209 (285)
Q Consensus       162 ----------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~----~~i~v~~v~pg~v~t~~~~~~  209 (285)
                                                  .++...|++||+|+.+|++.+++||++    .||+||+|+||+|.|+|.+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             ccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence                                        123356999999999999999999865    489999999999999986532


Q ss_pred             hcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHh--cCCCCcccccEEEecC
Q 040531          210 WKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAEAALYLA--SDESKYISGHNLVVDG  274 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~--s~~~~~~~G~~i~vdg  274 (285)
                      .                                 ..+|||.|+.++|++  +++..+++|+.+. |.
T Consensus       238 ~---------------------------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         238 A---------------------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             C---------------------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             c---------------------------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence            1                                 227999999999987  4566778999886 54

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=5.7e-43  Score=294.95  Aligned_cols=225  Identities=21%  Similarity=0.207  Sum_probs=186.5

Q ss_pred             cEEEEecCCCchhHHHHHHHH---HCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH--Hc
Q 040531           16 KIAIVTGGARGIGEATVRLFV---KHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS--KH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la---~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~--~~   90 (285)
                      |++|||||++|||+++|++|+   ++|++|++++|+.+.++++.+ +.+.+.++.+++||++|.++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            789999999999999999996   579999999999999887654 444567899999999999999999998854  67


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-----------CCceEEEEcccccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-----------RSGCIISTASVASL  159 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~ii~vss~~~~  159 (285)
                      +++|+||||||+....   .++.+.+.++|++.+++|+.+++.++++++|.|+++           ..|++|+++|..+.
T Consensus        82 ~~iDiLvnNAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          82 QGLNVLFNNAGIAPKS---ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             GCCSEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             CCcceEEeeccccccC---cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence            8999999999986542   567789999999999999999999999999999753           46899999998876


Q ss_pred             c---CCCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          160 M---GGLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       160 ~---~~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .   +.++..+|++||+|+.+|++++|.|++++||+||+|+||+|+|+|.....+                         
T Consensus       159 ~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~-------------------------  213 (248)
T d1snya_         159 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP-------------------------  213 (248)
T ss_dssp             STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS-------------------------
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC-------------------------
Confidence            4   345667899999999999999999999999999999999999999754321                         


Q ss_pred             hhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          237 LANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       237 ~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                              .++++.++.++.++.......+|+.|.+||+..
T Consensus       214 --------~~~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~i  246 (248)
T d1snya_         214 --------LDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  246 (248)
T ss_dssp             --------BCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             --------CCchHHHHHHHHHHHhcCccCCCcEEEECCeEc
Confidence                    123333343444443333446999999999764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.9e-43  Score=291.55  Aligned_cols=224  Identities=17%  Similarity=0.157  Sum_probs=191.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC--
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG--   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~--   91 (285)
                      +||++|||||++|||+++|++|+++|++|+++++++...          ......+.+|.++.++++.+.+++.+.++  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999876531          23456678899999999988888877654  


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ++|+||||||.....   .++.+.+.++|++.+++|+.+++.+.+.++|.|++  .|+||++||.++..+.++..+|++|
T Consensus        71 ~iD~lInnAG~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~as  145 (236)
T d1dhra_          71 KVDAILCVAGGWAGG---NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMA  145 (236)
T ss_dssp             CEEEEEECCCCCCCB---CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CceEEEECCcccccc---cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHH
Confidence            699999999975432   45667778999999999999999999999999954  5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          172 KHAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      |+|+++|+|+||.|++  ++||+||+|+||+|+||+.+...+.                          .+..++.+||+
T Consensus       146 Kaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~--------------------------~~~~~~~~pe~  199 (236)
T d1dhra_         146 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--------------------------ADFSSWTPLEF  199 (236)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--------------------------SCGGGSEEHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc--------------------------chhhcCCCHHH
Confidence            9999999999999998  6799999999999999997754332                          12344668999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEe---cCCccc
Q 040531          250 IAEAALYLASDESKYISGHNLVV---DGGFTT  278 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~v---dgG~~~  278 (285)
                      +|+.+.||+++...+++|+.|.|   ||+..+
T Consensus       200 va~~~~~l~s~~~~~i~G~~i~v~~~~g~t~~  231 (236)
T d1dhra_         200 LVETFHDWITGNKRPNSGSLIQVVTTDGKTEL  231 (236)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEEEETTEEEE
T ss_pred             HHHHHHHHhCCCccCCCCCeEEEEEECCEEEE
Confidence            99999999999999999997775   444443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-41  Score=286.57  Aligned_cols=223  Identities=19%  Similarity=0.204  Sum_probs=181.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |+.|+||||||++|||+++|++|+++|+  .|++++|+.++++++.+.   .+.++.+++||+++.++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            5679999999999999999999999996  588899999888766542   35679999999999999999999999887


Q ss_pred             C--CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-----------CCceEEEEcccc
Q 040531           91 G--RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-----------RSGCIISTASVA  157 (285)
Q Consensus        91 ~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~ii~vss~~  157 (285)
                      +  .+|+||||||+....   .++.+.+.++|++.|++|+.|++.++++++|.|+++           ..++++++++..
T Consensus        78 ~~~~idilinnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~  154 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSY---GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             GGGCCCEEEECCCCCCCB---CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             CCCCeEEEEEcCcccCCC---CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence            6  499999999986543   567788999999999999999999999999999753           247889888866


Q ss_pred             cccCC-------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH
Q 040531          158 SLMGG-------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM  230 (285)
Q Consensus       158 ~~~~~-------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      .....       .+..+|++||+|+.+|+++|+.||+++||+||+|+||+|+|+|....                     
T Consensus       155 ~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~---------------------  213 (250)
T d1yo6a1         155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN---------------------  213 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             ccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC---------------------
Confidence            54332       23456999999999999999999999999999999999999986421                     


Q ss_pred             HHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecC
Q 040531          231 EELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                                  ...+|||.++.++..+.+.....+|+.+.-||
T Consensus       214 ------------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         214 ------------AALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             -----------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             ------------CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence                        12478999999999887766678999988775

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-41  Score=285.19  Aligned_cols=193  Identities=20%  Similarity=0.197  Sum_probs=178.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+ .+..+..+.+|+++.+++..+++.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999999887754 456788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      .+|+++||||....    .++.+.+.++|++++++|+.+++.+++.++|.|+ +++|+||++||.++..+.|+...|++|
T Consensus        92 ~~~~li~nag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~~~~~~~p~~~~Y~as  166 (269)
T d1xu9a_          92 GLDMLILNHITNTS----LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSAS  166 (269)
T ss_dssp             SCSEEEECCCCCCC----CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             Cccccccccccccc----cccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccchhcCCCCCchHHHHH
Confidence            99999999998654    6778889999999999999999999999999996 457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC--CCcEEEEEeCCCccchhhhhhh
Q 040531          172 KHAIVGLTKNTACELGK--YGIRVNCISPFGVATSMLVNAW  210 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~--~~i~v~~v~pg~v~t~~~~~~~  210 (285)
                      |+|+++|+++|+.|+++  .||+||+|+||+|+|++.....
T Consensus       167 Kaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~  207 (269)
T d1xu9a_         167 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV  207 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc
Confidence            99999999999999974  5799999999999999987554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-40  Score=275.67  Aligned_cols=217  Identities=21%  Similarity=0.206  Sum_probs=183.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH--cCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK--HGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~--~~~   92 (285)
                      .++||||||++|||+++|++|+++|++|++++|+....          ......+.+|+.+.+......+.+.+.  +++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            45679999999999999999999999999999987542          223556778898888888777777664  588


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      ||+||||||.....   .+..+.+.+.|+.++++|+.+++.+.++++|.|++  +|+||++||..+..+.|+...|++||
T Consensus        72 iD~linnAG~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asK  146 (235)
T d1ooea_          72 VDGVFCVAGGWAGG---SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAK  146 (235)
T ss_dssp             EEEEEECCCCCCCB---CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             eeEEEECCcccccc---cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHH
Confidence            99999999986432   34555667889999999999999999999999954  59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC--CCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHH
Q 040531          173 HAIVGLTKNTACELG--KYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDI  250 (285)
Q Consensus       173 aa~~~l~~~la~e~~--~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eev  250 (285)
                      +|+++|+++||.|++  +.+|+||+|+||+++|++.+...+.                          .+..+..+|+++
T Consensus       147 aal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~--------------------------~~~~~~~~~~~v  200 (235)
T d1ooea_         147 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--------------------------ADHSSWTPLSFI  200 (235)
T ss_dssp             HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--------------------------CCGGGCBCHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC--------------------------CccccCCCHHHH
Confidence            999999999999998  5789999999999999998765432                          122346689999


Q ss_pred             HHHHH-HHhcCCCCcccccEEEe
Q 040531          251 AEAAL-YLASDESKYISGHNLVV  272 (285)
Q Consensus       251 a~~~~-~l~s~~~~~~~G~~i~v  272 (285)
                      ++.++ |+.++...+++|+.+.|
T Consensus       201 a~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         201 SEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHHHHhcCccccCCCceEEEE
Confidence            99987 55577788999999998

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.2e-40  Score=280.21  Aligned_cols=221  Identities=26%  Similarity=0.374  Sum_probs=167.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH-cCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK-HGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~-~~~id   94 (285)
                      |++|||||++|||+++|++|+++|++|++++|++++                 ..+|+++.+..+....++..+ .+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            789999999999999999999999999999997653                 357999999888876666554 45799


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc---------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL---------------  159 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~---------------  159 (285)
                      ++|||||+...           .+.+.....+|..+...+.+..++.+.+.....+.++.+....               
T Consensus        65 ~lv~~Ag~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (257)
T d1fjha_          65 GLVLCAGLGPQ-----------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             EEEECCCCCTT-----------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             EEEEcCCCCCc-----------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccC
Confidence            99999997421           2346778899999999999999998877666666666554322               


Q ss_pred             ------------cCC-CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHH
Q 040531          160 ------------MGG-LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEE  226 (285)
Q Consensus       160 ------------~~~-~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                  .+. ++..+|++||+|+++|+|++|.||+++|||||+|+||+|+|++.+..+.+              
T Consensus       134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------------  199 (257)
T d1fjha_         134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--------------  199 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------
T ss_pred             CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--------------
Confidence                        111 12346999999999999999999999999999999999999998765432              


Q ss_pred             HHHHHHHHhhhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          227 EEKMEELVRGLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                       +...+.......|.+|+.+|||+|++++||+|++++|+|||+|.||||++..
T Consensus       200 -~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~tav  251 (257)
T d1fjha_         200 -PRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             ----------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             -HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccch
Confidence             1111111222358899999999999999999999999999999999999854

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.98  E-value=9.3e-32  Score=227.32  Aligned_cols=224  Identities=17%  Similarity=0.212  Sum_probs=174.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---hhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDD---AAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++.+.+.++.++.||++|.++++++++.+.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            478999999999999999999999999 488898864   4456666777667888999999999999999999987654


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                       +++|.+|||+|....    .++.+.+.++|+..+++|+.+++++.+.+    .+.+.++||++||..+..+.++.+.|+
T Consensus        88 -~~i~~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~Ya  158 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDD----GTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYA  158 (259)
T ss_dssp             -SCEEEEEECCCCCCC----CCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTH
T ss_pred             -ccccccccccccccc----cccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHH
Confidence             589999999998755    68889999999999999999999887754    445678999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHH
Q 040531          170 VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARD  249 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee  249 (285)
                      ++|++++.|++.++.    .|+++++|+||++.++.....                   ...+...   ......++|++
T Consensus       159 Aaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~-------------------~~~~~~~---~~G~~~~~~~~  212 (259)
T d2fr1a1         159 PGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEG-------------------PVADRFR---RHGVIEMPPET  212 (259)
T ss_dssp             HHHHHHHHHHHHHHH----TTCCCEEEEECCBC-------------------------------CT---TTTEECBCHHH
T ss_pred             HHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccc-------------------hHHHHHH---hcCCCCCCHHH
Confidence            999999988777654    589999999999875432110                   0011111   11112468999


Q ss_pred             HHHHHHHHhcCCCCcccccEEEecC
Q 040531          250 IAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       250 va~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      .++.+..++....  .....+.+|.
T Consensus       213 ~~~~l~~~l~~~~--~~~~v~~~d~  235 (259)
T d2fr1a1         213 ACRALQNALDRAE--VCPIVIDVRW  235 (259)
T ss_dssp             HHHHHHHHHHTTC--SSCEECEECH
T ss_pred             HHHHHHHHHhCCC--ceEEEEeCcH
Confidence            9999988885543  2344455553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.9e-20  Score=162.32  Aligned_cols=232  Identities=12%  Similarity=0.085  Sum_probs=157.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-----hhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-----AGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|+||||||+|.||++++++|+++|++|++++|...     +.....+.......++.++++|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999999998543     222333333334568999999999999999988754   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--------  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--------  161 (285)
                        .+|+++|+|+.....        .+.++....+++|+.++..+++++...-. ++..++|++||...+..        
T Consensus        78 --~~d~v~h~aa~~~~~--------~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E  146 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA--------VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKE  146 (357)
T ss_dssp             --CCSEEEECCCCCTTT--------TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             --CCCEEEEeecccccc--------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCC
Confidence              689999999975431        23344567799999999999999866432 34567999998653211        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          162 ---GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       162 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                         ..+...|+.+|.+.+.+++.+++.+   ++.+..+.|+.+.+|........           ......+.....+..
T Consensus       147 ~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~-----------~~i~~~~~~~~~~~~  212 (357)
T d1db3a_         147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVT-----------RKITRAIANIAQGLE  212 (357)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHH-----------HHHHHHHHHHHTTSC
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCc-----------hHHHHHHHHHHhCCC
Confidence               1135679999999999999998874   68889999999988753221110           111122222222111


Q ss_pred             c--------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          239 N--------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       239 ~--------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .        ....++.++|+++++..++...    .|+.+++.+|-..
T Consensus       213 ~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         213 SCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             CCEEESCTTCEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             ceEEECCCCeeecceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            1        0112577999999998887543    4677777766554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=2.4e-22  Score=161.34  Aligned_cols=157  Identities=16%  Similarity=0.144  Sum_probs=116.4

Q ss_pred             ccccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531            7 KKAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      +....+|+||++|||||++|||++++++|+++|++|++++|+.++++++.+++.+. .++....+|+++.+++++++   
T Consensus        15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~---   90 (191)
T d1luaa1          15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV---   90 (191)
T ss_dssp             HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT---
T ss_pred             HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh---
Confidence            44567999999999999999999999999999999999999999999998888542 34566889999999887764   


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-CCCC
Q 040531           87 ISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-GLGP  165 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-~~~~  165 (285)
                          +.+|+||||||+.        +...+.+.|++.+++|+.+.++....+.+.+.... .....+++.....+ ..+.
T Consensus        91 ----~~iDilin~Ag~g--------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~  157 (191)
T d1luaa1          91 ----KGAHFVFTAGAIG--------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGG  157 (191)
T ss_dssp             ----TTCSEEEECCCTT--------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHH
T ss_pred             ----cCcCeeeecCccc--------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCc
Confidence                5799999999863        23468899999999999888766544433332221 12222222221111 0123


Q ss_pred             ccchhhHHHHHHHHH
Q 040531          166 HAYTVSKHAIVGLTK  180 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~  180 (285)
                      ..|+++|+|+..+++
T Consensus       158 ~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         158 LKLKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHh
Confidence            469999999988764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.1e-17  Score=145.29  Aligned_cols=170  Identities=16%  Similarity=0.132  Sum_probs=128.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH---HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI---ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+|||||+|.||+.++++|+++|+.|++++|-.....   ...+..  ...++.++++|++|.+.+.++++.     .++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~-----~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHD-----HAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHH-----TTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhc-----cCC
Confidence            5999999999999999999999999999986322211   122222  245789999999999999888764     269


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------  162 (285)
                      |+|||.|+....        ..+.++..+.+++|+.|+..+++++...    +..++|++||.....+.           
T Consensus        75 d~ViHlAa~~~~--------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~  142 (338)
T d1udca_          75 DTVIHFAGLKAV--------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPT  142 (338)
T ss_dssp             SEEEECCSCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCC
T ss_pred             CEEEECCCccch--------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEcccccccccccccc
Confidence            999999986421        1233445688999999999999988664    34579999887654321           


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          163 -LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       163 -~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                       .+...|+.+|.+.+.+++..+.+.  .++.+..++|+.+.++...
T Consensus       143 ~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~  186 (338)
T d1udca_         143 GTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPS  186 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTT
T ss_pred             CCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCC
Confidence             135679999999999999887764  4688888999988876443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.74  E-value=2.1e-17  Score=144.87  Aligned_cols=228  Identities=18%  Similarity=0.106  Sum_probs=157.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEE-EEecCchhhH-HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVV-IADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~-~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .||||||+|.||++++++|++.|+.++ ++++...... ...+.+ ....++.++.+|++|.+++.++++..     .+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            589999999999999999999999854 4554322211 111111 12457999999999999998887643     699


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-----CCceEEEEcccccccCC-------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-----RSGCIISTASVASLMGG-------  162 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~ii~vss~~~~~~~-------  162 (285)
                      +|||+|+....        ..+.++..+.+++|+.+...+++.+.......     +..++|++||.......       
T Consensus        76 ~VihlAa~~~~--------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (361)
T d1kewa_          76 AVMHLAAESHV--------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             EEEECCSCCCH--------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             EEEECccccch--------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccc
Confidence            99999986422        12234456789999999999999988765432     24589999997644211       


Q ss_pred             --------------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH
Q 040531          163 --------------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE  228 (285)
Q Consensus       163 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                                    .+...|+.+|.+.+.+++.++..+   ++.+.+++|+.|..|.....              .....
T Consensus       148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~--------------~~i~~  210 (361)
T d1kewa_         148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--------------KLIPL  210 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--------------SHHHH
T ss_pred             cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcC--------------cHHHH
Confidence                          123569999999999999998764   68999999999988753210              11122


Q ss_pred             HHHHHHhhhhcc-cC------CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          229 KMEELVRGLANL-KG------VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       229 ~~~~~~~~~~~~-~~------~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .+.....+-... .+      .++..+|+|+++..++....   .|+.+++.+|-..
T Consensus       211 ~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         211 VILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             HHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             HHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence            333333332111 11      14688999999999886542   4788988776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.73  E-value=5.1e-17  Score=141.28  Aligned_cols=227  Identities=17%  Similarity=0.095  Sum_probs=151.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc--CCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS--SSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +||+||||||+|.||.+++++|+++|+.|+.+.|+.+...........  .......+..|+++.+++..++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            589999999999999999999999999999999987765554432221  22335668899999888766543       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-CC-------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-GL-------  163 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-~~-------  163 (285)
                      .+|+++|+++....        ..+   ....+..|+.++..+++.+...   ....++|++||..+... .+       
T Consensus        83 ~~~~v~~~a~~~~~--------~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          83 GAAGVAHIASVVSF--------SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             TCSEEEECCCCCSC--------CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             cchhhhhhcccccc--------ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccc
Confidence            68999999886421        122   3455778999999988887552   24578999999754321 11       


Q ss_pred             -----------------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCC
Q 040531          164 -----------------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSG  220 (285)
Q Consensus       164 -----------------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~  220 (285)
                                             +...|+.+|.+.+.+++.+++... .++++.+++|+.+..|........        
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~--------  219 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQS--------  219 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCC--------
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccc--------
Confidence                                   123599999999999999988865 368888899988876542211000        


Q ss_pred             CCchHHHHHHHHHHhhh------hcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          221 KPCEEEEEKMEELVRGL------ANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       221 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                         ......+.....+.      ......++.++|+|++++..+...  ...|+.+...++
T Consensus       220 ---~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~--~~~g~~~~~~~~  275 (342)
T d1y1pa1         220 ---GSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG  275 (342)
T ss_dssp             ---CHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred             ---cchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc--cccceEEEEcCC
Confidence               11112222222211      011122467899999987766432  236666655544

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=2.3e-16  Score=139.56  Aligned_cols=175  Identities=14%  Similarity=-0.006  Sum_probs=128.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh----------------hHHHHHHhh-cCCCceEEEeccCCCHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA----------------GIALADSLL-SSSPLVTYLHCDVSLEQ   77 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~----------------~~~~~~~~~-~~~~~v~~~~~D~s~~~   77 (285)
                      ||.||||||+|.||.+++++|+++|++|+++|.-...                ......... ..+.++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999998721111                111111111 12457899999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      .++.+++..     ++|+|+|.|+....     +....+.+.....+++|+.|+..++.++...-   ...++++.||..
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~-----~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---~~~~~i~~ss~~  147 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA-----PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMG  147 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH-----HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGG
T ss_pred             HHHHHHHhh-----cchheecccccccc-----ccccccccccccccccccccccHHHHHHHHhc---cccceeeccccc
Confidence            999887754     69999999987432     22334667778889999999999999886543   234566666654


Q ss_pred             cccC------------------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          158 SLMG------------------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       158 ~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                      ....                        ..+...|+.+|.+.+.+++.+++++   ++.+.++.|+.+..+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            3211                        1123469999999999999888764   6899999998888764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=1.9e-16  Score=136.01  Aligned_cols=227  Identities=15%  Similarity=0.074  Sum_probs=150.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH-HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI-ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      |+||||||+|.||++++++|+++|++|+.++|...... ...+.+ ...+++.++.+|++|.+.+.+.+...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            78999999999999999999999999999998754322 222222 12356899999999999988877653     578


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------------  162 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------------  162 (285)
                      +++|+|+.....        ...+.....++.|+.++..++.++...-   ...++++.||.. ..+.            
T Consensus        75 ~~~~~a~~~~~~--------~~~~~~~~~~~~n~~g~~~~l~~~~~~~---~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~  142 (321)
T d1rpna_          75 EVYNLAAQSFVG--------ASWNQPVTTGVVDGLGVTHLLEAIRQFS---PETRFYQASTSE-MFGLIQAERQDENTPF  142 (321)
T ss_dssp             EEEECCSCCCHH--------HHTTSHHHHHHHHTHHHHHHHHHHHHHC---TTSEEEEEEEGG-GGCSCSSSSBCTTSCC
T ss_pred             cccccccccccc--------ccccchHHHHhhhhhchHHHHHHHHHhC---CCcccccccchh-hcCcccCCCCCCCCCc
Confidence            888887654221        1223356778999999999998876532   234566666643 3221            


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcc--
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANL--  240 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  240 (285)
                      .+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|........           ......+.....+-...  
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~-----------~~i~~~~~~~~~~~~~~i~  208 (321)
T d1rpna_         143 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVT-----------RKVTDAVARIKLGKQQELR  208 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHH-----------HHHHHHHHHHHTTSCSCEE
T ss_pred             cccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccH-----------HHHHHHHHHHHhCCCCcEE
Confidence            134689999999999999988774   58888899988887753211100           00111111111111111  


Q ss_pred             c------CCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          241 K------GVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       241 ~------~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      .      ..++..+|+++++..++....    +..+++.+|-..
T Consensus       209 ~g~g~~~r~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~~  248 (321)
T d1rpna_         209 LGNVDAKRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTT  248 (321)
T ss_dssp             ESCTTCEEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             ECCCCeEEccEEeHHHHHHHHHHHhcCC----cCCceecccccc
Confidence            1      125788999999999885542    344666665443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=5.8e-16  Score=134.42  Aligned_cols=173  Identities=10%  Similarity=-0.028  Sum_probs=125.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh-----HHHHHHhh-cCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-----IALADSLL-SSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~-----~~~~~~~~-~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |+||||||+|.||++++++|+++|+.|+.++|+....     +.+..... ....++.++.+|++|.+.+..+++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            4559999999999999999999999999999865321     11111111 11346899999999999999887653   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--------  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--------  161 (285)
                        .+++++|.++....        ....+.....+++|+.++..++.++...-. .+..++|++||.+.+..        
T Consensus        79 --~~~~v~~~~a~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E  147 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV--------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKE  147 (347)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             --ccceeeeeeecccc--------chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCC
Confidence              68888988875421        123444566789999999999998876543 23457999998653211        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          162 ---GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       162 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                         ..+...|+.||.+.+.+++.++..+   ++.+..++|+.+..|.
T Consensus       148 ~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         148 TTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPR  191 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence               1134579999999999999988764   6888889998888764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=4.3e-16  Score=134.70  Aligned_cols=175  Identities=17%  Similarity=0.058  Sum_probs=126.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch-----hhHHHHHHhh-cCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA-----AGIALADSLL-SSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~-----~~~~~~~~~~-~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |++|||||+|.||++++++|+++|++|+.++|...     .......... .....+.++.+|+++.+++.+.++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            79999999999999999999999999999998543     1111111111 11345889999999999998887643   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcccccccC-------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTASVASLMG-------  161 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss~~~~~~-------  161 (285)
                        .+|+|||+|+....        ....++....++.|+.+...++.++....... ...+++..||......       
T Consensus        79 --~~D~Vih~Aa~~~~--------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV--------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             --ccchhhhccccccc--------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence              79999999986432        11334566788999999999988886544332 2345555555433221       


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhh
Q 040531          162 ---GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSML  206 (285)
Q Consensus       162 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~  206 (285)
                         ..+...|+.+|.+.+.+++..++.   +++.+..++|+.|..|..
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRR  193 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTS
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCC
Confidence               123568999999999999998876   468999999999988753

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=3.6e-16  Score=136.05  Aligned_cols=169  Identities=18%  Similarity=0.177  Sum_probs=124.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh-hH--HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA-GI--ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~-~~--~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |+||||||+|.||++++++|+++|++|+++++-... ..  ...+.+  ...++.++++|++|.++++.+++..     +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            789999999999999999999999999998753221 11  111222  2456889999999999998876532     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------  161 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------  161 (285)
                      +|+|||+|+....        ....+.....+.+|+.+...++.++...    +..++|++||......           
T Consensus        75 ~d~VihlAa~~~~--------~~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~~~~~~~~~~  142 (347)
T d1z45a2          75 IDSVIHFAGLKAV--------GESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIPIP  142 (347)
T ss_dssp             CCEEEECCSCCCH--------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred             CCEEEEccccccc--------cccccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeeecCcccCCCCCccc
Confidence            9999999987532        1123344667889999999999998653    3347999999665421           


