Citrus Sinensis ID: 040647

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVAGSSRGSDMAGSSSGGRDGSLSNQDQDGDCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEcccccccccccccccccccccccccccccEEEEEEccHHHHHcHHccccHcHHHHHHHHHHHHHHHHHHccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEcHEEEccc
Coil and Loop (DISEMBL)
rpennpldlnnlpedyskqvldessstgagaghrkkksgakdgkddecgkvyecrfcslkfcksqalgghmnrhrqERETETLNKARQLVFQHndnlavqgppphlgchpmtpgsyhpaghigdpfrsiypprlystgssstlisppppppqppqypypsstslascpshqypphqpmnelyvghvlsssphsqyphnqsnlnnfmdssytcigapvghgfvagssrgsdmagsssggrdgslsnqdqdgdcCSFIFELMYTlsyfgfkpfgiddysigatyynql
Flexible Loop (DISEMBL)
rpennpldlnnlpedySKQVLDessstgagaghrkkksgakdgkddecGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVAGSSRGSDMAGSSSGGRDGSLSNQDQDGDCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQL
Low Complexity Region (SEG)
RpennpldlnnlpedYSKQVLDESSSTGAGAGHRkkksgakdgkddECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIYPPRlystgssstlisppppppqppqypypsstslASCPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVagssrgsdmagsssggrdgsLSNQDQDGDCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQL
Disordered region (IsUnstruct)
***********************************************CGKVYECRFCSLKFCKSQAL**********************VF******************************I***FR*IY**************************************************************************FMDSSYTCIGAPVGHGFV****************************DCCSFIFELMYTLSYFGFKPFGIDDYSIGATYY***
Disordered Region (DISOPRED)
****NPL*********************************************ECRFCSLKFCKSQALGGHM*R**************************QGPPPHLGCHPMTPGSY***********************************************************************************************CIGA***********************************DCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQ*
Disordered Region (DISEMBL)
RPENNPLDLNNLPEDYSKQV*************************DECGKVYECRFCSLKFCKSQAL*************ETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIYPPRLYST*******************************SHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVAGS*********************DQDGDCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQL
Disordered Region (DISPRO)
*****PLDLNNLPEDYSKQVLD**************************GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVA**************************GDCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVAGSSRGSDMAGSSSGGRDGSLSNQDQDGDCCSFIFELMYTLSYFGFKPFGIDDYSIGATYYNQL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q6S591	253	Zinc finger protein JAGGE	yes	no	0.783	0.885	0.463	1e-36
Q9LG97	263	Zinc finger protein STAME	yes	no	0.349	0.380	0.647	5e-28
Q6S592	207	Zinc finger protein JAGGE	no	no	0.643	0.888	0.406	2e-26
Q39265	197	Zinc finger protein 6 OS=	no	no	0.346	0.502	0.297	1e-05

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score =  153 bits (387), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/261 (46%), Positives = 148/261 (56%), Gaps = 37/261 (14%)

Query: 1   RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLK 60
           R E N LDLNNLP+D+SK    ++   G+ +G RKKK G+K+GKD E GKVYECRFCSLK
Sbjct: 2   RHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKK-GSKEGKD-ESGKVYECRFCSLK 59

Query: 61  FCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAG 120
           FCKSQALGGHMNRHRQERETETLN+ARQLV++ ND +   G         ++P  YH   
Sbjct: 60  FCKSQALGGHMNRHRQERETETLNQARQLVYR-NDTITPPG---------ISPFGYH--- 106

Query: 121 HIGDP--FRSIY-PPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQP 177
           H  DP  +RS+Y  P +Y   SS+ L+  PP PP PP YPY S+         QY PH  
Sbjct: 107 HTTDPTIYRSVYSSPMIYPGSSSTNLVPQPPMPPPPPPYPYSSN---------QYSPHNH 157

Query: 178 MNELYVGHVL----SSSPHSQYPHNQSNLNNFMDS----SYTCIGAPVG-HGFVAGSSRG 228
            N+ Y+        S SP    P   + ++   DS     YTC+GAP+G  GF       
Sbjct: 158 FNDYYLNPSFRGSRSISPSPNLP-TTTTVDYMADSPVEPGYTCVGAPIGPTGFPIRGPSI 216

Query: 229 SDMAGSSSGGRDGSLSNQDQD 249
                    GRDG  S Q  D
Sbjct: 217 VRAPLEPPQGRDGDASRQRLD 237

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LG97|SL1_ORYSJ Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=1

 Score =  125 bits (313), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 2/102 (1%)

Query: 1   RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAK-DGKDDECGKVYECRFCSL 59
           R E +PLDLNNLP+++ KQ ++ S++T A +    + +  K +G  DE GKVYECRFCSL
Sbjct: 6   RQEGSPLDLNNLPDEFGKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECRFCSL 65

Query: 60  KFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQG 101
           KFCKSQALGGHMNRHRQERETETLN+ARQLVF  ND+LA  G
Sbjct: 66  KFCKSQALGGHMNRHRQERETETLNRARQLVFG-NDSLAAVG 106

Regulates floral organ identity and cell proliferation in the inner floral whorls. Probably specifies the identities of lodicule and stamen through positive regulation of MADS16 expression. May contribute to morphogenesis by suppressing OSH1 expression in the lateral organs.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6S592|JGL_ARATH Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 120/224 (53%), Gaps = 40/224 (17%)

Query: 3   ENNPLDLNNLPEDYSKQVL--DESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLK 60
           ENN LDLNNLP+D S+ +    E   + + +    ++   KDGK+      YECRFCSLK
Sbjct: 5   ENNTLDLNNLPDDPSRDIFPFFEEGFSSSSSSGGFREKQTKDGKE------YECRFCSLK 58

Query: 61  FCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAG 120
           F KSQALGGHMNRHRQERETE+LNKAR+LV +++     QGPP           SYH   
Sbjct: 59  FFKSQALGGHMNRHRQERETESLNKARELVLRNDSFPPHQGPPSF---------SYHQGD 109

Query: 121 -HIGDPFR---SIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQ 176
            HIGD  +    +YPPR +S   SS+++   PP      Y YP  +S             
Sbjct: 110 VHIGDLTQFKPMMYPPRHFSLPGSSSILQLQPP------YLYPPLSSPF----------- 152

Query: 177 PMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHG 220
           P +   +G+  + + H    ++        DSSYT IGAPV +G
Sbjct: 153 PQHNTNIGN--NGTRHQTLTNSVCGGRALPDSSYTFIGAPVANG 194

Acts with JAG to promote growth and patterning in stamens and carpels. Promotes the growth of the abaxial and adaxial sides of floral organs. Promotes the growth of the pollen-bearing microsporangia in anthers, the carpel walls of the gynoecium and the establishment of the correct number of cell layers in carpel walls. Promotes leaf blade growth and trichome development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 42/141 (29%)

Query: 11  NLPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGH 70
           NL E  S Q        G+G+G   +K              YEC++C  +F  SQALGGH
Sbjct: 14  NLLETTSVQNQSSEPRPGSGSGSESRK--------------YECQYCCREFANSQALGGH 59

Query: 71  MNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDPFRSIY 130
            N H++ER+          + +    LA +G P H   HP T           +P  S +
Sbjct: 60  QNAHKKERQ----------LLKRAQMLATRGLPRHHNFHPHT-----------NPLLSAF 98

Query: 131 PPRLYSTGSSSTLISPPPPPP 151
            P  +       L+S P PPP
Sbjct: 99  APLPH-------LLSQPHPPP 112

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
224111680	285	predicted protein [Populus trichocarpa]	0.800	0.803	0.630	2e-64
359472690	283	PREDICTED: zinc finger protein JAGGED-li	0.709	0.717	0.634	9e-58
449445254	518	PREDICTED: uncharacterized protein LOC10	0.737	0.407	0.571	4e-53
297737812	310	unnamed protein product [Vitis vinifera]	0.646	0.596	0.616	7e-52
449502480	313	PREDICTED: zinc finger protein JAGGED-li	0.737	0.674	0.558	3e-44
186970563	259	lyrate [Solanum lycopersicum]	0.681	0.752	0.501	9e-41
297841571	253	hypothetical protein ARALYDRAFT_475967 [	0.783	0.885	0.478	2e-36
79375919	253	zinc finger-related protein [Arabidopsis	0.783	0.885	0.463	8e-35
75334976	263	RecName: Full=Zinc finger protein STAMEN	0.349	0.380	0.647	3e-26
255581631	185	nucleic acid binding protein, putative [	0.458	0.708	0.531	1e-24

>gi|224111680|ref|XP_002315939.1| predicted protein [Populus trichocarpa] gi|222864979|gb|EEF02110.1| predicted protein [Populus trichocarpa]

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/257 (63%), Positives = 192/257 (74%), Gaps = 28/257 (10%)

Query: 1   RPENNPLDLNNLPEDYS---KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFC 57
           R ENNPLDLNNLPEDYS   KQVLDE SS+G    +RKKKSGAK+GK+ E  KVYECRFC
Sbjct: 18  RHENNPLDLNNLPEDYSRDGKQVLDEGSSSG----YRKKKSGAKNGKE-EGDKVYECRFC 72

Query: 58  SLKFCKSQALGGHMNRHRQ-ERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSY 116
           SLKFCKSQALGGHMNRHRQ +RETETLN+ARQLVF ++D LA   P  H GCHPM  GSY
Sbjct: 73  SLKFCKSQALGGHMNRHRQGKRETETLNRARQLVF-NSDTLAA--PGGHPGCHPMGTGSY 129

Query: 117 HPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQ-YPYPSSTSLASCPSHQYPPH 175
            PAG+IGDPFRS+YPPRL+  GSSSTL+ P PP   P Q Y Y   + L +  S QY P 
Sbjct: 130 IPAGNIGDPFRSVYPPRLF-PGSSSTLL-PAPPNQHPHQSYLYTPPSRLPAYKS-QY-PQ 185

Query: 176 QPMNELYVGHVLSSSPHSQYPHNQSNLNNFM---DSSYTCIGAPVGH-GFVAGSSRGSDM 231
           QP+N+ Y+GHVL+++  + YP +Q N+N  M   +S+YTCIGAPVGH GF  GSSR ++ 
Sbjct: 186 QPINDYYIGHVLNNTSQT-YPSHQ-NMNYNMGGSESNYTCIGAPVGHGGFGPGSSRSTEG 243

Query: 232 AGSSSGGRDGSLSNQDQ 248
           +     GRDGSLSNQ++
Sbjct: 244 S-----GRDGSLSNQEE 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472690|ref|XP_003631186.1| PREDICTED: zinc finger protein JAGGED-like [Vitis vinifera]

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 144/227 (63%), Positives = 164/227 (72%), Gaps = 24/227 (10%)

Query: 1   RPENNPLDLNNLPEDYS---KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFC 57
           RPE NPLDLNNLPED++   KQV ++SSS+GA      KK        DECGKVYECRFC
Sbjct: 30  RPERNPLDLNNLPEDFTRDGKQVFEDSSSSGA------KKKSGGKDGKDECGKVYECRFC 83

Query: 58  SLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYH 117
           SLKFCKSQALGGHMNRHRQERETETLN+ARQ+VF  N+NLA QG  PHLG  P+ PGS+H
Sbjct: 84  SLKFCKSQALGGHMNRHRQERETETLNRARQIVFS-NENLAAQG-VPHLGGQPIAPGSFH 141

Query: 118 PAGHIGD---PFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPP 174
             G++GD   PFRS+YP R++S GSSSTL++PPP P     Y Y S + L S PS QYPP
Sbjct: 142 QTGNMGDPTLPFRSVYPTRMFS-GSSSTLLTPPPQP-----YLYASPSRLVSYPS-QYPP 194

Query: 175 HQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGF 221
              MN+ YVGHVLSS   SQY H   N     DS+YTCIGAPVGHGF
Sbjct: 195 PS-MNDYYVGHVLSSG--SQYSHPGLNYGGASDSNYTCIGAPVGHGF 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445254|ref|XP_004140388.1| PREDICTED: uncharacterized protein LOC101215991 [Cucumis sativus]

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/238 (57%), Positives = 157/238 (65%), Gaps = 27/238 (11%)

Query: 1   RPENNPLDLNNLPEDY---SKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFC 57
           R E +PLDLNNLPEDY    KQ++++SSS     GHRKKKSG K+GK+ E GKVYECRFC
Sbjct: 257 RSEGSPLDLNNLPEDYIRDGKQIIEDSSS-----GHRKKKSGLKEGKE-ESGKVYECRFC 310

Query: 58  SLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG-CHPMTPGSY 116
           SLKFCKSQALGGHMNRHRQERETETLN+ARQLVF  NDNLA Q PPPHLG CH M P +Y
Sbjct: 311 SLKFCKSQALGGHMNRHRQERETETLNRARQLVFS-NDNLAAQPPPPHLGCCHSMAPANY 369

Query: 117 HPAGHIGD-------PFRSIYPPRLYST---GSSSTLISPPPPPPQPPQYPYPSSTSLAS 166
           H AG  G+       P R  +P R++S    G+      PPP P     Y Y S T  +S
Sbjct: 370 HSAGGSGNVGSDSTLPLR--FPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSS 427

Query: 167 CPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSN--LNNFMDSSYTCIGAPVGHGFV 222
            PS+  PP   +N+ YVGHVL +   SQ  H   N   ++   SSYTCIGAPVGH  V
Sbjct: 428 FPSYYPPPQASINDYYVGHVLGNP--SQCSHQTVNYGSSSVESSSYTCIGAPVGHAAV 483

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737812|emb|CBI27013.3| unnamed protein product [Vitis vinifera]

 Score =  210 bits (534), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/206 (61%), Positives = 148/206 (71%), Gaps = 21/206 (10%)

Query: 1   RPENNPLDLNNLPEDYS---KQVLDESSSTGAGAGHR---KKKSGAKDGKDDECGKVYEC 54
           RPE NPLDLNNLPED++   KQV ++SSS+ A  G     +KK        DECGKVYEC
Sbjct: 66  RPERNPLDLNNLPEDFTRDGKQVFEDSSSSVALIGFVAGCRKKKSGGKDGKDECGKVYEC 125

Query: 55  RFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG 114
           RFCSLKFCKSQALGGHMNRHRQ +ETETLN+ARQ+VF  N+NLA QG  PHLG  P+ PG
Sbjct: 126 RFCSLKFCKSQALGGHMNRHRQGKETETLNRARQIVFS-NENLAAQG-VPHLGGQPIAPG 183

Query: 115 SYHPAGHIGD---PFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQ 171
           S+H  G++GD   PFRS+YP R++S GSSSTL++PPP P     Y Y S + L S PS Q
Sbjct: 184 SFHQTGNMGDPTLPFRSVYPTRMFS-GSSSTLLTPPPQP-----YLYASPSRLVSYPS-Q 236

Query: 172 YPPHQPMNELYVGHVLSSSPHSQYPH 197
           YPP   MN+ YVGHVLSS   SQY H
Sbjct: 237 YPPPS-MNDYYVGHVLSSG--SQYSH 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502480|ref|XP_004161652.1| PREDICTED: zinc finger protein JAGGED-like [Cucumis sativus]

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/238 (55%), Positives = 153/238 (64%), Gaps = 27/238 (11%)

Query: 1   RPENNPLDLNNLPEDY---SKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFC 57
           R E +PLDLNNLPEDY    KQ++++SSS        KKKSG K+GK+ E GKVYECRFC
Sbjct: 52  RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGKQ-----KKKSGLKEGKE-ESGKVYECRFC 105

Query: 58  SLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG-CHPMTPGSY 116
           SLKFCKSQALGGHMNRHRQERETETLN+ARQLVF  NDNLA Q PPPHLG CH M P +Y
Sbjct: 106 SLKFCKSQALGGHMNRHRQERETETLNRARQLVFS-NDNLAAQPPPPHLGCCHSMAPANY 164

Query: 117 HPAGHIGD-------PFRSIYPPRLYST---GSSSTLISPPPPPPQPPQYPYPSSTSLAS 166
           H AG  G+       P R  +P R++S    G+      PPP P     Y Y S T  +S
Sbjct: 165 HSAGGSGNVGSDSTLPLR--FPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSS 222

Query: 167 CPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLN--NFMDSSYTCIGAPVGHGFV 222
            PS+  PP   +N+ YVGHVL +   SQ  H   N    +   SSYTCIGAPVGH  V
Sbjct: 223 FPSYYPPPQASINDYYVGHVLGNP--SQCSHQTVNYGSSSVESSSYTCIGAPVGHAAV 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186970563|gb|ACC99356.1| lyrate [Solanum lycopersicum]

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 126/251 (50%), Positives = 149/251 (59%), Gaps = 56/251 (22%)

Query: 2   PENNPLDLNNLPEDY----SKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFC 57
           PE NPLDLNNLP +      KQVL+       G G+RKKK+G K+    +CGKVYECRFC
Sbjct: 3   PERNPLDLNNLPHEEFCRDGKQVLE-------GGGYRKKKNGGKE----DCGKVYECRFC 51

Query: 58  SLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPM-TPGSY 116
           SLKFCKSQALGGHMNRHRQERETETLN+ARQLVF +NDN+    PP HL C P+   G Y
Sbjct: 52  SLKFCKSQALGGHMNRHRQERETETLNRARQLVF-NNDNII---PPHHLSCPPIPHGGGY 107

Query: 117 HPAGHIGDP---FR-------SIYPPRLYSTGS-SSTLISPPPPPPQPPQYPYPSSTSLA 165
           H + +IGDP   +R       S+YP  L+S  S ++ L  PP  PP  P Y Y S   + 
Sbjct: 108 HQSTNIGDPTLSYRPPPPPPPSLYPTGLFSGNSTTTLLPPPPTQPPHQPSYMYASPPRMV 167

Query: 166 SCPSHQYPPHQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSS---------------- 209
           S  SHQYP     N+ ++GHVLS S      H+ S  NNFM SS                
Sbjct: 168 SFSSHQYPAQ--TNDYFLGHVLSESN----THSTSTTNNFMGSSALGPDHGSNNNNNNNN 221

Query: 210 ---YTCIGAPV 217
              YTCIGAP+
Sbjct: 222 SNNYTCIGAPI 232

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841571|ref|XP_002888667.1| hypothetical protein ARALYDRAFT_475967 [Arabidopsis lyrata subsp. lyrata] gi|297334508|gb|EFH64926.1| hypothetical protein ARALYDRAFT_475967 [Arabidopsis lyrata subsp. lyrata]

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 150/261 (57%), Gaps = 37/261 (14%)

Query: 1   RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLK 60
           R E N LDLNNLP+D SK    ++   G+ +G RKKK G+K+GKD E GKVYECRFCSLK
Sbjct: 2   RHEENYLDLNNLPDDISKDGNKQALEEGSSSGQRKKK-GSKEGKD-ESGKVYECRFCSLK 59

Query: 61  FCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAG 120
           FCKSQALGGHMNRHRQERETETLN+ARQLV++ ND L   G         ++P  YH   
Sbjct: 60  FCKSQALGGHMNRHRQERETETLNQARQLVYR-NDTLTPPG---------ISPFGYH--- 106

Query: 121 HIGDP--FRSIY-PPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQP 177
           H  DP  +RS+Y  P LY   SS+ L+  PP PP PP YPY          S+QY PH  
Sbjct: 107 HTTDPTIYRSVYSSPMLYPGSSSTNLVPQPPMPPPPPPYPY---------SSNQYSPHNH 157

Query: 178 MNELYVGHVL----SSSPHSQYPHNQSNLNNFMDS----SYTCIGAPVG-HGFVAGSSRG 228
            N+ Y+        S SP+   P   + ++   DS    SYTC+GAP+G  GF    S  
Sbjct: 158 FNDYYLNPSFRGSRSISPNPNLP-TTTTVDYMADSPVEPSYTCVGAPIGPTGFPIRGSSS 216

Query: 229 SDMAGSSSGGRDGSLSNQDQD 249
                    GRDG  S Q  D
Sbjct: 217 VRAPLEPPQGRDGDASRQRLD 237

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79375919|ref|NP_177015.3| zinc finger-related protein [Arabidopsis thaliana] gi|75324671|sp|Q6S591.1|JAG_ARATH RecName: Full=Zinc finger protein JAGGED gi|39726198|gb|AAR30036.1| JAGGED [Arabidopsis thaliana] gi|332196677|gb|AEE34798.1| zinc finger-related protein [Arabidopsis thaliana]

 Score =  153 bits (387), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/261 (46%), Positives = 148/261 (56%), Gaps = 37/261 (14%)

Query: 1   RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLK 60
           R E N LDLNNLP+D+SK    ++   G+ +G RKKK G+K+GKD E GKVYECRFCSLK
Sbjct: 2   RHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKK-GSKEGKD-ESGKVYECRFCSLK 59

Query: 61  FCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAG 120
           FCKSQALGGHMNRHRQERETETLN+ARQLV++ ND +   G         ++P  YH   
Sbjct: 60  FCKSQALGGHMNRHRQERETETLNQARQLVYR-NDTITPPG---------ISPFGYH--- 106

Query: 121 HIGDP--FRSIY-PPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPPHQP 177
           H  DP  +RS+Y  P +Y   SS+ L+  PP PP PP YPY S+         QY PH  
Sbjct: 107 HTTDPTIYRSVYSSPMIYPGSSSTNLVPQPPMPPPPPPYPYSSN---------QYSPHNH 157

Query: 178 MNELYVGHVL----SSSPHSQYPHNQSNLNNFMDS----SYTCIGAPVG-HGFVAGSSRG 228
            N+ Y+        S SP    P   + ++   DS     YTC+GAP+G  GF       
Sbjct: 158 FNDYYLNPSFRGSRSISPSPNLP-TTTTVDYMADSPVEPGYTCVGAPIGPTGFPIRGPSI 216

Query: 229 SDMAGSSSGGRDGSLSNQDQD 249
                    GRDG  S Q  D
Sbjct: 217 VRAPLEPPQGRDGDASRQRLD 237

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75334976|sp|Q9LG97.1|SL1_ORYSJ RecName: Full=Zinc finger protein STAMENLESS 1; AltName: Full=OsJAG; AltName: Full=Zinc finger protein OPEN BEAK gi|9558464|dbj|BAB03385.1| C2H2 zinc-finger transcription factor -like [Oryza sativa Japonica Group] gi|169135755|gb|ACA48519.1| stamenless 1 [Oryza sativa Japonica Group] gi|219687079|dbj|BAH09094.1| OPEN BEAK [Oryza sativa Japonica Group]

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 2/102 (1%)

