Citrus Sinensis ID: 040594

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
YQASKNDLTVYSALSKPPSSEYVNVSRWYNYIDALLRISGVSAEGSGVIVEGSAPIATLPVDDIKASSTAAADDDNDDVYLFGEKTEEEKKAAEERSTAIKTSAKKEEFGKSLVLLDIKPWDDETDIQKLDEAVRGIKMEGQCRSTEVNAGQQRPVPFQRKSGEFLRRSGEVLVKFRCISGAKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKICIIQESLMTDAGEVSGGSFWLAGHCKVTTILFFVPQPLLLLLNLFLESGVS
ccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHcccccccccEEEccccCEEEEEEEEEcEEEEEEEEcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccCEEECcccCEEEEEEECcHHHHHHHHHHHHcccc
YQASKNDLTVYSALSKPPSSEYVNVSRWYNYIDALLRIS****************************************YLF****************************KSLVLLDIKPWDDETDIQKLDEAVRGIKMEGQCRSTEVNAGQQRPVPFQRKSGEFLRRSGEVLVKFRCISGAKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKICIIQESLMTDAGEVSGGSFWLAGHCKVTTILFFVPQPLLLLLNLFLESG**
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YQASKNDLTVYSALSKPPSSEYVNVSRWYNYIDALLRISGVSAEGSGVIVEGSAPIATLPVDDIKASSTAAADDDNDDVYLFGEKTEEEKKAAEERSTAIKTSAKKEEFGKSLVLLDIKPWDDETDIQKLDEAVRGIKMEGQCRSTEVNAGQQRPVPFQRKSGEFLRRSGEVLVKFRCISGAKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKICIIQESLMTDAGEVSGGSFWLAGHCKVTTILFFVPQPLLLLLNLFLESGVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Elongation factor 1-delta 2 EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP.probableQ9SI20
Elongation factor 1-delta 1 EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP.probableQ40680

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1F60, chain B
Confidence level:very confident
Coverage over the Query: 108-144,180-235
View the alignment between query and template
View the model in PyMOL
Template: 3IC8, chain A
Confidence level:probable
Coverage over the Query: 2-36
View the alignment between query and template
View the model in PyMOL