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccch
Q 040531          162 ----GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATS  204 (285)
Q Consensus       162 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~  204 (285)
                          ..+...|+.+|.+.+.+++.+.... ..++.+..++|+.+..+
T Consensus       143 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         143 EECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence                1134579999999999999887653 35688888887766654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=7.2e-16  Score=133.66  Aligned_cols=226  Identities=15%  Similarity=0.117  Sum_probs=152.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      .+|||||+|.||++++++|+++| +.|+.+++.........     ...++.++++|+++.+++.+.+.   +   .+|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~   70 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV---K---KCDV   70 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH---H---HCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH---h---CCCc
Confidence            58999999999999999999999 57999988665433222     24679999999998766544322   1   4999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------------  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------------  163 (285)
                      |||+|+.....        ...++....+++|+.+...+++++...     +.++++.||.......+            
T Consensus        71 Vih~a~~~~~~--------~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~  137 (342)
T d2blla1          71 VLPLVAIATPI--------EYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLI  137 (342)
T ss_dssp             EEECBCCCCHH--------HHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred             ccccccccccc--------ccccCCccccccccccccccccccccc-----ccccccccccccccccccccccccccccc
Confidence            99999975321        123334567999999999999997542     24566666655433211            


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh
Q 040531          164 ------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL  237 (285)
Q Consensus       164 ------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                            +...|+.+|.+.+.+++.+++.+   |+.+..+.|+.+..+.........      ..........+.....+.
T Consensus       138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~g~  208 (342)
T d2blla1         138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAAR------IGSSRAITQLILNLVEGS  208 (342)
T ss_dssp             CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSB------SCBCHHHHHHHHHHHHTC
T ss_pred             ccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeecccccccccccccccc------ccccccchHHHHHHHhCC
Confidence                  23569999999999999998874   688899999888876543322110      011112222233333321


Q ss_pred             hc-------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          238 AN-------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       238 ~~-------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      ..       ....++..+|+++++..++........|+.+++.+|
T Consensus       209 ~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         209 PIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             CccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            11       112267899999999999976555556899998544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=7.8e-16  Score=134.59  Aligned_cols=226  Identities=13%  Similarity=0.028  Sum_probs=153.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++.||||||+|.||++++++|.++|++|+++++.+...      .........+..+|+.+.+.+.++++       .+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTE-------GV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence            677899999999999999999999999999998754431      11112345778899999887766543       68


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------  162 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------  162 (285)
                      |.|||.|+....       .....+.....+.+|+.++..++.++..    .+..++|++||.......           
T Consensus        81 d~Vih~a~~~~~-------~~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~  149 (363)
T d2c5aa1          81 DHVFNLAADMGG-------MGFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLK  149 (363)
T ss_dssp             SEEEECCCCCCC-------HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             CeEeeccccccc-------ccccccccccccccccchhhHHHHhHHh----hCccccccccccccccccccccccccccc
Confidence            999999986532       1112344667788999999999888755    344689999997654311           


Q ss_pred             -------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh
Q 040531          163 -------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR  235 (285)
Q Consensus       163 -------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                             .+...|+.+|.+.+.+++.+.+++   ++.+..++|+.+..+........         ..............
T Consensus       150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~---------~~~~~~~~~~~~~~  217 (363)
T d2c5aa1         150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGR---------EKAPAAFCRKAQTS  217 (363)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSC---------CCHHHHHHHHHHHC
T ss_pred             cccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccc---------cccccccccccccc
Confidence                   124579999999999999988774   68999999999987643211100         00111111111111


Q ss_pred             hhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          236 GLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       236 ~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ...       .....++..+|+++++..++...    .|+.+++-+|...+
T Consensus       218 ~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s  264 (363)
T d2c5aa1         218 TDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  264 (363)
T ss_dssp             SSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred             cccccccCCCCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCccc
Confidence            110       01223677889999999888543    46678887776553

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=9.5e-16  Score=133.15  Aligned_cols=240  Identities=14%  Similarity=0.058  Sum_probs=155.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------chhhHHHHHHhh-cCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADID------DAAGIALADSLL-SSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~------~~~~~~~~~~~~-~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      |.||||||+|.||++++++|+++|+.|+.+++.      ........+.+. ....++.++++|++|.+.+..++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            678999999999999999999999999998741      111111111111 1256789999999999999887653   


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------  162 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------  162 (285)
                        ..+++++|.|+....        ..+.++..+.+++|+.++..++.++..    .+-.++++.||.......      
T Consensus        80 --~~~~~i~h~Aa~~~~--------~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAV--------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             --CCEEEEEECCSCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             --cccccccccccccCc--------HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeecccccccc
Confidence              478999999987532        123344567899999999998888744    344578888887554221      


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          163 ------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       163 ------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                            .....|+.+|.+.+...+.+++.  ..++....+.|+.+.++.....+.....    .....-...........
T Consensus       146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  219 (346)
T d1ek6a_         146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQ----GIPNNLMPYVSQVAIGR  219 (346)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCS----SSCCSHHHHHHHHHHTS
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCcccc----ccHHHHHHHHHHHHHcC
Confidence                  13457999999999999887664  3468888888887776543221111000    00000111111111110


Q ss_pred             hh------c--------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          237 LA------N--------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       237 ~~------~--------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      ..      .        ....++.++|+|.++..+.........++++++.+|...
T Consensus       220 ~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         220 REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             CCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence            00      0        011257889999988887655555567888998887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.1e-15  Score=120.51  Aligned_cols=199  Identities=14%  Similarity=0.114  Sum_probs=131.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |..|+++||||+|+||++++++|+++|++|.++.|+.+++...      ....+.++.+|++|.+++.++++       .
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~   67 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------G   67 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------C
Confidence            4568899999999999999999999999999999988774321      23458899999999999877765       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCC----ccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGP----HAY  168 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~----~~Y  168 (285)
                      .|+||+++|.....      ...         +++..+...++++    +++.+-.++|++||.......+..    ..|
T Consensus        68 ~d~vi~~~g~~~~~------~~~---------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~  128 (205)
T d1hdoa_          68 QDAVIVLLGTRNDL------SPT---------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAV  128 (205)
T ss_dssp             CSEEEECCCCTTCC------SCC---------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHH
T ss_pred             CCEEEEEeccCCch------hhh---------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCCcccccccccc
Confidence            89999999864321      111         1223344444444    344556789999987654332222    245


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHH
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKAR  248 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  248 (285)
                      ...|.+.+.+.+       ..+++...|+||.+...-....+.-..                     . .......++.+
T Consensus       129 ~~~~~~~e~~l~-------~~~~~~tiirp~~~~~~~~~~~~~~~~---------------------~-~~~~~~~i~~~  179 (205)
T d1hdoa_         129 TDDHIRMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVTL---------------------D-GRGPSRVISKH  179 (205)
T ss_dssp             HHHHHHHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEES---------------------S-SCSSCSEEEHH
T ss_pred             chHHHHHHHHHH-------hcCCceEEEecceecCCCCcccEEEee---------------------C-CCCCCCcCCHH
Confidence            555555554433       357999999998775422111100000                     0 01123357899


Q ss_pred             HHHHHHHHHhcCCCCcccccEEEecC
Q 040531          249 DIAEAALYLASDESKYISGHNLVVDG  274 (285)
Q Consensus       249 eva~~~~~l~s~~~~~~~G~~i~vdg  274 (285)
                      |+|++++..+.++.  ..|+++.+-+
T Consensus       180 DvA~~~~~~l~~~~--~~g~~~~~s~  203 (205)
T d1hdoa_         180 DLGHFMLRCLTTDE--YDGHSTYPSH  203 (205)
T ss_dssp             HHHHHHHHTTSCST--TTTCEEEEEC
T ss_pred             HHHHHHHHHhCCCC--CCCEEEecCC
Confidence            99999999996543  4588876644

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=2.6e-15  Score=130.13  Aligned_cols=233  Identities=15%  Similarity=0.045  Sum_probs=156.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH---HHhh--cCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA---DSLL--SSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~---~~~~--~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .+-|++|||||+|.||++++++|.+.|++|+.++|....-....   ..+.  ....++.++.+|..|........    
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence            35689999999999999999999999999999986332212111   1111  12356899999999988765443    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----  162 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----  162 (285)
                         ...+.++|.++....        ....++....+++|+.|+..++.++...    +..++|++||.......     
T Consensus        90 ---~~~~~v~~~~a~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~  154 (341)
T d1sb8a_          90 ---AGVDYVLHQAALGSV--------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPK  154 (341)
T ss_dssp             ---TTCSEEEECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             ---ccccccccccccccc--------cccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCc
Confidence               368888888765321        1245667789999999999999988653    34589999997654321     


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhh
Q 040531          163 ------LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRG  236 (285)
Q Consensus       163 ------~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                            .+...|+.+|.+.+.+++.+++..   ++++..++|+.+.++.......          ...-....+.....+
T Consensus       155 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~----------~~~~i~~~~~~~~~g  221 (341)
T d1sb8a_         155 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGA----------YAAVIPKWTSSMIQG  221 (341)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCST----------TCCHHHHHHHHHHHT
T ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCc----------hhhhHHHHHHHHHcC
Confidence                  134789999999999999998875   5888899999888764321110          001111222233222


Q ss_pred             hhc-c------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          237 LAN-L------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       237 ~~~-~------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      -.. .      ...++.++|++.++..++..... ..|+.+++.++...
T Consensus       222 ~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         222 DDVYINGDGETSRDFCYIENTVQANLLAATAGLD-ARNQVYNIAVGGRT  269 (341)
T ss_dssp             CCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCCE
T ss_pred             CceEEcCCCCEEEEEEEEeccchhhhhhhhcccc-ccceeeeecccccc
Confidence            111 1      12256778999998887755433 46778887665543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.67  E-value=3e-15  Score=128.95  Aligned_cols=228  Identities=19%  Similarity=0.188  Sum_probs=145.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh-HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG-IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      .||||||+|.||++++++|+++|++|+++++-.... ......+ ....++.++.+|+++.+++.++++..     .+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~-~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWL-SSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHh-hccCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence            589999999999999999999999999987532222 2222222 23567899999999999998887643     6899


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL------------  163 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~------------  163 (285)
                      |||+|+....        ....++....+++|+.|+.++++++...    +..++++.+|..+..+.+            
T Consensus        76 Vih~aa~~~~--------~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~  143 (338)
T d1orra_          76 CFHLAGQVAM--------TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRY  143 (338)
T ss_dssp             EEECCCCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred             EEeecccccc--------cccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccccccccccccccccc
Confidence            9999987532        1123445788999999999999987653    334455566654433211            


Q ss_pred             ----------------CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHH
Q 040531          164 ----------------GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEE  227 (285)
Q Consensus       164 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                      +...|+.+|...+.+.......+.   +....+.|..+..+........           ....
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  209 (338)
T d1orra_         144 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG---LNTVVFRHSSMYGGRQFATYDQ-----------GWVG  209 (338)
T ss_dssp             EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTCCCBTTB-----------CHHH
T ss_pred             cccccccCcccCCccccccccccccchhhhhhhhhhhccC---cccccccccceeeccccccccc-----------cccc
Confidence                            345789999999999999888764   4444444333322211110000           0111


Q ss_pred             HHHHHHHh---hhhc---------ccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcc
Q 040531          228 EKMEELVR---GLAN---------LKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       228 ~~~~~~~~---~~~~---------~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      .......+   ....         ....++..+|++++++.++.... ...|+.+++.+|..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~-~~~~~~~~i~~~~~  270 (338)
T d1orra_         210 WFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVS-KIRGNAFNIGGTIV  270 (338)
T ss_dssp             HHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHH-HHTTCEEEESSCGG
T ss_pred             hhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccc-cccCcccccccccc
Confidence            11111111   0000         01124568899999988875432 35788888876654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.65  E-value=9.2e-16  Score=132.06  Aligned_cols=223  Identities=16%  Similarity=0.121  Sum_probs=153.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEE------EecCchhhHH-HHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVI------ADIDDAAGIA-LADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~------~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+|||||+|.||++++++|+++|+.|..      .+........ ....+ ....++.++.+|.++........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc------
Confidence            5899999999999999999999986543      3322111111 11111 23567999999999988766442      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-------
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-------  162 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-------  162 (285)
                       ..+|.++|.|+....        ........+.+++|+.++..+++++..    .+..++|+.||.....+.       
T Consensus        75 -~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E  141 (322)
T d1r6da_          75 -RGVDAIVHFAAESHV--------DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTE  141 (322)
T ss_dssp             -TTCCEEEECCSCCCH--------HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred             -cccceEEeecccccc--------cccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCC
Confidence             379999999986432        123445567789999999999998864    345679999997654322       


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhh
Q 040531          163 ----LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLA  238 (285)
Q Consensus       163 ----~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                          .+...|+.+|.+.+.+++.++++.   ++.+..++|+.|..|.....              ......+.....+-.
T Consensus       142 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~--------------~~i~~~i~~~~~~~~  204 (322)
T d1r6da_         142 SSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--------------KLIPLFVTNLLDGGT  204 (322)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--------------SHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcC--------------cHHHHHHHHHHcCCC
Confidence                134689999999999999998874   69999999999988642210              011222233333211


Q ss_pred             cc---cC----CCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          239 NL---KG----VTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       239 ~~---~~----~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      ..   .+    .++..+|+|+++..++....   .|+.+++.+|-..+
T Consensus       205 i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         205 LPLYGDGANVREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             cEEecCCCeEEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence            11   11    24688999999999996654   57888887776543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.7e-15  Score=129.98  Aligned_cols=219  Identities=11%  Similarity=0.041  Sum_probs=144.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |.||||||+|.||++++++|+++|++|+++++....-.+..... ....++.....|+.+.            .+..+|+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH------------HHcCCCE
Confidence            78999999999999999999999999999986332211111111 1234456666666432            1236999


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--------------
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--------------  161 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--------------  161 (285)
                      |||+|+.....        ...++..+.+++|+.+...+++++...     +.++|++||......              
T Consensus        69 VihlAa~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~~~~~~-----~~k~I~~SS~~vy~~~~~~~~~e~~~~~~  135 (312)
T d2b69a1          69 IYHLASPASPP--------NYMYNPIKTLKTNTIGTLNMLGLAKRV-----GARLLLASTSEVYGDPEVHPQSEDYWGHV  135 (312)
T ss_dssp             EEECCSCCSHH--------HHTTCHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEEEGGGGBSCSSSSBCTTCCCBC
T ss_pred             EEECcccCCch--------hHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEEChheecCCCCCCCCccccCCC
Confidence            99999865321        011234667899999999999887543     237999998654421              


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhc
Q 040531          162 --GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLAN  239 (285)
Q Consensus       162 --~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                        ..+...|+.+|.+.+.+++..+.++   |+.+..++|+.|..|.......            .-....+.....+-..
T Consensus       136 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~------------~~i~~~i~~~~~g~~i  200 (312)
T d2b69a1         136 NPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDG------------RVVSNFILQALQGEPL  200 (312)
T ss_dssp             CSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCC------------CHHHHHHHHHHHTCCE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCc------------cHHHHHHHHHHcCCCe
Confidence              1134679999999999999998874   6899999999999875321100            1112223333322111


Q ss_pred             c-------cCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCcccc
Q 040531          240 L-------KGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTTS  279 (285)
Q Consensus       240 ~-------~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~~  279 (285)
                      +       ...++..+|++++++.++...    .+..+++.+|...+
T Consensus       201 ~i~~~g~~~r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~~  243 (312)
T d2b69a1         201 TVYGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT  243 (312)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred             EEeCCCCeeEccEEHHHHHHHHHHHHhhc----cCCceEecCCcccc
Confidence            1       113567899999998888543    34567877776553

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.63  E-value=5.4e-15  Score=128.55  Aligned_cols=176  Identities=16%  Similarity=0.053  Sum_probs=132.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++||+||||||+|.||++++++|+++|+.|++++|+......+.+.. .....+.++.+|++|.+.+.++.+..     .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF-----Q   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----h
Confidence            68999999999999999999999999999999999877655544433 22456899999999999988876643     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------  161 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------  161 (285)
                      +|+++|.|+....        ....+.....+++|+.++..++.++...-   ....+++.|+......           
T Consensus        80 ~~~v~~~aa~~~~--------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~  148 (356)
T d1rkxa_          80 PEIVFHMAAQPLV--------RLSYSEPVETYSTNVMGTVYLLEAIRHVG---GVKAVVNITSDKCYDNKEWIWGYRENE  148 (356)
T ss_dssp             CSEEEECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHHC---CCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred             hhhhhhhhccccc--------cccccCCccccccccccchhhhhhhhccc---ccccccccccccccccccccccccccc
Confidence            8999999886422        12345567789999999999998886632   2344555554433321           


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHhCC------CCcEEEEEeCCCccchh
Q 040531          162 -GLGPHAYTVSKHAIVGLTKNTACELGK------YGIRVNCISPFGVATSM  205 (285)
Q Consensus       162 -~~~~~~Y~asKaa~~~l~~~la~e~~~------~~i~v~~v~pg~v~t~~  205 (285)
                       ..+...|+.+|.+.+.+++.++.++..      +++.+..+.|+.+..|.
T Consensus       149 ~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         149 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence             113456999999999999999887643      36788899998887653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.63  E-value=2.7e-15  Score=130.35  Aligned_cols=219  Identities=16%  Similarity=0.111  Sum_probs=142.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc--hhh-HHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD--AAG-IALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~--~~~-~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -|.||||||+|.||++++++|++.|+.|.++.++.  ... ......+  ...++.++.+|++|.+.+..++.       
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~-------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHh-------
Confidence            47899999999999999999999998755554321  110 0111111  24679999999999988887754       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC----------
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG----------  161 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~----------  161 (285)
                      ..|.++|.|+.....        ....+..+.+++|+.+...++.++...-     .++|++||......          
T Consensus        73 ~~~~v~~~a~~~~~~--------~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~vyg~~~~~~~~~~~  139 (346)
T d1oc2a_          73 KADAIVHYAAESHND--------NSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEVYGDLPLREDLPGH  139 (346)
T ss_dssp             TCSEEEECCSCCCHH--------HHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             hhhhhhhhhhccccc--------chhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceEecccCcccccccc
Confidence            678899998764321        1223345778999999999998775532     35777776643311          


Q ss_pred             -------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHH
Q 040531          162 -------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEE  228 (285)
Q Consensus       162 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                                   ..+.+.|+.+|.+.+.+++.+..++   ++++.++.|+.+..|.....              .....
T Consensus       140 ~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~--------------~~~~~  202 (346)
T d1oc2a_         140 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE--------------KFIPR  202 (346)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT--------------SHHHH
T ss_pred             ccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCcc--------------chhHH
Confidence                         1123569999999999999988774   79999999999988642110              11112


Q ss_pred             HHHHHHhhhh-------cccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          229 KMEELVRGLA-------NLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       229 ~~~~~~~~~~-------~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      .+.....+..       .....++..+|++++++.+.....   .|..+++-+|
T Consensus       203 ~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~  253 (346)
T d1oc2a_         203 QITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR---MGETYLIGAD  253 (346)
T ss_dssp             HHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCS
T ss_pred             HHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc---cCcccccccc
Confidence            2222222211       111225788999999988775443   3444444433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=4.4e-15  Score=127.10  Aligned_cols=152  Identities=13%  Similarity=0.123  Sum_probs=117.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      -|.||||||+|.||++++++|+++|+.+++++++.+                    +|+.+.+.+..+++.     ..+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~-----~~~d   56 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFAS-----ERID   56 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHH-----HCCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhh-----cCCC
Confidence            468999999999999999999999999887764321                    589999888877653     2699


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC------------
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG------------  162 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~------------  162 (285)
                      .++|+|+.....       ........+.+++|+.++..+++++...    +-.++|++||.+.+.+.            
T Consensus        57 ~v~~~a~~~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~  125 (315)
T d1e6ua_          57 QVYLAAAKVGGI-------VANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQ  125 (315)
T ss_dssp             EEEECCCCCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred             EEEEcchhcccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCCCCccCCcccc
Confidence            999998764321       1123445567889999999999988553    34579999997764321            


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          163 ----LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       163 ----~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                          +....|+.+|.+.+.+++.+.++.   |+++..+.|+.|..|.
T Consensus       126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         126 GTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             SCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence                112469999999999999998874   6999999999998764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.59  E-value=8.2e-14  Score=122.47  Aligned_cols=174  Identities=21%  Similarity=0.213  Sum_probs=124.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHH-CCCeEEEEec---------CchhhHHHHHHhh---c-----CCCceEEEeccCCCH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVK-HGAKVVIADI---------DDAAGIALADSLL---S-----SSPLVTYLHCDVSLE   76 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~r---------~~~~~~~~~~~~~---~-----~~~~v~~~~~D~s~~   76 (285)
                      ++.||||||+|.||++++++|++ .|++|+++|+         +.+..+.....+.   .     ....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            56799999999999999999986 6899999874         1111112211111   1     123588999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           77 QDIQNLINVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        77 ~~i~~~~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      +.++++++    ...++|+|+|.|+....        ....+.....+++|+.+...++.++..    .+..+++++++.
T Consensus        82 ~~l~~~~~----~~~~~d~ViH~Aa~~~~--------~~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~  145 (383)
T d1gy8a_          82 DFLNGVFT----RHGPIDAVVHMCAFLAV--------GESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSA  145 (383)
T ss_dssp             HHHHHHHH----HSCCCCEEEECCCCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEG
T ss_pred             HHhhhhhh----ccceeehhhcccccccc--------cccccccccccccccccccccchhhhc----cCCccccccccc
Confidence            98888765    34578999999986532        112344566788999999999988765    334567766665


Q ss_pred             ccccC------------------CCCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhh
Q 040531          157 ASLMG------------------GLGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLV  207 (285)
Q Consensus       157 ~~~~~------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~  207 (285)
                      .....                  ..+...|+.+|.+.+.+++.+...   +|+.+.+++|+.+..|...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         146 AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTT
T ss_pred             ccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCcc
Confidence            44321                  113467999999999999998876   4689999999988876543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.7e-15  Score=123.22  Aligned_cols=198  Identities=12%  Similarity=0.081  Sum_probs=134.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .|++|++|||||+|.||++++++|+++|.  +|++++|++.....      .....+....+|+.+.+++..       .
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~-------~   77 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYAS-------A   77 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGG-------G
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccc-------c
Confidence            47899999999999999999999999995  79999997654321      112457777888877655433       3


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccch
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYT  169 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~  169 (285)
                      +...|+++|++|...           .........++|+.++..+++.+..    .+-.++|++|+.....  .....|+
T Consensus        78 ~~~~d~vi~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~--~~~~~Y~  140 (232)
T d2bkaa1          78 FQGHDVGFCCLGTTR-----------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK--SSNFLYL  140 (232)
T ss_dssp             GSSCSEEEECCCCCH-----------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHH
T ss_pred             ccccccccccccccc-----------cccchhhhhhhcccccceeeecccc----cCccccccCCcccccc--CccchhH
Confidence            347999999998531           2334556678899999998888754    4456799999986543  2345799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCc-EEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHH-HHHHhhhhc--ccCCCC
Q 040531          170 VSKHAIVGLTKNTACELGKYGI-RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKM-EELVRGLAN--LKGVTL  245 (285)
Q Consensus       170 asKaa~~~l~~~la~e~~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~  245 (285)
                      .+|...+..++.       .+. ++..++||.+..+......                .+.+ .........  .....+
T Consensus       141 ~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~I  197 (232)
T d2bkaa1         141 QVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRP----------------GEWLVRKFFGSLPDSWASGHSV  197 (232)
T ss_dssp             HHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSH----------------HHHHHHHHHCSCCTTGGGGTEE
T ss_pred             HHHHHhhhcccc-------ccccceEEecCceeecCCCcCcH----------------HHHHHHHHhhccCCcccCCCeE
Confidence            999988876543       233 4677899999886433210                0111 111111111  112346


Q ss_pred             CHHHHHHHHHHHhcCCC
Q 040531          246 KARDIAEAALYLASDES  262 (285)
Q Consensus       246 ~~eeva~~~~~l~s~~~  262 (285)
                      +++|+|++++.++.+..
T Consensus       198 ~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         198 PVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             EHHHHHHHHHHHHTSCC
T ss_pred             EHHHHHHHHHHHHhcCc
Confidence            78999999888875543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=1.5e-14  Score=118.30  Aligned_cols=219  Identities=11%  Similarity=-0.001  Sum_probs=136.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCe--EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAK--VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++||||||+|.||++++++|+++|+.  |+.+.|+++....    +   ..++.++.+|+++.+++.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~---~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I---GGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T---TCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c---cCCcEEEEeeeccccccccccc-------cc
Confidence            68999999999999999999999976  5556676654332    1   4567899999999998877654       68


Q ss_pred             cEEEECCCCCCCCCCC-----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           94 DILFNNAGVLGNQSKH-----KSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      |.+||+++........     ..........+.....+|+.+...++.......    .+...+.++.....+......+
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTTCGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCCcccccc
Confidence            9999999875421110     011111223345567788988888777665543    4667777776555443333222


Q ss_pred             h-hhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCH
Q 040531          169 T-VSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKA  247 (285)
Q Consensus       169 ~-asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      . ..+.........+..+   .++++..++||.+..+.......-.    .. .             ..........+.+
T Consensus       146 ~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~----~~-~-------------~~~~~~~~~~i~~  204 (252)
T d2q46a1         146 GNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLV----GK-D-------------DELLQTDTKTVPR  204 (252)
T ss_dssp             GGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEE----ES-T-------------TGGGGSSCCEEEH
T ss_pred             cccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhh----cc-C-------------cccccCCCCeEEH
Confidence            2 2223333333333333   5789999999998776532111000    00 0             0001112335689


Q ss_pred             HHHHHHHHHHhcCCCCcccccEEEecCC
Q 040531          248 RDIAEAALYLASDESKYISGHNLVVDGG  275 (285)
Q Consensus       248 eeva~~~~~l~s~~~~~~~G~~i~vdgG  275 (285)
                      +|+|++++.++..+.  ..|+++++-++
T Consensus       205 ~Dva~a~~~~l~~~~--~~g~~~~i~~~  230 (252)
T d2q46a1         205 ADVAEVCIQALLFEE--AKNKAFDLGSK  230 (252)
T ss_dssp             HHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             HHHHHHHHHHhCCcc--ccCcEEEEeeC
Confidence            999999999886543  47889987543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.29  E-value=1.5e-12  Score=104.88  Aligned_cols=190  Identities=15%  Similarity=0.093  Sum_probs=118.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      -|.+|||||||.||++++++|+++|+  .|+...|+...          ...++   ..+..|..++..      .....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~~~------~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAELLP------QLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHHGG------GCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhhhh------ccccc
Confidence            48999999999999999999999997  45555554322          12333   334444333211      22356