Query: 1   RPENNPLDLNNLPEDYSKQVLDESSSTGAGAGHRKKKSGAK-DGKDDECGKVYECRFCSL 59
           R E +PLDLNNLP+++ KQ ++ S++T A +    + +  K +G  DE GKVYECRFCSL
Sbjct: 6   RQEGSPLDLNNLPDEFGKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECRFCSL 65

Query: 60  KFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQG 101
           KFCKSQALGGHMNRHRQERETETLN+ARQLVF  ND+LA  G
Sbjct: 66  KFCKSQALGGHMNRHRQERETETLNRARQLVFG-NDSLAAVG 106

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581631|ref|XP_002531619.1| nucleic acid binding protein, putative [Ricinus communis] gi|223528737|gb|EEF30747.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 97/143 (67%), Gaps = 12/143 (8%)

Query: 108 CHPMTPGSYHPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASC 167
           CHP+ PGSYHP  +I DP+RS+Y PRL++  SS+ L S PP PP  P Y Y S + + S 
Sbjct: 14  CHPIGPGSYHPTSNIVDPYRSVYQPRLFAGSSSTILQSAPPQPPHQP-YLYTSPSRVPSY 72

Query: 168 PSHQYPPHQPMNELYVGHVLSSSPHSQ-YPHNQSNLNNFMDSSYTCIGAPVGH-GFVAGS 225
           PS QY P QP+N+ Y+GHVL+SS  SQ YP + +  ++  +S+YTCIGAPVGH GF  GS
Sbjct: 73  PS-QY-PQQPINDYYIGHVLNSSSSSQAYPMSYNMGSSHQESNYTCIGAPVGHGGFGVGS 130

Query: 226 SRGSDMAGSSSGGRDGSLSNQDQ 248
           SRG          RDGSLSNQ++
Sbjct: 131 SRGGSE-------RDGSLSNQEE 146

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2201302	253	JAG "AT1G68480" [Arabidopsis t	0.332	0.375	0.534	3.7e-29
TAIR|locus:2009952	207	NUB "AT1G13400" [Arabidopsis t	0.265	0.367	0.640	2.5e-26
UNIPROTKB|Q9LG97	263	SL1 "Zinc finger protein STAME	0.297	0.323	0.609	6.4e-26
TAIR|locus:2143300	278	AT5G27880 "AT5G27880" [Arabido	0.374	0.384	0.336	3.6e-07
TAIR|locus:2175309	201	AT5G05120 "AT5G05120" [Arabido	0.125	0.179	0.583	3.9e-07
TAIR|locus:2158367	137	AT5G43540 "AT5G43540" [Arabido	0.195	0.408	0.437	5.8e-07
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.192	0.366	0.396	2.9e-06
TAIR|locus:2019723	197	ZFP6 "AT1G67030" [Arabidopsis	0.213	0.309	0.405	4.7e-06
TAIR|locus:2156529	173	LATE "LATE FLOWERING" [Arabido	0.276	0.456	0.352	0.00017
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.188	0.251	0.423	0.00044

TAIR|locus:2201302 JAG "AT1G68480" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 62/116 (53%), Positives = 73/116 (62%)

Query:    17 SKQVLDESSSTGAGAGHRXXXXXXXXXXXXECGKVYECRFCSLKFCKSQALGGHMNRHRQ 76
             +KQ L+E SS+G                  E GKVYECRFCSLKFCKSQALGGHMNRHRQ
Sbjct:    22 NKQALEEGSSSGQ------RKKKGSKEGKDESGKVYECRFCSLKFCKSQALGGHMNRHRQ 75

Query:    77 ERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIGDP--FRSIY 130
             ERETETLN+ARQLV++ ND +     PP +     +P  YH   H  DP  +RS+Y
Sbjct:    76 ERETETLNQARQLVYR-NDTIT----PPGI-----SPFGYH---HTTDPTIYRSVY 118

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009908 "flower development" evidence=IMP

GO:0010093 "specification of floral organ identity" evidence=RCA;IMP

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0010158 "abaxial cell fate specification" evidence=IMP

GO:0048440 "carpel development" evidence=IGI;RCA

GO:0048443 "stamen development" evidence=IGI

GO:0048653 "anther development" evidence=IGI

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

TAIR|locus:2009952 NUB "AT1G13400" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 57/89 (64%), Positives = 64/89 (71%)

Query:    49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC 108
             GK YECRFCSLKF KSQALGGHMNRHRQERETE+LNKAR+LV + ND+      PPH G 
Sbjct:    47 GKEYECRFCSLKFFKSQALGGHMNRHRQERETESLNKARELVLR-NDSF-----PPHQG- 99

Query:   109 HPMTPGSYHPAG-HIGD--PFRSI-YPPR 133
              P +  SYH    HIGD   F+ + YPPR
Sbjct:   100 -PPS-FSYHQGDVHIGDLTQFKPMMYPPR 126

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0048440 "carpel development" evidence=IGI;RCA

GO:0048443 "stamen development" evidence=IGI

GO:0048653 "anther development" evidence=IGI

GO:0010093 "specification of floral organ identity" evidence=RCA

UNIPROTKB|Q9LG97 SL1 "Zinc finger protein STAMENLESS 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 262 (97.3 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
 Identities = 53/87 (60%), Positives = 61/87 (70%)

Query:    16 YSKQVLDESSSTGAGAGHRXXXXXXXXXXXX-ECGKVYECRFCSLKFCKSQALGGHMNRH 74
             + KQ ++ S++T A +                E GKVYECRFCSLKFCKSQALGGHMNRH
Sbjct:    21 FGKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECRFCSLKFCKSQALGGHMNRH 80

Query:    75 RQERETETLNKARQLVFQHNDNLAVQG 101
             RQERETETLN+ARQLVF  ND+LA  G
Sbjct:    81 RQERETETLNRARQLVFG-NDSLAAVG 106

GO:0005634 "nucleus" evidence=IDA

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0010094 "specification of carpel identity" evidence=IMP

GO:0010097 "specification of stamen identity" evidence=IMP

GO:0048437 "floral organ development" evidence=IMP

TAIR|locus:2143300 AT5G27880 "AT5G27880" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 38/113 (33%), Positives = 50/113 (44%)

Query:    23 ESSSTGAGAGHRXXXXXXXXXXXXECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET 82
             E+SS G+ A  R            +  K+Y C FC   F  SQALGGH N H+QERE + 
Sbjct:    53 ENSSFGSSAVRRGREIMKFYPS--KSNKIYTCHFCKKGFSTSQALGGHQNAHKQEREWDK 110

Query:    83 LNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGSYHPAGHIG---DPF-RSIYP 131
               K  +  +     L      PH+     +  +     H+G   DPF R IYP
Sbjct:   111 KRKEMEAEYPGLSFLNPFLDKPHILLGGYSQDALSNENHLGITLDPFKRLIYP 163

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2175309 AT5G05120 "AT5G05120" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query:    51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKA 86
             +Y+C++C  KF K+QALGGH N HR+ERE E   KA
Sbjct:    26 IYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQQKA 61

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2158367 AT5G43540 "AT5G43540" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 5.8e-07, P = 5.8e-07
 Identities = 28/64 (43%), Positives = 34/64 (53%)

Query:    24 SSSTGAGAGHRXXXXXXXXXXXXECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL 83
             SS TGA   HR               ++YEC FC   F  +QALGGHMN HR++R    L
Sbjct:    11 SSETGA-VRHRRTSSSSVSTVTR---RMYECTFCKRGFTNAQALGGHMNIHRRDR----L 62

Query:    84 NKAR 87
             NKA+
Sbjct:    63 NKAK 66

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query:    50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG 107
             +V+ C +C  KF  SQALGGH N H+ ER   TL K  + +F+ ++ +    P P  G
Sbjct:    50 RVFSCNYCQRKFYSSQALGGHQNAHKLER---TLAKKSRELFRSSNTVDSDQPYPFSG 104

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2019723 ZFP6 "AT1G67030" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 30/74 (40%), Positives = 41/74 (55%)

Query:    52 YECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPM 111
             YEC++C  +F  SQALGGH N H++ER+   L K  Q+       LA +G P H   HP 
Sbjct:    41 YECQYCCREFANSQALGGHQNAHKKERQ---LLKRAQM-------LATRGLPRHHNFHPH 90

Query:   112 T-P--GSYHPAGHI 122
             T P   ++ P  H+
Sbjct:    91 TNPLLSAFAPLPHL 104

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2156529 LATE "LATE FLOWERING" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
 Identities = 30/85 (35%), Positives = 43/85 (50%)

Query:    50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC- 108
             +++ C FCS KF  SQALGGH N H++ER T      R   F +N++  +   P  L   
Sbjct:    33 RIFPCLFCSRKFHSSQALGGHQNAHKKER-TAARRAKRAYDFVNNNDF-LHTLPVFLSSP 90

Query:   109 --HPMTPGSYHPAGHIGDPFRSIYP 131
               H +T   Y PA      F +++P
Sbjct:    91 SQHHLTILGY-PASASVACFPTVHP 114

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042752 "regulation of circadian rhythm" evidence=IMP

GO:0048579 "negative regulation of long-day photoperiodism, flowering" evidence=IMP

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 0.00044, P = 0.00044
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query:    50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAV--QGPPPHL 106
             +V+ C FC  +F  SQALGGH N H+QER   +L K R+ +  +   L++  Q PP  L
Sbjct:    65 RVFACTFCKKEFSTSQALGGHQNAHKQER---SLAKRRKEIEINYPELSIYSQYPPSGL 120


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.446    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      286       209   0.00079  112 3  11 22  0.36    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  194 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.23u 0.13s 19.36t   Elapsed:  00:00:01
  Total cpu time:  19.23u 0.13s 19.36t   Elapsed:  00:00:01
  Start:  Sat May 11 05:19:23 2013   End:  Sat May 11 05:19:24 2013

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.74
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.59
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.35
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.35
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.27
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.19
KOG3576	267	consensus Ovo and related transcription factors [T	99.18
PHA02768	55	hypothetical protein; Provisional	98.81
KOG3608	467	consensus Zn finger proteins [General function pre	98.76
KOG3608	467	consensus Zn finger proteins [General function pre	98.48
KOG3576	267	consensus Ovo and related transcription factors [T	98.46
PHA00733	128	hypothetical protein	98.43
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.32
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.11
PLN03086	567	PRLI-interacting factor K; Provisional	98.05
PHA00616	44	hypothetical protein	98.03
PHA02768	55	hypothetical protein; Provisional	97.99
PHA00732	79	hypothetical protein	97.72
PLN03086	567	PRLI-interacting factor K; Provisional	97.46
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.38
PHA00733	128	hypothetical protein	97.01
KOG3993	500	consensus Transcription factor (contains Zn finger	96.96
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.86
PHA00732	79	hypothetical protein	96.73
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.59
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.57
PHA00616	44	hypothetical protein	96.39
smart00355	26	ZnF_C2H2 zinc finger.	96.31
PRK04860	160	hypothetical protein; Provisional	96.29
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.0
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.28
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.81
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.67
COG5048	467	FOG: Zn-finger [General function prediction only]	94.44
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	94.29
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.73
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.71
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	93.62
COG5048	467	FOG: Zn-finger [General function prediction only]	93.43
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.34
KOG3993	500	consensus Transcription factor (contains Zn finger	92.6
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.79
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	91.56
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.35
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	90.33
KOG2893	341	consensus Zn finger protein [General function pred	89.29
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.26
smart00355	26	ZnF_C2H2 zinc finger.	88.35
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.07
PRK04860	160	hypothetical protein; Provisional	85.62
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	80.32

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.74  E-value=9.7e-19  Score=159.79  Aligned_cols=94  Identities=20%  Similarity=0.306  Sum_probs=87.7

Q ss_pred             hhcccccCCCchhhhhhhccC---CCCccCCCCCCc-----------------ccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKS---GAKDGKDDECGK-----------------VYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~Ht---GeKpf~C~~~eK-----------------Py~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ..|+|.+.+.++|.+|+.+|.   ..|.+.|+.|+|                 +++|.+|||.|.+.--|+.|+|+||||
T Consensus       134 ~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGE  213 (279)
T KOG2462|consen  134 PECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGE  213 (279)
T ss_pred             cccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCC
Confidence            789999999999999999884   467899999986                 899999999999999999999999999


Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      |||.|..|+|  +|..+++|+.|++ +|.+.|.|.|.
T Consensus       214 KPF~C~hC~k--AFADRSNLRAHmQ-THS~~K~~qC~  247 (279)
T KOG2462|consen  214 KPFSCPHCGK--AFADRSNLRAHMQ-THSDVKKHQCP  247 (279)
T ss_pred             CCccCCcccc--hhcchHHHHHHHH-hhcCCccccCc
Confidence            9999999999  9999999999999 99999999863

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.59  E-value=2.2e-16  Score=144.47  Aligned_cols=74  Identities=19%  Similarity=0.307  Sum_probs=61.7

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|+|.|.+..-|+.|+|+||||         |||.|..|+|+|..+++|+.||++|.+.|+|+|..|+|  +|...+-|
T Consensus       191 ~iCGKaFSRPWLLQGHiRTHTGE---------KPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~K--sFsl~SyL  259 (279)
T KOG2462|consen  191 GICGKAFSRPWLLQGHIRTHTGE---------KPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGK--SFALKSYL  259 (279)
T ss_pred             ccccccccchHHhhcccccccCC---------CCccCCcccchhcchHHHHHHHHhhcCCccccCcchhh--HHHHHHHH
Confidence            45555555555555555555554         46788899999999999999999999999999999999  99999999


Q ss_pred             hhcCC
Q 040647           98 AVQGP  102 (286)
Q Consensus        98 ~~H~r  102 (286)
                      .+|..
T Consensus       260 nKH~E  264 (279)
T KOG2462|consen  260 NKHSE  264 (279)
T ss_pred             HHhhh
Confidence            99987

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.35  E-value=3.1e-13  Score=138.08  Aligned_cols=60  Identities=23%  Similarity=0.264  Sum_probs=57.0

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |-+|.+|-|...-.++|+.|.|+|||||||+|++|+|  .|+++.+|+.|+. +|....+++.
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgR--AFtTkGNLkaH~~-vHka~p~~R~  664 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGR--AFTTKGNLKAHMS-VHKAKPPARV  664 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccc--hhccccchhhccc-ccccCccccc
Confidence            8899999999999999999999999999999999999  9999999999999 9988777764

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.35  E-value=1.4e-13  Score=138.80  Aligned_cols=87  Identities=20%  Similarity=0.287  Sum_probs=77.9

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ++|+|.|...+.|.+|.--|+|.+         ||+|.+|.|+|+.+.+|..|+|+|.|||||+|+.|+|  +|++..+.
T Consensus       898 DqCDK~FqKqSSLaRHKYEHsGqR---------PyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClK--RFSHSGSY  966 (1007)
T KOG3623|consen  898 DQCDKAFQKQSSLARHKYEHSGQR---------PYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLK--RFSHSGSY  966 (1007)
T ss_pred             HHHHHHHHhhHHHHHhhhhhcCCC---------CcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhh--hcccccch
Confidence            899999999999999999999976         5788899999999999999999999999999999999  99999999


Q ss_pred             hhcCCCCCCCCCCCCCCC
Q 040647           98 AVQGPPPHLGCHPMTPGS  115 (286)
Q Consensus        98 ~~H~r~~H~g~kP~~~~~  115 (286)
                      ..||.-...-+|+|+-..
T Consensus       967 SQHMNHRYSYCKpyrEer  984 (1007)
T KOG3623|consen  967 SQHMNHRYSYCKPYREER  984 (1007)
T ss_pred             Hhhhccchhcccchhhcc
Confidence            999982234577776433

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.27  E-value=1.1e-12  Score=132.42  Aligned_cols=84  Identities=15%  Similarity=0.163  Sum_probs=72.7

Q ss_pred             hhhcccccCCCchhhhhhhccCCCCccC----CCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccC
Q 040647           17 SKQVLDESSSTGAGAGHRKKKSGAKDGK----DDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQ   92 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~HtGeKpf~----C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs   92 (286)
                      |-.|.-.|..+..|.+||.+|.--.+-.    =..|-|.|+|.+|+|+|+.+.+|+.|+|+|.|||||+|+.|.|  +|+
T Consensus       243 C~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkK--RFS  320 (1007)
T KOG3623|consen  243 CMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKK--RFS  320 (1007)
T ss_pred             chhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccccc--ccc
Confidence            4789999999999999999986432211    1125689999999999999999999999999999999999999  999


Q ss_pred             CchhhhhcCC
Q 040647           93 HNDNLAVQGP  102 (286)
Q Consensus        93 ~~s~L~~H~r  102 (286)
                      +..+...|+.
T Consensus       321 HSGSySSHmS  330 (1007)
T KOG3623|consen  321 HSGSYSSHMS  330 (1007)
T ss_pred             cCCccccccc
Confidence            9999998876

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.19  E-value=1.1e-11  Score=126.95  Aligned_cols=60  Identities=25%  Similarity=0.326  Sum_probs=56.5

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .+.|.+|+|.|..+++|++|||+|+++|||.|..|++  .|+.+.+|+.||. +|....+...
T Consensus       879 ~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~--aFttrgnLKvHMg-tH~w~q~~sr  938 (958)
T KOG1074|consen  879 AHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEE--AFTTRGNLKVHMG-THMWVQPPSR  938 (958)
T ss_pred             hhhhccchhcccchHHHHHhhhcCCCCCCccchhhhh--hhhhhhhhhhhhc-cccccCCCcc
Confidence            4889999999999999999999999999999999999  9999999999999 8988777653

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.18  E-value=7.6e-13  Score=116.92  Aligned_cols=83  Identities=19%  Similarity=0.139  Sum_probs=74.9

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|+|.|.-..-|.+|++-|...|         .|.|.+|||.|...-+|++|+|+|||.|||+|..|++  +|+++.+|
T Consensus       121 rvCgK~F~lQRmlnrh~kch~~vk---------r~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~k--aftqrcsl  189 (267)
T KOG3576|consen  121 RVCGKKFGLQRMLNRHLKCHSDVK---------RHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEK--AFTQRCSL  189 (267)
T ss_pred             ehhhhhhhHHHHHHHHhhhccHHH---------HHHHhhccCcccchhhhhhhhccccCccccchhhhhH--HHHhhccH
Confidence            899999998889999999887644         6889999999999999999999999999999999999  99999999


Q ss_pred             hhcCCCCCCCCCCC
Q 040647           98 AVQGPPPHLGCHPM  111 (286)
Q Consensus        98 ~~H~r~~H~g~kP~  111 (286)
                      ..|.+++|.....|
T Consensus       190 eshl~kvhgv~~~y  203 (267)
T KOG3576|consen  190 ESHLKKVHGVQHQY  203 (267)
T ss_pred             HHHHHHHcCchHHH
Confidence            99998888754433

>PHA02768 hypothetical protein; Provisional

Probab=98.81  E-value=1.6e-09  Score=77.25  Aligned_cols=44  Identities=20%  Similarity=0.422  Sum_probs=40.8

Q ss_pred             cccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhh
Q 040647           52 YECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAV   99 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~   99 (286)
                      |+|+.|||.|.+.++|++||++|+  ++++|..|++  .|.+.+.|..
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k--~f~~~s~l~~   49 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKR--ISLRTGEYIE   49 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccc--eecccceeEE
Confidence            899999999999999999999999  7999999999  9998887753

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.76  E-value=2.9e-09  Score=100.83  Aligned_cols=87  Identities=17%  Similarity=0.264  Sum_probs=69.6

Q ss_pred             hhhcccccCCCchhhhhhhccCCCCccCCCCCC-----------------------------------------------
Q 040647           17 SKQVLDESSSTGAGAGHRKKKSGAKDGKDDECG-----------------------------------------------   49 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~e-----------------------------------------------   49 (286)
                      |..|-+.|.++..|++|.|.|++||...|..|+                                               
T Consensus       182 W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv  261 (467)
T KOG3608|consen  182 WAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV  261 (467)
T ss_pred             chhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh
Confidence            388999999999999999999999999888744                                               


Q ss_pred             cccccCcCCcccCCchhhhhhhh-hcCCCcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMN-RHRQERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r-~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      .-|+|+.|+......+.|.+|+| .|...|||+|+.|.+  .|.+.+.|++|.. +|.
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~--~c~~esdL~kH~~-~HS  316 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDT--RCVRESDLAKHVQ-VHS  316 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhccCCCccccchhh--hhccHHHHHHHHH-hcc
Confidence            14677777777777777777766 377788888888888  7777888888877 665

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.48  E-value=2.1e-08  Score=95.12  Aligned_cols=85  Identities=14%  Similarity=0.168  Sum_probs=66.4

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCC--------------------cccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECG--------------------KVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~e--------------------KPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ++|.|.|.....|+.|++.|..  -|+|+.|.                    |||+|+.|++.|.+.+.|.+|..+|. +
T Consensus       241 ~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~  317 (467)
T KOG3608|consen  241 AQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-K  317 (467)
T ss_pred             HHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-c
Confidence            8999999999999999988854  56777643                    78888888888888888888888887 6


Q ss_pred             cccccCC--CCcccccCCchhhhhcCCCCCCC
Q 040647           78 RETETLN--KARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        78 KPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      .-|+|..  |-.  +|++...+++|.+.+|.+
T Consensus       318 ~~y~C~h~~C~~--s~r~~~q~~~H~~evhEg  347 (467)
T KOG3608|consen  318 TVYQCEHPDCHY--SVRTYTQMRRHFLEVHEG  347 (467)
T ss_pred             cceecCCCCCcH--HHHHHHHHHHHHHHhccC
Confidence            6677766  665  667777777777666654

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.46  E-value=3.3e-08  Score=87.81  Aligned_cols=62  Identities=21%  Similarity=0.374  Sum_probs=59.5

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      ..|.|++|+|.|.-...|.+|++.|...|.|.|..||+  .|...-.|++|+| +|+|.+||+|.
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgk--gfndtfdlkrh~r-thtgvrpykc~  177 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGK--GFNDTFDLKRHTR-THTGVRPYKCS  177 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccC--cccchhhhhhhhc-cccCccccchh
Confidence            47999999999999999999999999999999999999  9999999999999 99999999973

>PHA00733 hypothetical protein

Probab=98.43  E-value=1.1e-07  Score=79.17  Aligned_cols=78  Identities=17%  Similarity=0.135  Sum_probs=59.7

Q ss_pred             hhcccccCCCchhhhh--hhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCch
Q 040647           18 KQVLDESSSTGAGAGH--RKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHND   95 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H--~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s   95 (286)
                      ..|.+.|.....|..+  ++.|.-.      ..++||+|+.|++.|.....|..|+++|  +++|.|..|++  .|....
T Consensus        44 ~~~~~~~~~~~~l~~~~~l~~~~~~------~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK--~F~~~~  113 (128)
T PHA00733         44 AVVKTLIYNPQLLDESSYLYKLLTS------KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGK--EFRNTD  113 (128)
T ss_pred             HHHhhhccChhhhcchHHHHhhccc------CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCC--ccCCHH
Confidence            6777777776666555  2222110      1245788999999999999999999987  46899999999  999999


Q ss_pred             hhhhcCCCCC
Q 040647           96 NLAVQGPPPH  105 (286)
Q Consensus        96 ~L~~H~r~~H  105 (286)
                      +|.+|+.+-|
T Consensus       114 sL~~H~~~~h  123 (128)
T PHA00733        114 STLDHVCKKH  123 (128)
T ss_pred             HHHHHHHHhc
Confidence            9999987444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.32  E-value=2.5e-07  Score=56.23  Aligned_cols=25  Identities=24%  Similarity=0.327  Sum_probs=18.8

Q ss_pred             hhhhhhhhcCCCcccccCCCCcccccC
Q 040647           66 ALGGHMNRHRQERETETLNKARQLVFQ   92 (286)
Q Consensus        66 ~L~~H~r~HtgeKPy~C~~Cgr~~sFs   92 (286)
                      +|.+|+++|++||||+|..|++  .|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k--~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGK--SFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSE--EES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcC--eeC
Confidence            4677777777777777777777  665

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.11  E-value=9.7e-07  Score=53.58  Aligned_cols=26  Identities=27%  Similarity=0.699  Sum_probs=20.6

Q ss_pred             hhhhhhhccCCCCccCCCCCCcccccCcCCcccCC
Q 040647           29 AGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCK   63 (286)
Q Consensus        29 ~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~   63 (286)
                      +|.+|+++|+||||         |+|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~---------~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP---------YKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSS---------EEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCC---------CCCCCCcCeeCc
Confidence            58899999999775         677778777753

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.05  E-value=2.5e-06  Score=86.35  Aligned_cols=78  Identities=12%  Similarity=0.110  Sum_probs=53.5

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccC-----
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQ-----   92 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs-----   92 (286)
                      +.|++.|. ...|..|+++|+  ++         +.|. |++.+ .+..|..|+++|..+|++.|..|++  .|.     
T Consensus       457 ~~Cgk~f~-~s~LekH~~~~H--kp---------v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~--~v~~g~~~  520 (567)
T PLN03086        457 EKCGQAFQ-QGEMEKHMKVFH--EP---------LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGD--MVQAGGSA  520 (567)
T ss_pred             CCCCCccc-hHHHHHHHHhcC--CC---------ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCC--ccccCccc
Confidence            78888885 577899988874  44         4555 77544 4567777877777778888888777  663     


Q ss_pred             -----CchhhhhcCCCCCCCCCCCCC
Q 040647           93 -----HNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        93 -----~~s~L~~H~r~~H~g~kP~~~  113 (286)
                           ....|+.|.. + .+.+++.|
T Consensus       521 ~d~~d~~s~Lt~HE~-~-CG~rt~~C  544 (567)
T PLN03086        521 MDVRDRLRGMSEHES-I-CGSRTAPC  544 (567)
T ss_pred             cchhhhhhhHHHHHH-h-cCCcceEc
Confidence                 1246777776 3 36666654

>PHA00616 hypothetical protein

Probab=98.03  E-value=1.3e-06  Score=59.69  Aligned_cols=34  Identities=18%  Similarity=0.302  Sum_probs=31.9

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      ||+|..||+.|.+.+.|.+|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999998864

>PHA02768 hypothetical protein; Provisional

Probab=97.99  E-value=2.2e-06  Score=61.24  Aligned_cols=41  Identities=7%  Similarity=-0.069  Sum_probs=35.6

Q ss_pred             hhhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhh
Q 040647           17 SKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALG   68 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~   68 (286)
                      ++.|+|.|.+..+|..|||+|+  |         +|+|..|+|.|.+.+.|.
T Consensus         8 C~~CGK~Fs~~~~L~~H~r~H~--k---------~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          8 CPICGEIYIKRKSMITHLRKHN--T---------NLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cchhCCeeccHHHHHHHHHhcC--C---------cccCCcccceecccceeE
Confidence            3799999999999999999998  3         577888999999887765

>PHA00732 hypothetical protein

Probab=97.72  E-value=2.2e-05  Score=60.20  Aligned_cols=44  Identities=18%  Similarity=0.308  Sum_probs=37.6

Q ss_pred             ccccCcCCcccCCchhhhhhhh-hcCCCcccccCCCCcccccCCchhhhhcCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMN-RHRQERETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r-~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      ||.|+.|++.|.+..+|++|++ .|++   +.|..|++  .|.   .|..|.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgK--sF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNK--SYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCC--EeC---Chhhhhc
Confidence            5889999999999999999998 4764   58999999  887   5777776

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.46  E-value=7.4e-05  Score=75.87  Aligned_cols=57  Identities=12%  Similarity=0.189  Sum_probs=50.1

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +.+.|+.|++.|. ...|..|+++|+  +++.|. |++  .+. +..|..|++ +|..++++.|.
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~--~~~-R~~L~~H~~-thCp~Kpi~C~  508 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGV--VLE-KEQMVQHQA-STCPLRLITCR  508 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCC--Ccc-hhHHHhhhh-ccCCCCceeCC
Confidence            6889999999996 578999999985  899999 998  664 689999998 89999999875

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.38  E-value=5.7e-05  Score=43.86  Aligned_cols=23  Identities=39%  Similarity=0.882  Sum_probs=20.5

Q ss_pred             cccCcCCcccCCchhhhhhhhhc
Q 040647           52 YECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      |+|+.|++.|.+...|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00733 hypothetical protein

Probab=97.01  E-value=0.00029  Score=58.63  Aligned_cols=54  Identities=9%  Similarity=-0.108  Sum_probs=43.8

Q ss_pred             CcccccCcCCcccCCchhhhhh--hh---hcCCCcccccCCCCcccccCCchhhhhcCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGH--MN---RHRQERETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H--~r---~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      .|++.|.+|.+.|.....|..|  ++   .+.+++||.|..|++  .|....+|..|++ .|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk--~Fss~s~L~~H~r-~h   96 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLM--PFSSSVSLKQHIR-YT   96 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCC--cCCCHHHHHHHHh-cC
Confidence            3678999999988888777665  11   233589999999999  9999999999998 55

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.96  E-value=0.00015  Score=70.58  Aligned_cols=78  Identities=18%  Similarity=0.183  Sum_probs=58.0

Q ss_pred             hhhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcC--------CCc----------
Q 040647           17 SKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHR--------QER----------   78 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Ht--------geK----------   78 (286)
                      |..|...|...-.|.+|+....-.-         -|+|.+|+|.|.-..+|..|+|-|.        +..          
T Consensus       270 CqLCK~kYeD~F~LAQHrC~RIV~v---------EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~ra  340 (500)
T KOG3993|consen  270 CQLCKEKYEDAFALAQHRCPRIVHV---------EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRA  340 (500)
T ss_pred             HHHHHHhhhhHHHHhhccCCeeEEe---------eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhh
Confidence            3778788877778888864221111         2778888888888889999988774        111          


Q ss_pred             ---------------ccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           79 ---------------ETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        79 ---------------Py~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                                     -|.|..|+|  .|++..-|++|+. +|.
T Consensus       341 e~~ea~rsg~dss~gi~~C~~C~K--kFrRqAYLrKHql-thq  380 (500)
T KOG3993|consen  341 EVQEAERSGDDSSSGIFSCHTCGK--KFRRQAYLRKHQL-THQ  380 (500)
T ss_pred             hhhhccccCCcccCceeecHHhhh--hhHHHHHHHHhHH-hhh
Confidence                           378999999  9999999999988 444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.86  E-value=0.00046  Score=41.51  Aligned_cols=25  Identities=32%  Similarity=0.567  Sum_probs=21.2

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      +|+|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5788899999999999999988774

>PHA00732 hypothetical protein

Probab=96.73  E-value=0.00077  Score=51.68  Aligned_cols=45  Identities=13%  Similarity=0.162  Sum_probs=36.0

Q ss_pred             hhhcccccCCCchhhhhhhc-cCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCC
Q 040647           17 SKQVLDESSSTGAGAGHRKK-KSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~-HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      ++.|++.|.+...|+.|++. |++            +.|+.|++.|.   .|..|++++..
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~~------------~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHTL------------TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccCC------------CccCCCCCEeC---ChhhhhcccCC
Confidence            37899999999999999984 653            46889999998   57888865443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.59  E-value=0.001  Score=63.03  Aligned_cols=53  Identities=21%  Similarity=0.386  Sum_probs=43.5

Q ss_pred             CCcccccCc--CCcccCCchhhhhhhhh-c------------------CCCcccccCCCCcccccCCchhhhhcCC
Q 040647           48 CGKVYECRF--CSLKFCKSQALGGHMNR-H------------------RQERETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        48 ~eKPy~C~~--Cgk~F~~ss~L~~H~r~-H------------------tgeKPy~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      .||||+|++  |+|.+++..-|+-|+.- |                  ...|||.|.+|+|  ++...--|+-|.+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~K--RYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDK--RYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccch--hhccCccceeccc
Confidence            458889887  99999999999999742 2                  1348999999999  9998888888766

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.57  E-value=0.00089  Score=38.33  Aligned_cols=23  Identities=30%  Similarity=0.752  Sum_probs=18.5

Q ss_pred             cccCcCCcccCCchhhhhhhhhc
Q 040647           52 YECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            67999999999999999998876

...

>PHA00616 hypothetical protein

Probab=96.39  E-value=0.00058  Score=46.67  Aligned_cols=32  Identities=9%  Similarity=0.033  Sum_probs=28.8

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ||+|..||+  .|..+++|++|++ .|++++++.+
T Consensus         1 pYqC~~CG~--~F~~~s~l~~H~r-~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGG--IFRKKKEVIEHLL-SVHKQNKLTL   32 (44)
T ss_pred             CCccchhhH--HHhhHHHHHHHHH-HhcCCCccce
Confidence            689999999  9999999999999 7888887763

>smart00355 ZnF_C2H2 zinc finger

Probab=96.31  E-value=0.0022  Score=36.99  Aligned_cols=25  Identities=36%  Similarity=0.643  Sum_probs=21.0

Q ss_pred             cccCcCCcccCCchhhhhhhhhcCC
Q 040647           52 YECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      |+|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5788899999999999999887753

>PRK04860 hypothetical protein; Provisional

Probab=96.29  E-value=0.0019  Score=55.82  Aligned_cols=36  Identities=17%  Similarity=0.267  Sum_probs=32.2

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQ   92 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs   92 (286)
                      +|.|. |++   ....+++|.++|+++++|.|..|++  .|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~--~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGE--TLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCc--eeE
Confidence            79998 998   6778899999999999999999999  554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.00  E-value=0.0031  Score=44.51  Aligned_cols=47  Identities=21%  Similarity=0.341  Sum_probs=36.1

Q ss_pred             ccccCcCCcccCCchhhhhhhh-hcCCC-cccccCCCCcccccCCchhhhhcCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMN-RHRQE-RETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r-~Htge-KPy~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      .|.|++|++. .....|..|.. .|..+ +.+.|++|..  .++  .+|.+|+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~--~~~--~~l~~Hl~   50 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSS--RVT--DNLIRHLN   50 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchh--hhh--hHHHHHHH
Confidence            4889999995 44578999954 56664 6799999998  555  48888887

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.28  E-value=0.0087  Score=42.20  Aligned_cols=32  Identities=16%  Similarity=0.338  Sum_probs=21.7

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      .++|..|++|+..+.+..+|++|+.++.+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            35678889999999999999999988777775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.81  E-value=0.014  Score=44.65  Aligned_cols=57  Identities=26%  Similarity=0.321  Sum_probs=16.5

Q ss_pred             hhcccccCCCchhhhhhhccCCCC-c---cCCCC----------CCcccccCcCCcccCCchhhhhhhhhc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAK-D---GKDDE----------CGKVYECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeK-p---f~C~~----------~eKPy~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      ..|...|.....|..|+....+-. +   .....          -...+.|..|++.|.....|..||+.+
T Consensus         3 ~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    3 LFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ----------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            358889999999999986433311 1   00000          112467777777777777777777654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.67  E-value=0.013  Score=34.38  Aligned_cols=23  Identities=22%  Similarity=0.663  Sum_probs=19.6

Q ss_pred             cccCcCCcccCCchhhhhhhhhc
Q 040647           52 YECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      |.|++|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57899999999999999998754

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.44  E-value=0.026  Score=52.83  Aligned_cols=61  Identities=21%  Similarity=0.334  Sum_probs=55.1

Q ss_pred             cccccCcCCcccCCchhhhhhhh--hcCCC--cccccC--CCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMN--RHRQE--RETETL--NKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r--~Htge--KPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +++.|..|.+.|.....|.+|.+  .|+++  +++.|.  .|++  .|.+.+.+.+|.. +|...++...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~  354 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGK--LFSRNDALKRHIL-LHTSISPAKE  354 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCc--cccccccccCCcc-cccCCCcccc
Confidence            37899999999999999999999  89999  999999  7999  9999999999999 8887766553

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.29  E-value=0.0049  Score=35.50  Aligned_cols=21  Identities=14%  Similarity=0.059  Sum_probs=19.7

Q ss_pred             cccCCCCcccccCCchhhhhcCC
Q 040647           80 TETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        80 y~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      |+|..|++  .|.+...|.+|++
T Consensus         1 y~C~~C~~--~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGK--SFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTE--EESSHHHHHHHHH
T ss_pred             CCCCCCCC--ccCCHHHHHHHHh
Confidence            68999999  9999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.73  E-value=0.03  Score=33.73  Aligned_cols=22  Identities=27%  Similarity=0.603  Sum_probs=18.6

Q ss_pred             cccCcCCcccCCchhhhhhhhh
Q 040647           52 YECRFCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~   73 (286)
                      |.|..|+|.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788899999999888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.71  E-value=0.031  Score=53.19  Aligned_cols=55  Identities=13%  Similarity=0.159  Sum_probs=38.8

Q ss_pred             hhcccccCCCchhhhhhhc-cC----CCCccC-----CCCCCcccccCcCCcccCCchhhhhhhh
Q 040647           18 KQVLDESSSTGAGAGHRKK-KS----GAKDGK-----DDECGKVYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~-Ht----GeKpf~-----C~~~eKPy~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      +.|.|.++..-.|+-|+.- |-    .|.|-.     -....|||+|++|+|++++..-|+-|+.
T Consensus       355 ~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         355 EGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            7888888888888888642 21    111110     1115599999999999999999998853

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=93.62  E-value=0.026  Score=33.68  Aligned_cols=25  Identities=16%  Similarity=0.102  Sum_probs=22.4

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      +|+|..|++  .|.....|..|++ .|.
T Consensus         1 ~~~C~~C~~--~F~~~~~l~~H~~-~h~   25 (27)
T PF13912_consen    1 PFECDECGK--TFSSLSALREHKR-SHC   25 (27)
T ss_dssp             SEEETTTTE--EESSHHHHHHHHC-TTT
T ss_pred             CCCCCccCC--ccCChhHHHHHhH-Hhc
Confidence            589999999  9999999999998 553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.43  E-value=0.046  Score=51.12  Aligned_cols=63  Identities=22%  Similarity=0.206  Sum_probs=53.7

Q ss_pred             hhcccccCCCchhhhhhh--ccCCC--CccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCc
Q 040647           18 KQVLDESSSTGAGAGHRK--KKSGA--KDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKAR   87 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r--~HtGe--Kpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr   87 (286)
                      ..|.+.|.+...|..|.+  .|+++  +++.|     ++.  .|++.|.+...+.+|..+|++.++..|.....
T Consensus       293 ~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~-----p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (467)
T COG5048         293 KQCNISFSRSSPLTRHLRSVNHSGESLKPFSC-----PYS--LCGKLFSRNDALKRHILLHTSISPAKEKLLNS  359 (467)
T ss_pred             ccccCCccccccccccccccccccccCCceee-----ecc--CCCccccccccccCCcccccCCCccccccccC
Confidence            789999999999999999  89998  66555     233  79999999999999999999999888865443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.34  E-value=0.021  Score=43.58  Aligned_cols=49  Identities=20%  Similarity=0.371  Sum_probs=20.1

Q ss_pred             ccCcCCcccCCchhhhhhhhh-cCC----------------------CcccccCCCCcccccCCchhhhhcCCC
Q 040647           53 ECRFCSLKFCKSQALGGHMNR-HRQ----------------------ERETETLNKARQLVFQHNDNLAVQGPP  103 (286)
Q Consensus        53 ~C~~Cgk~F~~ss~L~~H~r~-Htg----------------------eKPy~C~~Cgr~~sFs~~s~L~~H~r~  103 (286)
                      +|.+|+..|.....|..|+.. |.-                      ...+.|..|++  .|.....|..|++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~--~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNK--TFRSREALQEHMRS   72 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS---EESSHHHHHHHHHH
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCC--CCcCHHHHHHHHcC
Confidence            589999999999999999853 221                      01488999999  99999999999983

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=92.60  E-value=0.029  Score=55.07  Aligned_cols=53  Identities=26%  Similarity=0.305  Sum_probs=45.8

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      -|.|..|...|...-.|.+|+=.-.-...|+|.+|+|  +|....+|..|.| .|.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~K--VFsCPANLASHRR-WHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDK--VFSCPANLASHRR-WHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccc--cccCchhhhhhhc-ccC
Confidence            3899999999999999999964434446799999999  9999999999999 664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.79  E-value=0.035  Score=39.22  Aligned_cols=40  Identities=13%  Similarity=0.004  Sum_probs=23.5

Q ss_pred             hhhhhh-cCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           68 GGHMNR-HRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        68 ~~H~r~-HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      ..+.+. +..+.|-.|.+|+.  .+++..+|++|+. ++.+.||
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a--~~~~srnLrRHle-~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGA--VIRQSRNLRRHLE-IRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT----EESSHHHHHHHHH-HHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchh--hccchhhHHHHHH-HHhcccC
Confidence            344433 44688999999999  9999999999997 5444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=91.56  E-value=0.025  Score=32.07  Aligned_cols=21  Identities=10%  Similarity=0.042  Sum_probs=17.7

Q ss_pred             cccCCCCcccccCCchhhhhcCC
Q 040647           80 TETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        80 y~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      |.|..|++  .|.....|..|++
T Consensus         1 ~~C~~C~~--~~~~~~~l~~H~~   21 (24)
T PF13894_consen    1 FQCPICGK--SFRSKSELRQHMR   21 (24)
T ss_dssp             EE-SSTS---EESSHHHHHHHHH
T ss_pred             CCCcCCCC--cCCcHHHHHHHHH
Confidence            68999999  9999999999987

...

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.35  E-value=0.15  Score=30.52  Aligned_cols=21  Identities=29%  Similarity=0.570  Sum_probs=15.8

Q ss_pred             cccCcCCcccCCchhhhhhhhh
Q 040647           52 YECRFCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~   73 (286)
                      ..|..|+|.| ..+.|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3688888888 66678888764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=90.33  E-value=0.12  Score=29.97  Aligned_cols=22  Identities=36%  Similarity=0.809  Sum_probs=16.4

Q ss_pred             cccCcCCcccCCchhhhhhhhhc
Q 040647           52 YECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      |+|+.|+.... ...|.+|+++|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            67889998887 77899998875

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=89.29  E-value=0.13  Score=47.42  Aligned_cols=52  Identities=21%  Similarity=0.357  Sum_probs=38.9

Q ss_pred             CCcchhhhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhh-hhhcCC
Q 040647           12 LPEDYSKQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGH-MNRHRQ   76 (286)
Q Consensus        12 l~~e~~~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H-~r~Htg   76 (286)
                      +.+.||=-|.+.|-....|..|++.             |-|+|.+|.|.....--|..| |++|..
T Consensus         8 ~~kpwcwycnrefddekiliqhqka-------------khfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen    8 VDKPWCWYCNREFDDEKILIQHQKA-------------KHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             cCCceeeecccccchhhhhhhhhhh-------------ccceeeeehhhhccCCCceeehhhhhhh
Confidence            4467888999999999999999864             247777887776666667666 667653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.26  E-value=0.26  Score=34.62  Aligned_cols=47  Identities=19%  Similarity=0.233  Sum_probs=32.8

Q ss_pred             hhcccccCCCchhhhhhh-ccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcC
Q 040647           18 KQVLDESSSTGAGAGHRK-KKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r-~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      ..|++. .+...|..|.. .|..++        +.+.|++|...+.  .+|.+|++.+.
T Consensus         6 P~C~~~-~~~~~L~~H~~~~H~~~~--------~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    6 PYCGKG-FSESSLVEHCEDEHRSES--------KNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCCc-cCHHHHHHHHHhHCcCCC--------CCccCCCchhhhh--hHHHHHHHHhc
Confidence            568884 45678999965 465532        3578888887655  38999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=88.35  E-value=0.14  Score=29.03  Aligned_cols=24  Identities=17%  Similarity=0.195  Sum_probs=21.1

Q ss_pred             cccCCCCcccccCCchhhhhcCCCCCC
Q 040647           80 TETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        80 y~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      |+|..|++  .|.....|..|++ .|.
T Consensus         1 ~~C~~C~~--~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGK--VFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcc--hhCCHHHHHHHHH-Hhc
Confidence            57999999  9999999999988 554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.07  E-value=0.34  Score=30.37  Aligned_cols=23  Identities=17%  Similarity=0.668  Sum_probs=19.2

Q ss_pred             ccccCcCCcccCCchhhhhhhhh
Q 040647           51 VYECRFCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~   73 (286)
                      +|.|+.|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47899999999988888888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK04860 hypothetical protein; Provisional

Probab=85.62  E-value=0.4  Score=41.52  Aligned_cols=24  Identities=17%  Similarity=0.189  Sum_probs=18.1

Q ss_pred             CCchhhhhhhccCCCCccCCCCCC
Q 040647           26 STGAGAGHRKKKSGAKDGKDDECG   49 (286)
Q Consensus        26 ~~s~L~~H~r~HtGeKpf~C~~~e   49 (286)
                      ....+.+|.++|+++++|.|..|+
T Consensus       127 ~~~~~rrH~ri~~g~~~YrC~~C~  150 (160)
T PRK04860        127 HQLTVRRHNRVVRGEAVYRCRRCG  150 (160)
T ss_pred             eeCHHHHHHHHhcCCccEECCCCC
Confidence            677889999999998765554443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=80.32  E-value=1.2  Score=26.55  Aligned_cols=21  Identities=10%  Similarity=-0.016  Sum_probs=19.7