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhhH
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVSK  172 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~asK  172 (285)
                      +|.+|+++|....          .........++|+.++..+++++..    .+..+++++||.++..  .....|..+|
T Consensus        63 ~d~vi~~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~--~~~~~y~~~K  126 (212)
T d2a35a1          63 IDTAFCCLGTTIK----------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRVK  126 (212)
T ss_dssp             CSEEEECCCCCHH----------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHH
T ss_pred             hheeeeeeeeecc----------ccccccccccchhhhhhhccccccc----cccccccccccccccc--ccccchhHHH
Confidence            8999999886421          1112346788899999888887643    4557899999976643  3346799999


Q ss_pred             HHHHHHHHHHHHHhCCCCc-EEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGI-RVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      ...+..++       ..+. +...++|+.|..+........   .... .........    +        +.+..+|+|
T Consensus       127 ~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~---~~~~-~~~~~~~~~----~--------~~i~v~DvA  183 (212)
T d2a35a1         127 GELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAE---ILAA-PIARILPGK----Y--------HGIEACDLA  183 (212)
T ss_dssp             HHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGG---GTTC-CCC----CH----H--------HHHHHHHHH
T ss_pred             HHHhhhcc-------ccccccceeeCCcceeCCcccccHHH---HHHH-HHhhccCCC----C--------cEEEHHHHH
Confidence            88876554       2233 577889999987653321111   0000 000000000    0        114679999


Q ss_pred             HHHHHHhcCCC
Q 040531          252 EAALYLASDES  262 (285)
Q Consensus       252 ~~~~~l~s~~~  262 (285)
                      ++++.++.++.
T Consensus       184 ~ai~~~~~~~~  194 (212)
T d2a35a1         184 RALWRLALEEG  194 (212)
T ss_dssp             HHHHHHHTCCC
T ss_pred             HHHHHHHcCCC
Confidence            99999986654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.29  E-value=6e-11  Score=98.89  Aligned_cols=183  Identities=15%  Similarity=0.124  Sum_probs=120.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.+|||||+|.||++++++|.++|++|+.++|+.                     +|++|.++++++++..     .+|+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            4589999999999999999999999999998753                     5899999998877643     6899


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CCC
Q 040531           96 LFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GLG  164 (285)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~~  164 (285)
                      |||+|+....        +.........++.|+.....+.......     ...+++.||......           ..+
T Consensus        56 vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~  122 (281)
T d1vl0a_          56 VINCAAHTAV--------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNP  122 (281)
T ss_dssp             EEECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             EEeecccccc--------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccc
Confidence            9999886432        1123334566778887777776665443     234555555433211           123


Q ss_pred             CccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhh-----hc
Q 040531          165 PHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGL-----AN  239 (285)
Q Consensus       165 ~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  239 (285)
                      ...|+.+|.+.+.+++.       .+.....+.|+.+..+-....                 ...+.......     ..
T Consensus       123 ~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~-----------------~~~~~~~~~~~~~~~~~~  178 (281)
T d1vl0a_         123 QSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFV-----------------KTMINLGKTHDELKVVHD  178 (281)
T ss_dssp             CSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHH-----------------HHHHHHHHHCSEEEEESS
T ss_pred             hhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccc-----------------cchhhhhccCCceeecCC
Confidence            45688888888776644       245677899999876542211                 11122222110     11


Q ss_pred             ccCCCCCHHHHHHHHHHHhcCC
Q 040531          240 LKGVTLKARDIAEAALYLASDE  261 (285)
Q Consensus       240 ~~~~~~~~eeva~~~~~l~s~~  261 (285)
                      .....+..+|+++++.+++...
T Consensus       179 ~~~~~i~v~D~~~~~~~~~~~~  200 (281)
T d1vl0a_         179 QVGTPTSTVDLARVVLKVIDEK  200 (281)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHT
T ss_pred             ceeccchhhhhhhhhhhhhhhc
Confidence            1123568889999998888554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.25  E-value=6.7e-11  Score=99.78  Aligned_cols=217  Identities=9%  Similarity=-0.016  Sum_probs=121.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH-HHHhh-cCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL-ADSLL-SSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~-~~~~~-~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++||||||+|.||++++++|+++|++|+++.|+....... .+.+. .....+.++++|++|.+++...++       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            4599999999999999999999999999999875432111 11111 124568899999999988877654       67


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCC-CCccchhhH
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGL-GPHAYTVSK  172 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~-~~~~Y~asK  172 (285)
                      +.++++++....                   ..|..+...++.++..    ....++++.||.+.....+ ....|...+
T Consensus        77 ~~~~~~~~~~~~-------------------~~~~~~~~~~l~~a~~----~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~  133 (312)
T d1qyda_          77 DVVISALAGGVL-------------------SHHILEQLKLVEAIKE----AGNIKRFLPSEFGMDPDIMEHALQPGSIT  133 (312)
T ss_dssp             SEEEECCCCSSS-------------------STTTTTHHHHHHHHHH----SCCCSEEECSCCSSCTTSCCCCCSSTTHH
T ss_pred             chhhhhhhhccc-------------------ccchhhhhHHHHHHHH----hcCCcEEEEeeccccCCCcccccchhhhh
Confidence            888888765321                   1233344444444432    3455677777764432221 122233344


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHHH
Q 040531          173 HAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIAE  252 (285)
Q Consensus       173 aa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva~  252 (285)
                      ......+..+..+   .++....+.|+.+..+...............   .... .     .-.-......++.++|+|+
T Consensus       134 ~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~---~~~~-~-----~~~~g~~~~~~i~v~Dva~  201 (312)
T d1qyda_         134 FIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPP---RDKV-L-----IYGDGNVKGIWVDEDDVGT  201 (312)
T ss_dssp             HHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCC---SSEE-C-----CBTTSCSEEEEECHHHHHH
T ss_pred             hHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhc---cccc-c-----cccccccccceeeHHHHHH
Confidence            4333333333333   4677888899888765433211110000000   0000 0     0000011122578999999


Q ss_pred             HHHHHhcCCCCccccc-EEEecCCc
Q 040531          253 AALYLASDESKYISGH-NLVVDGGF  276 (285)
Q Consensus       253 ~~~~l~s~~~~~~~G~-~i~vdgG~  276 (285)
                      +++.++.+..  ..|+ .+.+.++-
T Consensus       202 a~~~~l~~~~--~~~~~~~~~~~~~  224 (312)
T d1qyda_         202 YTIKSIDDPQ--TLNKTMYIRPPMN  224 (312)
T ss_dssp             HHHHHTTCGG--GSSSEEECCCGGG
T ss_pred             HHHHHhcCcc--ccCceEEEeCCCc
Confidence            9999885542  2344 34454443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.19  E-value=2.2e-10  Score=95.87  Aligned_cols=215  Identities=13%  Similarity=0.088  Sum_probs=122.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH--HHHhhc-CCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL--ADSLLS-SSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~--~~~~~~-~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .|.+|||||+|.||++++++|++.|++|++++|+.......  ...+.. ....+.++.+|+.+.+.....++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            47799999999999999999999999999999875543211  111111 13457889999999988777654       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchhh
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTVS  171 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~as  171 (285)
                      ..+.++++++...                       ..+...+.+++..    ....++++.||............+...
T Consensus        76 ~~~~vi~~~~~~~-----------------------~~~~~~~~~a~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          76 NVDVVISTVGSLQ-----------------------IESQVNIIKAIKE----VGTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             TCSEEEECCCGGG-----------------------SGGGHHHHHHHHH----HCCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             hceeeeecccccc-----------------------cchhhHHHHHHHH----hccccceeeeccccccccccccccccc
Confidence            5888999876431                       1122233344332    234456777765443333333334444


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHhhhhcccCCCCCHHHHH
Q 040531          172 KHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVRGLANLKGVTLKARDIA  251 (285)
Q Consensus       172 Kaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeva  251 (285)
                      +............+   .++....+.|+.+..+...................          .-.-......++..+|+|
T Consensus       129 ~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~v~Dva  195 (307)
T d1qyca_         129 VFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVV----------ILGDGNARVVFVKEEDIG  195 (307)
T ss_dssp             HHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEE----------EETTSCCEEEEECHHHHH
T ss_pred             cccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccce----------eeecccccccCCcHHHHH
Confidence            44433333333333   46778889999988765432211100000000000          000001122357899999


Q ss_pred             HHHHHHhcCCCCcccccEEEecCCcc
Q 040531          252 EAALYLASDESKYISGHNLVVDGGFT  277 (285)
Q Consensus       252 ~~~~~l~s~~~~~~~G~~i~vdgG~~  277 (285)
                      ++++.++..... ..+..+++.+|..
T Consensus       196 ~~~~~~l~~~~~-~~~~~~~~~~~~~  220 (307)
T d1qyca_         196 TFTIKAVDDPRT-LNKTLYLRLPANT  220 (307)
T ss_dssp             HHHHTTSSCGGG-TTEEEECCCGGGE
T ss_pred             HHHHHHhcChhh-cCceeEEeCCCCc
Confidence            999998865432 2333344444443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.16  E-value=5.9e-11  Score=99.54  Aligned_cols=129  Identities=15%  Similarity=0.126  Sum_probs=92.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      .+|||||+|.||++++++|.+.|. ++.++++...                 +.+|++|.+.++++++..     .+|+|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V   58 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI   58 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence            599999999999999999999886 4445544322                 347999999998887654     69999


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC-----------CCC
Q 040531           97 FNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG-----------LGP  165 (285)
Q Consensus        97 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~-----------~~~  165 (285)
                      ||+||.....        ...+.-...+++|+.+...+..+..     ..+.+++++||.....+.           .+.
T Consensus        59 ih~Aa~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~  125 (298)
T d1n2sa_          59 VNAAAHTAVD--------KAESEPELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPL  125 (298)
T ss_dssp             EECCCCCCHH--------HHTTCHHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred             EEeccccccc--------ccccCccccccccccccccchhhhh-----ccccccccccccccccCCCCCCCccccccCCC
Confidence            9999875321        1122335678899999988888762     334677777776543221           134


Q ss_pred             ccchhhHHHHHHHHHH
Q 040531          166 HAYTVSKHAIVGLTKN  181 (285)
Q Consensus       166 ~~Y~asKaa~~~l~~~  181 (285)
                      ..|+.+|.+.+.+.+.
T Consensus       126 ~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         126 NVYGKTKLAGEKALQD  141 (298)
T ss_dssp             SHHHHHHHHHHHHHHH
T ss_pred             chHhhhhhhhhhhHHh
Confidence            5799999988876644

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.11  E-value=1.9e-09  Score=92.74  Aligned_cols=151  Identities=13%  Similarity=0.036  Sum_probs=98.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHH-HHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDI-QNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i-~~~~~~i~~~~~~   92 (285)
                      +.|+++||||+|.||++++++|+++|++|+++.|+.......  .+ .....+.++++|+.|..++ +.+       +..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~-~~~~~v~~~~gD~~d~~~~~~~a-------~~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--EL-QAIPNVTLFQGPLLNNVPLMDTL-------FEG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HH-HTSTTEEEEESCCTTCHHHHHHH-------HTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hh-cccCCCEEEEeeCCCcHHHHHHH-------hcC
Confidence            578999999999999999999999999999999987664321  22 1245688999999986553 322       346


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC--CCCCccchh
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG--GLGPHAYTV  170 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~--~~~~~~Y~a  170 (285)
                      .|.++++......                    .++.....++.++..    .+..++++.||......  ......|..
T Consensus        72 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~aa~~----agv~~~v~~Ss~~~~~~~~~~~~~~~~~  127 (350)
T d1xgka_          72 AHLAFINTTSQAG--------------------DEIAIGKDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWA  127 (350)
T ss_dssp             CSEEEECCCSTTS--------------------CHHHHHHHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTH
T ss_pred             CceEEeecccccc--------------------hhhhhhhHHHHHHHH----hCCCceEEEeeccccccCCcccchhhhh
Confidence            8888776543210                    112222334444432    33456777777654432  233456777


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                      +|...+.+.+.       .++....+.|+.+..+.
T Consensus       128 ~k~~~~~~~~~-------~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         128 PKFTVENYVRQ-------LGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HHHHHHHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred             hHHHHHHHHHh-------hccCceeeeeceeeccc
Confidence            88777665543       34677788888765543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.10  E-value=5.2e-15  Score=117.85  Aligned_cols=171  Identities=11%  Similarity=0.012  Sum_probs=94.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceE--------------EEeccCCCHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVT--------------YLHCDVSLEQDIQNL   82 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~--------------~~~~D~s~~~~i~~~   82 (285)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++........              ...........+...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            477888889999999999999999999999999999999888864322211              122222222222222


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCC
Q 040531           83 INVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGG  162 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~  162 (285)
                      .. ...................                 .....+..+...+.+.....+........+++.+.......
T Consensus        82 ~~-~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (212)
T d1jaya_          82 RD-LKNILREKIVVSPLVPVSR-----------------GAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANL  143 (212)
T ss_dssp             HH-THHHHTTSEEEECCCCEEC-----------------CTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCT
T ss_pred             HH-hhhhhcccccccccccccc-----------------ccccccccccchhhhhhhhhhhhhcccccceeecHHHhcCc
Confidence            11 1111111111111111110                 00111111222222333333433333444444444444444


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchh
Q 040531          163 LGPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSM  205 (285)
Q Consensus       163 ~~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~  205 (285)
                      +....|...+++.....+..+.++....+.++.++||.+++..
T Consensus       144 ~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~  186 (212)
T d1jaya_         144 DEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR  186 (212)
T ss_dssp             TCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred             ccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence            4455677777777777777777766667888999999887643

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=1.1e-09  Score=91.75  Aligned_cols=218  Identities=16%  Similarity=0.165  Sum_probs=124.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH--HHcCCcc
Q 040531           18 AIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI--SKHGRLD   94 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~--~~~~~id   94 (285)
                      ||||||+|.||++++++|+++|+ .|+++++-.... +..... +      ...+|..+.+..   .+.+.  ..+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~~~-~------~~~~~~~~~~~~---~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVNLV-D------LNIADYMDKEDF---LIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHHHH-T------SCCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhccc-c------cchhhhccchHH---HHHHhhhhcccchh
Confidence            79999999999999999999996 587776332221 111111 0      112233333332   22222  2345788


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC-----------CC
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG-----------GL  163 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~-----------~~  163 (285)
                      +++|.|+....       ...   ......+.|+.+...++.+....-     -++++.||.....+           .+
T Consensus        71 ~i~~~aa~~~~-------~~~---~~~~~~~~~~~~~~~~l~~~~~~~-----i~~v~~ss~~~~~~~~~~~~~~~~~~~  135 (307)
T d1eq2a_          71 AIFHEGACSST-------TEW---DGKYMMDNNYQYSKELLHYCLERE-----IPFLYASSAATYGGRTSDFIESREYEK  135 (307)
T ss_dssp             EEEECCSCCCT-------TCC---CHHHHHHHTHHHHHHHHHHHHHHT-----CCEEEEEEGGGGTTCCSCBCSSGGGCC
T ss_pred             hhhhhcccccc-------ccc---cccccccccccccccccccccccc-----ccccccccccccccccccccccccccc
Confidence            99998875322       111   234567788888888877765532     23555555444332           12


Q ss_pred             CCccchhhHHHHHHHHHHHHHHhCCCCcEEEEEeCCCccchhhhhhhcccccccCCCCCchHHHHHHHHHHh--------
Q 040531          164 GPHAYTVSKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWKSCEDCMDSGKPCEEEEEKMEELVR--------  235 (285)
Q Consensus       164 ~~~~Y~asKaa~~~l~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  235 (285)
                      +...|+.+|.+.+.+++.++.+   +++.+..+.|..+..|........        .  ............        
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~  202 (307)
T d1eq2a_         136 PLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSM--------A--SVAFHLNTQLNNGESPKLFE  202 (307)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGG--------S--CHHHHHHHHHHC--------
T ss_pred             cccccccccchhhhhccccccc---cccccccccceeEeeccccccccc--------c--ccccccccccccccceeeec
Confidence            4568999999999999988765   567888888888877643211100        0  000000111110        


Q ss_pred             hhhcccCCCCCHHHHHHHHHHHhcCCCCcccccEEEecCCccc
Q 040531          236 GLANLKGVTLKARDIAEAALYLASDESKYISGHNLVVDGGFTT  278 (285)
Q Consensus       236 ~~~~~~~~~~~~eeva~~~~~l~s~~~~~~~G~~i~vdgG~~~  278 (285)
                      +-......++.+++++.++..++....    ...+++.+|...
T Consensus       203 g~~~~~r~~~~v~d~~~~~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         203 GSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             -----CBCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             CccceeeeeeecccHHHHHHHHhhhcc----ccccccccccch
Confidence            001112234678899999988775542    245666666544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=1.4e-05  Score=61.12  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.++||+||+|++|...+......|++|+.+++++++.+.+ .++   +... +  .|.++.+-.+++.+.. . ...+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~---Ga~~-v--i~~~~~~~~~~i~~~t-~-~~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAHE-V--FNHREVNYIDKIKKYV-G-EKGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE-E--EETTSTTHHHHHHHHH-C-TTCE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-ccc---Cccc-c--cccccccHHHHhhhhh-c-cCCc
Confidence            689999999999999999999889999999999887665433 333   3332 2  3666644333322211 1 2359


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (174)
T d1yb5a2          99 DIIIEMLA  106 (174)
T ss_dssp             EEEEESCH
T ss_pred             eEEeeccc
Confidence            99999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.08  E-value=6.8e-06  Score=63.10  Aligned_cols=105  Identities=18%  Similarity=0.143  Sum_probs=68.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.++||+||+||+|...+......|++|+.+.+++++.+.+ .++   +.+.. +  |-++.  ..+.+..  ...+++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~-~~l---Ga~~v-i--~~~~~--~~~~~~~--~~~~gv   99 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVL---GAKEV-L--AREDV--MAERIRP--LDKQRW   99 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHT---TCSEE-E--ECC-------------CCSCCE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH-Hhc---cccee-e--ecchh--HHHHHHH--hhccCc
Confidence            488999999999999999988889999999999988875444 333   33322 2  22221  1121111  123479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccC
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMG  161 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~  161 (285)
                      |+++.+.|..                              .+...+..++  ..|+++.++...+..+
T Consensus       100 D~vid~vgg~------------------------------~~~~~l~~l~--~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2         100 AAAVDPVGGR------------------------------TLATVLSRMR--YGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             EEEEECSTTT------------------------------THHHHHHTEE--EEEEEEECSCCSSSCC
T ss_pred             CEEEEcCCch------------------------------hHHHHHHHhC--CCceEEEeecccCccc
Confidence            9999998742                              1344556663  4799999998766543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=2e-05  Score=60.68  Aligned_cols=84  Identities=18%  Similarity=0.114  Sum_probs=63.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHH---HhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALAD---SLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~---~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .++++|+|+|.|+ ||.|++++..|++.|.+ ++++.|+.+...++..   .+... ........|+.+.+++.....  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhhc--
Confidence            4789999999999 68899999999999975 8889998776665443   33222 224456789998887765543  


Q ss_pred             HHHcCCccEEEECCCCC
Q 040531           87 ISKHGRLDILFNNAGVL  103 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (285)
                           ..|++||+....
T Consensus        90 -----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -----SADILTNGTKVG  101 (182)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----ccceeccccCCc
Confidence                 689999997653

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.04  E-value=1.2e-05  Score=62.46  Aligned_cols=87  Identities=16%  Similarity=0.126  Sum_probs=56.1

Q ss_pred             CCcEEEE-ecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH-HcC
Q 040531           14 EGKIAIV-TGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS-KHG   91 (285)
Q Consensus        14 ~~k~vlI-tGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~-~~~   91 (285)
                      +|.+++| +||+|++|.+.+...-..|++|+.+.|+.+..++..+.+.+.+....+. -|-.+..+....+.++.+ ..+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccC
Confidence            4665555 7999999999998888889999999888777666665555445443322 211111222333333333 345


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      .+|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.03  E-value=4e-05  Score=58.06  Aligned_cols=82  Identities=23%  Similarity=0.176  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC-C
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG-R   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~-~   92 (285)
                      .|.+++|+| +|+||...+..+...|++|+++++++++++.+.+ +   +.... +..|-.+ ++.....+.+.+..+ .
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~---ga~~~-~~~~~~~-~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C---GADVT-LVVDPAK-EEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCSEE-EECCTTT-SCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c---CCcEE-Eeccccc-cccchhhhhhhcccccC
Confidence            588999997 6899999999888999999999999998655443 3   33322 2223222 233344455555543 6


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.00  E-value=1.9e-05  Score=60.12  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .+|.++|.|| |.+|+.+|+.|+++|++|++++|+.+.++++.++.    ........+..+.......+.       ..
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~   68 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   68 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------cc
Confidence            3689999987 99999999999999999999999999988776644    345556667766666555543       56


Q ss_pred             cEEEECC
Q 040531           94 DILFNNA  100 (285)
Q Consensus        94 d~lv~~a  100 (285)
                      |.++...
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            7676643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.88  E-value=4e-05  Score=58.87  Aligned_cols=104  Identities=18%  Similarity=0.183  Sum_probs=69.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.++||+||+|++|...+......|++|+.+.+++++.+.+.+ +   +....+..-|-...+.+   .+.  .....+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~---Ga~~vi~~~~~~~~~~~---~~~--~~~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-I---GFDAAFNYKTVNSLEEA---LKK--ASPDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSEEEETTSCSCHHHH---HHH--HCTTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-h---hhhhhcccccccHHHHH---HHH--hhcCCC
Confidence            59999999999999999999999999999999998876544332 2   33433332333222322   221  122469


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      |+++.+.|.                              ..++..++.+  +..|+++.++....
T Consensus       100 d~v~D~vG~------------------------------~~~~~~~~~l--~~~G~~v~~G~~~~  132 (182)
T d1v3va2         100 DCYFDNVGG------------------------------EFLNTVLSQM--KDFGKIAICGAISV  132 (182)
T ss_dssp             EEEEESSCH------------------------------HHHHHHGGGE--EEEEEEEECCCGGG
T ss_pred             ceeEEecCc------------------------------hhhhhhhhhc--cCCCeEEeecceee
Confidence            999998772                              1245556666  34689998876554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.87  E-value=7.9e-05  Score=55.93  Aligned_cols=74  Identities=19%  Similarity=0.359  Sum_probs=56.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      +++++.+||.|+ |++|+.+++.|...|+ ++.++.|+.++.+++.+++.   .  .++  ++   +++...+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~--~~~--~~---~~~~~~l-------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---G--EAV--RF---DELVDHL-------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---C--EEC--CG---GGHHHHH-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---c--ccc--cc---hhHHHHh-------
Confidence            789999999998 9999999999999998 48899999899888887762   2  222  22   2333322       


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|+||++.+..
T Consensus        83 ~~~Divi~atss~   95 (159)
T d1gpja2          83 ARSDVVVSATAAP   95 (159)
T ss_dssp             HTCSEEEECCSSS
T ss_pred             ccCCEEEEecCCC
Confidence            3699999998753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.84  E-value=3.2e-05  Score=56.18  Aligned_cols=72  Identities=14%  Similarity=0.193  Sum_probs=58.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      +.++|.|+ |.+|+.+++.|.+.|+.|++++.+++..+.+.++.     .+.++..|.++++.++++-      ....|.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~   68 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADM   68 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhh
Confidence            36889998 99999999999999999999999999887765543     3678999999988876651      135777


Q ss_pred             EEEC
Q 040531           96 LFNN   99 (285)
Q Consensus        96 lv~~   99 (285)
                      ++..
T Consensus        69 vv~~   72 (132)
T d1lssa_          69 YIAV   72 (132)
T ss_dssp             EEEC
T ss_pred             hccc
Confidence            7774

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=0.00046  Score=52.06  Aligned_cols=80  Identities=19%  Similarity=0.222  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc-C
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH-G   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~-~   91 (285)
                      +|.+++|.|+ |++|...+..+...|+ +|+++++++++++... ++   +.. .++..+-.+..+..+.   +...+ .
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~---Ga~-~~~~~~~~~~~~~~~~---~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GAD-LVLQISKESPQEIARK---VEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCS-EEEECSSCCHHHHHHH---HHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh---CCc-cccccccccccccccc---ccccCCC
Confidence            5789999987 9999999999999998 6999999988876543 33   333 3333344444444433   33333 4


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.++|.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            69999999884

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=7.2e-05  Score=56.79  Aligned_cols=77  Identities=14%  Similarity=0.149  Sum_probs=58.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+++||.+||.|+ ||.+++++..|.+.|.++.++.|+.++.+++.+.+.... .+..+..|  +.            ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~------------~~   77 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL------------EG   77 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG------------TT
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc------------cc
Confidence            4678999999997 778999999999999999999999999988888775432 23332222  10            12


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|++||+....
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            3689999987553

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=6.3e-05  Score=57.40  Aligned_cols=79  Identities=11%  Similarity=0.146  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|++|..++......|++|+.+++++++.+.+. ++   +.. .+  +|.++.+-.+++ .++- ....+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~-~v--i~~~~~d~~~~v-~~~t-~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAW-QV--INYREEDLVERL-KEIT-GGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS-EE--EETTTSCHHHHH-HHHT-TTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCe-EE--EECCCCCHHHHH-HHHh-CCCCe
Confidence            5899999999999999999999999999999999988865543 34   323 22  366654333332 2221 23468


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (179)
T d1qora2          99 RVVYDSVG  106 (179)
T ss_dssp             EEEEECSC
T ss_pred             EEEEeCcc
Confidence            99999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.62  E-value=0.00021  Score=54.57  Aligned_cols=81  Identities=14%  Similarity=0.188  Sum_probs=54.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc-
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH-   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~-   90 (285)
                      -+|.++||+|+ |+||...+..+...|+ +|+++++++++.+.+ +++   +... ++  |.++. +..+..+++.+.. 
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-vi--~~~~~-~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADL-TL--NRRET-SVEERRKAIMDITH   97 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSE-EE--ETTTS-CHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceE-EE--ecccc-chHHHHHHHHHhhC
Confidence            36899999997 8999999999999998 699999999887544 333   3332 23  33321 1222233333332 