Q ss_pred             cccCCCCcccccCCchhhhhcCC
Q 040647           80 TETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        80 y~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      |.|..|++  .|.....|..|++
T Consensus         2 ~~C~~C~k--~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDK--YFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTB--BBSSHHHHHCCTT
T ss_pred             CCcccCCC--CcCCHHHHHHHHc
Confidence            68999999  9999999999987

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	3e-12
3dzy_A	467	Retinoic acid receptor RXR-alpha; DNA-binding, HOS	8e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 59.0 bits (143), Expect = 3e-12
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETL 83
          + Y C FC  +F  +QALGGHMN HR++R    L
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL 38

>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467

 Score = 39.7 bits (92), Expect = 8e-04
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 6/131 (4%)

Query: 115 SYHPAGHIGDPFRSIYPPRLYSTGSSSTLISPPPPPPQPPQYPYPSSTSLASCPSHQYPP 174
           ++H   H+ D        +++ST  +S+L SP           +PS       P   + P
Sbjct: 2   AHHHHHHVDDD------DKMFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSP 55

Query: 175 HQPMNELYVGHVLSSSPHSQYPHNQSNLNNFMDSSYTCIGAPVGHGFVAGSSRGSDMAGS 234
              ++    G     S  S      S       +     G+P     +   S   D+   
Sbjct: 56  ISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPP 115

Query: 235 SSGGRDGSLSN 245
                   +  
Sbjct: 116 LGLNGVLKVPA 126

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.69
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.67
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.64
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.63
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.62
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.61
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.6
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.59
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.56
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.55
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.55
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.54
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.54
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.52
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.51
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.48
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.46
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.42
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.41
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.41
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.4
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.36
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.35
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.35
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.33
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.32
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.3
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.28
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.27
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.25
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.22
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.21
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.21
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.2
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.19
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.17
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.16
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.11
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.1
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.03
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.03
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.02
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.01
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.98
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.97
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.96
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.95
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.94
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.93
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.9
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.9
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.9
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.87
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.85
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.83
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.82
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.81
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.8
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.79
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.78
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.78
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.77
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.74
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.74
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.73
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.73
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.73
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.73
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.71
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.71
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.7
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.7
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.69
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.68
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.68
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.68
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.67
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.67
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.66
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.66
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.64
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.64
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.63
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.62
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.61
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.61
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.59
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.59
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.56
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.56
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.54
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.53
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.53
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.52
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.49
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.4
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.39
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.38
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.37
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.35
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.35
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.31
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.3
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.3
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.63
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.28
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.27
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.25
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.24
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.24
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.21
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.19
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.19
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.17
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.17
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.12
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.11
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.07
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.31
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.04
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.04
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.0
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.97
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.97
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.94
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.84
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.83
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.83
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.67
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.65
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.58
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.52
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.64
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.49
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.47
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.47
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.46
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.56
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.42
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.4
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.34
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.25
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.25
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.24
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.21
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.13
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.21
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.13
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.48
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.46
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.21
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.44
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.43
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	92.51
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.84
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	84.33
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	84.32

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=6.5e-18  Score=133.08  Aligned_cols=90  Identities=22%  Similarity=0.280  Sum_probs=84.0

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCC----------------------cccccCcCCcccCCchhhhhhhhhcC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECG----------------------KVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~e----------------------KPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      ..|++.|.....|..|+++|+++++|.|.+|+                      ++|.|.+|++.|.....|.+|+++|+
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   90 (124)
T 2dlq_A           11 PTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT   90 (124)
T ss_dssp             TTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcC
Confidence            88999999999999999999999999999865                      47999999999999999999999999


Q ss_pred             CCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           76 QERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        76 geKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      ++++|+|..|++  .|.....|++|++..|.++.
T Consensus        91 ~~~~~~C~~C~~--~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           91 GEMPYKCSSCSQ--QFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             SSCSEECSSSCC--EESSHHHHHHHHHHTSSCSS
T ss_pred             CCCCccCCCccc--hhCCHHHHHHHHHHHCCCCC
Confidence            999999999999  99999999999875787653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.67  E-value=7.8e-17  Score=132.52  Aligned_cols=94  Identities=19%  Similarity=0.207  Sum_probs=86.3

Q ss_pred             hhcccccCCCchhhhhhhc-cCCCCc--------cCCCCCC-------------------cccccCc--CCcccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKK-KSGAKD--------GKDDECG-------------------KVYECRF--CSLKFCKSQAL   67 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~-HtGeKp--------f~C~~~e-------------------KPy~C~~--Cgk~F~~ss~L   67 (286)
                      ..|++.|.+...|..|+++ |.++++        |.|.+|+                   ++|+|.+  |++.|.....|
T Consensus        29 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  108 (155)
T 2rpc_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENL  108 (155)
T ss_dssp             CCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHH
T ss_pred             ccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHH
Confidence            8899999999999999997 888765        7898755                   6899998  99999999999


Q ss_pred             hhhhhhcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      .+|+++|+++++|+|..  |++  .|.....|.+|++ +|+++++|.+.
T Consensus       109 ~~H~~~h~~~~~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~k~~~c~  154 (155)
T 2rpc_A          109 KIHKRTHTGEKPFKCEFEGCDR--RFANSSDRKKHMH-VHTSDKSGPSS  154 (155)
T ss_dssp             HHHHTTTCSSCSBCCSSTTCCC--CBSSHHHHHHSST-TTTSCCCSCSC
T ss_pred             HHHHHhhCCCCCccCCCCCCCC--ccCCHHHHHHHHH-HhcCCCCCCCC
Confidence            99999999999999997  999  9999999999999 99999999753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=8.5e-18  Score=120.77  Aligned_cols=58  Identities=16%  Similarity=0.296  Sum_probs=55.7

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      ||||+|++|+|.|...+.|.+|+++|+++|||+|.+|++  .|.+.++|++|++ +|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k--~F~~~~~L~~H~~-~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGK--CFRDQSEVNRHLK-VHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCC--EESSHHHHHHHGG-GGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCC--CcCCHHHHHHHhC-ccCCCC
Confidence            789999999999999999999999999999999999999  9999999999999 999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.67  E-value=8.7e-18  Score=142.94  Aligned_cols=90  Identities=24%  Similarity=0.398  Sum_probs=45.9

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCC-------------------cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECG-------------------KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~e-------------------KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      ..|++.|.....|..|+++|+++++|.|.+|+                   ++|+|++|++.|.....|..|+++|++++
T Consensus        81 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A           81 PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             cccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            44445555555555555555555555554433                   35555555555555555555555555555


Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      +|+|..|++  .|.....|.+|++ +|++++|
T Consensus       161 ~~~C~~C~~--~f~~~~~L~~H~~-~H~~~k~  189 (190)
T 2i13_A          161 PYKCPECGK--SFSRRDALNVHQR-THTGKKT  189 (190)
T ss_dssp             CEECTTTCC--EESSHHHHHHHHT-TC-----
T ss_pred             CeECCCCCC--ccCCHHHHHHHHH-hcCCCCC
Confidence            555555555  5555555555555 5555554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=6.5e-17  Score=124.86  Aligned_cols=83  Identities=19%  Similarity=0.262  Sum_probs=78.6

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|++.|.....|..|+++|++++         +|+|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|
T Consensus        21 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~L   89 (106)
T 2ee8_A           21 KFCGRHFTKSYNLLIHERTHTDER---------PYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGK--GFCQSRTL   89 (106)
T ss_dssp             SSSCCBCSSHHHHHHHHHHHCCSC---------CCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCC--CCSSHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCC---------CcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCC--cccCHHHH
Confidence            899999999999999999999865         5778889999999999999999999999999999999  99999999


Q ss_pred             hhcCCCCCCCCCCCC
Q 040647           98 AVQGPPPHLGCHPMT  112 (286)
Q Consensus        98 ~~H~r~~H~g~kP~~  112 (286)
                      .+|++ +|.+++++.
T Consensus        90 ~~H~~-~H~~~~~~~  103 (106)
T 2ee8_A           90 AVHKT-LHMQTSSPT  103 (106)
T ss_dssp             HHHHH-HTTSCCCCC
T ss_pred             HHHHH-HhCCCCCCc
Confidence            99999 999999886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.64  E-value=1.3e-17  Score=137.10  Aligned_cols=84  Identities=18%  Similarity=0.157  Sum_probs=77.6

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      +.|++.|.+...|..|+++|+++|         +|+|++|++.|.....|..|+++|+++++|.|.+|++  .|.+.+.|
T Consensus        26 ~~C~k~F~~~~~L~~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k--~F~~~~~L   94 (133)
T 2lt7_A           26 IVCKRSYVCLTSLRRHFNIHSWEK---------KYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGK--SFINYQFM   94 (133)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCCS---------CEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCC--EESSHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCCC---------CeeCCccCeecccccchhhhccccCCCccccCCCCCC--CcCCHHHH
Confidence            899999999999999999999876         5788899999999999999999999999999999999  99999999


Q ss_pred             hhcCCCCCCCCCCCCC
Q 040647           98 AVQGPPPHLGCHPMTP  113 (286)
Q Consensus        98 ~~H~r~~H~g~kP~~~  113 (286)
                      ..|++ +|.+++|+..
T Consensus        95 ~~H~~-~hh~~~p~~~  109 (133)
T 2lt7_A           95 SSHIK-SVHSQDPSGD  109 (133)
T ss_dssp             HHHHH-HHTCCCTTSS
T ss_pred             HHHhH-HhcCCCCCCC
Confidence            99999 7777776543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.7e-16  Score=120.21  Aligned_cols=83  Identities=20%  Similarity=0.247  Sum_probs=77.0

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|++.|.+...|..|+++|++++         +|.|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|
T Consensus        12 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l   80 (96)
T 2dmd_A           12 EVCGKCFSRKDKLKTHMRCHTGVK---------PYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPY--ASRNSSQL   80 (96)
T ss_dssp             TTTTBCCCCHHHHHHHGGGCCCCC---------SEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSC--EESSHHHH
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCC---------CEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCC--ccCCHHHH
Confidence            899999999999999999998865         5788899999999999999999999999999999999  99999999


Q ss_pred             hhcCCCCCCCCCCCC
Q 040647           98 AVQGPPPHLGCHPMT  112 (286)
Q Consensus        98 ~~H~r~~H~g~kP~~  112 (286)
                      .+|++ +|.++++..
T Consensus        81 ~~H~~-~h~~~~~p~   94 (96)
T 2dmd_A           81 TVHLR-SHTGDSGPS   94 (96)
T ss_dssp             HHHHT-TCCSCCCCC
T ss_pred             HHHHH-HhcCCCCCC
Confidence            99999 888876543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.62  E-value=6.2e-17  Score=126.78  Aligned_cols=82  Identities=23%  Similarity=0.366  Sum_probs=65.9

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCC--CCC-------------------cccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDD--ECG-------------------KVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~--~~e-------------------KPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      .|++.|.+...|..|+++|+++++|.|.  .|+                   ++|.|++|++.|.....|.+|+++|+++
T Consensus        13 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           13 GCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE   92 (119)
T ss_dssp             TSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTC
T ss_pred             CCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCC
Confidence            5999999999999999999999988886  444                   4677777777777777777777777777


Q ss_pred             ccccc--CCCCcccccCCchhhhhcCC
Q 040647           78 RETET--LNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        78 KPy~C--~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      ++|+|  ..|++  .|.....|.+|++
T Consensus        93 ~~~~C~~~~C~~--~f~~~~~L~~H~~  117 (119)
T 2jp9_A           93 KPFSCRWPSCQK--KFARSDELVRHHN  117 (119)
T ss_dssp             CCEECCSTTCCC--EESSHHHHHHHHH
T ss_pred             CCeeCCCCCCcc--ccCCHHHHHHHHh
Confidence            77777  67777  7777777777766

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.61  E-value=6.9e-17  Score=127.88  Aligned_cols=90  Identities=22%  Similarity=0.319  Sum_probs=70.4

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCC-------------------cccccCc--CCcccCCchhhhhhhhhcCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECG-------------------KVYECRF--CSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~e-------------------KPy~C~~--Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      +.|++.|.+...|..|+++| ++++|.|.+|+                   ++|.|.+  |++.|.....|.+|+++|++
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   89 (124)
T 1ubd_C           11 KGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   89 (124)
T ss_dssp             TTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            38999999999999999999 88888887754                   4788875  88888888888888888888


Q ss_pred             CcccccC--CCCcccccCCchhhhhcCCCCCCCCCCC
Q 040647           77 ERETETL--NKARQLVFQHNDNLAVQGPPPHLGCHPM  111 (286)
Q Consensus        77 eKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~kP~  111 (286)
                      +++|+|.  .|++  .|.....|.+|++ +|++++++
T Consensus        90 ~~~~~C~~~~C~~--~f~~~~~L~~H~~-~H~~~k~~  123 (124)
T 1ubd_C           90 DRPYVCPFDGCNK--KFAQSTNLKSHIL-THAKAKNN  123 (124)
T ss_dssp             CCCCCCCSTTCCC--CCSSTTTTHHHHH-HHC-----
T ss_pred             CCceECCCCCCCC--ccCCHHHHHHHHH-HHcccccC
Confidence            8888884  4888  8888888888888 77777654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.60  E-value=5.6e-17  Score=137.88  Aligned_cols=60  Identities=25%  Similarity=0.430  Sum_probs=36.3

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|.|++|++.|.....|..|+++|+++++|+|..|++  .|.....|.+|++ +|.++++|.|
T Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~L~~H~~-~H~~~~~~~C  164 (190)
T 2i13_A          105 PYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK--SFSREDNLHTHQR-THTGEKPYKC  164 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC--EESCHHHHHHHHH-HHHCCCCEEC
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCc--ccCCHHHHHHHHH-hcCCCCCeEC
Confidence            5556666666666666666666666666666666666  6666666666665 5665555553

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.59  E-value=1e-16  Score=119.74  Aligned_cols=79  Identities=24%  Similarity=0.359  Sum_probs=73.1

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhh
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLA   98 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~   98 (286)
                      .|++.|.....|..|+++|++++         +|.|.+|++.|.....|..|+++|+++++|+|..|++  .|...+.|.
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~   79 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQK---------PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR--KFARSDERK   79 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCC---------CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCC--EESSHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHhCCCC---------CccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCc--hhCCHHHHH
Confidence            69999999999999999998865         5788899999999999999999999999999999999  999999999


Q ss_pred             hcCCCCCCCCC
Q 040647           99 VQGPPPHLGCH  109 (286)
Q Consensus        99 ~H~r~~H~g~k  109 (286)
                      +|++ +|++++
T Consensus        80 ~H~~-~H~~~k   89 (90)
T 1a1h_A           80 RHTK-IHLRQK   89 (90)
T ss_dssp             HHHG-GGGC--
T ss_pred             HHHH-HhcccC
Confidence            9999 898775

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.5e-15  Score=124.36  Aligned_cols=93  Identities=17%  Similarity=0.190  Sum_probs=82.7

Q ss_pred             hhcccccCCCchhhhhhh---ccCCCCccCCCC------------------------CCcccccCc--CCcccCCchhhh
Q 040647           18 KQVLDESSSTGAGAGHRK---KKSGAKDGKDDE------------------------CGKVYECRF--CSLKFCKSQALG   68 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r---~HtGeKpf~C~~------------------------~eKPy~C~~--Cgk~F~~ss~L~   68 (286)
                      +.|++.|.+...|..|++   +|+++++|.|.+                        .+++|.|.+  |++.|.....|.
T Consensus         7 ~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   86 (155)
T 2gli_A            7 DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK   86 (155)
T ss_dssp             TTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHH
T ss_pred             CCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHH
Confidence            789999999999999998   788999999864                        226899985  999999999999


Q ss_pred             hhhhhcCCCcccccCC--CCcccccCCchhhhhcC-CCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLN--KARQLVFQHNDNLAVQG-PPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~-r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..  |++  .|.....|.+|+ + +|.++++|.+
T Consensus        87 ~H~~~h~~~~~~~C~~~~C~~--~f~~~~~L~~H~~~-~H~~~~~~~C  131 (155)
T 2gli_A           87 THLRSHTGEKPYMCEHEGCSK--AFSNASDRAKHQNR-THSNEKPYVC  131 (155)
T ss_dssp             HHHHHTTTCCCEECCSTTCCC--EESSSSTTHHHHHH-TTCSCCCEEC
T ss_pred             HHHHHcCCCCCeeCCCCCCCC--ccCCHHHHHHHHHH-hcCCCCCeeC
Confidence            9999999999999998  999  999999999998 6 8999988875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.55  E-value=2.7e-15  Score=127.43  Aligned_cols=87  Identities=24%  Similarity=0.269  Sum_probs=56.4

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCC--CCC---------------------ccccc--CcCCcccCCchhhhhhhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDD--ECG---------------------KVYEC--RFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~--~~e---------------------KPy~C--~~Cgk~F~~ss~L~~H~r   72 (286)
                      ..|++.|.+...|..|+++|+++++|.|.  .|+                     ++|.|  +.|++.|.....|..|++
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            45666666666666666666666666665  332                     35666  666666666666666666


Q ss_pred             hcCCCcccccCC--CCcccccCCchhhhhcCCCCCCC
Q 040647           73 RHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        73 ~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      +|+++++|+|..  |++  .|.....|.+|++ +|++
T Consensus       128 ~H~~~~~~~C~~~~C~k--~F~~~~~L~~H~~-~H~~  161 (190)
T 1tf6_A          128 SHTQQLPYECPHEGCDK--RFSLPSRLKRHEK-VHAG  161 (190)
T ss_dssp             GGSSSCSSBCCSSSCCC--BCSSHHHHHHHHT-SSCS
T ss_pred             HhCCCCCccCCCCCCCc--hhcCHHHHHHHHH-HhCC
Confidence            666666666655  666  6666666666666 5655

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.55  E-value=3e-16  Score=115.03  Aligned_cols=78  Identities=19%  Similarity=0.336  Sum_probs=72.1

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|++.|.....|..|+++|++++         +|+|.+|++.|.....|.+|+++|+++++|+|..|++  .|...+.|
T Consensus         5 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l   73 (82)
T 2kmk_A            5 KICGKSFKRSSTLSTHLLIHSDTR---------PYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGK--AFSQSSNL   73 (82)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHTCC---------CEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSC--EESSHHHH
T ss_pred             CCCcccccCchhHHHHHHHcCCCC---------CeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcch--hhCChHHH
Confidence            689999999999999999998865         5788899999999999999999999999999999999  99999999


Q ss_pred             hhcCCCCCCC
Q 040647           98 AVQGPPPHLG  107 (286)
Q Consensus        98 ~~H~r~~H~g  107 (286)
                      .+|++ +|++
T Consensus        74 ~~H~~-~H~g   82 (82)
T 2kmk_A           74 ITHSR-KHTG   82 (82)
T ss_dssp             HHHHH-HHC-
T ss_pred             HHHHH-hhCC
Confidence            99998 6653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.4e-15  Score=114.88  Aligned_cols=80  Identities=20%  Similarity=0.259  Sum_probs=73.7

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC--cccccCCCCcccccCCch
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE--RETETLNKARQLVFQHND   95 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge--KPy~C~~Cgr~~sFs~~s   95 (286)
                      ..|++.|.+...|..|+++|++++         +|+|.+|++.|.....|.+|+++|+++  ++|+|..|++  .|.+..
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~--~f~~~~   79 (95)
T 2yt9_A           11 EICGKIFRDVYHLNRHKLSHSGEK---------PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK--GFSRPD   79 (95)
T ss_dssp             SSSCCEESSSHHHHHHHHHSCSSC---------SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCC--CBSSHH
T ss_pred             CCCCCccCChHHHHHHHHhcCCCC---------CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccc--hhCCHH
Confidence            889999999999999999998865         578889999999999999999999997  9999999999  999999


Q ss_pred             hhhhcCCCCCCCC
Q 040647           96 NLAVQGPPPHLGC  108 (286)
Q Consensus        96 ~L~~H~r~~H~g~  108 (286)
                      .|.+|++.+|.++
T Consensus        80 ~L~~H~~~~H~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHTSCCC
T ss_pred             HHHHHHHHhcCCC
Confidence            9999986478754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.7e-15  Score=117.55  Aligned_cols=82  Identities=16%  Similarity=0.179  Sum_probs=75.5

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|++.|.....|..|+++|+           ++|+|.+|++.|.....|.+|++ |+++++|+|..|++  .|.+...|
T Consensus        20 ~~C~~~f~~~~~l~~H~~~H~-----------~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~--~f~~~~~L   85 (107)
T 1wjp_A           20 RLCNAKLSSLLEQGSHERLCR-----------NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMR--TFKSSFSI   85 (107)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHH-----------HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTE--ECSSHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHCC-----------CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccc--hhCCHHHH
Confidence            889999999999999999983           36888999999999999999996 99999999999999  99999999


Q ss_pred             hhcCCCCCCCCCCCCC
Q 040647           98 AVQGPPPHLGCHPMTP  113 (286)
Q Consensus        98 ~~H~r~~H~g~kP~~~  113 (286)
                      ++|++.+|.++++|..
T Consensus        86 ~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCC
Confidence            9999658999998873

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=1.3e-15  Score=115.94  Aligned_cols=76  Identities=22%  Similarity=0.383  Sum_probs=70.2

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCCCCCcccccC--cCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchh
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECR--FCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDN   96 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~   96 (286)
                      .|++.|.....|..|+++|+++++         |+|.  .|++.|.....|.+|+++|+++++|+|.+|++  .|.....
T Consensus        22 ~C~~~f~~~~~l~~H~~~h~~~~~---------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~   90 (100)
T 2ebt_A           22 GCTKVYTKSSHLKAHLRTHTGEKP---------YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNR--SFSRSDH   90 (100)
T ss_dssp             SCCCEESCHHHHHHHHHHHSCCCC---------EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCC--BCSSHHH
T ss_pred             CCCCcccCHHHHHHHHHHhCCCCC---------eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcC--ccCCHHH
Confidence            699999999999999999998765         5664  69999999999999999999999999999999  9999999


Q ss_pred             hhhcCCCCCC
Q 040647           97 LAVQGPPPHL  106 (286)
Q Consensus        97 L~~H~r~~H~  106 (286)
                      |.+|++ +|+
T Consensus        91 l~~H~~-~H~   99 (100)
T 2ebt_A           91 LALHMK-RHQ   99 (100)
T ss_dssp             HHHHHH-HHC
T ss_pred             HHHHHH-HhC
Confidence            999998 665