Q ss_pred             -CCccEEEECCCC
Q 040531           91 -GRLDILFNNAGV  102 (285)
Q Consensus        91 -~~id~lv~~ag~  102 (285)
                       ..+|++|.++|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence             259999999874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.58  E-value=0.00012  Score=55.97  Aligned_cols=77  Identities=17%  Similarity=0.171  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH--cC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK--HG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~--~~   91 (285)
                      +|.++||+||+|++|...+..+...|++|+++.+++++.+.+ .   +.+... +  .|..+.+-    .+++.+.  ..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~---~~Ga~~-v--i~~~~~~~----~~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-S---RLGVEY-V--GDSRSVDF----ADEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-H---TTCCSE-E--EETTCSTH----HHHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-c---cccccc-c--ccCCccCH----HHHHHHHhCCC
Confidence            589999999999999999999889999999999887764332 2   334442 2  24444332    2233333  23


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      .+|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999887

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.57  E-value=0.00024  Score=53.84  Aligned_cols=77  Identities=12%  Similarity=0.127  Sum_probs=59.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .++++|+++|.|+ ||.+++++..|.+.+.++.++.|+.++.+.+.+.+.. ..++..+..|-.              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~-~~~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP-YGNIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-GSCEEEEEGGGC--------------CC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh-ccccchhhhccc--------------cc
Confidence            4679999999987 6779999999999888999999999999999888753 234555544421              12


Q ss_pred             CCccEEEECCCCC
Q 040531           91 GRLDILFNNAGVL  103 (285)
Q Consensus        91 ~~id~lv~~ag~~  103 (285)
                      ...|++||+....
T Consensus        78 ~~~diiIN~tp~g   90 (171)
T d1p77a1          78 QTYDLVINATSAG   90 (171)
T ss_dssp             SCCSEEEECCCC-
T ss_pred             cccceeeeccccc
Confidence            4789999997654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=7e-05  Score=48.80  Aligned_cols=43  Identities=28%  Similarity=0.363  Sum_probs=37.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      -++.++||+||+||+|...+..+...|++|+.+.++++..+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999998889999999999888775443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.48  E-value=0.00019  Score=54.33  Aligned_cols=74  Identities=19%  Similarity=0.217  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|+++||+||+|++|...+......|++|+.+++++++.+.+. ++   +....   .|..+.      .+++ .....+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l---Ga~~~---i~~~~~------~~~~-~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL---GAEEA---ATYAEV------PERA-KAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT---TCSEE---EEGGGH------HHHH-HHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc---cccee---eehhhh------hhhh-hccccc
Confidence            7999999999999999999988899999999998887765443 33   33322   243321      1222 234579


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+++.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.44  E-value=0.0009  Score=50.29  Aligned_cols=45  Identities=29%  Similarity=0.340  Sum_probs=39.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHh
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSL   59 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~   59 (285)
                      ++|.++|.|+ ||.+++++..|.+.|. ++.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6889999988 7889999999999996 6999999999888877665

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00035  Score=55.29  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=58.0

Q ss_pred             cccCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccC
Q 040531           10 YKTLEGKIAIVTGG----------------ARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDV   73 (285)
Q Consensus        10 ~~~l~~k~vlItGa----------------s~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~   73 (285)
                      +.+|+|+.+|||+|                ||..|.++|+++..+|+.|.++......         .....+..+  .+
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~   69 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DV   69 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--EC
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--ee
Confidence            35899999999987                5789999999999999999998765432         112234444  34


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 040531           74 SLEQDIQNLINVTISKHGRLDILFNNAGVLGN  105 (285)
Q Consensus        74 s~~~~i~~~~~~i~~~~~~id~lv~~ag~~~~  105 (285)
                      ...++....+   .+.....|++|++|.+...
T Consensus        70 ~t~~~m~~~~---~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          70 MTALEMEAAV---NASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CSHHHHHHHH---HHHGGGCSEEEECCBCCSE
T ss_pred             hhhHHHHHHH---HhhhccceeEeeeechhhh
Confidence            4455555444   3444568999999988543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.39  E-value=7.8e-05  Score=54.05  Aligned_cols=73  Identities=19%  Similarity=0.233  Sum_probs=54.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |.++|.|+ |.+|+.+++.|.+.|+.|++++.+++..+++.+.    +  ..++.+|.++++.+.++-      ....|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~----~--~~~~~gd~~~~~~l~~a~------i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----A--THAVIANATEENELLSLG------IRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT----C--SEEEECCTTCTTHHHHHT------GGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh----C--CcceeeecccchhhhccC------CccccE
Confidence            45778876 7889999999999999999999998887665322    2  356678999988776641      125787


Q ss_pred             EEECCC
Q 040531           96 LFNNAG  101 (285)
Q Consensus        96 lv~~ag  101 (285)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            777543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.33  E-value=0.0021  Score=47.01  Aligned_cols=113  Identities=14%  Similarity=0.129  Sum_probs=65.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhc---CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLS---SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.+.|.|+ |.+|..+|..|+.+|  ..++++|++++..+.....+..   ..........|..              .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------H
Confidence            557888896 999999999999988  5799999998877655544432   1233344444531              1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                      ...-|++|..||....          +.++-.+.+..|+.-.-.+.+.+.+.   ...+.++++|-
T Consensus        70 ~~~adivvitag~~~~----------~g~~r~~l~~~N~~i~~~~~~~i~~~---~p~aivivvtN  122 (146)
T d1ez4a1          70 CKDADLVVITAGAPQK----------PGESRLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAAN  122 (146)
T ss_dssp             GTTCSEEEECCCC--------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             hccccEEEEecccccC----------CCCCHHHHHHHHHHHHHHHHHHHhhc---CCCcEEEEeCC
Confidence            2368999999986421          11222344556654444444444332   23455555543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.31  E-value=0.00037  Score=53.49  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=63.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEE-EecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++|||+||+||+|...++.....|+.+++ +++++++...+..++   +..   ...|..+++ ..+.++++.  ...+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad---~vi~~~~~~-~~~~~~~~~--~~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFD---AAVNYKTGN-VAEQLREAC--PGGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCS---EEEETTSSC-HHHHHHHHC--TTCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cce---EEeeccchh-HHHHHHHHh--ccCc
Confidence            489999999999999999888789987554 566666666565555   222   223444433 233333332  2369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccc
Q 040531           94 DILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASL  159 (285)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~  159 (285)
                      |+++.+.|.               +               .++..++.+  +..|+++.+++.++.
T Consensus       102 Dvv~D~vGg---------------~---------------~~~~~~~~l--~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         102 DVYFDNVGG---------------D---------------ISNTVISQM--NENSHIILCGQISQY  135 (187)
T ss_dssp             EEEEESSCH---------------H---------------HHHHHHTTE--EEEEEEEEC------
T ss_pred             eEEEecCCc---------------h---------------hHHHHhhhc--cccccEEEecccccc
Confidence            999998772               0               134445555  457999998876553

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.28  E-value=0.0038  Score=45.71  Aligned_cols=119  Identities=16%  Similarity=0.160  Sum_probs=72.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~   83 (285)
                      |.+-.++.+.|+|| |.+|.++|..++.+|.  +++++|++++.++.....+...    ...+.+...|..         
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~---------   70 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD---------   70 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG---------
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH---------
Confidence            34456778889997 9999999999999884  5999999988877666555421    223444444431         


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           84 NVTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        84 ~~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                           ....-|++|..+|.....       ..+.   .+.+..|+.=.-.+.+.+.++   ...+.+++++-.
T Consensus        71 -----~l~daDvvvitag~~~~~-------~~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~~ivvtNP  125 (148)
T d1ldna1          71 -----DCRDADLVVICAGANQKP-------GETR---LDLVDKNIAIFRSIVESVMAS---GFQGLFLVATNP  125 (148)
T ss_dssp             -----GTTTCSEEEECCSCCCCT-------TTCS---GGGHHHHHHHHHHHHHHHHHH---TCCSEEEECSSS
T ss_pred             -----HhccceeEEEeccccccc-------Ccch---hHHHHHHHHHHHHHHHHHHhh---CCCceEEEecCc
Confidence                 123589999999975321       1121   223444544333444444333   235667766553

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.22  E-value=0.0023  Score=46.72  Aligned_cols=116  Identities=16%  Similarity=0.185  Sum_probs=68.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+.|+||+|.+|.++|..|+.+|.  .++++|.++...+.  ..+.... .+.....-+. ..+..+.       ...-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~-~~~~~~~~~~-~~~~~~~-------~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIE-TRATVKGYLG-PEQLPDC-------LKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSS-SSCEEEEEES-GGGHHHH-------HTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhh-hhcCCCeEEc-CCChHHH-------hCCCC
Confidence            578999999999999999999884  49999988765433  2332111 1111111111 1222221       23689


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           95 ILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ++|..||....     +  ..+..   +.++.|+.-.-.+.+.+.++   ...+.++.+|..
T Consensus        71 ivVitag~~~~-----~--g~sR~---~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtNP  119 (144)
T d1mlda1          71 VVVIPAGVPRK-----P--GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNP  119 (144)
T ss_dssp             EEEECCSCCCC-----T--TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             EEEECCCcCCC-----C--CCCcc---hHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            99999997422     1  12322   34667776665566665544   235667766654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.16  E-value=0.00054  Score=51.52  Aligned_cols=80  Identities=15%  Similarity=0.251  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      ++.+++|+|++|++|..++..+...|. +|+++++++++.+.+. ++   +.. .++  |.++.+..++..+..  ..+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~---Ga~-~~i--~~~~~~~~~~~~~~~--~~~~   97 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GAD-YVI--NASMQDPLAEIRRIT--ESKG   97 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCS-EEE--ETTTSCHHHHHHHHT--TTSC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc---CCc-eee--ccCCcCHHHHHHHHh--hccc
Confidence            688999999999999999999988885 7888898887765544 33   333 223  334433333332211  1235


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|+++.++|.
T Consensus        98 ~d~vid~~g~  107 (170)
T d1jvba2          98 VDAVIDLNNS  107 (170)
T ss_dssp             EEEEEESCCC
T ss_pred             chhhhccccc
Confidence            9999999874

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.12  E-value=0.0095  Score=44.78  Aligned_cols=118  Identities=13%  Similarity=0.006  Sum_probs=64.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCchh--hHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDAA--GIALADSLLSSS-PLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      -..|.||||+|.||.+++..|++...       .+.+++.....  ++...-++.... .....+..- ++.        
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~--------   94 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP--------   94 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH--------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc--------
Confidence            44799999999999999999997532       45566654432  233332332221 222222211 221        


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                        .+.+...|++|..+|....       ...+.   .+.++.|+.=.-.+.+++.++-  ....+|+.++-
T Consensus        95 --~~~~~~aDvVvi~ag~~rk-------pg~tR---~Dll~~N~~I~k~~~~~i~~~a--~~~~~vlvv~N  151 (175)
T d7mdha1          95 --YEVFEDVDWALLIGAKPRG-------PGMER---AALLDINGQIFADQGKALNAVA--SKNVKVLVVGN  151 (175)
T ss_dssp             --HHHTTTCSEEEECCCCCCC-------TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSS
T ss_pred             --hhhccCCceEEEeeccCCC-------CCCcH---HHHHHHHHHHHHHHHHHHHhhC--CCCcEEEEecC
Confidence              1234579999999987532       12343   4456666554444444443332  22455655543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00025  Score=47.89  Aligned_cols=74  Identities=18%  Similarity=0.242  Sum_probs=50.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +++||+++|.|. |..|+++|+.|+++|++|.+.|.+.....  .+.+   .....+...+.. .+.    +       .
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~---~~~~~~~~~~~~-~~~----~-------~   63 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKL---PEAVERHTGSLN-DEW----L-------M   63 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGS---CTTSCEEESBCC-HHH----H-------H
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHH---hhccceeecccc-hhh----h-------c
Confidence            789999999998 55699999999999999999998655321  1122   122333333332 111    1       1


Q ss_pred             CccEEEECCCCC
Q 040531           92 RLDILFNNAGVL  103 (285)
Q Consensus        92 ~id~lv~~ag~~  103 (285)
                      .+|.+|...|+.
T Consensus        64 ~~d~vi~SPGi~   75 (93)
T d2jfga1          64 AADLIVASPGIA   75 (93)
T ss_dssp             HCSEEEECTTSC
T ss_pred             cCCEEEECCCCC
Confidence            479999999874

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.01  E-value=0.00081  Score=50.84  Aligned_cols=80  Identities=20%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|.+++|.|+ +|+|...+.++...|+ .|+++++++++.+...+ +   +....+...|-.  +.+.+..+..  ..+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~---Ga~~~i~~~~~~--~~~~~~~~~~--~~~G   98 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V---GATECVNPQDYK--KPIQEVLTEM--SNGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCSEEECGGGCS--SCHHHHHHHH--TTSC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h---CCeeEEecCCch--hHHHHHHHHH--hcCC
Confidence            6899999999 6899999999999985 78889998888665443 2   222222222221  2233333322  2347


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2jhfa2          99 VDFSFEVIGR  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEecCCc
Confidence            9999999885

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.99  E-value=0.0069  Score=44.54  Aligned_cols=117  Identities=13%  Similarity=0.082  Sum_probs=65.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC---------eEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA---------KVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~---------~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ..+.|+||+|.+|.+++..|++.+.         .++..+++.+.++.....+.... .....+...-.+.         
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   75 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK---------   75 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH---------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh---------
Confidence            3799999999999999999998753         12223445555555444443322 3333333332221         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                        +.+...|++|..+|....       ...+.++   .++.|+.-.-.+.+.+..+-  ...+.++.+|.
T Consensus        76 --~~~~~advViitaG~~~~-------pg~~r~d---l~~~N~~i~~~~~~~i~k~a--~~~~~vivvsN  131 (154)
T d1y7ta1          76 --VAFKDADYALLVGAAPRK-------AGMERRD---LLQVNGKIFTEQGRALAEVA--KKDVKVLVVGN  131 (154)
T ss_dssp             --HHTTTCSEEEECCCCCCC-------TTCCHHH---HHHHHHHHHHHHHHHHHHHS--CTTCEEEECSS
T ss_pred             --hhcccccEEEeecCcCCC-------CCCcHHH---HHHHHHHHHHHHHHHHHHhC--CCCcEEEEecC
Confidence              223479999999997532       2234443   35556554444444443321  22455655553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.0022  Score=47.16  Aligned_cols=75  Identities=13%  Similarity=0.063  Sum_probs=58.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDIL   96 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~l   96 (285)
                      +++|.|. +.+|+.++++|.++|..+++++.+++......+...  ...+.++.+|.++++.++++-      ....|.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~------i~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAG------IDRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh--cCCcEEEEccCcchHHHHHhc------cccCCEE
Confidence            5788887 689999999999999999999998887666665553  345788999999988776651      2357778


Q ss_pred             EECC
Q 040531           97 FNNA  100 (285)
Q Consensus        97 v~~a  100 (285)
                      |...
T Consensus        76 i~~~   79 (153)
T d1id1a_          76 LALS   79 (153)
T ss_dssp             EECS
T ss_pred             EEcc
Confidence            7754

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.97  E-value=0.011  Score=43.04  Aligned_cols=104  Identities=13%  Similarity=0.140  Sum_probs=62.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCch--hhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDA--AGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~--~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+.|+||+|.+|.++|..++.+|  ..++++++++.  .++.....+..    ....+.....--.+.           +
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~-----------~   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL-----------R   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH-----------H
Confidence            48999999999999999999998  47999998753  23333333321    122333221111111           1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHh
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKV  141 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (285)
                      ....-|++|.+||....       ...+..   +.++.|..=.-.+.+.+.++
T Consensus        71 ~l~~aDvVVitAG~~~~-------~g~sR~---dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          71 IIDESDVVIITSGVPRK-------EGMSRM---DLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             GGTTCSEEEECCSCCCC-------TTCCHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred             HhccceEEEEecccccC-------CCCChh---hhhhhhHHHHHHHHHHHhcc
Confidence            22468999999997422       122333   45667766555555555444

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.97  E-value=0.0017  Score=48.98  Aligned_cols=79  Identities=13%  Similarity=0.167  Sum_probs=51.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEE-EEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVV-IADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      -+|.+++|.|+ |+||...+..+...|+.++ ++++++++++.+ +++   +.. .++  |.++.+ ..+.+.++.  .+
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~-~~i--~~~~~~-~~~~i~~~t--~g   95 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT-HVI--NSKTQD-PVAAIKEIT--DG   95 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS-EEE--ETTTSC-HHHHHHHHT--TS
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCe-EEE--eCCCcC-HHHHHHHHc--CC
Confidence            36889999997 8999999988888898754 556666665544 344   222 233  444422 222233221  24


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.+.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999884

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.0017  Score=48.55  Aligned_cols=74  Identities=22%  Similarity=0.273  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      .|.+++|.|+ |+||...+..+...|++++++++++++.+ ...++   +... +  .|..+.+...       ...+.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad~-~--i~~~~~~~~~-------~~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GADE-V--VNSRNADEMA-------AHLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCSE-E--EETTCHHHHH-------TTTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCcE-E--EECchhhHHH-------HhcCCC
Confidence            6899999986 89999999888889999999999888754 44455   3332 2  3555554332       223479


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |+++.++|.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.86  E-value=0.003  Score=48.53  Aligned_cols=117  Identities=16%  Similarity=0.109  Sum_probs=68.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|.+|+|.|+ +++|...+......|+ .|+++++++++++.+.+ +   +... +  .|-.+. ++.+.+.++. ....
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~---Ga~~-~--~~~~~~-~~~~~i~~~t-~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q---GFEI-A--DLSLDT-PLHEQIAALL-GEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCEE-E--ETTSSS-CHHHHHHHHH-SSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c---cccE-E--EeCCCc-CHHHHHHHHh-CCCC
Confidence            6889999986 7999888887777787 58888888887654433 2   2222 2  233332 2222222222 2236


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      +|++|.+.|..........              .+..+.-..++..+..+  +..|+++.++-.
T Consensus        95 ~D~vid~vG~~~~~~~~~~--------------~~~~~~~~~l~~~~~~~--r~gG~v~~~G~~  142 (195)
T d1kola2          95 VDCAVDAVGFEARGHGHEG--------------AKHEAPATVLNSLMQVT--RVAGKIGIPGLY  142 (195)
T ss_dssp             EEEEEECCCTTCBCSSTTG--------------GGSBCTTHHHHHHHHHE--EEEEEEEECSCC
T ss_pred             cEEEEECccccccCCcccc--------------eeecCcHHHHHHHHHHH--hcCCEEEEeeec
Confidence            9999999885322111011              11222223455556666  456899888753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.84  E-value=0.0016  Score=49.12  Aligned_cols=79  Identities=11%  Similarity=0.020  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.. +++   +.. .+  +|..+.+..+.+ .++.. ...
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l---Ga~-~~--i~~~~~~~~~~v-~~~t~-g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY---GAT-DI--LNYKNGHIEDQV-MKLTN-GKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH---TCS-EE--ECGGGSCHHHHH-HHHTT-TSC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh---Ccc-cc--ccccchhHHHHH-HHHhh-ccC
Confidence            6889999986 8999999999888897 589999988885544 334   222 22  344442222222 22211 235


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus        97 ~D~vid~~g~  106 (174)
T d1jqba2          97 VDRVIMAGGG  106 (174)
T ss_dssp             EEEEEECSSC
T ss_pred             cceEEEccCC
Confidence            9999999885

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.84  E-value=0.00049  Score=51.83  Aligned_cols=100  Identities=18%  Similarity=0.232  Sum_probs=66.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH--HcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS--KHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~--~~~   91 (285)
                      ++.+|||+||+||+|...+......|++|+.+.+++++.+.+. ++   +.... +  |-   ++   ...+..+  ..+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~l---Gad~v-i--~~---~~---~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEV-I--SR---ED---VYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEE-E--EH---HH---HCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hh---cccce-E--ec---cc---hhchhhhcccCC
Confidence            4668999999999999999887788999999999888755543 33   33322 1  21   11   1111111  124


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccccc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVAS  158 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~  158 (285)
                      .+|+++.+.|..                              .+...+..+  +..|+++.++...+
T Consensus        90 gvd~vid~vgg~------------------------------~~~~~~~~l--~~~G~iv~~G~~~g  124 (167)
T d1tt7a2          90 QWQGAVDPVGGK------------------------------QLASLLSKI--QYGGSVAVSGLTGG  124 (167)
T ss_dssp             CEEEEEESCCTH------------------------------HHHHHHTTE--EEEEEEEECCCSSC
T ss_pred             CceEEEecCcHH------------------------------HHHHHHHHh--ccCceEEEeeccCC
Confidence            699999987731                              234455555  34799999887765

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.84  E-value=0.0014  Score=49.56  Aligned_cols=79  Identities=14%  Similarity=0.184  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHH-HHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD-IQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~i~~~~~   91 (285)
                      +|.+++|+|+ ||+|...+..+...|+ +|+.+++++++++...+ +   +....+   |.++.+. .+...+ . ...+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~---GA~~~i---n~~~~~~~~~~~~~-~-~~g~   98 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V---GATECI---SPKDSTKPISEVLS-E-MTGN   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H---TCSEEE---CGGGCSSCHHHHHH-H-HHTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c---CCcEEE---CccccchHHHHHHH-H-hccc
Confidence            5899999986 8999999999999995 69999999999765443 3   333222   2222221 122221 1 1234


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999998874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.0008  Score=51.13  Aligned_cols=45  Identities=31%  Similarity=0.414  Sum_probs=37.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      ++.++||+||+||+|...+......|++|+.++++++..+.+ +++
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~l   75 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSL   75 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhh
Confidence            345899999999999999998889999999999988885444 444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.016  Score=42.03  Aligned_cols=116  Identities=21%  Similarity=0.232  Sum_probs=66.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---CCeEEEEecCchhhHHHHHHhhcCCCce-EEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           17 IAIVTGGARGIGEATVRLFVKH---GAKVVIADIDDAAGIALADSLLSSSPLV-TYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+.|+|++|.+|.+++..|+.+   ...++++|..+. .+...-.+....... .....+-.+.+++           ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEEEcCCCcccc-----------CC
Confidence            5789999999999999988643   367999997653 333333443222111 1122233333222           25


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           93 LDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      -|++|..||....     +  ..+..   +.++.|..-.-.+.+.+.++   ..++.++++|...
T Consensus        70 aDvvvitaG~~~k-----~--g~~R~---dl~~~N~~i~~~v~~~i~~~---~p~aivivvtNPv  121 (145)
T d2cmda1          70 ADVVLISAGVRRK-----P--GMDRS---DLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPV  121 (145)
T ss_dssp             CSEEEECCSCCCC-----T--TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSSH
T ss_pred             CCEEEECCCccCC-----C--Ccchh---hHHHHHHHHHHHHHHHHHhh---CCCcEEEEccCCc
Confidence            7999999997532     1  12322   34666655555555555443   2356677666543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.80  E-value=0.0067  Score=44.97  Aligned_cols=42  Identities=29%  Similarity=0.356  Sum_probs=36.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      +|.+++|.|+ |++|...+..+...|++|+++++++++++...
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~   68 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR   68 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence            5889999886 99999999888899999999999988865443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.76  E-value=0.0064  Score=44.13  Aligned_cols=111  Identities=15%  Similarity=0.114  Sum_probs=63.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC---CCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS---SPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+.|+|+ |.+|.+++..++.++.  .++++|++++..+.....+...   .........|.              +...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--------------~~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY--------------SDVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG--------------GGGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH--------------HHhC
Confidence            3555687 9999999999999874  6999999988766666555432   12232222221              1234


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                      .-|++|..||....     +  ..+   -.+.++.|+.-...+.+.+.++   ...+.++++|.
T Consensus        68 ~adivvitag~~~~-----~--~~~---r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRK-----P--GET---RLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC-------------C---HHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             CCceEEEecccccC-----c--Ccc---hhHHhhHHHHHHHHHHHHhhcc---CCCceEEEecC
Confidence            68999999996421     1  112   3455667765555555554443   23566666654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.75  E-value=0.0033  Score=46.07  Aligned_cols=84  Identities=14%  Similarity=0.065  Sum_probs=56.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ++..-|++.|.||.|-+|..+++.|.+.|++|.+.+|+.....+...    ....+..+..++   .++...+.++....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~~~---~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSVPI---NLTLETIERLKPYL   77 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECSCG---GGHHHHHHHHGGGC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhccccccccch---hhheeeeecccccc
Confidence            34455789999999999999999999999999999998876554332    133444444444   45555666665544


Q ss_pred             CCccEEEECCC
Q 040531           91 GRLDILFNNAG  101 (285)
Q Consensus        91 ~~id~lv~~ag  101 (285)
                      .+=.+++..++
T Consensus        78 ~~~~iiiD~~S   88 (152)
T d2pv7a2          78 TENMLLADLTS   88 (152)
T ss_dssp             CTTSEEEECCS
T ss_pred             cCCceEEEecc
Confidence            33345555443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.74  E-value=0.013  Score=42.65  Aligned_cols=73  Identities=15%  Similarity=0.147  Sum_probs=51.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+.|+|+ |.+|.+++..|+.+|  ..++++|++++.++.....+..    ..........|.   ++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            67778895 899999999999888  4699999998887665555532    122333333343   11           


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                      ...-|++|..||..
T Consensus        67 l~~adiVVitaG~~   80 (146)
T d1hyha1          67 LADADVVISTLGNI   80 (146)
T ss_dssp             GTTCSEEEECCSCG
T ss_pred             hccccEEEEecccc
Confidence            23689999999975

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.67  E-value=0.01  Score=43.88  Aligned_cols=81  Identities=16%  Similarity=0.091  Sum_probs=56.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh--------c--CCCceEEEeccCCCHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL--------S--SSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~--------~--~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      .+.|.|+ |-+|.++|+.|.+.|++|++.+|+++..++..+.-.        +  ...++.++...   .+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp---~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTP---IQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSC---HHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCc---Hhhhhhhhhhh
Confidence            4667765 999999999999999999999999888776554321        0  12344444333   56788888888


Q ss_pred             HHHcCCccEEEECCC
Q 040531           87 ISKHGRLDILFNNAG  101 (285)
Q Consensus        87 ~~~~~~id~lv~~ag  101 (285)
                      .....+=.++++.++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766555555655543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.62  E-value=0.0069  Score=45.50  Aligned_cols=85  Identities=13%  Similarity=0.036  Sum_probs=60.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC---------------CCceEEEeccCCCHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS---------------SPLVTYLHCDVSLEQDIQ   80 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~---------------~~~v~~~~~D~s~~~~i~   80 (285)
                      +++-|.|- |-+|.++|+.|++.|++|++.+|++++.+++.+.-...               -.+...+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45667766 88999999999999999999999999988776542110               112234444566668888


Q ss_pred             HHHHHHHHHcCCccEEEECCC
Q 040531           81 NLINVTISKHGRLDILFNNAG  101 (285)
Q Consensus        81 ~~~~~i~~~~~~id~lv~~ag  101 (285)
                      ...+.+.....+=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888887776655667777543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.61  E-value=0.035  Score=39.93  Aligned_cols=112  Identities=15%  Similarity=0.121  Sum_probs=67.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+.|+|| |.+|.+++..++..|  .+++++|.+++.++.....+...    ..+..+...+  +.++           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4678896 999999999999998  57999999988776555444321    2233333221  1111           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                      ..-|++|..+|.....       ..+.   .+.++.|+.=...+.+.+.+.   ...+.++++|-
T Consensus        68 ~dadvvvitag~~~~~-------g~~r---~~l~~~N~~i~~~i~~~i~~~---~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKP-------GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCT-------TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCC-------CCch---HHHHHHHHHHHHHHHHHhhcc---CCCeEEEEecC
Confidence            4689999999974321       1222   344555655444455554443   23455665544

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.60  E-value=0.025  Score=40.82  Aligned_cols=111  Identities=16%  Similarity=0.100  Sum_probs=65.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCc--hhhHHHHHHhhc---CCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDD--AAGIALADSLLS---SSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~--~~~~~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.|+||+|.+|.++|..++.++.  .++++|.+.  +..+.....+..   ..........|..   +           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~---~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE---D-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG---G-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH---H-----------
Confidence            578999999999999999999984  589988643  333322333321   2233444444432   1           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTAS  155 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss  155 (285)
                      ...-|++|..||....     +  ..+   -.+.++.|..=    ++.+.+.+.+.. .+.++.++.
T Consensus        68 ~~~aDiVvitaG~~~~-----~--g~~---R~dl~~~N~~I----~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ-----P--GQT---RIDLAGDNAPI----MEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCC-----T--TCC---HHHHHHHHHHH----HHHHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEecccccc-----c--CCc---hhhHHHHHHHH----HHHHHHHHHhcCCCceEEEecC
Confidence            2368999999996422     1  123   33456666543    444555554443 456665544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.58  E-value=0.0082  Score=45.02  Aligned_cols=80  Identities=19%  Similarity=0.171  Sum_probs=52.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHH-HHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ-DIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~-~i~~~~~~i~~~~   90 (285)
                      -+|.+++|.|+ ||+|...+..+...|+ +|+++++++++++... ++   +.. .++  |.++.+ .+.+....  ...
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l---Ga~-~~i--~~~~~d~~~~~~~~~--~~~   95 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GAT-ECL--NPKDYDKPIYEVICE--KTN   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCS-EEE--CGGGCSSCHHHHHHH--HTT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc---CCc-EEE--cCCCchhHHHHHHHH--hcC
Confidence            36899999986 8999999999999996 5888899988876554 33   222 222  322222 12222221  123


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      +.+|++|.++|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            579999998874

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.56  E-value=0.023  Score=41.87  Aligned_cols=117  Identities=17%  Similarity=0.140  Sum_probs=72.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      .++.+.+.|.|+ |.+|.+++..++.+|.  .++++|++++..+.....+...    +........|..+          
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~----------   85 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV----------   85 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG----------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh----------
Confidence            456778888896 9999999999999984  5999999988876666555321    2223333333322          


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcC-CCCceEEEEcccc
Q 040531           86 TISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVP-RRSGCIISTASVA  157 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~ii~vss~~  157 (285)
                          ...-|++|..||....     +  ..+..   +.++.|+.    +++.+.+.+.+ ...+.++++|...
T Consensus        86 ----~~~adiVVitAg~~~~-----~--g~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtNPv  140 (160)
T d1i0za1          86 ----TANSKIVVVTAGVRQQ-----E--GESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSNPV  140 (160)
T ss_dssp             ----GTTCSEEEECCSCCCC-----T--TCCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             ----cccccEEEEecCCccc-----c--CcchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCCch
Confidence                2368999999997532     1  12222   33445554    34444444443 2356677666543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.56  E-value=0.023  Score=41.65  Aligned_cols=123  Identities=17%  Similarity=0.081  Sum_probs=70.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      -+.+.+.|.|+ |.+|..+|..++..+ ++++++|.+++.++.....+..    ........ .+ ++.++   .     
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~~~---~-----   73 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSYEA---A-----   73 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSHHH---H-----
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cchhh---h-----
Confidence            35677888897 999999999999888 5799999998776666555432    11121111 11 11111   1     


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           88 SKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                        ...-|++|..+|......  .+-.+.+..   +.+..|+.-...+.+.+.++   ...+.++++|..
T Consensus        74 --~~~adiVvitag~~~~~g--~~~~~~tR~---~l~~~n~~iv~~i~~~i~~~---~p~aiviivsNP  132 (154)
T d1pzga1          74 --LTGADCVIVTAGLTKVPG--KPDSEWSRN---DLLPFNSKIIREIGQNIKKY---CPKTFIIVVTNP  132 (154)
T ss_dssp             --HTTCSEEEECCSCSSCTT--CCGGGCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             --hcCCCeEEEecccccCCC--CCCcccchh---hhhhhhHHHHHHHHHHHHhc---CCCcEEEEeCCc
Confidence              136899999998753211  111112322   23555555544445544433   235666666553

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.55  E-value=0.0037  Score=47.12  Aligned_cols=80  Identities=20%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|.+|+|.|+ |+||...+..+...|+. |+++++++++++.. +++   +.. .++...-.+ +......+..  ..+.
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~---Ga~-~~i~~~~~~-~~~~~~~~~~--~~~G   98 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GAT-DCLNPRELD-KPVQDVITEL--TAGG   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCS-EEECGGGCS-SCHHHHHHHH--HTSC
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh---CCC-cccCCccch-hhhhhhHhhh--hcCC
Confidence            6889999975 99999999999999985 77788888875443 333   222 223221111 2222322222  2357


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus        99 ~d~vie~~G~  108 (174)
T d1e3ia2          99 VDYSLDCAGT  108 (174)
T ss_dssp             BSEEEESSCC
T ss_pred             CcEEEEeccc
Confidence            9999999884

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.53  E-value=0.0027  Score=44.21  Aligned_cols=41  Identities=20%  Similarity=0.481  Sum_probs=35.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      ..+++||++||+|++. +|..-++.|++.|++|++++.....
T Consensus         7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~   47 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIP   47 (113)
T ss_dssp             EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred             EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCCh
Confidence            4589999999999865 8999999999999999998865543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.53  E-value=0.00095  Score=51.72  Aligned_cols=46  Identities=24%  Similarity=0.398  Sum_probs=39.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      ..+|+||+++|.| .|.+|+.+|+.|.+.|++|++++.+........
T Consensus        22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          22 LGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            3479999999997 777999999999999999999998877765443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.012  Score=43.49  Aligned_cols=82  Identities=17%  Similarity=0.085  Sum_probs=56.4

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQN   81 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~   81 (285)
                      .+...++...+.|+|+ |.+|..+|..|+.+|.  .++++|++++.++.....+...    +........|..       
T Consensus        12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~-------   83 (159)
T d2ldxa1          12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN-------   83 (159)
T ss_dssp             SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-------
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh-------
Confidence            3344566667888896 9999999999999984  6999999988777666666431    122223333432       


Q ss_pred             HHHHHHHHcCCccEEEECCCCCC
Q 040531           82 LINVTISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        82 ~~~~i~~~~~~id~lv~~ag~~~  104 (285)
                             ....-|++|..||...
T Consensus        84 -------~~~~adivvitag~~~   99 (159)
T d2ldxa1          84 -------VSANSKLVIITAGARM   99 (159)
T ss_dssp             -------GGTTEEEEEECCSCCC
T ss_pred             -------hhccccEEEEeccccc
Confidence                   1246899999998753

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.50  E-value=0.024  Score=40.91  Aligned_cols=111  Identities=15%  Similarity=0.167  Sum_probs=64.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcC----CCceEEE-eccCCCHHHHHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSS----SPLVTYL-HCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~-~~D~s~~~~i~~~~~~i~~~   89 (285)
                      |.+.|+|+ |.+|.++|..|+.++ +.++++|.+++..+.....+...    .....+. .-|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            45667786 999999999999888 47999999887766555544321    1122222 223211              


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CceEEEEcc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRR-SGCIISTAS  155 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~ii~vss  155 (285)
                      ...-|++|.+||....          +.+.-.+.++.|+    .+++.+.+.+.+.. .+.++.+|-
T Consensus        67 ~~~advvvitag~~~~----------~~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          67 TANSDVIVVTSGAPRK----------PGMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             GTTCSEEEECCSCC-------------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             hcCCCEEEEeeeccCC----------cCcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence            2368999999997532          1111233455554    35566666665533 555555444

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0023  Score=49.10  Aligned_cols=43  Identities=21%  Similarity=0.282  Sum_probs=38.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      |.+.|.|| |-+|+.+|..|+..|+.|++.+++++.+++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            68899998 77999999999999999999999998877766655

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.41  E-value=0.004  Score=46.65  Aligned_cols=80  Identities=21%  Similarity=0.265  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|.+++|.|+ +|+|...+..+...|+. |+.+++++++.+ ..+++   +... ++..+- +.+.+.+.+++.  ..+.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~-~i~~~~-~~~~~~~~~~~~--~~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATE-CINPQD-FSKPIQEVLIEM--TDGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSE-EECGGG-CSSCHHHHHHHH--TTSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcE-EEeCCc-hhhHHHHHHHHH--cCCC
Confidence            6889999998 58999999999999965 666667666654 44455   2222 222211 112233333322  2347


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            9999999874

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.38  E-value=0.0024  Score=48.25  Aligned_cols=48  Identities=21%  Similarity=0.279  Sum_probs=41.5

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL   60 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~   60 (285)
                      .+++||.|||.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+.
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~   61 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIA   61 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHH
Confidence            4689999999987 578999999998777 89999999999988887664

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.37  E-value=0.0027  Score=47.45  Aligned_cols=76  Identities=14%  Similarity=0.064  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.+++|.|+ |++|...+..+...|++|+++++++++++.. .++   +....+..-+-.+   .      ..+..+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l---Ga~~~i~~~~~~~---~------~~~~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM---GADHYIATLEEGD---W------GEKYFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH---TCSEEEEGGGTSC---H------HHHSCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc---CCcEEeeccchHH---H------HHhhhccc
Confidence            6899999987 8999998887778899999999998887654 334   3332222222211   1      11223578


Q ss_pred             cEEEECCCCC
Q 040531           94 DILFNNAGVL  103 (285)
Q Consensus        94 d~lv~~ag~~  103 (285)
                      |+++.+.+..
T Consensus        93 d~vi~~~~~~  102 (168)
T d1piwa2          93 DLIVVCASSL  102 (168)
T ss_dssp             EEEEECCSCS
T ss_pred             ceEEEEecCC
Confidence            9999987753

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.30  E-value=0.011  Score=44.06  Aligned_cols=78  Identities=15%  Similarity=0.290  Sum_probs=50.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .|.+++|.|+ |++|...+..+...|+ .|+++++++++++.+.+ +   +.. .++  |.++ +.++...+..  ....
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~---ga~-~~i--~~~~-~~~~~~~~~~--~~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L---GAD-HVV--DARR-DPVKQVMELT--RGRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T---TCS-EEE--ETTS-CHHHHHHHHT--TTCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c---ccc-eee--cCcc-cHHHHHHHhh--CCCC
Confidence            5889999986 9999999988888886 56777888777654443 2   222 223  3332 3333333211  1235


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      +|++|.++|.
T Consensus       101 ~d~vid~~g~  110 (172)
T d1h2ba2         101 VNVAMDFVGS  110 (172)
T ss_dssp             EEEEEESSCC
T ss_pred             ceEEEEecCc
Confidence            9999999884

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.25  E-value=0.01  Score=43.84  Aligned_cols=42  Identities=26%  Similarity=0.310  Sum_probs=35.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      +|.++||.|+ |+||...+..+...|++|+++++++++++...
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k   68 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK   68 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence            6889999875 89999998888899999999999988866443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.19  E-value=0.0045  Score=46.53  Aligned_cols=43  Identities=26%  Similarity=0.208  Sum_probs=37.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADS   58 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~   58 (285)
                      .|++.|.|+ |.+|.++|..|++.|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999998 8889999999999999999999998887766543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.15  E-value=0.068  Score=38.24  Aligned_cols=110  Identities=19%  Similarity=0.179  Sum_probs=66.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCchhhHHHHHHhhc---CCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG--AKVVIADIDDAAGIALADSLLS---SSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g--~~v~~~~r~~~~~~~~~~~~~~---~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .+.|.|+ |.+|.+++..++.++  ..++++|++++.++.....+..   ...+......|.   ++           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            4677796 899999999999887  4699999998887766555432   122334333333   11           23


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcc
Q 040531           92 RLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTAS  155 (285)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss  155 (285)
                      .-|++|..||....       ...+.   .+.+..|+.    +++.+.+.+.+. ..+.++++|.
T Consensus        67 ~adivvitag~~~~-------~g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQK-------PGETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCC-------SSCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccC-------CCcch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeCC
Confidence            68999999997532       12233   234455543    344444444433 3455665543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.039  Score=42.20  Aligned_cols=77  Identities=25%  Similarity=0.262  Sum_probs=58.8

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .-+++|++||=.|+++|.   ++..++..|+ .|+.++.++..+..+.+.+...+.+..++.+|+.+.            
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            346899999988877662   2333456775 799999999998888888877777888899897432            


Q ss_pred             HcCCccEEEECCCC
Q 040531           89 KHGRLDILFNNAGV  102 (285)
Q Consensus        89 ~~~~id~lv~~ag~  102 (285)
                       .+++|+||.|.-+
T Consensus       107 -~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -NSRVDIVIMNPPF  119 (201)
T ss_dssp             -CCCCSEEEECCCC
T ss_pred             -CCcCcEEEEcCcc
Confidence             3589999999765

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.09  E-value=0.1  Score=37.38  Aligned_cols=111  Identities=16%  Similarity=0.104  Sum_probs=65.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhcC---CCceEEEe-ccCCCHHHHHHHHHHHHHHc
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLSS---SPLVTYLH-CDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~v~~~~-~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+.|+|+ |.+|.++|..++.+|.  +++++|++++..+.....+...   ........ .|.   ++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~---~~-----------~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP---EI-----------C   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG---GG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH---HH-----------h
Confidence            4566686 9999999999999984  5999999988776554444321   12222222 222   11           1


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                      ..-|++|..||....       ...+..   +.+..|+.=.-.+.+.+.+.   ...+.++.+|.
T Consensus        68 ~daDvVVitaG~~~~-------~g~~R~---dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPRQK-------PGQSRL---ELVGATVNILKAIMPNLVKV---APNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCCCC-------TTCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred             hCCcEEEEecccccC-------CCCchh---hhhhhhHHHHHHHHHHHHhh---CCCeEEEEeCC
Confidence            357999999997422       123333   45666664444444444332   23456666554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.02  E-value=0.044  Score=40.93  Aligned_cols=76  Identities=16%  Similarity=0.139  Sum_probs=56.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-------------CCceEEEeccCCCHHHH
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-------------SPLVTYLHCDVSLEQDI   79 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~D~s~~~~i   79 (285)
                      -+|+.||..|++.|   ..+..|+++|++|+.+|.++..+..+.+...+.             .....++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            47899999999887   377799999999999999999988887766432             23456788888764332


Q ss_pred             HHHHHHHHHHcCCccEEEECC
Q 040531           80 QNLINVTISKHGRLDILFNNA  100 (285)
Q Consensus        80 ~~~~~~i~~~~~~id~lv~~a  100 (285)
                      ..         ...|.++...
T Consensus        96 ~~---------~~~D~i~~~~  107 (201)
T d1pjza_          96 DI---------GHCAAFYDRA  107 (201)
T ss_dssp             HH---------HSEEEEEEES
T ss_pred             cc---------cceeEEEEEe
Confidence            11         2578777643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.97  E-value=0.0034  Score=47.81  Aligned_cols=43  Identities=19%  Similarity=0.173  Sum_probs=37.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      |++.|.|| |-+|+.+|..|+..|++|++.+++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            45888888 77999999999999999999999998877766654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.97  E-value=0.062  Score=38.99  Aligned_cols=119  Identities=16%  Similarity=0.121  Sum_probs=67.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHhhcC----CCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSLLSS----SPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+.|.|+ |.+|.+++..++..+ .+++++|++++..+.....+...    ..+..+...+-  .           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------ccc
Confidence            45777785 999999999888887 46999999887776665555321    22333332221  1           122


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ..-|++|..+|......  ..-.+.+..   +.+..|..-.-.+.+.+.+.   ...+.++++|..
T Consensus        70 ~~advvvitag~~~~~g--~~~~~~~R~---~l~~~N~~iv~~i~~~i~~~---~p~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPG--KSDKEWNRD---DLLPLNNKIMIEIGGHIKKN---CPNAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTT--CCSTTCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSS
T ss_pred             CCCcEEEEecccccCCC--CCccccchh---HHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            46899999999753211  111112222   33555654444444444333   234556665543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0064  Score=45.43  Aligned_cols=45  Identities=20%  Similarity=0.229  Sum_probs=40.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .+++||+++|.|-|.=+|+.++..|+++|++|.+++.+...+.+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~   79 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE   79 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence            468999999999999999999999999999999999877665443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.0076  Score=44.74  Aligned_cols=45  Identities=13%  Similarity=0.048  Sum_probs=39.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      .+++||+++|.|-|.-+|+.++..|.++|++|.++..+...+...
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            368999999999999999999999999999999988766554433

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.75  E-value=0.024  Score=44.58  Aligned_cols=74  Identities=14%  Similarity=0.056  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +++++|=.|+++|   .++..|+++|++|+.++.++..+..+.+.+.+.+.++.+++.|+.+..           -.+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----------~~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----------FKNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----------CCSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-----------ccccc
Confidence            5678999998887   456678899999999999998888777777766778999999986532           11468


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |.+++.-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98888533

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.72  E-value=0.036  Score=42.49  Aligned_cols=75  Identities=15%  Similarity=0.026  Sum_probs=57.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ++.+||=.|+++|.   ++..|++.|++|+.+|.+...++.+.+.....+.++..+..|..+..          -..+..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------ccCcCc
Confidence            35578999998875   66788899999999999988888777776666677888888886522          112479


Q ss_pred             cEEEECCC
Q 040531           94 DILFNNAG  101 (285)
Q Consensus        94 d~lv~~ag  101 (285)
                      |+|++...
T Consensus       104 D~I~~~~~  111 (226)
T d1ve3a1         104 DYVIFIDS  111 (226)
T ss_dssp             EEEEEESC
T ss_pred             eEEEEecc
Confidence            99988754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.68  E-value=0.032  Score=40.96  Aligned_cols=82  Identities=12%  Similarity=0.118  Sum_probs=54.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-------CCceEEEeccCCCHHHHHHHH---HHHH
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-------SPLVTYLHCDVSLEQDIQNLI---NVTI   87 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~---~~i~   87 (285)
                      +-|.| -|-+|.++|+.|++.|++|++.+|+++..+++.+.-...       ..+..++..-+.+.+.++.++   +.+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            55555 488999999999999999999999998877765532110       012334445567778887776   3344


Q ss_pred             HHcCCccEEEECC
Q 040531           88 SKHGRLDILFNNA  100 (285)
Q Consensus        88 ~~~~~id~lv~~a  100 (285)
                      ....+-+++|...
T Consensus        82 ~~~~~g~iiid~s   94 (161)
T d1vpda2          82 EGAKPGTVLIDMS   94 (161)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hccCCCCEEEECC
Confidence            4444445666653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.66  E-value=0.0072  Score=42.88  Aligned_cols=69  Identities=13%  Similarity=0.190  Sum_probs=50.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |+++|.|. +.+|+.+++.|  +|..+++++.+++..+....      ..+.++.+|.++++.++++      .....+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~------~~~~~i~Gd~~~~~~L~~a------~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR------SGANFVHGDPTRVSDLEKA------NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH------TTCEEEESCTTSHHHHHHT------TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh------cCccccccccCCHHHHHHh------hhhcCcE
Confidence            56888875 67899999998  46678888888887655432      2478889999998887664      1235677


Q ss_pred             EEEC
Q 040531           96 LFNN   99 (285)
Q Consensus        96 lv~~   99 (285)
                      +|..
T Consensus        66 vi~~   69 (129)
T d2fy8a1          66 VIVN   69 (129)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            7764

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.65  E-value=0.051  Score=39.60  Aligned_cols=78  Identities=19%  Similarity=0.134  Sum_probs=45.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCchhh--HHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGA-------KVVIADIDDAAG--IALADSLLSS-SPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~-------~v~~~~r~~~~~--~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ..+.|+||+|.+|.+++..|++.+.       .+++.+.++...  +.+..++... ......+..-- +.         
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~---------   73 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATD-KE---------   73 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEES-CH---------
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCc-cc---------
Confidence            3789999999999999999987652       366666554332  2222222221 22222222211 11         


Q ss_pred             HHHHcCCccEEEECCCCCC
Q 040531           86 TISKHGRLDILFNNAGVLG  104 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~~  104 (285)
                       .+.....|++|..+|...
T Consensus        74 -~~~~~~~dvVVitag~~~   91 (154)
T d5mdha1          74 -EIAFKDLDVAILVGSMPR   91 (154)
T ss_dssp             -HHHTTTCSEEEECCSCCC
T ss_pred             -ccccCCceEEEEecccCC
Confidence             112347999999999753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.48  E-value=0.018  Score=42.86  Aligned_cols=79  Identities=16%  Similarity=0.249  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHH-HHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQD-IQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~-i~~~~~~i~~~~~   91 (285)
                      +|.+++|.|+ +|+|...+..++..|. .|+.+++++++++...+ +   +.. .++  |.++.+. ..+..+.  ...+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~---GAd-~~i--n~~~~~~~~~~~~~~--~~~~   97 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F---GAT-DFV--NPNDHSEPISQVLSK--MTNG   97 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCC-EEE--CGGGCSSCHHHHHHH--HHTS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c---CCc-EEE--cCCCcchhHHHHHHh--hccC
Confidence            6889999986 6678888888888876 58888888888655443 3   322 233  3222211 2222221  1234


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      .+|+++.+.|.
T Consensus        98 G~d~vid~~G~  108 (175)
T d1cdoa2          98 GVDFSLECVGN  108 (175)
T ss_dssp             CBSEEEECSCC
T ss_pred             CcceeeeecCC
Confidence            79999999884

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.47  E-value=0.0087  Score=42.54  Aligned_cols=73  Identities=16%  Similarity=0.343  Sum_probs=54.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEE-EecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVI-ADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      .+.|.|++|..|+.+++.+.+.|+.++. ++++....      +  ...+   +..|+|.++...+.++...+.  ++-+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            5899999999999999999999988664 34433211      1  1223   456999999999999877666  4667


Q ss_pred             EEECCCC
Q 040531           96 LFNNAGV  102 (285)
Q Consensus        96 lv~~ag~  102 (285)
                      |+-..|+
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            7777775

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.44  E-value=0.099  Score=38.33  Aligned_cols=82  Identities=13%  Similarity=0.077  Sum_probs=54.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhc------------CCCceEEEeccCCCHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLS------------SSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~------------~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      +++|.|. |-+|.++|+.|.+.|.  +|+..+++.+..+.+.+.-.-            ....+.++..   -.+.+..+
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~---p~~~~~~v   78 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS---PVRTFREI   78 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS---CHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccC---Cchhhhhh
Confidence            5888875 8999999999999995  688899998887766553210            0122333322   24677788


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 040531           83 INVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~  102 (285)
                      ++++......=.+++..++.
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88877666544556665543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.34  E-value=0.0066  Score=44.35  Aligned_cols=37  Identities=22%  Similarity=0.423  Sum_probs=32.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADID   48 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~   48 (285)
                      ..++||++||+|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3589999999999 559999999999999999998754

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.32  E-value=0.11  Score=42.58  Aligned_cols=119  Identities=15%  Similarity=0.073  Sum_probs=74.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+|++||=.++..| |.++  +++..+.+|+.++.++..++.+.+.+...+ .++.++..|..+      +.+......
T Consensus       143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh
Confidence            468999996665554 3333  345567789999999999998888876655 358888888733      223334445


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcc
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTAS  155 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss  155 (285)
                      +..|.||.+...+...       .........       ....+++.+.+.++  .+|.++..+.
T Consensus       214 ~~fD~Vi~DpP~~~~~-------~~~~~~~~~-------~~~~l~~~a~~lLk--pGG~Lv~~sc  262 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKG-------KKDVERAYR-------AYKEVNLRAIKLLK--EGGILATASC  262 (318)
T ss_dssp             CCEEEEEECCCCSCCS-------TTSHHHHHH-------HHHHHHHHHHHTEE--EEEEEEEEEC
T ss_pred             cCCCEEEEcCCccccc-------hHHHHHHHH-------HHHHHHHHHHHHcC--CCCEEEEEeC
Confidence            6899999997654321       111111111       22345666777763  4576665544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.23  E-value=0.043  Score=40.53  Aligned_cols=79  Identities=23%  Similarity=0.262  Sum_probs=58.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+.-+++|.||+ -.|+..++.....|++|.++|.+.++++++.....   ..+..   -.++.+.+.+.+.       .
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~---~~~~~---~~~~~~~l~~~~~-------~   95 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG---SRVEL---LYSNSAEIETAVA-------E   95 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGSEE---EECCHHHHHHHHH-------T
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc---cccee---ehhhhhhHHHhhc-------c
Confidence            467788999875 45899999999999999999999999887766553   22332   2456666665554       6