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.52  E-value=1.9e-15  Score=112.62  Aligned_cols=76  Identities=25%  Similarity=0.432  Sum_probs=69.8

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCCCCCcccccC--cCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchh
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECR--FCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDN   96 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~   96 (286)
                      .|++.|.....|..|+++|+++++         |+|.  .|++.|.....|.+|+++|+++++|+|..|++  .|...+.
T Consensus        12 ~C~~~f~~~~~l~~H~~~h~~~~~---------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~   80 (89)
T 2wbs_A           12 GCGKTYTKSSHLKAHLRTHTGEKP---------YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDR--AFSRSDH   80 (89)
T ss_dssp             TTCCEESSHHHHHHHHTTSCSSCC---------EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSC--EESSHHH
T ss_pred             CCCCcCCCHHHHHHHHHhcCCCCC---------cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCc--ccCCHHH
Confidence            499999999999999999998764         6665  59999999999999999999999999999999  9999999


Q ss_pred             hhhcCCCCCC
Q 040647           97 LAVQGPPPHL  106 (286)
Q Consensus        97 L~~H~r~~H~  106 (286)
                      |..|++ +|.
T Consensus        81 l~~H~~-~H~   89 (89)
T 2wbs_A           81 LALHMK-RHF   89 (89)
T ss_dssp             HHHHGG-GGC
T ss_pred             HHHHHH-hhC
Confidence            999998 663

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2e-15  Score=118.32  Aligned_cols=79  Identities=8%  Similarity=-0.007  Sum_probs=67.8

Q ss_pred             hhcccccCCCchhhhhhhc--cCCCCccCCCCCCcccccCcCCccc--CCchhhhhhhhhcCCCcccccCCCCcccccCC
Q 040647           18 KQVLDESSSTGAGAGHRKK--KSGAKDGKDDECGKVYECRFCSLKF--CKSQALGGHMNRHRQERETETLNKARQLVFQH   93 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~--HtGeKpf~C~~~eKPy~C~~Cgk~F--~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~   93 (286)
                      ..|++.|.+...|..|+++  |.++++        .+.|.+|++.|  .....|.+|+++|+++++|+|.+|++  .|.+
T Consensus        23 ~~C~k~f~~~~~L~~H~~~~~h~~~~~--------~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k--~f~~   92 (115)
T 2dmi_A           23 KDCSAAYDTLVELTVHMNETGHYRDDN--------HETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGH--SFES   92 (115)
T ss_dssp             SSSSCEESSHHHHHHHHHHTCCCBCSC--------CCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCC--BCSS
T ss_pred             CccCchhcCHHHHHHHHHHhCccccCC--------CccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCC--ccCC
Confidence            7888999998999999888  555443        34588999998  89999999999999999999999999  9999


Q ss_pred             chhhhhcCCCCCCC
Q 040647           94 NDNLAVQGPPPHLG  107 (286)
Q Consensus        94 ~s~L~~H~r~~H~g  107 (286)
                      ...|++|++ .|..
T Consensus        93 ~~~L~~H~~-~hh~  105 (115)
T 2dmi_A           93 LQDLSVHMI-KTKH  105 (115)
T ss_dssp             HHHHHHHHH-HTTT
T ss_pred             HHHHHHHHH-HhCC
Confidence            999999998 5543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=3e-15  Score=115.51  Aligned_cols=79  Identities=13%  Similarity=0.170  Sum_probs=70.5

Q ss_pred             cccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccC-CchhhhhhhhhcCC-CcccccCCCCcccccCCchhhhh
Q 040647           22 DESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFC-KSQALGGHMNRHRQ-ERETETLNKARQLVFQHNDNLAV   99 (286)
Q Consensus        22 k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~-~ss~L~~H~r~Htg-eKPy~C~~Cgr~~sFs~~s~L~~   99 (286)
                      ..+.....+..|+++|++++         +|+|.+|++.|. ....|.+|+++|++ +++|+|.+|++  .|.+...|++
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~---------~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k--~F~~~~~L~~   72 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERG---------EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRK--QFKSKAGLNY   72 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTS---------CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCC--CCSCHHHHHH
T ss_pred             CCCCCCCcHHHHHHHhccCC---------CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCC--ccCCHHHHHH
Confidence            34566677889999999876         567788999999 99999999999999 99999999999  9999999999


Q ss_pred             cCCCCCCCCCCCC
Q 040647          100 QGPPPHLGCHPMT  112 (286)
Q Consensus       100 H~r~~H~g~kP~~  112 (286)
                      |++ +|++++|..
T Consensus        73 H~~-~h~~~kp~~   84 (98)
T 2gqj_A           73 HTM-AEHSAKPSD   84 (98)
T ss_dssp             HHH-HHSCSCSSC
T ss_pred             HHH-HHcCCCCCC
Confidence            999 888888765

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.3e-15  Score=122.30  Aligned_cols=86  Identities=19%  Similarity=0.231  Sum_probs=79.0

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCC--CC-------------------cccccCc--CCcccCCchhhhhhh-hh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDE--CG-------------------KVYECRF--CSLKFCKSQALGGHM-NR   73 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~--~e-------------------KPy~C~~--Cgk~F~~ss~L~~H~-r~   73 (286)
                      ..|++.|.+...|..|+++|+++++|.|.+  |+                   ++|+|++  |++.|.+...|.+|+ ++
T Consensus        43 ~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           43 SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             cchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence            566799999999999999999999999974  55                   6899998  999999999999999 89


Q ss_pred             cCCCcccccCC--CCcccccCCchhhhhcCCCCCC
Q 040647           74 HRQERETETLN--KARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        74 HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      |+++++|+|..  |++  .|.....|.+|++ +|.
T Consensus       123 H~~~~~~~C~~~~C~~--~f~~~~~L~~H~~-~hh  154 (155)
T 2gli_A          123 HSNEKPYVCKLPGCTK--RYTDPSSLRKHVK-TVH  154 (155)
T ss_dssp             TCSCCCEECCSTTTCC--EESSHHHHHHHHH-HSC
T ss_pred             cCCCCCeeCCCCCCcc--ccCCHHHHHHHHH-hhc
Confidence            99999999998  999  9999999999998 554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.51  E-value=5.1e-15  Score=125.72  Aligned_cols=93  Identities=19%  Similarity=0.232  Sum_probs=86.6

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCC--CCCC-------------------cccccC--cCCcccCCchhhhhhh-hh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKD--DECG-------------------KVYECR--FCSLKFCKSQALGGHM-NR   73 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C--~~~e-------------------KPy~C~--~Cgk~F~~ss~L~~H~-r~   73 (286)
                      ..|++.|.+...|..|+++|+++++|.|  ++|+                   ++|.|+  .|++.|.....|.+|+ +.
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~   97 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF   97 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTT
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHh
Confidence            5899999999999999999999999999  6655                   689999  8999999999999999 78


Q ss_pred             c-CCCccccc--CCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           74 H-RQERETET--LNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        74 H-tgeKPy~C--~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      | .++++|.|  ..|++  .|.....|..|++ +|.++++|.+
T Consensus        98 h~~~~~~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C  137 (190)
T 1tf6_A           98 HNIKICVYVCHFENCGK--AFKKHNQLKVHQF-SHTQQLPYEC  137 (190)
T ss_dssp             SSTTTSCCEECSSSSCE--ECSSHHHHHHHHG-GGSSSCSSBC
T ss_pred             cCCCcceeeCCCCCCcc--ccCCHHHHHHHHH-HhCCCCCccC
Confidence            8 57899999  89999  9999999999999 8999999986

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=1.4e-14  Score=110.77  Aligned_cols=60  Identities=13%  Similarity=0.115  Sum_probs=55.7

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      .+++|.|++|+|.|.+...|.+|+++|+++|||+|.+|++  .|.+.+.|++|++++|+.|.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPA--TFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSC--EESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCC--EeCCHHHHHHhCcccCcCCC
Confidence            4678999999999999999999999999999999999999  99999999999765898764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.7e-14  Score=105.63  Aligned_cols=62  Identities=23%  Similarity=0.386  Sum_probs=58.4

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+|+|++|++.|.....|.+|+++|+++++|+|..|++  .|.....|.+|++ +|++++||.|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~L~~H~~-~H~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGK--AFIQRSHLIGHHR-VHTGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCC--EESSHHHHHHHGG-GSCCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCC--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            457888999999999999999999999999999999999  9999999999999 9999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=7e-15  Score=114.27  Aligned_cols=76  Identities=22%  Similarity=0.262  Sum_probs=70.9

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhh
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLA   98 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~   98 (286)
                      .|++.|.+...|..|+++|++++         +|+|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|.
T Consensus        14 ~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~   82 (110)
T 2csh_A           14 QCGKSFTHKSQRDRHMSMHLGLR---------PYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK--RFMWRDSFH   82 (110)
T ss_dssp             TTSCEESSHHHHHHHHHHHSCCC---------SEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCC--EESCHHHHH
T ss_pred             cCCCccCCHHHHHHHHHHcCCCc---------CccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcc--hhcCHHHHH
Confidence            69999999999999999999865         5788899999999999999999999999999999999  999999999


Q ss_pred             hcCCCCCC
Q 040647           99 VQGPPPHL  106 (286)
Q Consensus        99 ~H~r~~H~  106 (286)
                      +|++ .|.
T Consensus        83 ~H~~-~~~   89 (110)
T 2csh_A           83 RHVT-SCT   89 (110)
T ss_dssp             HHHH-HHH
T ss_pred             HHHH-Hcc
Confidence            9998 554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.3e-14  Score=106.34  Aligned_cols=72  Identities=22%  Similarity=0.391  Sum_probs=62.7

Q ss_pred             hhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhh-hcCCC-cccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           29 AGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMN-RHRQE-RETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        29 ~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r-~Htge-KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      .|.+|+++|+++|         +|+|++|++.|.....|.+|++ .|+++ ++|+|..|++  .|.....|.+|++..|.
T Consensus         2 s~~~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~--~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRTHSGEK---------PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDT--VIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCSCCC---------SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSC--EESSHHHHHHHHHHTSC
T ss_pred             CCCccccccCCCC---------CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCC--ccCCHHHHHHHHHHhCC
Confidence            4678999999876         5788899999999999999997 78875 9999999999  99999999999995566


Q ss_pred             CCCCC
Q 040647          107 GCHPM  111 (286)
Q Consensus       107 g~kP~  111 (286)
                      .+.|.
T Consensus        71 ~~~p~   75 (77)
T 2ct1_A           71 YSGPS   75 (77)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            66553

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=1.2e-14  Score=105.75  Aligned_cols=61  Identities=25%  Similarity=0.349  Sum_probs=56.8

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPM  111 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~  111 (286)
                      .+++|+|..|++.|.....|.+|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGA--QFNRPANLKTHTR-IHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCC--EESCHHHHHHHHH-HHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCc--hhCCHHHHHHHHH-hcCCCCCC
Confidence            3567888999999999999999999999999999999999  9999999999999 89999886

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.4e-14  Score=104.43  Aligned_cols=74  Identities=18%  Similarity=0.318  Sum_probs=65.9

Q ss_pred             hhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC----cccccCCCCcccccCCchhhhhcCCCC
Q 040647           29 AGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE----RETETLNKARQLVFQHNDNLAVQGPPP  104 (286)
Q Consensus        29 ~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge----KPy~C~~Cgr~~sFs~~s~L~~H~r~~  104 (286)
                      .|.+|+++|+++|         +|+|.+|++.|.....|.+|+++|..+    ++|+|..|++  .|.....|.+|++ +
T Consensus         2 s~~~H~~~H~~~k---------~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~--~f~~~~~L~~H~~-~   69 (86)
T 1x6h_A            2 SSGSSGRTHTGEK---------PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGK--TFTRRNTMARHAD-N   69 (86)
T ss_dssp             TTTCCSTTCCCCC---------CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCC--EESCHHHHHHHHH-H
T ss_pred             CcccccceecCCC---------CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCC--hhCCHHHHHHHHH-H
Confidence            5778999999866         578889999999999999999877765    8999999999  9999999999999 8


Q ss_pred             CCCCCCCCCC
Q 040647          105 HLGCHPMTPG  114 (286)
Q Consensus       105 H~g~kP~~~~  114 (286)
                      |.+++++.+.
T Consensus        70 h~~~~~~~~~   79 (86)
T 1x6h_A           70 CAGPDGVEGE   79 (86)
T ss_dssp             CCCCCSCCCC
T ss_pred             ccCCCCcccC
Confidence            9999888754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=3e-14  Score=110.47  Aligned_cols=77  Identities=8%  Similarity=0.005  Sum_probs=67.9

Q ss_pred             ccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCccc-CCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhh
Q 040647           21 LDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKF-CKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAV   99 (286)
Q Consensus        21 ~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F-~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~   99 (286)
                      ...|.....|..|+++|++++         +|+|++|++.| ....+|+.|+++| ++++|+|.+|++  .|.+...|++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~---------~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk--~F~~~~~L~~   80 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKG---------SVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGK--QLRSLAGMKY   80 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTS---------CEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCC--CCSSHHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCC---------CcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCC--eeCCHHHHHH
Confidence            345677788999999998765         57888999999 9999999999999 999999999999  9999999999


Q ss_pred             c-CCCCCCCCCC
Q 040647          100 Q-GPPPHLGCHP  110 (286)
Q Consensus       100 H-~r~~H~g~kP  110 (286)
                      | ++ +|+++..
T Consensus        81 H~~~-~H~~~p~   91 (96)
T 2ctd_A           81 HVMA-NHNSLPS   91 (96)
T ss_dssp             HHHH-HTCCCSS
T ss_pred             HhHH-hcCCCCC
Confidence            9 87 8886543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.42  E-value=6.2e-15  Score=121.09  Aligned_cols=74  Identities=18%  Similarity=0.182  Sum_probs=67.6

Q ss_pred             chhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           28 GAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        28 s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ..+..|+++|+|||         +|+|++|++.|.....|.+|+++|+++|+|+|..|++  .|.+...|..|++ +|++
T Consensus         8 ~h~~h~~~~h~Gek---------~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~   75 (133)
T 2lt7_A            8 KHDDHYELIVDGRV---------YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEK--VFPLAEYRTKHEI-HHTG   75 (133)
T ss_dssp             CCSSEEEEEETTEE---------EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSC--EESSHHHHHHHHH-HHHT
T ss_pred             HHHhhceeecCCCc---------CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCe--ecccccchhhhcc-ccCC
Confidence            34566778898865         6888999999999999999999999999999999999  9999999999999 9999


Q ss_pred             CCCCCC
Q 040647          108 CHPMTP  113 (286)
Q Consensus       108 ~kP~~~  113 (286)
                      +++|.|
T Consensus        76 ~k~~~C   81 (133)
T 2lt7_A           76 ERRYQC   81 (133)
T ss_dssp             CCCEEE
T ss_pred             CccccC
Confidence            999975

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=5.2e-14  Score=102.80  Aligned_cols=64  Identities=19%  Similarity=0.148  Sum_probs=56.6

Q ss_pred             hhcccccCCCchhhhhhh-ccCCCCccCCCCCCcccccCc--CCcccCCchhhhhhhhhcCCCcccccCCCCcccccC
Q 040647           18 KQVLDESSSTGAGAGHRK-KKSGAKDGKDDECGKVYECRF--CSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQ   92 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r-~HtGeKpf~C~~~eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs   92 (286)
                      ++|++.|.+...|..|++ +|++++         +|+|++  |++.|.....|.+|+++|+++++|+|..|++  .|.
T Consensus        13 ~~C~~~f~~~~~L~~H~~~~H~~~~---------~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k--~F~   79 (79)
T 2dlk_A           13 PGCGRIFSNRQYLNHHKKYQHIHQK---------SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP--SSG   79 (79)
T ss_dssp             TTTCCEESSHHHHHHHHHHGGGSCC---------CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC--CCC
T ss_pred             CCCcCccCCHHHHHHHHHHHhCCCC---------CeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC--CCC
Confidence            569999999999999998 798866         467777  9999999999999999999999999999999  774

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.41  E-value=4.2e-14  Score=101.37  Aligned_cols=52  Identities=15%  Similarity=0.269  Sum_probs=48.4

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      ++|++.|.+...|.+|+++|+|+|         ||+|.+|+++|.+.++|.+|+++|++|+
T Consensus         8 ~~C~k~F~~~~~L~~H~~~Ht~ek---------p~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            8 NFCGKTYRDASGLSRHRRAHLGYR---------PRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHTCC---------CEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCCEeCCHHHHHHHHHHhCCCc---------CeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            899999999999999999999976         5788899999999999999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.2e-14  Score=103.04  Aligned_cols=65  Identities=26%  Similarity=0.366  Sum_probs=58.8

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +.++|++++         +|+|++|++.|.....|.+|+++|+++++|+|..|++  .|.....|++|++ +|+++.
T Consensus         5 ~~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~--~f~~~~~L~~H~~-~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEK---------PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGK--AFSQNSGLINHQR-IHTSGP   69 (72)
T ss_dssp             CCCTTTTCC---------CEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCC--EESSHHHHHHHHH-HHHSSS
T ss_pred             CCcccCCCC---------CccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCc--ccCCHHHHHHHHH-hcCCCC
Confidence            567888765         5788899999999999999999999999999999999  9999999999999 787654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.2e-14  Score=101.21  Aligned_cols=61  Identities=20%  Similarity=0.139  Sum_probs=56.7

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      +|+|+|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|.+|++ +|.+++|..
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~--~f~~~~~L~~H~~-~h~~~~p~p   67 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSF--DTKQPSNLSKHMK-KFHGDMSGP   67 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSC--EESSHHHHHHHHH-HHHSSSCCS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCC--ccCCHHHHHHHHH-HHhCCCCCC
Confidence            467899999999999999999999999999999999999  9999999999999 888887654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=2.9e-13  Score=94.04  Aligned_cols=57  Identities=23%  Similarity=0.398  Sum_probs=52.9

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      |||+|++|++.|.....|.+|+++|+++++|+|..|++  .|.+.+.|.+|++.+|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNR--AFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCC--EESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCC--ccCCHHHHHHHHHHHcCCc
Confidence            58999999999999999999999999999999999999  9999999999964388764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2e-13  Score=100.00  Aligned_cols=62  Identities=15%  Similarity=0.243  Sum_probs=55.7

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCC---CcccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQ---ERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Htg---eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      +|+|+|++|++.|.....|.+|+++|++   +++|+|..|++  .|...+.|.+|++..|.++++..
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k--~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGK--RFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCC--EESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCc--hhCCHHHHHHHHHHhCCCCCCCc
Confidence            4568889999999999999999999996   89999999999  99999999999965888777654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.4e-13  Score=108.65  Aligned_cols=64  Identities=16%  Similarity=0.223  Sum_probs=56.7

Q ss_pred             CCcccccCcCCcccCCchhhhhhhh-hc---CCCcccccCCCCcccccCCchhhhhc-CCCCCCCCCCCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMN-RH---RQERETETLNKARQLVFQHNDNLAVQ-GPPPHLGCHPMTPG  114 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r-~H---tgeKPy~C~~Cgr~~sFs~~s~L~~H-~r~~H~g~kP~~~~  114 (286)
                      ++|||+|..|++.|...+.|.+|++ +|   +++++|+|..|++  .|...+.|.+| ++ +|++++||.|.
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk--~F~~~~~L~~H~~r-~Htgekpy~C~   83 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNF--LTKRYDALSEHNLK-YHPGEENFKLT   83 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTE--EESSTHHHHTHHHH-TSTTCCCEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCc--ccCCHHHHHHHHHH-hcCCCCCeeCC
Confidence            5678899999999999999999997 59   6689999999999  99999999999 77 89999998864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.33  E-value=3.9e-13  Score=92.28  Aligned_cols=56  Identities=20%  Similarity=0.292  Sum_probs=52.1

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      ||+|++|++.|.....|..|+++|+++++|+|..|++  .|...+.|.+|++ +|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNF--SFKTKGNLTKHMK-SKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSC--EESSHHHHHHHHH-SSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCc--hhcCHHHHHHHHH-HhcccC
Confidence            6899999999999999999999999999999999999  9999999999999 777664

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.33  E-value=1.3e-13  Score=94.70  Aligned_cols=54  Identities=19%  Similarity=0.236  Sum_probs=48.9

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      +|+|+|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|.+|++ +|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h   55 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEY--AAAQKTSLRYHLE-RH   55 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSC--EESSHHHHHHHHH-HH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcc--hhCCHHHHHHHHH-Hh
Confidence            578999999999999999999999999999999999999  9999999999988 44

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.32  E-value=1.5e-13  Score=100.98  Aligned_cols=71  Identities=14%  Similarity=0.078  Sum_probs=66.3

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCc--CCcccCCchhhhhhhhhcCCCcccccCC---CCcccccC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRF--CSLKFCKSQALGGHMNRHRQERETETLN---KARQLVFQ   92 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeKPy~C~~---Cgr~~sFs   92 (286)
                      +.|++.|.+...|..|+++|++++         +|+|++  |++.|.....|.+|+++|++   |.|..   |++  .|.
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~--~f~   72 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQL---------PYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSF--VGK   72 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTC---------CEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCC--EES
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCC---------CeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCC--ccC
Confidence            679999999999999999999866         577777  99999999999999999999   99999   999  999


Q ss_pred             CchhhhhcCC
Q 040647           93 HNDNLAVQGP  102 (286)
Q Consensus        93 ~~s~L~~H~r  102 (286)
                      ....|.+|++
T Consensus        73 ~~~~l~~H~~   82 (85)
T 2j7j_A           73 TWTLYLKHVA   82 (85)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999987

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=9.6e-13  Score=96.19  Aligned_cols=56  Identities=23%  Similarity=0.382  Sum_probs=52.8

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      ..|++.|.....|..|+++|++++         +|+|.+|++.|.....|.+|+++|++++||+|
T Consensus        22 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           22 DECGKSFSHSSDLSKHRRTHTGEK---------PYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SSSCCBCSCHHHHHHHHTTTCCSC---------SEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCcccCCHHHHHHHHHHcCCCc---------CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            899999999999999999999865         57888999999999999999999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.9e-13  Score=96.09  Aligned_cols=69  Identities=16%  Similarity=0.255  Sum_probs=59.5