Q ss_pred             ccEEEECCCCCCC
Q 040531           93 LDILFNNAGVLGN  105 (285)
Q Consensus        93 id~lv~~ag~~~~  105 (285)
                      -|+||..+-+...
T Consensus        96 aDivI~aalipG~  108 (168)
T d1pjca1          96 ADLLIGAVLVPGR  108 (168)
T ss_dssp             CSEEEECCCCTTS
T ss_pred             CcEEEEeeecCCc
Confidence            8999999876544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.018  Score=42.45  Aligned_cols=44  Identities=27%  Similarity=0.505  Sum_probs=37.8

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      .+...|.||+++|.|-+ .||+.+|+.+...|++|++++.++.+.
T Consensus        17 ~t~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          17 ATDVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             HHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             HhCceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccchh
Confidence            34456899999999865 899999999999999999999987553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.09  E-value=0.037  Score=41.72  Aligned_cols=65  Identities=20%  Similarity=0.091  Sum_probs=45.6

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhc-------CCCceEEEeccCCC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLS-------SSPLVTYLHCDVSL   75 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~v~~~~~D~s~   75 (285)
                      ...+.+|++.|.| .|.||+++++.+...|.+|+..++..............       ...++.++.+.+++
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~  110 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTP  110 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCST
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCc
Confidence            3468999999998 58899999999999999999999875543322211100       02456667777665

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.04  E-value=0.011  Score=46.37  Aligned_cols=49  Identities=29%  Similarity=0.371  Sum_probs=41.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      ..+++||+++|-| .|.+|..+|+.|.+.|++|+.++.+.........+.
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            3469999999997 467899999999999999999999888877666544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.01  E-value=0.016  Score=43.17  Aligned_cols=40  Identities=28%  Similarity=0.420  Sum_probs=36.4

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+++||+++|.|-|.=+|+.++..|+++|++|..++.+..
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~   64 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI   64 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccc
Confidence            4899999999999999999999999999999998876543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.00  E-value=0.082  Score=36.20  Aligned_cols=71  Identities=8%  Similarity=0.117  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ...++.|.| +|-+|+-++....+.|+++++.+.++......   +     .-.++..|+.|.+.+.++...-     .+
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---v-----a~~~i~~~~~d~~~l~~~~~~~-----~~   75 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---V-----AHRSHVINMLDGDALRRVVELE-----KP   75 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---G-----SSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---c-----CCeEEECCCCCHHHHHHHHHhh-----CC
Confidence            345789998 67899999999999999999999876643211   1     1256789999999988876532     58


Q ss_pred             cEEEE
Q 040531           94 DILFN   98 (285)
Q Consensus        94 d~lv~   98 (285)
                      |++-.
T Consensus        76 DviT~   80 (111)
T d1kjqa2          76 HYIVP   80 (111)
T ss_dssp             SEEEE
T ss_pred             ceEEE
Confidence            87765

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.88  E-value=0.4  Score=34.06  Aligned_cols=110  Identities=15%  Similarity=0.138  Sum_probs=64.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCchhhHHHHHHhhc----CCCceEEEe-ccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA--KVVIADIDDAAGIALADSLLS----SSPLVTYLH-CDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~~-~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.|.|+ |.+|.++|..++.+|.  .++++|++++..+.....+..    ......... -|.   +           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~-----------~   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-----------L   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H-----------H
Confidence            4677886 9999999999998883  499999998887655544432    112222222 232   1           1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCC-CCceEEEEcc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPR-RSGCIISTAS  155 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~ii~vss  155 (285)
                      ...-|++|..||....       ...+.   .+.+..|..=    ++...+.+.+. ..+.++.+|.
T Consensus        67 ~~~adiVvitag~~~~-------~g~~r---~~l~~~n~~i----~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLARK-------PGMTR---LDLAHKNAGI----IKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCCCC-------SSCCH---HHHHHHHHHH----HHHHHHHHHTTSTTCEEEECSS
T ss_pred             hccccEEEEeccccCC-------CCCch---HHHHHHhhHH----HHHHHHHHHhhCCCcEEEEecC
Confidence            2468999999986422       11232   3345555443    44444444443 3455555554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.014  Score=42.90  Aligned_cols=36  Identities=17%  Similarity=0.016  Sum_probs=32.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      +.++|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            35889988 9999999999999999999999987643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.82  E-value=0.039  Score=41.96  Aligned_cols=65  Identities=20%  Similarity=0.208  Sum_probs=45.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhh------c--CCCceEEEeccCCC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLL------S--SSPLVTYLHCDVSL   75 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~------~--~~~~v~~~~~D~s~   75 (285)
                      ...++||++.|.| -|.||+.+++.+...|++|+..++.............      +  ...++.++.+.+++
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~  116 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNE  116 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCT
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeecccc
Confidence            3568999999996 4789999999999999999999986543222111110      0  12356777777765

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.78  E-value=0.19  Score=41.12  Aligned_cols=117  Identities=10%  Similarity=0.052  Sum_probs=72.4

Q ss_pred             CCcEEEEecCCC-chhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGAR-GIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItGas~-gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +|++||=.++.. +++.+    ++..|+ +|+.++.+++.++...+.+...+  .++.++..|+.      +........
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            488888777654 44433    445675 69999999999888888776554  35788888873      223333444


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           90 HGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      ..++|+||.+.-....          ...+....    ......+++.+++.++  ++|.+++.+..
T Consensus       215 ~~~fD~Vi~DpP~~~~----------~~~~~~~~----~~~y~~l~~~a~~ll~--pGG~lv~~s~s  265 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ----------HEKDLKAG----LRAYFNVNFAGLNLVK--DGGILVTCSCS  265 (324)
T ss_dssp             TCCEEEEEECCCCSCS----------SGGGHHHH----HHHHHHHHHHHHTTEE--EEEEEEEEECC
T ss_pred             cCCCCchhcCCccccC----------CHHHHHHH----HHHHHHHHHHHHHHcC--CCcEEEEEeCC
Confidence            5689999998765432          11111111    1233446677777763  45777765543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.74  E-value=0.14  Score=37.25  Aligned_cols=84  Identities=12%  Similarity=0.072  Sum_probs=54.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-------CCceEEEeccCCCHHHHHHHHHH---H
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-------SPLVTYLHCDVSLEQDIQNLINV---T   86 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-------~~~v~~~~~D~s~~~~i~~~~~~---i   86 (285)
                      ++.|. |.|-+|.++|+.|++.|++|.+.+|+.+..+.+.+.-...       ......+..-+.+.+.++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            35555 5688999999999999999999999988876655432111       11233455556666777766543   3


Q ss_pred             HHHcCCccEEEECCC
Q 040531           87 ISKHGRLDILFNNAG  101 (285)
Q Consensus        87 ~~~~~~id~lv~~ag  101 (285)
                      .....+=+++|...-
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            334333456666543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.61  E-value=0.87  Score=36.88  Aligned_cols=144  Identities=15%  Similarity=0.160  Sum_probs=82.0

Q ss_pred             CCcEEEEecCC-CchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCC---CceEEEeccCCCHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGA-RGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSS---PLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        14 ~~k~vlItGas-~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +|+.||=..+. |+.+.+    .+..|+ .|+.++.+...++...+.+...+   .++.+++.|+-      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            68888865555 444433    445676 59999999998888887775433   46889998882      33344445


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccc
Q 040531           89 KHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAY  168 (285)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y  168 (285)
                      +..+.|+||...-.+....  +  ...+..          .....+++.+++.++  ++|.+++.|.... .        
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~--~--~~~~~~----------~~~~~L~~~a~~ll~--pgG~l~~~scs~~-~--------  268 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNK--K--EVFSVS----------KDYHKLIRQGLEILS--ENGLIIASTNAAN-M--------  268 (317)
T ss_dssp             TTCCEEEEEECCCCC---------CCCCHH----------HHHHHHHHHHHHTEE--EEEEEEEEECCTT-S--------
T ss_pred             hcCCCCEEEEcChhhccch--h--HHHHHH----------HHHHHHHHHHHHHcC--CCCEEEEEeCCcc-C--------
Confidence            5568999999865443210  1  111111          122345677777774  3566665443211 1        


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 040531          169 TVSKHAIVGLTKNTACELGKYGIRVNCIS  197 (285)
Q Consensus       169 ~asKaa~~~l~~~la~e~~~~~i~v~~v~  197 (285)
                      .     .+.|.+.+...+...+.++..+.
T Consensus       269 ~-----~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         269 T-----VSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             C-----HHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             C-----HHHHHHHHHHHHHHcCCeEEEec
Confidence            1     22333444444555667766664

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.58  E-value=0.035  Score=42.34  Aligned_cols=72  Identities=26%  Similarity=0.233  Sum_probs=53.3

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++.||+||=.|+++|+   ++..++..|+ +|+.++.++...+.+.+.+    .++.++.+|+.+.             
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~l-------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEI-------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGGC-------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhhc-------------
Confidence            47899999999988873   3344666775 5999999888776555443    4678899998532             


Q ss_pred             cCCccEEEECCCC
Q 040531           90 HGRLDILFNNAGV  102 (285)
Q Consensus        90 ~~~id~lv~~ag~  102 (285)
                      .+++|+||.|.-+
T Consensus       105 ~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 SGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             CCcceEEEeCccc
Confidence            2589999999654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.53  E-value=0.051  Score=41.22  Aligned_cols=83  Identities=18%  Similarity=0.226  Sum_probs=62.6

Q ss_pred             CCcEEE-EecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAI-VTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vl-ItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      .+.+++ +|-|+||..+++...+ . +..|+.+|++++.++...+.+.....++.+++.++++...+   +...  ..+.
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~   95 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEK   95 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSC
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCC
Confidence            455554 7778888888888876 3 46899999999999888887766677899999999775443   2211  1358


Q ss_pred             ccEEEECCCCC
Q 040531           93 LDILFNNAGVL  103 (285)
Q Consensus        93 id~lv~~ag~~  103 (285)
                      +|.++..-|+.
T Consensus        96 vdgIl~DlGvS  106 (192)
T d1m6ya2          96 VDGILMDLGVS  106 (192)
T ss_dssp             EEEEEEECSCC
T ss_pred             cceeeeccchh
Confidence            99999998874

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.32  E-value=0.1  Score=39.62  Aligned_cols=40  Identities=25%  Similarity=0.385  Sum_probs=34.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .+++||++.|.|- |.||+.+|+.+...|++|+..++....
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence            4689999999985 689999999999999999999876543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.15  E-value=0.18  Score=37.20  Aligned_cols=78  Identities=14%  Similarity=0.061  Sum_probs=52.2

Q ss_pred             CCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC------------------CceEEEeccCCCHHHHHHHHH
Q 040531           23 GARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS------------------PLVTYLHCDVSLEQDIQNLIN   84 (285)
Q Consensus        23 as~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~------------------~~v~~~~~D~s~~~~i~~~~~   84 (285)
                      |.|-+|.++++.|++.|++|.+.+|++++.+++.+.-....                  .+...+..-+.....+...+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            56889999999999999999999999999888876542111                  111223333444556666666


Q ss_pred             HHHHHcCCccEEEECC
Q 040531           85 VTISKHGRLDILFNNA  100 (285)
Q Consensus        85 ~i~~~~~~id~lv~~a  100 (285)
                      .+.....+=++++...
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6666555555666643

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.07  E-value=0.15  Score=40.31  Aligned_cols=74  Identities=19%  Similarity=0.178  Sum_probs=57.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..+|+++|=.|+++|+   ++..+++.|++|+.+|.++...+.+.+.+...+.++.++..|+.+      .     -..+
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPFG  183 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGGC
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----cccc
Confidence            4579999999999886   334567889999999999999998888877767777778777521      1     1236


Q ss_pred             CccEEEEC
Q 040531           92 RLDILFNN   99 (285)
Q Consensus        92 ~id~lv~~   99 (285)
                      +.|+++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            89999987

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.01  E-value=0.087  Score=39.67  Aligned_cols=64  Identities=17%  Similarity=0.127  Sum_probs=45.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH----------HhhcCCCceEEEeccCCC
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD----------SLLSSSPLVTYLHCDVSL   75 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~v~~~~~D~s~   75 (285)
                      ..+++++++.|.| .|.||+++++.+...|.+|+..++.........+          ++. ...++.++.+.+++
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l-~~sD~v~~~~plt~  112 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMY-PVCDVVTLNCPLHP  112 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHG-GGCSEEEECSCCCT
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHH-Hhccchhhcccccc
Confidence            4578999999998 4679999999999999999999985433222111          111 13456777777765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.98  E-value=0.1  Score=36.98  Aligned_cols=76  Identities=14%  Similarity=0.169  Sum_probs=51.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEE-EecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           17 IAIVTGGARGIGEATVRLFVKH-GAKVVI-ADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      .+.|.|++|..|+++++...+. +..++. +++.+. +....    ....+   +..|+|.++.....++...+.  ++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~----~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLT----DGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHH----TTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhc----cccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            4789999999999999988765 466544 444332 22211    12233   457999999999988876655  466


Q ss_pred             EEEECCCC
Q 040531           95 ILFNNAGV  102 (285)
Q Consensus        95 ~lv~~ag~  102 (285)
                      +|+-..|+
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            77777664

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.95  E-value=0.097  Score=39.82  Aligned_cols=39  Identities=33%  Similarity=0.413  Sum_probs=34.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .++.||++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4689999999986 56899999999999999999987543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.88  E-value=0.1  Score=40.96  Aligned_cols=35  Identities=20%  Similarity=0.445  Sum_probs=30.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEec
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADI   47 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r   47 (285)
                      .|++++|+|.| .||+|..++..|+..|.. +.++|.
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            47899999999 578999999999999964 788764

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.84  E-value=0.67  Score=37.44  Aligned_cols=80  Identities=11%  Similarity=0.035  Sum_probs=55.2

Q ss_pred             CCcEEEEec-CCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC---CCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTG-GARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS---SPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        14 ~~k~vlItG-as~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      +++.||=.. ++|+++.+    +++.|++|+.++.+...++.+.+.+...   ..++.+++.|+.      ++++...+.
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            577887554 44444443    4567999999999999888887766432   235888988873      334444555


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                      ..+.|+||.+.-.+
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            56899999986554

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.62  E-value=0.029  Score=42.55  Aligned_cols=45  Identities=18%  Similarity=0.243  Sum_probs=35.7

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHH
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALAD   57 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~   57 (285)
                      ++.|+  .+.|.||+. -|.++|..|++.|++|.+.+|+++..+...+
T Consensus         4 ~~~m~--KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           4 LLYLN--KAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             CCCEE--EEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             cceec--eEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            44443  578888766 5999999999999999999998887665544

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.62  E-value=0.22  Score=38.31  Aligned_cols=43  Identities=14%  Similarity=0.173  Sum_probs=36.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      ++++||..|++.|   ..+..|+++|++|+.+|-+++..+.+.++.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            6789999999887   458888999999999999999887776654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.52  E-value=0.23  Score=37.00  Aligned_cols=86  Identities=15%  Similarity=0.123  Sum_probs=54.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHH---------------
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQ---------------   77 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~---------------   77 (285)
                      ++.-.++|.||+ -.|...++-....|++|.++|.+.++++++.+..    .+  ++..+..+.+               
T Consensus        27 V~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~----~~--~i~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          27 VPPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESLG----GK--FITVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             ECCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT----CE--ECCC---------------------
T ss_pred             cCCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh----cc--eEEEeccccccccccccchhhcCHH
Confidence            345578888875 4589999999999999999999999877665433    22  1222211111               


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCC
Q 040531           78 DIQNLINVTISKHGRLDILFNNAGVLGN  105 (285)
Q Consensus        78 ~i~~~~~~i~~~~~~id~lv~~ag~~~~  105 (285)
                      ...+.-+.+.+....-|++|..+=+.+.
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCCc
Confidence            1112233344455679999998876644

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.46  E-value=0.067  Score=38.69  Aligned_cols=42  Identities=24%  Similarity=0.295  Sum_probs=35.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CeEEEEecCchhhHHHHHHh
Q 040531           17 IAIVTGGARGIGEATVRLFVKHG-AKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g-~~v~~~~r~~~~~~~~~~~~   59 (285)
                      .+.+.|+ |-+|.++++.|++.| +++++.+|++++.+.+.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4667766 999999999999887 88999999998887776654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.45  E-value=0.31  Score=34.60  Aligned_cols=87  Identities=10%  Similarity=0.107  Sum_probs=56.6

Q ss_pred             CCcEEEEecCC---CchhHHHHHHHHHCCCeEEEEecCchhhH--HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGA---RGIGEATVRLFVKHGAKVVIADIDDAAGI--ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        14 ~~k~vlItGas---~gIG~~ia~~la~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      +-|++.|.|||   +..|..+++.|.+.|++|+.+..+.....  .....+.+....+..+.. +...+.+..+++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            68999999999   67999999999999999988865433211  112222222222222111 1346777788887776


Q ss_pred             HcCCccEEEECCCCC
Q 040531           89 KHGRLDILFNNAGVL  103 (285)
Q Consensus        89 ~~~~id~lv~~ag~~  103 (285)
                      .  .+..++...|..
T Consensus        97 ~--g~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--GAKVVWFQYNTY  109 (139)
T ss_dssp             H--TCSEEEECTTCC
T ss_pred             h--CCCEEEEecccc
Confidence            6  467788877754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.28  E-value=0.031  Score=44.41  Aligned_cols=34  Identities=24%  Similarity=0.312  Sum_probs=29.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      +|.|+|+||+-. |..+|.+|++.|++|.++.+++
T Consensus         1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCCC
Confidence            588999988765 8999999999999999998654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.19  E-value=0.14  Score=39.49  Aligned_cols=78  Identities=17%  Similarity=0.099  Sum_probs=60.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|.+||..|+++|--.++..+++  |.+|+.+.++++-.....+.+.+.+ .++.++..|..+          -....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~----------g~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK----------GFPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG----------CCGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc----------CCcccCc
Confidence            68899999999998888888876  4679999999887777777776544 679999999853          1233468


Q ss_pred             ccEEEECCCCC
Q 040531           93 LDILFNNAGVL  103 (285)
Q Consensus        93 id~lv~~ag~~  103 (285)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999987763

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.17  E-value=0.28  Score=36.38  Aligned_cols=75  Identities=17%  Similarity=0.154  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +|.++|=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+.+.+  .++.++++|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            6889998887776   3345567778899999999999998888886654  57899999851          1223346


Q ss_pred             CccEEEECCC
Q 040531           92 RLDILFNNAG  101 (285)
Q Consensus        92 ~id~lv~~ag  101 (285)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999998643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.15  E-value=0.67  Score=34.45  Aligned_cols=40  Identities=25%  Similarity=0.167  Sum_probs=34.2

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      ..+++++++.|.| -|.||+.+++.+...|.+|+..++...
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            3468999999994 678999999999999999999987543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.12  E-value=0.27  Score=36.93  Aligned_cols=40  Identities=20%  Similarity=0.135  Sum_probs=34.4

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      ..+++||++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            34678999999975 67999999999999999999987644

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.90  E-value=0.079  Score=41.39  Aligned_cols=77  Identities=9%  Similarity=-0.051  Sum_probs=60.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      ..+++++|=.|++.|.   ++..|+++|.+|+.+|.+++.++.+.+.+...+.++.++..|+.+.+           ..+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccc
Confidence            3567899999988885   77888999999999999999888777777666778999999986531           124


Q ss_pred             CccEEEECCCC
Q 040531           92 RLDILFNNAGV  102 (285)
Q Consensus        92 ~id~lv~~ag~  102 (285)
                      +.|++++..+.
T Consensus       101 ~fD~i~~~~~~  111 (246)
T d1y8ca_         101 KFDLITCCLDS  111 (246)
T ss_dssp             CEEEEEECTTG
T ss_pred             cccccceeeee
Confidence            79999875443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.032  Score=47.95  Aligned_cols=35  Identities=23%  Similarity=0.445  Sum_probs=30.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADID   48 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~   48 (285)
                      |++..|||.|+ ||||.++++.|+..|. ++.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            57788999998 6799999999999997 58888753

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.72  E-value=0.2  Score=34.19  Aligned_cols=36  Identities=28%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|.+.-
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            367888876 678999999999999999999986653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.65  E-value=0.056  Score=40.48  Aligned_cols=39  Identities=23%  Similarity=0.257  Sum_probs=33.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      -+.|.++|.||+.. |.+.|..|+++|++|.++.+++.-.
T Consensus        41 ~~~k~V~IIGaGPA-GL~AA~~la~~G~~Vtl~E~~~~~G   79 (179)
T d1ps9a3          41 VQKKNLAVVGAGPA-GLAFAINAAARGHQVTLFDAHSEIG   79 (179)
T ss_dssp             SSCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred             CCCcEEEEECccHH-HHHHHHHHHhhccceEEEeccCccC
Confidence            56889999998655 9999999999999999999876543

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.64  E-value=0.38  Score=35.26  Aligned_cols=78  Identities=12%  Similarity=0.074  Sum_probs=49.1

Q ss_pred             CCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGA-RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas-~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|+++|=.|++ |.+|    .+++++|++|+.++.++...+.+.+.+...+....+...|.   +.   +.........+
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~---~~~~~~~~~~~  110 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EV---FLPEAKAQGER  110 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HH---HHHHHHHTTCC
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hc---ccccccccCCc
Confidence            67777755544 4444    35667899999999999998888777765444434443333   22   22223334457


Q ss_pred             ccEEEECCC
Q 040531           93 LDILFNNAG  101 (285)
Q Consensus        93 id~lv~~ag  101 (285)
                      .|+++.+.-
T Consensus       111 fD~If~DPP  119 (171)
T d1ws6a1         111 FTVAFMAPP  119 (171)
T ss_dssp             EEEEEECCC
T ss_pred             cceeEEccc
Confidence            999998753

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.49  E-value=0.64  Score=36.83  Aligned_cols=79  Identities=14%  Similarity=0.077  Sum_probs=55.1

Q ss_pred             CcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           15 GKIAIVTGGARG-IGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        15 ~k~vlItGas~g-IG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      .++++-.|+++| |+.+++ +  ...++|+.++.+++.++-+.+.+...+  .++.+...|+.+.         ....++
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            345665555544 555544 3  356889999999999988888776544  4577788888642         233457


Q ss_pred             CccEEEECCCCCCC
Q 040531           92 RLDILFNNAGVLGN  105 (285)
Q Consensus        92 ~id~lv~~ag~~~~  105 (285)
                      ++|++|.|.-+...
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            89999999988743

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.44  E-value=0.24  Score=37.88  Aligned_cols=79  Identities=18%  Similarity=0.231  Sum_probs=58.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      +|.+||-.|+++|--.++..++......|+.++.+++..+...+.+...+ .++.++..|..+.          ....+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~----------~~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----------VPEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc----------cccccc
Confidence            68899999988887666666666666789999999998888888776543 4577777776431          122357


Q ss_pred             ccEEEECCCC
Q 040531           93 LDILFNNAGV  102 (285)
Q Consensus        93 id~lv~~ag~  102 (285)
                      .|.++.+++.
T Consensus       145 fD~I~~~~~~  154 (213)
T d1dl5a1         145 YDVIFVTVGV  154 (213)
T ss_dssp             EEEEEECSBB
T ss_pred             hhhhhhhccH
Confidence            9999988765

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.35  E-value=0.76  Score=31.17  Aligned_cols=81  Identities=11%  Similarity=0.119  Sum_probs=56.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ||++||.--..-+-..+...|.+.|++|+....+.+..-+   .+.+....+.++..++-+.+. -++++++.+....+-
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~---~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~~~~p   76 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE---KYKELKPDIVTMDITMPEMNG-IDAIKEIMKIDPNAK   76 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHCTTCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHH---HHHhccCCEEEEecCCCCCCH-HHHHHHHHHhCCCCc
Confidence            7899999999999999999999999998766555444333   333335666666555555444 355666777777777


Q ss_pred             EEEEC
Q 040531           95 ILFNN   99 (285)
Q Consensus        95 ~lv~~   99 (285)
                      +++..
T Consensus        77 vi~ls   81 (118)
T d1u0sy_          77 IIVCS   81 (118)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            77764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.19  E-value=0.21  Score=34.50  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=30.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      -|.++|.|| |-||.++|..|++.|.+|.++.+++.-
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            367777775 679999999999999999999986553

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.13  E-value=0.11  Score=38.78  Aligned_cols=38  Identities=21%  Similarity=0.242  Sum_probs=34.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .++||++.|.|.+. ||+.+++.+...|.+|+..+|...
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            48999999999866 999999999999999999998654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.33  Score=39.24  Aligned_cols=74  Identities=18%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++||+||-.|+++|+   ++..+++.|+ +|+.++.++.. ....+...+.  ..++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            4689999999999886   5667788896 58889877654 3334433332  3568999999876321          


Q ss_pred             HcCCccEEEEC
Q 040531           89 KHGRLDILFNN   99 (285)
Q Consensus        89 ~~~~id~lv~~   99 (285)
                      ...++|+||..
T Consensus        99 ~~~~~D~Ivse  109 (311)
T d2fyta1          99 PVEKVDVIISE  109 (311)
T ss_dssp             SCSCEEEEEEC
T ss_pred             ccccceEEEEe
Confidence            12479999985

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.96  E-value=0.17  Score=36.46  Aligned_cols=40  Identities=15%  Similarity=0.126  Sum_probs=31.7

Q ss_pred             CCcEEEEe-cCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           14 EGKIAIVT-GGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        14 ~~k~vlIt-Gas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .++.++|. .+++-||.++|..|+++|.+|.++.+.+.-+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~   78 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANY   78 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTH
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcccc
Confidence            35555555 46789999999999999999999998765443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.72  E-value=0.14  Score=35.48  Aligned_cols=37  Identities=16%  Similarity=0.206  Sum_probs=31.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      +++.++|.|| |-+|.++|..|+++|.+|.++.+.+.-
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            3678877775 689999999999999999999987654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.67  E-value=0.93  Score=32.25  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=52.6

Q ss_pred             cCCCcEEEEecCC-CchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcCC--CceEEEeccCCCHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGA-RGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSSS--PLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        12 ~l~~k~vlItGas-~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +++|+.+|=.|++ |.+|.    +.+.+|+ +|+.++.+++..+...+.+...+  .++.+++.|..+      ++   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            4789999866655 44555    3456776 69999999998887777775543  458999988532      22   2