Q ss_pred             CCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCC
Q 040647           26 STGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        26 ~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      ++..|..|+++|++++         +|.|++|++.|.....|..       +++|+|..|++  .|.+.+.|.+|++ +|
T Consensus         2 ~~~~l~~H~~~h~~~~---------~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~--~f~~~~~l~~H~~-~H   62 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDR---------SQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRK--DSCQEAALNKDEG-NE   62 (73)
T ss_dssp             CCCSCCCCCCCCCCCS---------EEECSSSCCEEECCCCCCC-------SSSCCCHHHHH--TCSCCCSSCCCSS-CC
T ss_pred             cchhHHHHHHHhCCCC---------CeeCCcccchhCCHHHhCc-------CCCCCCCCCCh--hhcCHHHHHHHHH-hh
Confidence            4578999999999866         5777888899998888876       78999999999  9999999999998 89


Q ss_pred             CCCCCCCC
Q 040647          106 LGCHPMTP  113 (286)
Q Consensus       106 ~g~kP~~~  113 (286)
                      .++++|.+
T Consensus        63 ~~~~~~~C   70 (73)
T 2ctu_A           63 SGKKTSGP   70 (73)
T ss_dssp             CCCCCSSC
T ss_pred             cCCCCCCC
Confidence            99888875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.27  E-value=5.4e-13  Score=104.14  Aligned_cols=74  Identities=26%  Similarity=0.418  Sum_probs=68.0

Q ss_pred             cCCCCccCCCC--CC-------------------cccccC--cCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCC
Q 040647           37 KSGAKDGKDDE--CG-------------------KVYECR--FCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQH   93 (286)
Q Consensus        37 HtGeKpf~C~~--~e-------------------KPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~   93 (286)
                      ++++++|.|.+  |+                   ++|.|.  .|++.|.+...|..|+++|+++++|+|..|++  .|..
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~   78 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQR--KFSR   78 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCC--EESC
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCc--hhCC
Confidence            36788999985  65                   689999  79999999999999999999999999999999  9999


Q ss_pred             chhhhhcCCCCCCCCCCCCC
Q 040647           94 NDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        94 ~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ...|.+|++ +|.++++|.+
T Consensus        79 ~~~l~~H~~-~h~~~~~~~C   97 (119)
T 2jp9_A           79 SDHLKTHTR-THTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHH-HHHTCCCEEC
T ss_pred             HHHHHHHHH-HhcCCCCeeC
Confidence            999999999 8999998875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=2e-12  Score=97.48  Aligned_cols=65  Identities=18%  Similarity=0.175  Sum_probs=52.3

Q ss_pred             hhcccccCCCchhhhhhhc-cCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           18 KQVLDESSSTGAGAGHRKK-KSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~-HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      ..|++.|.+...|.+|+++ |+++++..+..| +.|.|.+|++.|.....|.+|+++|+++|||+|.
T Consensus        29 ~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-CCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccccccCCHHHHHHHHHHhccCCCCCCccce-eccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788888888888888887 888776544333 3478888888888888888888888888888885

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=6.5e-13  Score=93.98  Aligned_cols=61  Identities=20%  Similarity=0.299  Sum_probs=53.2

Q ss_pred             hhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhh-c-CCCcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           34 RKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNR-H-RQERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        34 ~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~-H-tgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      +++|++++         +|+|+.|++.|.....|.+|+++ | +++++|+|..|++  .|...+.|.+|++ .|.
T Consensus         2 ~~~h~~~k---------~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k--~f~~~~~L~~H~~-~~H   64 (66)
T 2drp_A            2 EFTKEGEH---------TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFK--EFTRKDNMTAHVK-IIH   64 (66)
T ss_dssp             -CEEEETT---------EEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCC--EESCHHHHHHHHH-HHT
T ss_pred             ccccCCCc---------ceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCC--ccCCHHHHHHHHH-HHc
Confidence            35677755         68888999999999999999998 8 6999999999999  9999999999988 443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.24  E-value=6.9e-13  Score=105.88  Aligned_cols=70  Identities=13%  Similarity=0.118  Sum_probs=60.1

Q ss_pred             cCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCC
Q 040647           24 SSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPP  103 (286)
Q Consensus        24 F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~  103 (286)
                      |.....|..|+ +|+++|         ||.|++|++.|.....|.+|+++|  +++|+|..|++  .|.+.+.|.+|++ 
T Consensus        57 ~~~~~~l~~h~-~h~~~~---------~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k--~f~~~~~l~~H~~-  121 (129)
T 2wbt_A           57 LDESSYLYRLL-ASKAIS---------QFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKK--EFTSTDSALDHVC-  121 (129)
T ss_dssp             TTTHHHHHHHH-HHHHHC---------SEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCC--BCSSHHHHHHHHH-
T ss_pred             cCCHHHHHHHH-HhCCCC---------CeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCc--ccCCHHHHHHHHH-
Confidence            34556677776 688765         678889999999999999999999  99999999999  9999999999999 


Q ss_pred             CCCCC
Q 040647          104 PHLGC  108 (286)
Q Consensus       104 ~H~g~  108 (286)
                      +|++.
T Consensus       122 ~h~~~  126 (129)
T 2wbt_A          122 KKHNI  126 (129)
T ss_dssp             HTTCC
T ss_pred             HHCCc
Confidence            67653

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=4.4e-12  Score=83.68  Aligned_cols=45  Identities=24%  Similarity=0.445  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|+++|         +|+|++|++.|.+.+.|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEK---------TWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCC---------CCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCc---------CeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            5889999876         57778899999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.23  E-value=1.1e-13  Score=103.72  Aligned_cols=75  Identities=16%  Similarity=0.235  Sum_probs=68.8

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhh
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNL   97 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L   97 (286)
                      ..|++.|.+...|..|+++|++++         +|+|++|++.|.....|.+|+++|.+ ++|.|..|++  .|.....|
T Consensus         7 ~~C~k~f~~~~~L~~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~--~f~~~~~L   74 (88)
T 1llm_C            7 RICMRNFSRSDHLTTHIRTHTGEK---------PFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEE--LLSKNYHL   74 (88)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCCC---------CEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHH--HHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCC---------CccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHH--HHHHHhhh
Confidence            789999999999999999999866         57888999999999999999999985 8999999999  99999999


Q ss_pred             hhcCCCC
Q 040647           98 AVQGPPP  104 (286)
Q Consensus        98 ~~H~r~~  104 (286)
                      ..|++..
T Consensus        75 ~~H~~~~   81 (88)
T 1llm_C           75 ENEVARL   81 (88)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998733

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.3e-12  Score=83.74  Aligned_cols=45  Identities=22%  Similarity=0.413  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKK---------PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCS---------SCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCc---------CeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            5889999876         57778899999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=83.55  Aligned_cols=45  Identities=22%  Similarity=0.454  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEK---------LYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCC---------CCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCC---------CeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            5899999876         57778899999999999999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.22  E-value=3.2e-12  Score=104.72  Aligned_cols=67  Identities=21%  Similarity=0.349  Sum_probs=62.8

Q ss_pred             hhhcccccCCCchhhhhhhccCCCCccCCCC--CC-------------------cccccCc--CCcccCCchhhhhhhhh
Q 040647           17 SKQVLDESSSTGAGAGHRKKKSGAKDGKDDE--CG-------------------KVYECRF--CSLKFCKSQALGGHMNR   73 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~--~e-------------------KPy~C~~--Cgk~F~~ss~L~~H~r~   73 (286)
                      +..|++.|.....|..|+++|+++++|.|.+  |+                   ++|+|.+  |++.|.....|.+|+++
T Consensus        65 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A           65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             CTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             CCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence            3889999999999999999999999999986  66                   5899997  99999999999999999


Q ss_pred             cCCCcccccC
Q 040647           74 HRQERETETL   83 (286)
Q Consensus        74 HtgeKPy~C~   83 (286)
                      |+++|+|+|.
T Consensus       145 H~~~k~~~c~  154 (155)
T 2rpc_A          145 HTSDKSGPSS  154 (155)
T ss_dssp             TTSCCCSCSC
T ss_pred             hcCCCCCCCC
Confidence            9999999985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.22  E-value=3.2e-12  Score=100.19  Aligned_cols=74  Identities=23%  Similarity=0.336  Sum_probs=67.1

Q ss_pred             CCCCccCCCCCC-------------------cccccCcCCcccCCchhhhhhhhh---cCCCcccccCCCCcccccCCch
Q 040647           38 SGAKDGKDDECG-------------------KVYECRFCSLKFCKSQALGGHMNR---HRQERETETLNKARQLVFQHND   95 (286)
Q Consensus        38 tGeKpf~C~~~e-------------------KPy~C~~Cgk~F~~ss~L~~H~r~---HtgeKPy~C~~Cgr~~sFs~~s   95 (286)
                      +++++|.|.+|+                   ++|+|++|++.|.....|.+|++.   |.++++|.|..|++  .|....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~--~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQE--TFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCC--EESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCC--ccCCHH
Confidence            678899998865                   689999999999999999999985   68899999999999  999999


Q ss_pred             hhhhcCCCCCCCCCCCCCC
Q 040647           96 NLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        96 ~L~~H~r~~H~g~kP~~~~  114 (286)
                      .|.+|++ +|.++++|.|.
T Consensus        81 ~l~~H~~-~h~~~~~~~C~   98 (124)
T 2dlq_A           81 ELRLHMV-SHTGEMPYKCS   98 (124)
T ss_dssp             HHHHHHH-HHSSSCSEECS
T ss_pred             HHHHHHH-HcCCCCCccCC
Confidence            9999999 89999998863

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=83.72  Aligned_cols=45  Identities=27%  Similarity=0.467  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEK---------PYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCC---------SEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCc---------CcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.6e-12  Score=83.59  Aligned_cols=45  Identities=24%  Similarity=0.460  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEK---------PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCC---------SEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCC---------CeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            5899999866         57888999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.22  E-value=4.6e-12  Score=83.42  Aligned_cols=45  Identities=20%  Similarity=0.329  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+.+.|.+|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVK---------PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCC---------SEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCC---------ceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.22  E-value=4.6e-12  Score=83.71  Aligned_cols=45  Identities=24%  Similarity=0.439  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEK---------PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSC---------SCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCC---------ceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5899999876         57778899999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=83.78  Aligned_cols=45  Identities=20%  Similarity=0.334  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEK---------PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCC---------SEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCc---------CeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5899999866         57888999999999999999999999999999886

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.3e-12  Score=83.14  Aligned_cols=45  Identities=24%  Similarity=0.312  Sum_probs=40.7

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEK---------PHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCC---------SCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCC---------CeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57778899999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.21  E-value=4.2e-12  Score=92.06  Aligned_cols=57  Identities=25%  Similarity=0.465  Sum_probs=52.0

Q ss_pred             chh-hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccc
Q 040647           15 DYS-KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERET   80 (286)
Q Consensus        15 e~~-~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy   80 (286)
                      .|. ..|++.|.+...|..|+++|++++         +|+|.+|++.|.+...|.+|+++|+++|||
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEK---------PYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCC---------SEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCC---------CEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            344 899999999999999999999866         578889999999999999999999999986

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.5e-12  Score=83.47  Aligned_cols=45  Identities=20%  Similarity=0.390  Sum_probs=41.2

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+.+.|.+|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEK---------PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCC---------SSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCC---------CeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=83.59  Aligned_cols=45  Identities=20%  Similarity=0.321  Sum_probs=41.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGER---------PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCC---------SEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCC---------CeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5899999866         57888999999999999999999999999999987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.21  E-value=8.4e-12  Score=95.89  Aligned_cols=64  Identities=27%  Similarity=0.332  Sum_probs=60.2

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      .+++|.|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|.+|++ +|.++++|.|.
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   77 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHK--AFRRQDHLRDHRY-IHSKEKPFKCQ   77 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCC--BCSCHHHHHHHGG-GSCCCCTTSCS
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccc--hhCCHHHHHHHHH-HhCCCCCeECC
Confidence            3578999999999999999999999999999999999999  9999999999999 89999999863

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.7e-12  Score=82.96  Aligned_cols=45  Identities=22%  Similarity=0.442  Sum_probs=40.7

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEK---------PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCC---------TTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCc---------CcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5889999876         56778899999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.4e-12  Score=83.24  Aligned_cols=45  Identities=22%  Similarity=0.495  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEK---------PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSC---------SCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCC---------CcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57778899999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.6e-12  Score=82.93  Aligned_cols=45  Identities=20%  Similarity=0.294  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+|
T Consensus         2 ~h~~~h~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEK---------PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCS---------SCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCC---------CeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4889999876         57778899999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.21  E-value=4.6e-12  Score=83.57  Aligned_cols=45  Identities=22%  Similarity=0.440  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEK---------RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSC---------CEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCc---------CcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.21  E-value=6.1e-12  Score=83.10  Aligned_cols=45  Identities=22%  Similarity=0.402  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEK---------PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCC---------SBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCC---------CcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4889999876         57778899999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.1e-12  Score=82.97  Aligned_cols=45  Identities=20%  Similarity=0.374  Sum_probs=40.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEK---------PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCC---------SBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCC---------CeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4889999876         57778899999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=83.50  Aligned_cols=45  Identities=22%  Similarity=0.390  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+.+.|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEK---------PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSS---------SEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCC---------CeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.8e-12  Score=83.63  Aligned_cols=45  Identities=20%  Similarity=0.293  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTK---------SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSC---------SEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCC---------CeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5889998865         57888999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.5e-12  Score=83.32  Aligned_cols=45  Identities=22%  Similarity=0.424  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGK---------HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSC---------CEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCC---------CeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4889999866         57888999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.7e-12  Score=83.13  Aligned_cols=45  Identities=18%  Similarity=0.351  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEK---------PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCC---------SEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCC---------CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.6e-12  Score=83.01  Aligned_cols=45  Identities=27%  Similarity=0.421  Sum_probs=41.2

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEK---------PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCC---------SEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCC---------CeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5899999866         57888999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.6e-12  Score=84.22  Aligned_cols=45  Identities=24%  Similarity=0.465  Sum_probs=41.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+.+.|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGER---------PYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCC---------CEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCC---------CEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999866         57888999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.3e-12  Score=82.74  Aligned_cols=45  Identities=24%  Similarity=0.374  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEK---------PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCC---------SCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCC---------CccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5899999866         57778899999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6e-12  Score=82.85  Aligned_cols=45  Identities=20%  Similarity=0.377  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEK---------PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCC---------SEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCC---------CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=6.4e-12  Score=82.71  Aligned_cols=45  Identities=22%  Similarity=0.377  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEK---------PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCC---------SEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCc---------CeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.5e-12  Score=83.20  Aligned_cols=45  Identities=22%  Similarity=0.395  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+.+.|.+|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEK---------PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCC---------CEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCC---------CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5888998866         57888999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.6e-12  Score=82.99  Aligned_cols=45  Identities=27%  Similarity=0.364  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEK---------SHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCS---------SEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCC---------CeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5889999866         57788899999999999999999999999999987

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.20  E-value=4.2e-12  Score=95.72  Aligned_cols=63  Identities=16%  Similarity=0.192  Sum_probs=59.3

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +++|+|.+|++.|.....|..|+++|+++++|+|..|++  .|.....|.+|++ +|.++++|.|.
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   68 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDY--AAADSSSLNKHLR-IHSDERPFKCQ   68 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCC--EESSHHHHHHHHH-HSCCCCCEECS
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCC--ccCCHHHHHHHHH-HhCCCCCccCC
Confidence            568999999999999999999999999999999999999  9999999999999 89999998863

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8e-12  Score=82.54  Aligned_cols=45  Identities=24%  Similarity=0.379  Sum_probs=40.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|++++         +|+|++|++.|.+.+.|.+|+++|+++|+|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEK---------PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCC---------SCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCC---------CcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4888999876         57778899999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.6e-12  Score=82.79  Aligned_cols=45  Identities=22%  Similarity=0.343  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEK---------PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCC---------SEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCc---------CccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4888999866         57888999999999999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=2.9e-12  Score=93.38  Aligned_cols=63  Identities=17%  Similarity=0.269  Sum_probs=56.8

Q ss_pred             CcccccCc--CCcccCCchhhhhhhh-hcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMN-RHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r-~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +++|.|..  |++.|.+...|.+|++ +|+++++|+|..  |++  .|.....|.+|++ +|.++++|.+.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C~   72 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGK--SFNFKKHLKEHMK-LHSDTRDYICE   72 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCC--EESSHHHHHHHHH-HHHTSCCCSCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcC--ccCCHHHHHHHHH-HhCCCCCeeCC
Confidence            34566665  9999999999999999 799999999999  999  9999999999999 99999999853

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.8e-12  Score=83.48  Aligned_cols=45  Identities=20%  Similarity=0.386  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEK---------PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCS---------SEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCC---------CeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=83.14  Aligned_cols=45  Identities=24%  Similarity=0.424  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEK---------PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSC---------SEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCC---------CEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=82.87  Aligned_cols=45  Identities=22%  Similarity=0.443  Sum_probs=41.2

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEK---------PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCC---------SEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCC---------CeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5899999866         57888999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=83.16  Aligned_cols=45  Identities=22%  Similarity=0.417  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGEN---------PYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSC---------CEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCc---------CcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889998866         57888999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=82.69  Aligned_cols=45  Identities=22%  Similarity=0.366  Sum_probs=40.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEK---------PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCC---------SEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCC---------CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57888899999999999999999999999999875

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.19  E-value=7.4e-12  Score=82.69  Aligned_cols=45  Identities=20%  Similarity=0.356  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~h~~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVN---------PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCC---------SEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCC---------CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4888999866         57888999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=6.2e-12  Score=82.16  Aligned_cols=44  Identities=23%  Similarity=0.382  Sum_probs=40.1

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      |+++|+++|         +|+|++|++.|.+.+.|.+|+++|+++++|+|..|
T Consensus         1 H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEK---------PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCC---------CEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCc---------CccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            678898866         57888999999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.4e-12  Score=90.38  Aligned_cols=58  Identities=9%  Similarity=0.099  Sum_probs=53.6

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccC-CCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL-NKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~-~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      .+|||+|++|++.|. ...|..|+++ ++++||+|. .|++  .|...+.|..|++ +|...++
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k--~f~~~~~L~~H~~-~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGV--GTVAREDLPGHLK-DSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSC--CEEETTTHHHHHH-TTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCc--ccccHHHHHHHHH-hhcccCc
Confidence            357999999999999 9999999999 999999999 9999  9999999999999 8876654

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.6e-12  Score=83.56  Aligned_cols=45  Identities=20%  Similarity=0.378  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGER---------PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCC---------SEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCC---------CcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=82.90  Aligned_cols=45  Identities=24%  Similarity=0.389  Sum_probs=41.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEK---------PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCC---------SEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCc---------CeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.8e-12  Score=83.48  Aligned_cols=45  Identities=22%  Similarity=0.350  Sum_probs=41.2

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|...+.|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVK---------PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCC---------SEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCc---------CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         57888999999999999999999999999999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=94.64  Aligned_cols=66  Identities=26%  Similarity=0.391  Sum_probs=56.6

Q ss_pred             CCCCCCCCCCcchh-hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhh-hhcCCCc
Q 040647            4 NNPLDLNNLPEDYS-KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHM-NRHRQER   78 (286)
Q Consensus         4 ~~pldl~nl~~e~~-~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~-r~HtgeK   78 (286)
                      .+|+.+..-.+.+. .+|++.|.++..|.+|+++|+++|         ||+|++|+|.|.+...|.+|+ ++|++|.
T Consensus        17 ~~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           17 AGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQ---------VFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSS---------SEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCC---------ccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            45666666656654 999999999999999999999876         578889999999999999996 6899875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=83.04  Aligned_cols=45  Identities=24%  Similarity=0.449  Sum_probs=41.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~h~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEK---------PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSC---------CEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCc---------CeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            5889999866         58889999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=9.2e-12  Score=82.10  Aligned_cols=45  Identities=20%  Similarity=0.358  Sum_probs=40.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~h~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEK---------PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCC---------SEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCC---------CcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4888999866         57888999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=6.6e-12  Score=90.45  Aligned_cols=54  Identities=24%  Similarity=0.444  Sum_probs=49.6

Q ss_pred             cccccC--cCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           50 KVYECR--FCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        50 KPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      |+|+|.  .|++.|.....|.+|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMR--NFSRSDHLTTHIR-THT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCC--EESCHHHHHHHHT-TCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCc--hhCCHHHHHHHHH-hcC
Confidence            457776  59999999999999999999999999999999  9999999999998 674

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.8e-12  Score=82.43  Aligned_cols=45  Identities=22%  Similarity=0.373  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEK---------PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCC---------SEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCC---------CeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4888998866         57888999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=8.3e-12  Score=82.30  Aligned_cols=45  Identities=20%  Similarity=0.241  Sum_probs=41.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREK---------SHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCC---------CEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCC---------CEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4889999866         57888999999999999999999999999999987

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.17  E-value=6.7e-12  Score=94.39  Aligned_cols=63  Identities=19%  Similarity=0.249  Sum_probs=58.6

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCC--CCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC--HPMTP  113 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~--kP~~~  113 (286)
                      ++++|+|.+|++.|.....|.+|+++|+++++|+|..|++  .|.....|.+|++ .|.++  ++|.|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~~~~~~C   68 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGL--RFKRKDRMSYHVR-SHDGSVGKPYIC   68 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCC--EESCHHHHHHHHH-HHCCCCCSSBCC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCC--ccCCHHHHHHHHH-HhcCCCCCceEC
Confidence            4578999999999999999999999999999999999999  9999999999999 88876  88875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=5.6e-12  Score=99.45  Aligned_cols=64  Identities=17%  Similarity=0.169  Sum_probs=56.1

Q ss_pred             hhcccccCCCchhhhhhh-ccCCCCccCCCCCCcccccCcCCcccCCchhhhhh-hhhcCCCcccccCCCCc
Q 040647           18 KQVLDESSSTGAGAGHRK-KKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGH-MNRHRQERETETLNKAR   87 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r-~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H-~r~HtgeKPy~C~~Cgr   87 (286)
                      ..|++.|.++..|..|++ +|+++.      .+|||+|++|++.|.....|.+| +++|++||||+|.++.+
T Consensus        22 ~~Cgk~F~~~~~L~~H~r~~H~~~~------~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           22 KYCTFQTPDLNMFTFHVDSEHPNVV------LNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SSCSCEESCHHHHHHHHHHHCSSCC------CSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCCccCCHHHHHHHHHhhCCCCC------CCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            899999999999999998 595421      24579999999999999999999 89999999999987655

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.2e-12  Score=82.38  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~h~~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEK---------PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCC---------SSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCC---------CcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4888999876         57778899999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=1.1e-11  Score=93.30  Aligned_cols=70  Identities=16%  Similarity=0.119  Sum_probs=61.6