Q ss_pred             HHcCCccEEEECC
Q 040531           88 SKHGRLDILFNNA  100 (285)
Q Consensus        88 ~~~~~id~lv~~a  100 (285)
                      ...++.|+++.+.
T Consensus        79 ~~~~~fDiIf~DP   91 (152)
T d2esra1          79 CLTGRFDLVFLDP   91 (152)
T ss_dssp             HBCSCEEEEEECC
T ss_pred             ccccccceeEech
Confidence            2345799998863

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.64  E-value=0.13  Score=37.08  Aligned_cols=41  Identities=12%  Similarity=0.190  Sum_probs=34.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHh
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSL   59 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~   59 (285)
                      +.|. |.|-+|.++++.|.+.|+++++.+|+.++.+++.++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4444 6788999999999999999999999998887776655

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.55  E-value=0.15  Score=35.34  Aligned_cols=36  Identities=36%  Similarity=0.447  Sum_probs=30.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      ++|.++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            577888885 468999999999999999999988654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.34  E-value=0.64  Score=32.62  Aligned_cols=86  Identities=16%  Similarity=0.205  Sum_probs=50.1

Q ss_pred             CCcEEEEecCC---CchhHHHHHHHHHCCCeEEEEecCchh----hHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGA---RGIGEATVRLFVKHGAKVVIADIDDAA----GIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVT   86 (285)
Q Consensus        14 ~~k~vlItGas---~gIG~~ia~~la~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i   86 (285)
                      +-|++.|.|||   +..|..+.+.|.+.|+.++.+--+...    .......+.+....+..+.+ +...+.+.+++++.
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence            67899999999   669999999999999998887543321    11111122222222222211 12355666666665


Q ss_pred             HHHcCCccEEEECCCC
Q 040531           87 ISKHGRLDILFNNAGV  102 (285)
Q Consensus        87 ~~~~~~id~lv~~ag~  102 (285)
                      .+.  .+..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            554  24555655554

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.28  E-value=0.15  Score=37.16  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=37.9

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      .+..-+.||+++|.|- |-+|+.+|.++...|++|+++..++-..-
T Consensus        16 ~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~al   60 (163)
T d1v8ba1          16 ATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAI   60 (163)
T ss_dssp             HHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHH
T ss_pred             HhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhH
Confidence            3445689999999986 56899999999999999999999886543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.28  E-value=0.15  Score=39.76  Aligned_cols=35  Identities=23%  Similarity=0.285  Sum_probs=30.2

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEe
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVK-HGAKVVIAD   46 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~   46 (285)
                      .++++++++|-| .|.+|+.+++.|++ .|+.|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            478999999986 88999999999985 599988765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.11  Score=36.13  Aligned_cols=35  Identities=14%  Similarity=0.182  Sum_probs=30.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .|.++|.||+ -||.++|..|++.|.+|.++.|++.
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeeccc
Confidence            3678888875 6999999999999999999998654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.24  E-value=0.13  Score=39.83  Aligned_cols=34  Identities=26%  Similarity=0.320  Sum_probs=28.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      .|.|+|.||+ -.|..+|..|+++|++|.+++|+.
T Consensus         6 ~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGSG-VIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4467788764 559999999999999999999864

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.12  E-value=0.31  Score=37.51  Aligned_cols=79  Identities=20%  Similarity=0.141  Sum_probs=60.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC------CCceEEEeccCCCHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS------SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      +|..||-.|.++|--.++..++.....+|+.++++++..+...+.+.+.      ...+.+...|..+          ..
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~----------~~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM----------GY  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG----------CC
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccc----------cc
Confidence            5789999999999888888888888889999999998888777766432      2457777788642          11


Q ss_pred             HHcCCccEEEECCCC
Q 040531           88 SKHGRLDILFNNAGV  102 (285)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (285)
                      ...+++|.++.+++.
T Consensus       146 ~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             GGGCCEEEEEECSBB
T ss_pred             chhhhhhhhhhhcch
Confidence            223579999998775

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.97  E-value=1  Score=32.19  Aligned_cols=51  Identities=18%  Similarity=0.192  Sum_probs=34.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEE--ecCchhhHHHHHHhhcCCCceEEE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHG--AKVVIA--DIDDAAGIALADSLLSSSPLVTYL   69 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g--~~v~~~--~r~~~~~~~~~~~~~~~~~~v~~~   69 (285)
                      |.+.|.|+||.||.....-+.+..  .+|+.+  .+|-+.+.+...+.   .++..++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f---~pk~v~i   56 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF---SPRYAVM   56 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH---CCSEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH---hhccccc
Confidence            578999999999999999888764  566554  34444444444444   5555444

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=0.2  Score=40.34  Aligned_cols=25  Identities=16%  Similarity=0.203  Sum_probs=21.9

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEecC
Q 040531           24 ARGIGEATVRLFVKHGAKVVIADID   48 (285)
Q Consensus        24 s~gIG~~ia~~la~~g~~v~~~~r~   48 (285)
                      ||..|.++|++|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            3678999999999999999998754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.79  E-value=0.15  Score=39.49  Aligned_cols=39  Identities=18%  Similarity=0.407  Sum_probs=32.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      ..-..|.++|.||+-. |.+.|.+|+++|+.|.++.++.+
T Consensus        45 ~~~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          45 QTKNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CCSSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cccCCceEEEEcccHH-HHHHHHHHHHhccceeeEeeccc
Confidence            3457899999998765 99999999999999999987543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.72  E-value=0.057  Score=36.64  Aligned_cols=40  Identities=18%  Similarity=0.263  Sum_probs=32.5

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      ..+++||+|+|.|++.. |..+|..|++.+.++++..|+..
T Consensus        27 ~~~f~gK~VlVVG~g~S-a~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEECCCCC-HHHHHHHHHHhcCEEEEEEecCc
Confidence            45799999999998744 88999999988888777776544

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.57  E-value=0.14  Score=40.56  Aligned_cols=35  Identities=26%  Similarity=0.350  Sum_probs=31.7

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD   46 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~   46 (285)
                      .+++|++++|.| .|.+|+.+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            478999999999 79999999999999999988764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.50  E-value=0.96  Score=32.66  Aligned_cols=74  Identities=11%  Similarity=-0.020  Sum_probs=41.0

Q ss_pred             EEEEecCCCchhHHHHHH-HHHC-----CCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           17 IAIVTGGARGIGEATVRL-FVKH-----GAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~-la~~-----g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .+.|.||++ +|..++-. +++.     ...++++|.++++++...+..... ...... ..- ++.+   +.       
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~~---~~-------   68 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTFE---GA-------   68 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSHH---HH-------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCcc---cc-------
Confidence            477888865 56555533 2222     357999999998877544333221 111221 121 2222   11       


Q ss_pred             cCCccEEEECCCCC
Q 040531           90 HGRLDILFNNAGVL  103 (285)
Q Consensus        90 ~~~id~lv~~ag~~  103 (285)
                      ...-|++|..+|..
T Consensus        69 l~~aDvVVita~~~   82 (162)
T d1up7a1          69 VVDAKYVIFQFRPG   82 (162)
T ss_dssp             HTTCSEEEECCCTT
T ss_pred             cCCCCEEEEecccC
Confidence            23689999999864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.37  E-value=0.1  Score=38.85  Aligned_cols=36  Identities=8%  Similarity=0.155  Sum_probs=29.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCchh
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDDAA   51 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~   51 (285)
                      +|.|+|.||+ -.|..+|..|+++|++ |.++.+++.-
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            5778888875 5599999999999985 8888876543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.32  E-value=0.13  Score=39.98  Aligned_cols=35  Identities=17%  Similarity=0.240  Sum_probs=29.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+.|+|+||+-. |..+|..|+++|.+|+++.|+.+
T Consensus         4 ~~kV~IiGaG~a-Gl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGGSIS-GLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECcCHH-HHHHHHHHHHCCCCEEEEeCCCC
Confidence            467889988755 88999999999999999998654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.30  E-value=1.6  Score=29.46  Aligned_cols=84  Identities=11%  Similarity=0.077  Sum_probs=50.4

Q ss_pred             cEEEEecCC---CchhHHHHHHHHHCCCeEEEEecCchhhH--HHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           16 KIAIVTGGA---RGIGEATVRLFVKHGAKVVIADIDDAAGI--ALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        16 k~vlItGas---~gIG~~ia~~la~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.+...  .....+.+....+..... ....+.+.+++++..+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHhc-
Confidence            789999999   66899999999999999888764433211  111222222222221111 13456666777766654 


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                       .+..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             35666666554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.26  E-value=0.17  Score=39.64  Aligned_cols=34  Identities=32%  Similarity=0.484  Sum_probs=31.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD   46 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~   46 (285)
                      +++|++++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            79999999997 78999999999999999988765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.07  E-value=0.11  Score=41.64  Aligned_cols=36  Identities=14%  Similarity=0.334  Sum_probs=31.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      +.|.|+|+||+-. |..+|.+|+++|++|.++.+++.
T Consensus        29 ~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCCCC
Confidence            5678999998765 99999999999999999987654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.85  E-value=0.54  Score=36.15  Aligned_cols=75  Identities=20%  Similarity=0.134  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.+||-.|+++|--.+   .|++.+.+|+.++++++......+.+ ....++.++..|...-          ....++.
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~-~~~~nv~~~~~d~~~g----------~~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLL-SYYNNIKLILGDGTLG----------YEEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHH-TTCSSEEEEESCGGGC----------CGGGCCE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHH-hcccccccccCchhhc----------chhhhhH
Confidence            68899999999885444   45566779999998888776655544 3456788999887531          1224679


Q ss_pred             cEEEECCCC
Q 040531           94 DILFNNAGV  102 (285)
Q Consensus        94 d~lv~~ag~  102 (285)
                      |.++.+++.
T Consensus       136 D~Iiv~~a~  144 (224)
T d1vbfa_         136 DRVVVWATA  144 (224)
T ss_dssp             EEEEESSBB
T ss_pred             HHHHhhcch
Confidence            999988765

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.85  E-value=0.15  Score=41.52  Aligned_cols=38  Identities=26%  Similarity=0.409  Sum_probs=31.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhh
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAG   52 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~   52 (285)
                      +.|.++|.||+=. |..+|..|++.|++|.++.++..-+
T Consensus         1 k~KKI~IIGaG~s-GL~aA~~L~k~G~~V~viEk~~~iG   38 (314)
T d2bi7a1           1 KSKKILIVGAGFS-GAVIGRQLAEKGHQVHIIDQRDHIG   38 (314)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHhCCCCEEEEECCCCCc
Confidence            5788999998754 8899999999999999998766543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.73  E-value=0.19  Score=37.26  Aligned_cols=33  Identities=24%  Similarity=0.301  Sum_probs=27.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            5677877 56799999999999999999988544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.37  E-value=0.31  Score=36.75  Aligned_cols=38  Identities=13%  Similarity=0.159  Sum_probs=32.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      +.|. |.|-+|..+|..|++.|++|+.+|.+++..+.+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            5566 6788999999999999999999999887765554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.24  E-value=0.31  Score=33.29  Aligned_cols=38  Identities=18%  Similarity=0.246  Sum_probs=32.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .++|.++|.|| |-||.++|..|++.|..|.++.|.+.-
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence            45788888875 688999999999999999999986543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.75  E-value=0.32  Score=33.34  Aligned_cols=35  Identities=23%  Similarity=0.222  Sum_probs=29.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+.++|.|| |-||.++|..|++.|..|.++.+++.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            467788875 68999999999999999999987654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=88.69  E-value=1.5  Score=29.59  Aligned_cols=81  Identities=15%  Similarity=0.176  Sum_probs=55.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLD   94 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id   94 (285)
                      ||.+||.--...+-..+.+.|.+.|++|..+..-.+.    .+.+.+....+.++...+-+.+.+ ++++++.+....+-
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~ea----l~~~~~~~~dlillD~~mP~~~G~-el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQA----LDIVTKERPDLVLLDMKIPGMDGI-EILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHH----HHHHHHHCCSEEEEESCCTTCCHH-HHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHH----HHHHHhCCCCEEEEeccCCCCCHH-HHHHHHHHhCCCCc
Confidence            6789999999999999999999999998876633333    333333355666665555454443 55666777766677


Q ss_pred             EEEECC
Q 040531           95 ILFNNA  100 (285)
Q Consensus        95 ~lv~~a  100 (285)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            666653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.44  E-value=0.33  Score=34.71  Aligned_cols=38  Identities=11%  Similarity=0.054  Sum_probs=29.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHH
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALA   56 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~   56 (285)
                      +.|. |.|-+|+++++.|++.|+.|+..+++++......
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            4555 4599999999999999999999887766554433

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.34  E-value=0.34  Score=38.86  Aligned_cols=36  Identities=25%  Similarity=0.306  Sum_probs=32.1

Q ss_pred             cccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 040531           10 YKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIAD   46 (285)
Q Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~   46 (285)
                      ..+++||+++|-|- |.+|+.+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            34799999999986 7999999999999999988775

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.32  E-value=0.19  Score=38.20  Aligned_cols=32  Identities=28%  Similarity=0.230  Sum_probs=26.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      |+|.||+ --|..+|.+|+++|.+|.++.++..
T Consensus         8 viViGaG-~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGTG-ITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            6788754 4499999999999999999988753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.97  E-value=0.38  Score=37.47  Aligned_cols=34  Identities=29%  Similarity=0.423  Sum_probs=28.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEe
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVK-HGAKVVIAD   46 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~-~g~~v~~~~   46 (285)
                      +++||+++|-|- |.+|..+++.|++ .|+.|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            589999999987 6699999999986 488887664

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.71  E-value=0.23  Score=36.24  Aligned_cols=84  Identities=10%  Similarity=0.105  Sum_probs=52.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEE-EecCchhh-HHHHHHh--------------hcCCCceEEEeccCCCHHH
Q 040531           16 KIAIVTGGARGIGEATVRLFVKH-GAKVVI-ADIDDAAG-IALADSL--------------LSSSPLVTYLHCDVSLEQD   78 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~-g~~v~~-~~r~~~~~-~~~~~~~--------------~~~~~~v~~~~~D~s~~~~   78 (285)
                      -.+.|.|++|..|+++++...+. +..++. ++|..... ..-..++              ........ +..|+|.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            36899999999999999999876 455433 34432110 0000000              00001111 4589999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCC
Q 040531           79 IQNLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        79 i~~~~~~i~~~~~~id~lv~~ag~  102 (285)
                      ..+.++...+.  ++.+|+-..|+
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99988865554  57788887774

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.67  E-value=1.4  Score=32.56  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=55.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCC-CceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSS-PLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      .+++..||=.|++.|  + .+..|+++|++|+.++.++..++.+.+...+.+ ..+.+...|+.+..-           .
T Consensus        28 ~~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             TSCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------C
T ss_pred             cCCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------c
Confidence            356678999998655  3 567889999999999999998887776665544 347788888765320           1


Q ss_pred             CCccEEEECCCC
Q 040531           91 GRLDILFNNAGV  102 (285)
Q Consensus        91 ~~id~lv~~ag~  102 (285)
                      +..|+|+.+...
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            468999886543

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=87.52  E-value=2.3  Score=28.77  Aligned_cols=83  Identities=6%  Similarity=-0.029  Sum_probs=55.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |++.++||.-=...+-..+...|.+.|++|..+. +.   ++..+.+.+....+......+-+.+. -++++++.+....
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~~---~~al~~~~~~~~dlvi~D~~mp~~~G-~e~~~~lr~~~~~   75 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQ-SA---EAFLAFAPDVRNGVLVTDLRMPDMSG-VELLRNLGDLKIN   75 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEES-CH---HHHHHHGGGCCSEEEEEECCSTTSCH-HHHHHHHHHTTCC
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CH---HHHHHHHhhcCCcEEEEeccCccccc-hHHHHHHHhcCCC
Confidence            4567899999999999999999999999987654 33   33444454444555554444445443 3556667766666


Q ss_pred             ccEEEECC
Q 040531           93 LDILFNNA  100 (285)
Q Consensus        93 id~lv~~a  100 (285)
                      +-+++..+
T Consensus        76 ~~iI~lt~   83 (123)
T d1dbwa_          76 IPSIVITG   83 (123)
T ss_dssp             CCEEEEEC
T ss_pred             CeEEEEEe
Confidence            76666643

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.50  E-value=0.28  Score=38.73  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=32.1

Q ss_pred             CCcEEEEecCCCchhHHH-----HHHHHHCCCeEEEEecCch
Q 040531           14 EGKIAIVTGGARGIGEAT-----VRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~i-----a~~la~~g~~v~~~~r~~~   50 (285)
                      .++.++|+.|-||+|+..     |..|+++|.+|.++|-+.+
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            567778888899999986     7999999999999998865

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.48  E-value=0.15  Score=40.92  Aligned_cols=78  Identities=9%  Similarity=0.013  Sum_probs=49.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCc-----eEEEeccCCCHHHHHHHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPL-----VTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-----v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .+++||=.|++.|.   ++..|+++|++|+.+|.+++.++.+.+........     .....+|....+.  .    + .
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~-~  125 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK--D----V-P  125 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH--H----S-C
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc--c----c-C
Confidence            46789999988774   46677889999999999999887776665443322     3344455432211  0    0 1


Q ss_pred             HcCCccEEEECCC
Q 040531           89 KHGRLDILFNNAG  101 (285)
Q Consensus        89 ~~~~id~lv~~ag  101 (285)
                      ..+..|.+++...
T Consensus       126 ~~~~fd~v~~~~~  138 (292)
T d1xvaa_         126 AGDGFDAVICLGN  138 (292)
T ss_dssp             CTTCEEEEEECSS
T ss_pred             CCCCceEEEEecC
Confidence            1236888887543

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.38  E-value=2  Score=31.42  Aligned_cols=79  Identities=13%  Similarity=0.225  Sum_probs=54.9

Q ss_pred             cCCCcEEE-EecCCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHH
Q 040531           12 TLEGKIAI-VTGGARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus        12 ~l~~k~vl-ItGas~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .++|+++| +..|+|.+|.+    .+++|+. |++++.+.+..+.+.+.+...  ..++.++..|+.      ++++...
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            46788888 44455667765    4557875 999999999888877776532  346888998883      3344444


Q ss_pred             HHcCCccEEEECC
Q 040531           88 SKHGRLDILFNNA  100 (285)
Q Consensus        88 ~~~~~id~lv~~a  100 (285)
                      +...+.|+|+...
T Consensus       109 ~~~~~fDlIflDP  121 (182)
T d2fhpa1         109 EEKLQFDLVLLDP  121 (182)
T ss_dssp             HTTCCEEEEEECC
T ss_pred             ccCCCcceEEech
Confidence            4455799998864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.24  E-value=0.26  Score=43.22  Aligned_cols=36  Identities=19%  Similarity=0.252  Sum_probs=30.1

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEec
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADI   47 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r   47 (285)
                      ..|++.+|+|.|+ ||+|.++++-|+..|. ++.++|.
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            3577889999987 7899999999999995 4777754

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.11  E-value=2.1  Score=29.00  Aligned_cols=82  Identities=15%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      |+..++||.--...+...+...|.+.|++|..+..-.+    ..+.+.+....+..+...+-+.+.+ ++++++.+.+..
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~----a~~~l~~~~~dlii~D~~mp~~~G~-el~~~l~~~~~~   75 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNE----VLAALASKTPDVLLSDIRMPGMDGL-ALLKQIKQRHPM   75 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHH----HHHHHTTCCCSEEEECCSSSSSTTH-HHHHHHHHHSSS
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHH----HHHHHHhCCCCEEEehhhcCCchHH-HHHHHHHHhCCC
Confidence            34567999999999999999999999999987664333    3334444445554444444333333 456667777666


Q ss_pred             ccEEEEC
Q 040531           93 LDILFNN   99 (285)
Q Consensus        93 id~lv~~   99 (285)
                      +-+++..
T Consensus        76 ~piI~~t   82 (123)
T d1krwa_          76 LPVIIMT   82 (123)
T ss_dssp             CCEEESC
T ss_pred             CeEEEEe
Confidence            6666554

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=86.34  E-value=4.9  Score=29.63  Aligned_cols=143  Identities=11%  Similarity=0.029  Sum_probs=79.1

Q ss_pred             CCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHc
Q 040531           13 LEGKIAIVTGGA--RGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKH   90 (285)
Q Consensus        13 l~~k~vlItGas--~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~   90 (285)
                      ..+++++|....  .....+++..|.+.|..++.+.-...                       .+.+.   +.+ .....
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~---l~~-~~~~~   75 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDE---LAE-RLRSV   75 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHH---HHH-HHTTS
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHH---HHH-Hhhcc
Confidence            456655555433  34667788888888887766543221                       12222   222 23344


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccccccCCCCCccchh
Q 040531           91 GRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVASLMGGLGPHAYTV  170 (285)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~~~~~~~~~~~Y~a  170 (285)
                      +.++.||+..+.....     ....+.      ....+...+.++|++...   ....++.+++..+. ...++-..-..
T Consensus        76 ~~~~~vv~l~~~~~~~-----~~~~~~------~~~~~~~~l~l~qal~~~---~~~~~l~~vT~~a~-~~~~~d~~~~p  140 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAE-----PEEAPL------ALASLADTLSLVQAMVSA---ELGCPLWTVTESAV-ATGPFERVRNA  140 (209)
T ss_dssp             CCCSEEEECTTTTCCC-----CSSCGG------GCHHHHHHHHHHHHHHHT---TCCCCEEEEEESCS-CSSTTSCCSCG
T ss_pred             CCCCeEEEeCCCCCCC-----CcchhH------HHHHHHHHHHHHHHHHhC---CCCCcEEEEEcCCc-ccCCCcccCCH
Confidence            6789999976653221     111110      112244555667766542   23456666665332 22223334467


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 040531          171 SKHAIVGLTKNTACELGKYGIRVNCIS  197 (285)
Q Consensus       171 sKaa~~~l~~~la~e~~~~~i~v~~v~  197 (285)
                      ..+++.+|+|+++.|+....+++..+.
T Consensus       141 ~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         141 AHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             GGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             hHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            899999999999999887445555543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.91  E-value=0.63  Score=32.43  Aligned_cols=37  Identities=22%  Similarity=0.262  Sum_probs=31.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      ++|.++|.|| |-+|.++|..|++.|.+|.++.+.+.-
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            4678888864 789999999999999999999986654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=85.79  E-value=1.1  Score=31.94  Aligned_cols=54  Identities=19%  Similarity=0.247  Sum_probs=35.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCchhhHHHHHHhhcCCCceEEE
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKH--GAKVVIADIDDAAGIALADSLLSSSPLVTYL   69 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~   69 (285)
                      -|++.|.|+||.||.....-+.+.  .++|+.++-+. ....+.+++.+-.++..++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i   57 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVI   57 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhcccccee
Confidence            489999999999999999888765  46666654332 2233444444446665544

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.70  E-value=1.8  Score=30.72  Aligned_cols=81  Identities=4%  Similarity=-0.004  Sum_probs=51.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC------CCceEEEeccCCCHHHHHHHHHHHHHHcC
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS------SPLVTYLHCDVSLEQDIQNLINVTISKHG   91 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~s~~~~i~~~~~~i~~~~~   91 (285)
                      +-+.|- |-+|.++|+.|++.|+.+ +..|+.++..+..+.....      -.+...+...+.+.+.+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 889999999999988765 5677777766666654211      01222333445566777777777766555


Q ss_pred             CccEEEECC
Q 040531           92 RLDILFNNA  100 (285)
Q Consensus        92 ~id~lv~~a  100 (285)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            555566543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.70  E-value=0.97  Score=34.58  Aligned_cols=79  Identities=14%  Similarity=0.119  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-C----CeEEEEecCchhhHHHHHHhhc------CCCceEEEeccCCCHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKH-G----AKVVIADIDDAAGIALADSLLS------SSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~-g----~~v~~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      ++..||..|.++|--.++..+++.. |    .+|+.++++++-.+...+.+.+      ...++.++..|..+       
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~-------  152 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-------  152 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccc-------
Confidence            5789999999999888888888743 4    4799999888766655544422      12468889998753       


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 040531           83 INVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~ag~  102 (285)
                         .....++.|.++.+++.
T Consensus       153 ---~~~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         153 ---GYPPNAPYNAIHVGAAA  169 (223)
T ss_dssp             ---CCGGGCSEEEEEECSCB
T ss_pred             ---ccccccceeeEEEEeec
Confidence               11234689999998875

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=85.55  E-value=4.9  Score=28.90  Aligned_cols=77  Identities=14%  Similarity=0.190  Sum_probs=42.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC-----CCeEEEEecCchhhHHHHHHhhc----CCCceEEEeccCCCHHHHHHHHHH
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKH-----GAKVVIADIDDAAGIALADSLLS----SSPLVTYLHCDVSLEQDIQNLINV   85 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~-----g~~v~~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~s~~~~i~~~~~~   85 (285)
                      ...+.|.||++.-...++..++..     +..+++.|.++++++...+.+..    .+........  +|.   .+.   
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~ea---   74 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEA---   74 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHH---
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhc---
Confidence            446777788664333333444432     24799999999988754444322    1222222211  121   111   


Q ss_pred             HHHHcCCccEEEECCCCC
Q 040531           86 TISKHGRLDILFNNAGVL  103 (285)
Q Consensus        86 i~~~~~~id~lv~~ag~~  103 (285)
                          ...-|+||+.+|..
T Consensus        75 ----l~~AD~Vvitag~~   88 (167)
T d1u8xx1          75 ----FTDVDFVMAHIRVG   88 (167)
T ss_dssp             ----HSSCSEEEECCCTT
T ss_pred             ----cCCCCEEEECCCcC
Confidence                24789999999874

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=85.55  E-value=1.4  Score=33.10  Aligned_cols=78  Identities=15%  Similarity=0.146  Sum_probs=56.2

Q ss_pred             cCC-CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHHH
Q 040531           12 TLE-GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTISK   89 (285)
Q Consensus        12 ~l~-~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~~   89 (285)
                      .++ ++.||=.|++.|.-   +..|++.|.+|+.++-++...+.+.+.+.+. ..++.++.+|..+.. .         .
T Consensus        12 ~l~~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~---------~   78 (231)
T d1vl5a_          12 ALKGNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F---------T   78 (231)
T ss_dssp             TCCSCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S---------C
T ss_pred             CCCCcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c---------c
Confidence            344 68999999888743   4667888999999999988877766655443 467899999986631 0         1