Q ss_pred             CccCCCCCC---cccccCcCCcccCCchhhhhhhhh-cCCCcc--------cccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           41 KDGKDDECG---KVYECRFCSLKFCKSQALGGHMNR-HRQERE--------TETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        41 Kpf~C~~~e---KPy~C~~Cgk~F~~ss~L~~H~r~-HtgeKP--------y~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      +.+.|.+.+   ..|.|..|++.|.....|.+|+++ |+++++        |.|..|++  .|.....|++|++ +|+++
T Consensus        12 ~~~~c~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~   88 (95)
T 2ej4_A           12 QELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGK--SFKAKYKLVNHIR-VHTGE   88 (95)
T ss_dssp             CCCCCCCCCSSCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTC--CCSSHHHHHHHHH-HHHTC
T ss_pred             CCceeEeecCCcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCc--ccCCHHHHHHHHH-hcCCC
Confidence            345565532   347899999999999999999998 999988        99999999  9999999999999 99999


Q ss_pred             CCCCC
Q 040647          109 HPMTP  113 (286)
Q Consensus       109 kP~~~  113 (286)
                      +||.|
T Consensus        89 k~~~C   93 (95)
T 2ej4_A           89 KSGPS   93 (95)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            99986

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=81.04  Aligned_cols=45  Identities=24%  Similarity=0.400  Sum_probs=40.7

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhh-hcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMN-RHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r-~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|++ +|+++|||+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKK---------PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCC---------SBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCC---------CEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4889999876         5777889999999999999999 9999999999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=1.2e-11  Score=95.75  Aligned_cols=62  Identities=23%  Similarity=0.314  Sum_probs=57.8

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+|+| .|++.|.....|.+|+++|.++++|+|..|++  .|.....|.+|++ +|.++++|.|.
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   69 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGK--KFKMKHHLVGHMK-IHTGIKPYECN   69 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSC--EESSSHHHHHHHT-TTCCCCCEECS
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCc--ccCCHHHHHHHHH-HcCCCCCeeCC
Confidence            456889 89999999999999999999999999999999  9999999999999 89999998763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=1.7e-11  Score=90.38  Aligned_cols=65  Identities=12%  Similarity=0.138  Sum_probs=58.8

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKAR   87 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr   87 (286)
                      ..|++.|.....|..|+++|.+++     ..+++|+|.+|++.|.....|.+|+++|++++++.|..|+.
T Consensus        19 ~~C~~~f~~~~~l~~H~~~~~~~~-----~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A           19 SHCDKTFRQKQLLDMHFKRYHDPN-----FVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             SSSSCEESSHHHHHHHHHHTTCSS-----CCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhcCCc-----CCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            899999999999999999877643     12468999999999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=81.73  Aligned_cols=45  Identities=22%  Similarity=0.325  Sum_probs=40.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         2 ~h~~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEK---------PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCC---------SEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCC---------CeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4788998866         57888999999999999999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.13  E-value=1.1e-11  Score=97.69  Aligned_cols=63  Identities=24%  Similarity=0.256  Sum_probs=58.7

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .+++|.|.+|++.|.....|..|+++|+++++|.|..  |++  .|.....|.+|++ +|.++++|.+
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C   95 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK--RFSLDFNLRTHVR-IHTGDRPYVC   95 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCC--EESCHHHHHHHHH-HHHCCCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcC--ccCCHHHHHHHHH-HhCCCCceEC
Confidence            3468999999999999999999999999999999986  999  9999999999999 8999999886

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.8e-11  Score=80.84  Aligned_cols=45  Identities=22%  Similarity=0.443  Sum_probs=40.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEK---------PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCC---------SEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCC---------CEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4889999866         57888999999999999999999999999999865

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.6e-11  Score=79.87  Aligned_cols=44  Identities=23%  Similarity=0.405  Sum_probs=38.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEK---------PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCC---------SCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCc---------CeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5888998866         5777889999999999999999999999999964

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.9e-11  Score=79.64  Aligned_cols=44  Identities=23%  Similarity=0.471  Sum_probs=38.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGK---------PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSC---------SSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCC---------CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999876         5677889999999999999999999999999964

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=1.5e-11  Score=94.18  Aligned_cols=59  Identities=20%  Similarity=0.370  Sum_probs=50.2

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      |.++|++++         +|+|++|++.|.+...|.+|+++|++++||+|..|.+      ...|..|++ +|.+
T Consensus        16 ~~~~H~~~k---------py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~------~~~~~~~~~-~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNS---------TYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER------RKQLLSKQK-YADG   74 (88)
T ss_dssp             CCCSCCCCS---------CEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC------CCCCCCCCC-CCCC
T ss_pred             cccccCCCC---------CCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh------HHHHHhhhc-cccc
Confidence            345677755         6888999999999999999999999999999987776      778888888 7765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.11  E-value=2e-11  Score=83.69  Aligned_cols=52  Identities=12%  Similarity=0.203  Sum_probs=42.7

Q ss_pred             ccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccc
Q 040647           21 LDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETE   81 (286)
Q Consensus        21 ~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~   81 (286)
                      .|.|.....|..|+++|++++         +|.|.+|++.|...+.|.+|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQ---------PATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSC---------CEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCC---------CccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            467888888888988888865         5677788888888889999999999888873

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=79.22  Aligned_cols=44  Identities=27%  Similarity=0.419  Sum_probs=39.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEK---------PYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCC---------SSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCC---------CcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999866         5677889999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.1e-11  Score=79.53  Aligned_cols=44  Identities=23%  Similarity=0.434  Sum_probs=38.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEK---------PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCC---------TTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCc---------CeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5888998866         5777889999999999999999999999999964

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.4e-11  Score=79.45  Aligned_cols=44  Identities=23%  Similarity=0.460  Sum_probs=38.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|.|++|++.|.+...|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEK---------PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSS---------SBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCc---------CCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5888998866         5777889999999999999999999999999964

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.4e-11  Score=80.15  Aligned_cols=44  Identities=23%  Similarity=0.387  Sum_probs=39.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|+++|         +|+|.+|++.|.+...|.+|+++|+++|||+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQR---------PYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSS---------SEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCc---------CcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4889999866         5788899999999999999999999999999964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=79.29  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=38.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGEN---------PFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCC---------SCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCC---------CEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4888998866         5777889999999999999999999999999964

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.10  E-value=2.5e-11  Score=80.09  Aligned_cols=44  Identities=25%  Similarity=0.434  Sum_probs=39.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEK---------PFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCC---------SEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCC---------CEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4889999866         5788899999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.9e-11  Score=79.78  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=38.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|||+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGER---------HYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCC---------CEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCC---------CeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5888998865         5778889999999999999999999999999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.3e-11  Score=79.25  Aligned_cols=44  Identities=23%  Similarity=0.406  Sum_probs=38.8

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEK---------PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCC---------SEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCc---------CEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5888998866         5788889999999999999999999999999964

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.9e-11  Score=79.14  Aligned_cols=44  Identities=25%  Similarity=0.483  Sum_probs=38.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++|||+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEK---------CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCC---------CCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCC---------CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5888998866         5777889999999999999999999999999964

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.10  E-value=3.6e-11  Score=86.47  Aligned_cols=54  Identities=24%  Similarity=0.348  Sum_probs=49.6

Q ss_pred             CcccccCc--CCcccCCchhhhhhhhhcCCCcccccCC--CCcccccCCchhhhhcCCCCC
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMNRHRQERETETLN--KARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      .++|.|.+  |++.|.....|.+|+++|+++++|+|.+  |++  .|.....|.+|++ +|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k--~f~~~~~l~~H~~-~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCER--RFARSDELSRHRR-TH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCC--EESSHHHHHHHTT-TC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCc--ccCCHHHHHhHhh-cC
Confidence            45788887  9999999999999999999999999965  999  9999999999998 55

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.5e-11  Score=77.44  Aligned_cols=42  Identities=24%  Similarity=0.444  Sum_probs=35.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|++++||+|
T Consensus         1 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEK---------PYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCC---------SBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCC---------CeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788888866         46777899999999999999999999999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=79.79  Aligned_cols=44  Identities=27%  Similarity=0.539  Sum_probs=39.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|.+|++.|.+...|.+|+++|+++++|+|.+
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEK---------PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCC---------SEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCc---------CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999866         5788899999999999999999999999999964

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.7e-11  Score=79.12  Aligned_cols=44  Identities=23%  Similarity=0.385  Sum_probs=38.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEK---------PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSC---------CCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCC---------CeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5888998866         5677889999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-11  Score=79.19  Aligned_cols=44  Identities=23%  Similarity=0.379  Sum_probs=39.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEK---------PFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCC---------SEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCC---------CcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5888998866         5788889999999999999999999999999964

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=1.6e-11  Score=87.06  Aligned_cols=58  Identities=9%  Similarity=0.091  Sum_probs=50.1

Q ss_pred             hhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcC
Q 040647           30 GAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQG  101 (286)
Q Consensus        30 L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~  101 (286)
                      |..|+++|++++         ||+|+.|++.|.....|.   ++|+++++|+|..|++  .|...+++..+.
T Consensus         2 L~~h~~~H~~~k---------~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k--~f~~~~~~~~~~   59 (62)
T 1vd4_A            2 IETDERDSTNRA---------SFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHT--EVEEDESAMPKK   59 (62)
T ss_dssp             CCCCSSSCCSSS---------EEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCC--BCEECTTCSCCC
T ss_pred             hhhHHHHcCCCC---------CccCCCCCchhccHHHhH---hhcCCCCCEECCCCCC--ccccCccccccc
Confidence            677999999866         578889999999988886   8999999999999999  999888776543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.9e-11  Score=79.47  Aligned_cols=44  Identities=23%  Similarity=0.412  Sum_probs=39.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEK---------PYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCC---------CEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCC---------CeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889998866         5788889999999999999999999999999964

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=77.98  Aligned_cols=43  Identities=23%  Similarity=0.301  Sum_probs=37.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMK---------PYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSS---------SSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCc---------CeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5888998866         467778999999999999999999999999984

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=78.95  Aligned_cols=44  Identities=27%  Similarity=0.452  Sum_probs=37.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|.+
T Consensus         2 ~h~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEK---------PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCC---------SCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCc---------ccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            3788898866         5677889999999999999999999999999964

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.09  E-value=1e-11  Score=92.96  Aligned_cols=55  Identities=24%  Similarity=0.367  Sum_probs=52.0

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      ||||.|.+|++.|.....|..|+++|+++++|+|..|++  .|...+.|.+|++ +|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~h~   55 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR--KFARSDERKRHRD-IQH   55 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCC--EESSHHHHHHHHH-HHT
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCC--ccCCHHHHHHHHH-HhC
Confidence            578999999999999999999999999999999999999  9999999999998 554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.7e-11  Score=79.12  Aligned_cols=44  Identities=25%  Similarity=0.474  Sum_probs=39.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGER---------HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCC---------CEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCC---------CCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5889998866         5788899999999999999999999999999963

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=79.14  Aligned_cols=44  Identities=23%  Similarity=0.445  Sum_probs=39.2

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|++++         +|+|++|++.|.+...|.+|+++|+++|+|+|.+
T Consensus         2 ~h~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKK---------LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSC---------CCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCC---------CEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5888999866         5777889999999999999999999999999964

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.08  E-value=8.2e-12  Score=91.06  Aligned_cols=61  Identities=20%  Similarity=0.385  Sum_probs=57.8

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      ||+|.+|++.|.....|..|+++|.++++|+|..|++  .|.....|.+|++ +|.++++|.+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   61 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGK--RFHQKSDMKKHTF-IHTGEKPHKCQ   61 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCC--EESSHHHHHHHHH-HHHTCCCEECT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCCh--hhCCHHHHHHHHH-HhcCCCCCcCC
Confidence            6899999999999999999999999999999999999  9999999999999 89999988753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.08  E-value=8.4e-12  Score=92.77  Aligned_cols=63  Identities=24%  Similarity=0.424  Sum_probs=58.2

Q ss_pred             CcccccC--cCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           49 GKVYECR--FCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        49 eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+|.|.  .|++.|.....|.+|+++|+++++|.|..|++  .|.....|..|++ +|.++++|.|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   66 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMR--NFSRSDHLTTHIR-THTGEKPFACD   66 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCC--EESCHHHHHHHHH-HHHCCCCEECT
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCc--ccCCHHHHHHHHH-HcCCCCCccCC
Confidence            5788998  59999999999999999999999999999999  9999999999999 89999988753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.7e-11  Score=78.74  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=38.7

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKK---------PYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSC---------SCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCC---------CcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4888999876         5677889999999999999999999999999963

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=78.70  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=38.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|.+|++.|.....|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEK---------PYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCC---------CEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCC---------CeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5888998866         5778889999999999999999999999999864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.08  E-value=4.5e-11  Score=77.07  Aligned_cols=42  Identities=26%  Similarity=0.411  Sum_probs=36.6

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      |+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.
T Consensus         1 H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGEN---------PYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCC---------SEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCC---------CccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678888865         577888999999999999999999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.6e-11  Score=78.02  Aligned_cols=44  Identities=25%  Similarity=0.479  Sum_probs=38.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|..
T Consensus         2 ~h~~~h~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEK---------PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSS---------SCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCC---------CcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788898866         5777889999999999999999999999999963

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.7e-11  Score=78.60  Aligned_cols=44  Identities=23%  Similarity=0.403  Sum_probs=39.3

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      ++++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         3 ~~~~h~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEK---------PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCC---------SEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCC---------CeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            567888765         57888999999999999999999999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.1e-11  Score=76.68  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=36.5

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      |+++|+++|         +|+|++|++.|.+.+.|.+|+++|+++++|+|.
T Consensus         1 H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEK---------PYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCC---------SCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCC---------CeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678888866         577788999999999999999999999999883

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4e-11  Score=79.10  Aligned_cols=44  Identities=25%  Similarity=0.453  Sum_probs=39.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEK---------PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCC---------CEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCC---------CEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            5889998866         5788899999999999999999999999999963

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=79.39  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=39.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEK---------PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCC---------SEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCC---------CeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889998866         5788899999999999999999999999999963

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.8e-11  Score=77.83  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=37.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+++|++++         +|+|.+|++.|.....|..|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRK---------RYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCS---------SEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCC---------CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5888998866         577888999999999999999999999999984

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.3e-11  Score=77.95  Aligned_cols=43  Identities=21%  Similarity=0.393  Sum_probs=37.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      .|+++|+++|         +|+|++|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGEN---------PYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCC---------SCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCc---------CeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4888998866         577888999999999999999999999999884

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.4e-11  Score=79.16  Aligned_cols=44  Identities=23%  Similarity=0.427  Sum_probs=39.4

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      .|+++|++++         +|+|.+|++.|.+...|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEK---------PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCC---------SEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCc---------CccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889998866         5778889999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=5.7e-11  Score=77.49  Aligned_cols=43  Identities=16%  Similarity=0.327  Sum_probs=37.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGEN---------PFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCC---------SEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCC---------CeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5888998866         577888999999999999999999999999884

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.1e-11  Score=77.43  Aligned_cols=43  Identities=26%  Similarity=0.379  Sum_probs=38.2

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEK---------PYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCC---------SEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCC---------CeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5888998866         577888999999999999999999999999984

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=8e-11  Score=80.75  Aligned_cols=43  Identities=28%  Similarity=0.468  Sum_probs=39.8

Q ss_pred             CcccccCcCCcccCCchhhhhhhh-hcCCCcccccCCCCcccccCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMN-RHRQERETETLNKARQLVFQH   93 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r-~HtgeKPy~C~~Cgr~~sFs~   93 (286)
                      +|+|+|++|++.|.+...|.+|++ +|+++++|+|.+|++  .|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k--~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS--GPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCC--SSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCC--CCCC
Confidence            457889999999999999999997 999999999999999  8875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6.9e-11  Score=76.32  Aligned_cols=41  Identities=24%  Similarity=0.499  Sum_probs=33.8

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      |+++|++++         +|+|++|++.|.+.+.|.+|+++|+++++|+|
T Consensus         2 H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEK---------PYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSC---------CBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCC---------CEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            677888765         56777888888888889999999998888887

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=3.8e-11  Score=86.03  Aligned_cols=54  Identities=19%  Similarity=0.342  Sum_probs=50.3

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERET   80 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy   80 (286)
                      ..|++.|.+...|..|+++|++++         +|+|.+|++.|.....|.+|+++|++++|.
T Consensus        13 ~~C~k~f~~~~~L~~H~~~H~~~~---------~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           13 SECSYSCSSKAALRIHERIHCTDR---------PFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SSSSCEESSHHHHHHHHGGGCCSC---------SEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCcccCCHHHHHHHHHHcCCCC---------CEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            889999999999999999999866         578889999999999999999999999875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.8e-11  Score=77.67  Aligned_cols=44  Identities=18%  Similarity=0.314  Sum_probs=38.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCC-CcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQ-ERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htg-eKPy~C~~   84 (286)
                      .|+++|+++|         +|+|.+|++.|.+...|.+|+++|++ +++|+|.+
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEK---------CFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSC---------CEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCC---------CEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4888998865         57788899999999999999999999 99999863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.7e-11  Score=77.73  Aligned_cols=44  Identities=23%  Similarity=0.427  Sum_probs=38.3

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.....|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEK---------PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCC---------SSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCC---------CeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5888998865         5788889999999999999999999999999863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=90.97  Aligned_cols=77  Identities=19%  Similarity=0.224  Sum_probs=68.6

Q ss_pred             CCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhh--cCCCcccc-cCCCCccccc--CCchhhhhc
Q 040647           26 STGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNR--HRQERETE-TLNKARQLVF--QHNDNLAVQ  100 (286)
Q Consensus        26 ~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~--HtgeKPy~-C~~Cgr~~sF--s~~s~L~~H  100 (286)
                      +...|..|+++|++++         +|+|++|++.|.....|..|+++  |.+++++. |..|++  .|  .....|.+|
T Consensus         3 s~~~l~~H~~~H~~~~---------~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~--~f~f~~~~~l~~H   71 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGAS---------KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPK--RWSKPRKRSLLEM   71 (115)
T ss_dssp             CCCCCCCCCCCCCCCC---------SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCS--CCSSCCCCCCCCC
T ss_pred             cchhhhhheeeeCCCC---------CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCc--ccccccHHHHHHH
Confidence            4578999999999866         57888999999999999999999  88888765 999999  77  899999999


Q ss_pred             CCCCCCCCCCCCCC
Q 040647          101 GPPPHLGCHPMTPG  114 (286)
Q Consensus       101 ~r~~H~g~kP~~~~  114 (286)
                      ++ +|.++++|.|.
T Consensus        72 ~~-~H~~~~~~~C~   84 (115)
T 2dmi_A           72 EG-KEDAQKVLKCM   84 (115)
T ss_dssp             CC-SCCCCSSCBCS
T ss_pred             hh-ccCCCcceECC
Confidence            99 89999999863

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5e-11  Score=78.60  Aligned_cols=44  Identities=23%  Similarity=0.525  Sum_probs=39.1

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~h~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGER---------PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCC---------SCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCC---------CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999876         5777889999999999999999999999999963

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.4e-11  Score=77.59  Aligned_cols=43  Identities=19%  Similarity=0.338  Sum_probs=38.0

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+++|++++         +|+|++|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~~---------~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSK---------SYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCC---------CEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCC---------CeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888998865         578889999999999999999999999999884

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.8e-11  Score=78.32  Aligned_cols=44  Identities=25%  Similarity=0.413  Sum_probs=39.1

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      .+++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|.+|
T Consensus         3 ~~~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEK---------PYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCC---------TTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCC---------CeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467888766         57778899999999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.03  E-value=8.5e-11  Score=80.40  Aligned_cols=52  Identities=15%  Similarity=0.376  Sum_probs=48.3

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      ..|++.|.+...|..|+++|++++         +|+|++|++.|.....|.+|+++|+++|
T Consensus         5 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            5 EECGIRXKKPSMLKKHIRTHTDVR---------PYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             TTTCCBCSSHHHHHHHHHHTSSCC---------CEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCCcCcCCCHHHHHHHHHhcCCCC---------CccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            689999999999999999999865         5788899999999999999999999886

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.5e-11  Score=78.70  Aligned_cols=43  Identities=21%  Similarity=0.444  Sum_probs=38.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+++|+++|         +|+|++|++.|.....|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEK---------PFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCC---------SEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCC---------CeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889998866         578889999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.9e-11  Score=76.92  Aligned_cols=41  Identities=22%  Similarity=0.452  Sum_probs=36.3

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      |+++|+++|         +|+|++|++.|.+...|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEK---------PYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSC---------SEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCC---------CEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            788898866         57778899999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.03  E-value=7.9e-11  Score=75.77  Aligned_cols=41  Identities=20%  Similarity=0.339  Sum_probs=36.3

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      |+++|++++         +|+|++|++.|.+.+.|.+|+++|++++||+|
T Consensus         2 H~~~H~~~~---------~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGET---------PYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSC---------CEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCC---------CeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            678888865         57888899999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1e-10  Score=78.08  Aligned_cols=39  Identities=21%  Similarity=0.276  Sum_probs=36.9

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKAR   87 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr   87 (286)
                      +|+|+|++|++.|.+...|.+|+++|+++|+|+|.+|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567999999999999999999999999999999999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.01  E-value=3.4e-11  Score=93.07  Aligned_cols=67  Identities=15%  Similarity=0.185  Sum_probs=59.6

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPM  111 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~  111 (286)
                      .++++|++++         +|+|.+|++.|.....|..|+++|  +++|+|.+|++  .|.....|.+|++  |.++++|
T Consensus         6 s~~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~--~f~~~~~l~~H~~--H~~~~~~   70 (107)
T 1wjp_A            6 SGASPVENKE---------VYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSL--RFFSPELKQEHES--KCEYKKL   70 (107)
T ss_dssp             CCCCCCCCCC---------CCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCC--CBSSHHHHHHHHH--HCSTGGG
T ss_pred             ccCcccCCCc---------CeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCC--ccCCHHHHHHHHH--cCCCCCc
Confidence            4677888765         577788999999999999999999  58999999999  9999999999984  9999998


Q ss_pred             CC
Q 040647          112 TP  113 (286)
Q Consensus       112 ~~  113 (286)
                      .|
T Consensus        71 ~C   72 (107)
T 1wjp_A           71 TC   72 (107)
T ss_dssp             EE
T ss_pred             cC
Confidence            86

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=76.15  Aligned_cols=42  Identities=26%  Similarity=0.337  Sum_probs=35.5

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      .|+++|++++         +|+|++|++.|.+.+.|.+|+++|+++|||.|
T Consensus         2 ~H~~~H~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEK---------PYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCC---------SEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCc---------CeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4788888865         57778889999999999999999999999876