Q ss_pred             cCCccEEEECCCC
Q 040531           90 HGRLDILFNNAGV  102 (285)
Q Consensus        90 ~~~id~lv~~ag~  102 (285)
                      .+..|+++++...
T Consensus        79 ~~~fD~v~~~~~l   91 (231)
T d1vl5a_          79 DERFHIVTCRIAA   91 (231)
T ss_dssp             TTCEEEEEEESCG
T ss_pred             ccccccccccccc
Confidence            2579999887654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.45  E-value=0.34  Score=36.37  Aligned_cols=31  Identities=19%  Similarity=0.193  Sum_probs=27.6

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHHCCCeEEEEe
Q 040531           16 KIAIVTGGARGIGEA-----TVRLFVKHGAKVVIAD   46 (285)
Q Consensus        16 k~vlItGas~gIG~~-----ia~~la~~g~~v~~~~   46 (285)
                      |.+.|||-++|+|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            788999999999985     6789999999999986

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.43  E-value=1.1  Score=35.98  Aligned_cols=75  Identities=19%  Similarity=0.237  Sum_probs=51.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++||+||-.|+++|+   ++..+++.|+ +|+.++.++. .....+.+...  ..++.++..|+.+.+          .
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE----------L   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC----------C
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc----------c
Confidence            3589999999998885   5667788886 4888887653 34444444332  456999999987632          1


Q ss_pred             HcCCccEEEECC
Q 040531           89 KHGRLDILFNNA  100 (285)
Q Consensus        89 ~~~~id~lv~~a  100 (285)
                      ...++|+++...
T Consensus        97 ~~~~~D~ivs~~  108 (316)
T d1oria_          97 PVEKVDIIISEW  108 (316)
T ss_dssp             SSSCEEEEEECC
T ss_pred             ccceeEEEeeee
Confidence            234799998863

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.97  E-value=0.43  Score=34.34  Aligned_cols=35  Identities=17%  Similarity=0.374  Sum_probs=28.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA--KVVIADIDD   49 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~--~v~~~~r~~   49 (285)
                      .||.++|.||+- +|.++|..|.+.+.  +|.++++++
T Consensus         1 ~gkrivIvGgG~-~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGT-GGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccH-HHHHHHHHHHHcCCCCcEEEEECCC
Confidence            489999999864 49999999999884  688887654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.74  E-value=0.54  Score=32.48  Aligned_cols=35  Identities=17%  Similarity=0.309  Sum_probs=29.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      ..+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3577888875 6899999999999999999998754

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.69  E-value=0.52  Score=35.80  Aligned_cols=34  Identities=29%  Similarity=0.459  Sum_probs=29.8

Q ss_pred             CcEEEEecCCCchhHH-----HHHHHHHCCCeEEEEecC
Q 040531           15 GKIAIVTGGARGIGEA-----TVRLFVKHGAKVVIADID   48 (285)
Q Consensus        15 ~k~vlItGas~gIG~~-----ia~~la~~g~~v~~~~r~   48 (285)
                      +|++.|+|+-||.|+.     +|..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999985     678889999999999865

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.63  E-value=4.9  Score=31.54  Aligned_cols=129  Identities=16%  Similarity=0.046  Sum_probs=75.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCC
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGR   92 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~   92 (285)
                      -.|.+||=..|+.| |+.+...=......|+.++.+..++..+.+.+...+.+...+..+-......        ...+.
T Consensus       101 ~~g~~vLD~CAaPG-gKt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~--------~~~~~  171 (284)
T d1sqga2         101 QNGEHILDLCAAPG-GKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW--------CGEQQ  171 (284)
T ss_dssp             CTTCEEEEESCTTC-HHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH--------HTTCC
T ss_pred             cccceeEeccCccc-cchhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchh--------ccccc
Confidence            36788888888877 7765443222335799999999999999988877666654444443322111        11246


Q ss_pred             ccEEEECCCCCCCCCC---CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEccc
Q 040531           93 LDILFNNAGVLGNQSK---HKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASV  156 (285)
Q Consensus        93 id~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~  156 (285)
                      +|.|+.-|--.+.+..   +......+.++..    -...-...++.++++.++  .+|++|+.++.
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~----~l~~lQ~~iL~~a~~~lk--~gG~lvYsTCS  232 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIP----ELAQLQSEILDAIWPHLK--TGGTLVYATCS  232 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHH----HHHHHHHHHHHHHGGGEE--EEEEEEEEESC
T ss_pred             ccEEEEeccccccCccccccchhhccccchhh----HHHHHHHHHHHHHHHhcC--CCceEEEeeec
Confidence            8988887755433211   0111112222222    223335556777777663  46888877664

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.50  E-value=0.26  Score=38.52  Aligned_cols=33  Identities=21%  Similarity=0.267  Sum_probs=27.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .|+|+||+ --|...|.+|+++|++|.++.+++.
T Consensus         2 ~V~IIGaG-~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           2 NVAVVGGG-ISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CEEEECCB-HHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             eEEEECCC-HHHHHHHHHHHhCCCCEEEEecCCC
Confidence            47889884 4599999999999999999987543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.40  E-value=0.56  Score=37.67  Aligned_cols=32  Identities=25%  Similarity=0.351  Sum_probs=24.2

Q ss_pred             cEEEEecCCCchhH-----HHHHHHHHCCCeEEEEecC
Q 040531           16 KIAIVTGGARGIGE-----ATVRLFVKHGAKVVIADID   48 (285)
Q Consensus        16 k~vlItGas~gIG~-----~ia~~la~~g~~v~~~~r~   48 (285)
                      |.+||++|++| |.     +++++|.++|++|.+++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56677766555 65     6999999999999887644

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=84.18  E-value=0.45  Score=36.30  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=53.4

Q ss_pred             cccccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHH
Q 040531            8 KAYKTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTI   87 (285)
Q Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~   87 (285)
                      .....++++.||=.|++.|.   +++.|++.|.+|+.++-+++..+.+.+..   ...+.++..|+.+..          
T Consensus        14 ~~~~~~~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~~~~----------   77 (225)
T d2p7ia1          14 AFTPFFRPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL---KDGITYIHSRFEDAQ----------   77 (225)
T ss_dssp             HHGGGCCSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS---CSCEEEEESCGGGCC----------
T ss_pred             HhhhhCCCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc---ccccccccccccccc----------
Confidence            33445788999999888763   45678888999999999888776655443   345788888875421          


Q ss_pred             HHcCCccEEEECC
Q 040531           88 SKHGRLDILFNNA  100 (285)
Q Consensus        88 ~~~~~id~lv~~a  100 (285)
                       ..+++|+|++..
T Consensus        78 -~~~~fD~I~~~~   89 (225)
T d2p7ia1          78 -LPRRYDNIVLTH   89 (225)
T ss_dssp             -CSSCEEEEEEES
T ss_pred             -cccccccccccc
Confidence             124789888753

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.95  E-value=0.4  Score=36.89  Aligned_cols=35  Identities=29%  Similarity=0.367  Sum_probs=28.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhH
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGI   53 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~   53 (285)
                      |+|.||+- -|..+|..|+++|.+|+++.+++....
T Consensus         5 ViIIGaG~-aGl~aA~~la~~G~~V~liEk~~~~g~   39 (251)
T d2i0za1           5 VIVIGGGP-SGLMAAIGAAEEGANVLLLDKGNKLGR   39 (251)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             EEEECcCH-HHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence            67787764 588999999999999999998765443

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.91  E-value=2  Score=31.53  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      +|.+  +..|+-|-|-+ .+.+++.+.+|+.+||+++......+ .  ...++.+++.++++.+..   +...  ..+.+
T Consensus        18 ~g~~--~vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~~---l~~~--~~~~v   86 (182)
T d1wg8a2          18 PGGV--YVDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKRH---LAAL--GVERV   86 (182)
T ss_dssp             TTCE--EEETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHHH---HHHT--TCSCE
T ss_pred             CCCE--EEEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHHH---HHHc--CCCcc
Confidence            4444  34444444444 45566677899999999988765543 2  246799999999875443   2211  13579


Q ss_pred             cEEEECCCCC
Q 040531           94 DILFNNAGVL  103 (285)
Q Consensus        94 d~lv~~ag~~  103 (285)
                      |.++..-|+.
T Consensus        87 dgIl~DLGvS   96 (182)
T d1wg8a2          87 DGILADLGVS   96 (182)
T ss_dssp             EEEEEECSCC
T ss_pred             CEEEEEccCC
Confidence            9999998874

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.82  E-value=0.46  Score=37.47  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=28.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCchh
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAA   51 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~   51 (285)
                      .|+|.||+ -.|..+|..|++.|.+|.++.++++.
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~~   37 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTPD   37 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            36888887 56999999999999999999987643

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=83.76  E-value=1.5  Score=34.62  Aligned_cols=76  Identities=12%  Similarity=0.032  Sum_probs=55.8

Q ss_pred             cEEEEec-CCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCC-ceEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 040531           16 KIAIVTG-GARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSP-LVTYLHCDVSLEQDIQNLINVTISKHGRL   93 (285)
Q Consensus        16 k~vlItG-as~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~s~~~~i~~~~~~i~~~~~~i   93 (285)
                      ..+|=.| |||.||.+++..+  ....|+.+|.++..++.+.+.+...+. ++.+++.|+.+.-           ...++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~-----------~~~~f  176 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-----------AGQQF  176 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-----------TTCCE
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc-----------CCCce
Confidence            3455555 6677888877765  457899999999998888877765443 5999999986431           12479


Q ss_pred             cEEEECCCCCC
Q 040531           94 DILFNNAGVLG  104 (285)
Q Consensus        94 d~lv~~ag~~~  104 (285)
                      |++|.|.-+..
T Consensus       177 DlIvsNPPYi~  187 (274)
T d2b3ta1         177 AMIVSNPPYID  187 (274)
T ss_dssp             EEEEECCCCBC
T ss_pred             eEEEecchhhh
Confidence            99999987753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.35  E-value=0.55  Score=37.24  Aligned_cols=35  Identities=23%  Similarity=0.360  Sum_probs=27.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDD   49 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~   49 (285)
                      +.+.|+|+||+=. |+.+|.+|++.|++|.++-.+.
T Consensus         4 ~~~kViVIGaG~a-GL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGSGVS-GLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECCBHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECCCHH-HHHHHHHHHhCCCCEEEEeCCC
Confidence            3456888888755 8999999999999999986543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.33  E-value=1.4  Score=29.61  Aligned_cols=35  Identities=14%  Similarity=0.180  Sum_probs=26.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC---CCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKH---GAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~---g~~v~~~~r~~~   50 (285)
                      .+.++|.|| |.+|.++|..|.+.   |.+|.++.+.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            578888887 88999999776654   457988887544

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.15  E-value=2.9  Score=31.29  Aligned_cols=88  Identities=15%  Similarity=0.064  Sum_probs=56.1

Q ss_pred             CCCcEEEEecCCCchhH-----HHHHHHHHC----CCeEEEEecCchhhHHHHHHhhcC--------------CCceEEE
Q 040531           13 LEGKIAIVTGGARGIGE-----ATVRLFVKH----GAKVVIADIDDAAGIALADSLLSS--------------SPLVTYL   69 (285)
Q Consensus        13 l~~k~vlItGas~gIG~-----~ia~~la~~----g~~v~~~~r~~~~~~~~~~~~~~~--------------~~~v~~~   69 (285)
                      ...-+++|.||+|.+.+     ++-..+...    +..++.++|++-..++..+.+.+.              ..++.++
T Consensus        18 ~~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~   97 (203)
T d1qkia1          18 SDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYV   97 (203)
T ss_dssp             SCCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECC
T ss_pred             CCCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccc
Confidence            35668999999999876     333333321    356888998766555554444321              1368889


Q ss_pred             eccCCCHHHHHHHHHHHHHHcC--CccEEEECC
Q 040531           70 HCDVSLEQDIQNLINVTISKHG--RLDILFNNA  100 (285)
Q Consensus        70 ~~D~s~~~~i~~~~~~i~~~~~--~id~lv~~a  100 (285)
                      .+|+++.++..++-+.+.+...  .-..+++.|
T Consensus        98 ~~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          98 AGQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             BCCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             cCcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            9999999998888766554321  234555543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.11  E-value=1.8  Score=34.87  Aligned_cols=75  Identities=21%  Similarity=0.241  Sum_probs=51.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhcC--CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLSS--SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      .++|++||-.|+++|+   ++..+++.|+ .|+.++.++ ....+.+...+.  ..++.++..|+.+.+          -
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~  101 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------L  101 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------C
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------C
Confidence            3689999999998874   4566778887 588888664 444444444333  456899999987632          1


Q ss_pred             HcCCccEEEECC
Q 040531           89 KHGRLDILFNNA  100 (285)
Q Consensus        89 ~~~~id~lv~~a  100 (285)
                      ...++|+++...
T Consensus       102 ~~~~~D~i~se~  113 (328)
T d1g6q1_         102 PFPKVDIIISEW  113 (328)
T ss_dssp             SSSCEEEEEECC
T ss_pred             cccceeEEEEEe
Confidence            124799998864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.80  E-value=0.52  Score=36.50  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=30.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHH
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIAL   55 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~   55 (285)
                      ++|.||+.. |...|..++++|.+|+++.+++....+.
T Consensus         7 ViIIGaG~a-Gl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           7 NIIIGAGAA-GLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             EEEECcCHH-HHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            677777644 8899999999999999999987765544

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.80  E-value=2.1  Score=29.51  Aligned_cols=86  Identities=13%  Similarity=0.123  Sum_probs=53.9

Q ss_pred             cCCCcEEEEecCC---CchhHHHHHHHHHCC-CeEEEEecCchhh--HHHHHHhhcCC--CceEEEeccCCCHHHHHHHH
Q 040531           12 TLEGKIAIVTGGA---RGIGEATVRLFVKHG-AKVVIADIDDAAG--IALADSLLSSS--PLVTYLHCDVSLEQDIQNLI   83 (285)
Q Consensus        12 ~l~~k~vlItGas---~gIG~~ia~~la~~g-~~v~~~~r~~~~~--~~~~~~~~~~~--~~v~~~~~D~s~~~~i~~~~   83 (285)
                      -|+-|.+.|+|||   +..|..+.+.|.+.| ..|+.+..+.+..  .....++.+..  .++.++.   ...+.+.+++
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~---vp~~~~~~~~   81 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIV---VPKRFVKDTL   81 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEEC---SCHHHHHHHH
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEe---cChHHhHHHH
Confidence            4788999999999   888999999887665 5788876554322  12223333322  2333332   3467788888


Q ss_pred             HHHHHHcCCcc-EEEECCCC
Q 040531           84 NVTISKHGRLD-ILFNNAGV  102 (285)
Q Consensus        84 ~~i~~~~~~id-~lv~~ag~  102 (285)
                      ++..+.  .+. +++..+|+
T Consensus        82 ~~~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          82 IQCGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHHHH--TCCEEEECCCSS
T ss_pred             HHHHHc--CCCEEEEecccc
Confidence            887776  344 44554454

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.43  E-value=0.62  Score=31.87  Aligned_cols=35  Identities=23%  Similarity=0.225  Sum_probs=29.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            467777765 68899999999999999999987643

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.32  E-value=0.5  Score=35.90  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=26.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCch
Q 040531           17 IAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDA   50 (285)
Q Consensus        17 ~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~   50 (285)
                      .|+|+||+-. |..+|.+|+++|. +|.++.+++.
T Consensus         2 ~V~IIGaG~a-GL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVGAGMS-GISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEECCBHH-HHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEECCcHH-HHHHHHHHHhCCCCcEEEEECCCC
Confidence            3788887655 8999999999996 6999887543

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.25  E-value=0.61  Score=35.32  Aligned_cols=35  Identities=26%  Similarity=0.361  Sum_probs=29.6

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHHCCCeEEEEecCch
Q 040531           16 KIAIVTGGARGIGEA-----TVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        16 k~vlItGas~gIG~~-----ia~~la~~g~~v~~~~r~~~   50 (285)
                      |++.|+++-||.|+.     +|..|+++|.+|.++|-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            789999999999975     57789999999999986643

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.04  E-value=1.2  Score=30.83  Aligned_cols=38  Identities=29%  Similarity=0.358  Sum_probs=31.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           12 TLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        12 ~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      -++||.|+|.|++ .-+..-|..|++...+|.++.|+++
T Consensus        31 ~frgk~V~VvGgG-dsA~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          31 IFRNKPLAVIGGG-DSAMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             GGTTSEEEEECCS-HHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             HhCCCEEEEEcCc-hHHHHHHHHHhCCCCcEEEEEeccc
Confidence            5799999999984 4477778888888888999988643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.91  E-value=1.6  Score=29.40  Aligned_cols=35  Identities=14%  Similarity=0.124  Sum_probs=29.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            467777775 67899999999999999999998654

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.85  E-value=0.68  Score=34.94  Aligned_cols=39  Identities=15%  Similarity=0.176  Sum_probs=32.9

Q ss_pred             ccCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           11 KTLEGKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .+++||.|+|.|++.. |..+|.++++.++.++.+.|+..
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhccccccccccc
Confidence            4689999999998764 89999999999999888877543

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=81.84  E-value=4.8  Score=26.85  Aligned_cols=80  Identities=16%  Similarity=0.113  Sum_probs=54.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccE
Q 040531           16 KIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDI   95 (285)
Q Consensus        16 k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~   95 (285)
                      |++||.--..-+-..+...|.+.|++|..+..-.+.    .+.+.+....+..+...+-+.+..+ ++.++.+....+.+
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a----l~~l~~~~~dlillD~~mp~~~G~~-~~~~~r~~~~~~~i   77 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITASDGEEA----LKKAETEKPDLIVLDVMLPKLDGIE-VCKQLRQQKLMFPI   77 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHH----HHHHHHHCCSEEEEESSCSSSCHHH-HHHHHHHTTCCCCE
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHH----HHHHhcccccEEEecccccCCCCch-hhhhhhccCCCCEE
Confidence            679999999999999999999999998876643333    3333334566766666666655543 45566666555666


Q ss_pred             EEECC
Q 040531           96 LFNNA  100 (285)
Q Consensus        96 lv~~a  100 (285)
                      ++..+
T Consensus        78 i~lt~   82 (121)
T d1mvoa_          78 LMLTA   82 (121)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            66543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=81.72  E-value=0.69  Score=36.66  Aligned_cols=31  Identities=16%  Similarity=0.324  Sum_probs=25.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 040531           18 AIVTGGARGIGEATVRLFVKHGA-KVVIADIDD   49 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~   49 (285)
                      |+|.||+ -+|.++|.+|+++|. +|.+++++.
T Consensus         4 ViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGAG-IVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6777764 789999999999996 699998864

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=81.62  E-value=4.4  Score=29.57  Aligned_cols=57  Identities=11%  Similarity=0.147  Sum_probs=29.6

Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhcCCCCceEEEEcccc
Q 040531           85 VTISKHGRLDILFNNAGVLGNQSKHKSITDFDANEFDNIIRINVRGAALGMKYAAKVMVPRRSGCIISTASVA  157 (285)
Q Consensus        85 ~i~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ii~vss~~  157 (285)
                      .+.....+.|+||...|....    ......+.+.+.+.           ++.++..+++ ....+++++...
T Consensus        64 ~~~~~~~~~D~vvi~~G~ND~----~~~~~~~~~~~~~~-----------l~~li~~~~~-~~~~~vl~~~~~  120 (208)
T d2o14a2          64 AILKYIKPGDYFMLQLGINDT----NPKHKESEAEFKEV-----------MRDMIRQVKA-KGADVILSTPQG  120 (208)
T ss_dssp             HHHTTCCTTCEEEEECCTGGG----CGGGCCCHHHHHHH-----------HHHHHHHHHT-TTCEEEEECCCC
T ss_pred             HHHHhcCCCCEEEEEcCCCcc----cccccccHHHHHHH-----------HHHHHHHHHh-cCCceeeccccc
Confidence            344445567999998887532    12223455555443           2333333333 345677676543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=81.18  E-value=3.1  Score=30.30  Aligned_cols=77  Identities=13%  Similarity=0.152  Sum_probs=51.6

Q ss_pred             cCCCcEEEEec-CCCchhHHHHHHHHHCCCe-EEEEecCchhhHHHHHHhhcC-CCceEEEeccCCCHHHHHHHHHHHHH
Q 040531           12 TLEGKIAIVTG-GARGIGEATVRLFVKHGAK-VVIADIDDAAGIALADSLLSS-SPLVTYLHCDVSLEQDIQNLINVTIS   88 (285)
Q Consensus        12 ~l~~k~vlItG-as~gIG~~ia~~la~~g~~-v~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~s~~~~i~~~~~~i~~   88 (285)
                      ++.++++|=.+ |+|.+|.+    .+++|+. |++++.+....+.+.+.+... ..++.++..|+.         +.+..
T Consensus        41 ~~~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HHTTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSS
T ss_pred             ccchhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccc
Confidence            36788888444 55555554    4567874 999999999988888777543 345777877742         22333


Q ss_pred             HcCCccEEEECCC
Q 040531           89 KHGRLDILFNNAG  101 (285)
Q Consensus        89 ~~~~id~lv~~ag  101 (285)
                      .....|+++...-
T Consensus       108 ~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 KGTPHNIVFVDPP  120 (183)
T ss_dssp             CCCCEEEEEECCS
T ss_pred             cccccCEEEEcCc
Confidence            3457899999743

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.04  E-value=0.6  Score=36.54  Aligned_cols=34  Identities=21%  Similarity=0.384  Sum_probs=28.2

Q ss_pred             cEEEEecCCCchhHHH-----HHHHHHCCCeEEEEecCch
Q 040531           16 KIAIVTGGARGIGEAT-----VRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        16 k~vlItGas~gIG~~i-----a~~la~~g~~v~~~~r~~~   50 (285)
                      |++.|+| -||+|+..     |..|+++|.+|.++|-+.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5788898 88999865     5599999999999998754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=80.95  E-value=0.63  Score=36.38  Aligned_cols=32  Identities=31%  Similarity=0.448  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      |+|.|| |-.|..+|.+|+++|.+|+++++...
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            567765 56699999999999999999987543

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=80.65  E-value=5.8  Score=28.74  Aligned_cols=65  Identities=18%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             HHHCCCeEEEEecCchhhHHHHHHhhcCCCceEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 040531           35 FVKHGAKVVIADIDDAAGIALADSLLSSSPLVTYLHCDVSLEQDIQNLINVTISKHGRLDILFNNAGV  102 (285)
Q Consensus        35 la~~g~~v~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~s~~~~i~~~~~~i~~~~~~id~lv~~ag~  102 (285)
                      ....|-++++++.+....+.+.+.+.+.+-+...+..++++ .+-.+.++.+.+  |.+++||...-.
T Consensus        27 ~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~-~eR~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          27 RAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDA-FKRQALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCH-HHHHHHHHHHHT--TSCSEEEESCCC
T ss_pred             HHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccch-HHHHHHHHHHHC--CCeEEEEeeeee
Confidence            34568899999999999999999999889999999999975 444455554543  689999987543

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.38  E-value=12  Score=29.72  Aligned_cols=77  Identities=10%  Similarity=0.069  Sum_probs=47.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCchhhHHHHHHhhc----------CCCceEEEeccCCCHHHHHHH
Q 040531           14 EGKIAIVTGGARGIGEATVRLFVKHGA-KVVIADIDDAAGIALADSLLS----------SSPLVTYLHCDVSLEQDIQNL   82 (285)
Q Consensus        14 ~~k~vlItGas~gIG~~ia~~la~~g~-~v~~~~r~~~~~~~~~~~~~~----------~~~~v~~~~~D~s~~~~i~~~   82 (285)
                      .+.+++=.|.+.|  ..+.......|+ .++.++.++...+.+.+.+.+          ...++.+++.|+.+.+--+..
T Consensus       151 ~~~~vlD~GcG~G--~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~~~~~~  228 (328)
T d1nw3a_         151 DDDLFVDLGSGVG--QVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI  228 (328)
T ss_dssp             TTCEEEEETCTTS--HHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEcCCCCC--HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccccccccccc
Confidence            3677777775544  333322234465 599999888776554443322          346799999999886543333


Q ss_pred             HHHHHHHcCCccEEEECC
Q 040531           83 INVTISKHGRLDILFNNA  100 (285)
Q Consensus        83 ~~~i~~~~~~id~lv~~a  100 (285)
                      .        ..|+++.|.
T Consensus       229 ~--------~advi~~~~  238 (328)
T d1nw3a_         229 A--------NTSVIFVNN  238 (328)
T ss_dssp             H--------HCSEEEECC
T ss_pred             C--------cceEEEEcc
Confidence            2        367777653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.35  E-value=0.78  Score=30.91  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=28.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           15 GKIAIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        15 ~k~vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      .|.++|.| +|-+|.++|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            36666665 578999999999999999999987654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.19  E-value=0.72  Score=34.79  Aligned_cols=32  Identities=13%  Similarity=0.219  Sum_probs=27.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCch
Q 040531           18 AIVTGGARGIGEATVRLFVKHGAKVVIADIDDA   50 (285)
Q Consensus        18 vlItGas~gIG~~ia~~la~~g~~v~~~~r~~~   50 (285)
                      ++|.||+.. |...|.++++.|.+|++++++..
T Consensus         8 viVIG~GpA-Gl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGGGPA-GYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCcEEEEEecCC
Confidence            678888665 99999999999999999987644

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.15  E-value=1.5  Score=31.29  Aligned_cols=35  Identities=23%  Similarity=0.282  Sum_probs=25.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCc
Q 040531           13 LEGKIAIVTGGARGIGEATVRLFVKHGAK-VVIADIDD   49 (285)
Q Consensus        13 l~~k~vlItGas~gIG~~ia~~la~~g~~-v~~~~r~~   49 (285)
                      +.+| |+|. |+|..|..+|..+.+.|+. |+++.|+.
T Consensus        44 ~~~k-VvVI-GGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGA-VIVL-GAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSE-EEEE-CSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCE-EEEE-CCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4454 5555 4567789999999999976 77777754