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.3e-10  Score=75.80  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=37.7

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      .|+++|++++         +|+|++|++.|.....|.+|+++|+++++|+|.
T Consensus         2 ~h~~~h~~~~---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKT---------TSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSC---------CCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCc---------CeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3788898866         577788999999999999999999999999984

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=1.5e-10  Score=75.90  Aligned_cols=38  Identities=21%  Similarity=0.462  Sum_probs=35.0

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKA   86 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cg   86 (286)
                      +|+|+|++|++.|.+...|.+|+++|+++++|.|..|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            34688899999999999999999999999999999996

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=9.3e-11  Score=90.03  Aligned_cols=57  Identities=11%  Similarity=0.135  Sum_probs=51.8

Q ss_pred             hhcccccC-CCchhhhhhhccCC-CCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           18 KQVLDESS-STGAGAGHRKKKSG-AKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        18 ~~C~k~F~-~~s~L~~H~r~HtG-eKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      ..|++.|. ++..|..|+++|++ ++         +|+|.+|++.|.+...|.+|+++|+++||....
T Consensus        28 ~~C~k~f~~~~~~L~~H~~~h~~~~~---------~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           28 PTCNVVTRKTLVGLKKHMEVCQKLQD---------ALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             TTTCCCCSSCSHHHHHHHHHHHHHHH---------HHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCCCCChhhhHHHHHHHHHHHcCCCC---------CEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            89999999 99999999999987 55         678889999999999999999999999986543

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.2e-10  Score=75.56  Aligned_cols=43  Identities=16%  Similarity=0.250  Sum_probs=37.6

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      ++++|++++         +|+|++|++.|.+...|.+|+++|+++|||+|.+
T Consensus         3 ~~~~h~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGER---------GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCS---------SCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCC---------CcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            467888765         5777889999999999999999999999999964

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=75.89  Aligned_cols=44  Identities=20%  Similarity=0.431  Sum_probs=38.9

Q ss_pred             hhhccCCCCccCCCCCCcccccC--cCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECR--FCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      |.++|+++|         +|+|.  .|++.|.....|.+|+++|+++|+|+|..|
T Consensus         3 ~~~~H~~~k---------~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEK---------PFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCC---------CEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCC---------CeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677888866         56776  799999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=75.48  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=36.8

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      +.++|+++|         +|+|++|++.|.+...|.+|+++|+++|+|+|.+
T Consensus         3 ~~~~h~~~k---------~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQK---------PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCC---------SEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCc---------CccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            466787755         6788899999999999999999999999999863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.95  E-value=8.4e-11  Score=80.52  Aligned_cols=52  Identities=12%  Similarity=-0.007  Sum_probs=49.1

Q ss_pred             CcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           58 SLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        58 gk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      +|.|.....|..|+++|+++++|.|..|++  .|.+.+.|.+|++ +|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYA--VIRQSRNLRRHLE-LRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCC--EESSHHHHHHHHH-HHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCc--ccCCHHHHHHHHH-HhccCCCCC
Confidence            578999999999999999999999999999  9999999999999 999999873

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=2.8e-10  Score=87.94  Aligned_cols=54  Identities=11%  Similarity=0.197  Sum_probs=47.9

Q ss_pred             hhccccc-CCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhh-hhhcCCCcccc
Q 040647           18 KQVLDES-SSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGH-MNRHRQERETE   81 (286)
Q Consensus        18 ~~C~k~F-~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H-~r~HtgeKPy~   81 (286)
                      .+|++.| .++..|+.|+++| +++         +|+|.+|+|.|.....|.+| +++|+++..+.
T Consensus        38 ~~C~k~F~~~~~~L~~H~~~h-~~k---------~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           38 PTCQAVGRKTIEGLKKHMENC-KQE---------MFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             TTTCSCEESSHHHHHHHHHHH-CCC---------CCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCCCCCcccCHHHHHHHHHHH-CCC---------CeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            7899999 9999999999999 866         57788999999999999999 99998765443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=1.8e-10  Score=83.03  Aligned_cols=53  Identities=21%  Similarity=0.322  Sum_probs=48.6

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      ..|++.|.+...|..|+++|++++         +|+|.+|++.|.....|.+|+++|+++..
T Consensus        18 ~~C~k~f~~~~~L~~H~~~h~~~~---------~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           18 VECGKAFSRSSILVQHQRVHTGEK---------PYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             SSSCCEESSHHHHHHHHHGGGCSC---------CEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCC---------CeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            899999999999999999999865         57888999999999999999999998753

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.90  E-value=6.2e-10  Score=72.47  Aligned_cols=41  Identities=17%  Similarity=0.395  Sum_probs=35.6

Q ss_pred             hccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCC
Q 040647           35 KKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN   84 (286)
Q Consensus        35 r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~   84 (286)
                      ++|++++         +|+|+.|++.|.+...|.+|+++|+++|+|+|.+
T Consensus         3 ~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNG---------AFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSC---------CBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCC---------CEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4677655         5778889999999999999999999999999964

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.90  E-value=2.6e-10  Score=86.21  Aligned_cols=64  Identities=23%  Similarity=0.435  Sum_probs=58.8

Q ss_pred             CCcccccCc--CCcccCCchhhhhhhhhcCCCcccccC--CCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           48 CGKVYECRF--CSLKFCKSQALGGHMNRHRQERETETL--NKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        48 ~eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      .+++|.|.+  |++.|.....|.+|+++|+++++|+|.  .|++  .|.....|.+|++ +|.++++|.|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   79 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW--RFARSDELTRHYR-KHTGAKPFQCG   79 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCC--EESSHHHHHHHHH-HHTSCCSCBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCC--ccCCHHHHHHHHH-HhCCCCCeECC
Confidence            456889986  999999999999999999999999996  6999  9999999999999 89999999863

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.90  E-value=1.9e-10  Score=85.21  Aligned_cols=63  Identities=22%  Similarity=0.379  Sum_probs=58.1

Q ss_pred             CcccccCc--CCcccCCchhhhhhhhhcCCCcccccC--CCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMNRHRQERETETL--NKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      .++|.|.+  |++.|.....|.+|+++|+++++|+|.  .|++  .|.....|.+|++ +|.++++|.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~--~f~~~~~l~~H~~-~h~~~~~~~C~   69 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGW--KFARSDELTRHYR-KHTGHRPFQCQ   69 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCC--EESSHHHHHHHHH-HHHCCCCEECS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCC--ccCCHHHHHHHHH-HcCCCCCccCC
Confidence            35789999  999999999999999999999999997  6999  9999999999998 89999998753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.8e-10  Score=71.15  Aligned_cols=39  Identities=28%  Similarity=0.473  Sum_probs=33.3

Q ss_pred             hccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           35 KKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        35 r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      ++|++++         +|+|++|++.|.+...|.+|+++|++++||+|
T Consensus         3 ~~h~~~k---------~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQR---------VYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCC---------CEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCC---------CeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4576654         67888899999999999999999999999987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=7.8e-10  Score=76.42  Aligned_cols=52  Identities=17%  Similarity=0.282  Sum_probs=46.9

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhh-hhcCCCc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHM-NRHRQER   78 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~-r~HtgeK   78 (286)
                      ..|++.|.+...|..|+++|++++         +|+|.+|++.|.+...|.+|+ ++|+++.
T Consensus         6 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            6 EVCTRAFARQEHLKRHYRSHTNEK---------PYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             TTTCCCBSCHHHHHHHHHTTTSSC---------SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CCCccccCCHHHHHHHHHHhCCCC---------CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            789999999999999999999865         578889999999999999996 7998764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.85  E-value=5.4e-10  Score=76.31  Aligned_cols=50  Identities=24%  Similarity=0.356  Sum_probs=45.4

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      ..|++.|.+...|..|+++|++++         +|+|++|++.|.....|.+|+++|.+
T Consensus         8 ~~C~~~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            8 SYCGKFFRSNYYLNIHLRTHTGEK---------PYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             TTTCCBCSCHHHHHHHHHHHHCCC---------CEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhCChHHHHHHHHHcCCCC---------CcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            789999999999999999999866         57888999999999999999998864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.83  E-value=2.8e-10  Score=83.20  Aligned_cols=54  Identities=26%  Similarity=0.348  Sum_probs=51.3

Q ss_pred             cccc--CcCCcccCCchhhhhhhhhcCCCcccccCC--CCcccccCCchhhhhcCCCCCCC
Q 040647           51 VYEC--RFCSLKFCKSQALGGHMNRHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        51 Py~C--~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||+|  +.|++.|.....|..|+++|+++++|+|..  |++  .|.....|.+|++ +|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~--~f~~~~~l~~H~~-~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK--RFSLPSRLKRHEK-VHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCC--EESSHHHHHHHHH-HHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcC--ccCCHHHHHHHHH-HhCC
Confidence            6899  889999999999999999999999999988  999  9999999999998 7876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.4e-10  Score=81.33  Aligned_cols=52  Identities=12%  Similarity=0.094  Sum_probs=48.1

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      ..|++.|.+...|..                +++|+|++|++.|.....|.+|+++|+++++|+|.+|
T Consensus        22 ~~C~k~f~~~~~l~~----------------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           22 SKCGIIFIRRSTLSR----------------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCEEECCCCCCC----------------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CcccchhCCHHHhCc----------------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            899999999998876                4578899999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=70.26  Aligned_cols=42  Identities=19%  Similarity=0.247  Sum_probs=39.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|...+.|.+|++ +|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGK--AFSQKGSLIVHIR-VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTC--CBSSHHHHHTTGG-GTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            4899999999999999999  9999999999999 9999999864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8e-10  Score=70.94  Aligned_cols=42  Identities=14%  Similarity=0.104  Sum_probs=39.6

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      |+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKE--TFSDNNRLVQHQK-MHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCC--BCSSHHHHHHHHH-HTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCC--ccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            788999999999999999  9999999999999 89999999864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.81  E-value=8.3e-10  Score=79.25  Aligned_cols=48  Identities=25%  Similarity=0.469  Sum_probs=44.5

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcC
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      .|++.|.+...|..|+++|++++         +|+|++|++.|.....|.+|+++|+
T Consensus        26 ~C~k~f~~~~~l~~H~~~h~~~~---------~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           26 SCDRRFSRSDELTRHIRIHTGQK---------PFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TBCCEESSHHHHHHHHHHHHCCC---------CEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCHHHHHHHHHhhCCCC---------CeECCCCCchhCCHHHHHHHHHhcC
Confidence            79999999999999999999866         5788899999999999999999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.3e-09  Score=69.00  Aligned_cols=42  Identities=19%  Similarity=0.166  Sum_probs=39.3

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|++|++ +|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            1 GSSGSSGGEKPYPCEICGT--RFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSSSCCBCCSSSCC--CBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             CCCcccCCCCCEECCCCCC--ccCCHHHHHHHHH-hcCCCCCCCC
Confidence            3889999999999999999  9999999999999 9999999864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.8e-10  Score=71.94  Aligned_cols=43  Identities=19%  Similarity=0.193  Sum_probs=40.4

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      .|+++|+++++|+|.+|++  .|.+.+.|.+|++ +|++++||.++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGK--AFIWKSLLIVHER-THAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCC--EESSHHHHHHHHG-GGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCc--ccCchHHHHHHHh-HhcCCCCCCCC
Confidence            5899999999999999999  9999999999999 99999999753

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=5.3e-10  Score=82.70  Aligned_cols=68  Identities=16%  Similarity=0.176  Sum_probs=58.3

Q ss_pred             CchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           27 TGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        27 ~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      +..|..|+++|.++|         ++.|.+|++.|. ...|..|+ .|.+++++.|..|++  .|. ...|..|++ +|.
T Consensus         2 ~~~L~~H~~~~c~~r---------~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~--~~~-~~~l~~H~~-~c~   66 (75)
T 2d9k_A            2 SSGSSGHEETECPLR---------LAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGR--NVL-VKDLKTHPE-VCG   66 (75)
T ss_dssp             CCCCSCCCCCCCCCC---------CEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCC--EEE-TTGGGTHHH-HBT
T ss_pred             chHHHhhCcccCCCc---------ccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCC--cCc-HHHHHHHHH-Hcc
Confidence            467888999998866         577788999995 88999999 899999999999999  887 589999998 787


Q ss_pred             CCC
Q 040647          107 GCH  109 (286)
Q Consensus       107 g~k  109 (286)
                      +++
T Consensus        67 ~~~   69 (75)
T 2d9k_A           67 REG   69 (75)
T ss_dssp             TBS
T ss_pred             CCc
Confidence            654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=71.19  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++|+|+|..|++  .|.+.+.|++|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGK--AFARKSTLIMHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCC--EESSHHHHHHHHT-TTSCCCCCSS
T ss_pred             CcccCcCCCCCeECCcCCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=70.77  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGK--VFTQNSHLVRHRG-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCC--BCSSHHHHHHHHT-TTTTSSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCc--ccCCHHHHHHHHH-hhCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999986

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3e-09  Score=70.01  Aligned_cols=42  Identities=17%  Similarity=0.216  Sum_probs=39.8

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|.+|++  .|.+...|++|++ +|++++||.|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGK--AFRVSSHLVQHHS-VHSGERPSGP   43 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCC--BCSSHHHHHHHTT-TTTSCCSCTT
T ss_pred             CCCCCCCCCcccCCCCCCc--ccCcHHHHHHHHH-hcCCCCCCCC
Confidence            4889999999999999999  9999999999999 9999999986

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=69.92  Aligned_cols=42  Identities=10%  Similarity=0.073  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGK--AFRSKSYLIIHTR-THTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCC--CCSSHHHHHHHHT-TTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCC--ccCCHHHHHHHhh-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.2e-09  Score=79.50  Aligned_cols=61  Identities=15%  Similarity=0.232  Sum_probs=52.1

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhh-hhcCCCcccccCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHM-NRHRQERETETLN   84 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~-r~HtgeKPy~C~~   84 (286)
                      ..|++.|.+...|..|+++|+++.      .+|+|+|.+|++.|.....|.+|+ +.|.++++.....
T Consensus        11 ~~C~k~f~~~~~L~~H~~~h~~~~------~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A           11 EICGFTCRQKASLNWHQRKHAETV------AALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHHHT------TTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCCCCeeCCHHHHHHHHHHhhccC------CCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            889999999999999999998631      245788999999999999999999 7898988865443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1e-09  Score=71.37  Aligned_cols=42  Identities=14%  Similarity=0.083  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDR--VFTQRNYLVQHER-THARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSC--EESSSHHHHHHHH-HCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCc--hhCCHHHHHHHhH-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999976

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=70.87  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=40.2

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGK--AFTDRSNLFTHQK-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCC--EESSHHHHHHHHT-TTTTSCCCCT
T ss_pred             CCCCCCCCCCCeECCCCCc--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999986

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.77  E-value=1.5e-09  Score=69.76  Aligned_cols=41  Identities=17%  Similarity=0.179  Sum_probs=39.1

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGK--AFNRKDQLISHQR-THAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCC--EESSHHHHHHHHG-GGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcCh--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            789999999999999999  9999999999999 9999999986

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=70.87  Aligned_cols=42  Identities=17%  Similarity=0.221  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGK--AFSQTSKLARHQR-VHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCC--CCSSHHHHHHHGG-GGCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999986

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.2e-09  Score=70.46  Aligned_cols=42  Identities=24%  Similarity=0.294  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGK--VFTQNSHLARHRG-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCC--CCSSHHHHHHHHT-TTSCSCCSST
T ss_pred             CCCcCCCCCcCeECCCCCc--ccCChhHHHHHhH-hcCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=70.39  Aligned_cols=43  Identities=16%  Similarity=0.173  Sum_probs=40.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGK--EFSQSSHLQTHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCC--BCSSHHHHHHHHT-TTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCc--ccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            6899999999999999999  9999999999999 99999999863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.8e-09  Score=70.98  Aligned_cols=43  Identities=19%  Similarity=0.246  Sum_probs=40.6

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGK--RFTQNSHLHSHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCC--CBSSHHHHHHHGG-GGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCc--ccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            6899999999999999999  9999999999999 99999999863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=8e-10  Score=71.89  Aligned_cols=43  Identities=9%  Similarity=0.026  Sum_probs=40.7

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGK--AFTRIFHLTRHQK-IHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTE--EESSSHHHHTTHH-HHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCc--ccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            6899999999999999999  9999999999999 99999999864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.3e-09  Score=70.35  Aligned_cols=42  Identities=19%  Similarity=0.264  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGK--AFRAHSNLTTHQV-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTC--CCSSHHHHHHHHT-TTCCSCCSSC
T ss_pred             CcccccCCCCCeECCcCCh--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.6e-09  Score=69.94  Aligned_cols=43  Identities=23%  Similarity=0.308  Sum_probs=40.4

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGK--SFSFNSQLIVHQR-IHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCC--BCSSHHHHHHHHT-TTTTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCCCc--hhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            6899999999999999999  9999999999999 89999999863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.7e-09  Score=70.02  Aligned_cols=42  Identities=24%  Similarity=0.302  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGK--VFTHKTNLIIHQK-IHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCC--BCSSHHHHHHHHT-TTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECCccCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.2e-09  Score=69.65  Aligned_cols=42  Identities=19%  Similarity=0.202  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGK--VFSRKDQLVSHQK-THSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTE--ECSSHHHHHHHHT-TSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCC--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999875

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.1e-09  Score=70.38  Aligned_cols=42  Identities=17%  Similarity=0.173  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGK--SFIQKSHLNRHRR-IHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCC--EESSHHHHHHHGG-GTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECCCCCh--hhCChHHHHHHHH-hcCCCCCcCC
Confidence            6899999999999999999  9999999999999 9999999986

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.5e-09  Score=70.14  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGK--VFTQNSHLARHRG-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCC--BCSSHHHHHHHGG-GTSCCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCC--eeCCHHHHHHHhh-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999986

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.4e-09  Score=70.09  Aligned_cols=42  Identities=19%  Similarity=0.234  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|.+++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGK--AFAQKANLTQHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCC--EESSHHHHHHHHT-TTSSCCSSCS
T ss_pred             CCccCCCCCCCeECCCCCC--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=2.3e-09  Score=70.37  Aligned_cols=42  Identities=17%  Similarity=0.220  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDM--CFSQASSLRLHQN-VHVGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCC--CCSSHHHHHHHGG-GGSSSSCSCS
T ss_pred             CCcCccCCCcCeECCCCCc--ccCCHHHHHHHHH-HcCCCCCcCC
Confidence            6899999999999999999  9999999999999 8999999985

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=69.61  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGK--AFSQTSKLARHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCC--CCSSHHHHHHHHT-TTTTCSCCCS
T ss_pred             CCCcCCCCCcCcCCCCCCC--ccCCHHHHHHHHH-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.5e-09  Score=70.26  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=40.5

Q ss_pred             hhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++|+++|+++++|+|..|++  .|.....|.+|++ +|+++++|.+
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em5_A            1 GSSGSSGSSTKSHQCHECGR--GFTLKSHLNQHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSCSEECSSSCC--EESSHHHHHHHHT-TTSCSCCSSC
T ss_pred             CCCcCCCCCCCCeECCcCCC--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            36999999999999999999  9999999999999 8999999975

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.2e-09  Score=69.80  Aligned_cols=43  Identities=12%  Similarity=0.098  Sum_probs=40.4

Q ss_pred             hhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++|+++|+++++|+|..|++  .|.+.+.|..|++ +|+++++|.|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2emb_A            1 GSSGSSGHTRKRYECSKCQA--TFNLRKHLIQHQK-THAAKSGPSS   43 (44)
T ss_dssp             CCCCSCCCCCSSEECTTTCC--EESCHHHHHHHGG-GGCCCCCTTC
T ss_pred             CCcccccCCCCCeECCCCCC--ccCCHHHHHHHHH-HcCCCCCcCC
Confidence            36899999999999999999  9999999999999 9999999875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.1e-09  Score=70.42  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=40.2

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGK--SFIKKSQLHVHQR-IHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCC--CCSSHHHHHHHHG-GGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCCCCCc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.73  E-value=2.5e-09  Score=70.01  Aligned_cols=42  Identities=19%  Similarity=0.248  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAK--TFSLKSQLIVHQR-SHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSC--EESSHHHHHHHGG-GSSSCCCSCC
T ss_pred             ccccCCCCCCceECCCCCc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999986

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.9e-09  Score=69.83  Aligned_cols=42  Identities=24%  Similarity=0.304  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGK--VFRRNSHLARHQL-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCC--EESSHHHHHHHHT-TTCCCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCc--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.9e-09  Score=69.31  Aligned_cols=42  Identities=21%  Similarity=0.251  Sum_probs=39.7

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRK--AFSHHASLTQHQR-VHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCC--BCSSSHHHHHHGG-GSCCSCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            4789999999999999999  9999999999999 9999999986

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.73  E-value=4.1e-09  Score=66.79  Aligned_cols=35  Identities=49%  Similarity=0.928  Sum_probs=31.3

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      +|+|+|++|++.|...+.|..|+++|+++|+|.++
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            45788899999999999999999999999999874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.73  E-value=2.3e-09  Score=70.30  Aligned_cols=42  Identities=21%  Similarity=0.295  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGK--VFSRNSQLSQHQK-IHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCC--EESSHHHHHHHHT-GGGCCCCCSS
T ss_pred             CCccCCCCCcCcCCCCCcc--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999985

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.7e-09  Score=69.31  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+...|++|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGK--AFSDHIGLNQHRR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCC--CBSSHHHHHHHHT-TTTTCCCCSS
T ss_pred             CCCCCcCCCCCeECCCCCc--eeCCHHHHHHHHH-HhCCCCCCCC
Confidence            4899999999999999999  9999999999999 9999999986

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.2e-09  Score=69.75  Aligned_cols=42  Identities=17%  Similarity=0.262  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|++|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGK--AFTRKSTLSMHQK-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCC--EESCHHHHHHHGG-GTSCSSCSCC
T ss_pred             ccccccCCCCCeECCCCCc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.3e-09  Score=69.54  Aligned_cols=42  Identities=24%  Similarity=0.318  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGK--VFRHNSYLSRHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCC--EESSHHHHHHHHT-TTCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCCc--hhCChHHHHHHHh-hcCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.7e-09  Score=70.99  Aligned_cols=42  Identities=17%  Similarity=0.146  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGK--AFTIRSNLIKHQK-IHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCC--EESSHHHHHHHHH-HTSCCCCSSC
T ss_pred             CcccCCCCCcCeECCCCCh--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6999999999999999999  9999999999999 8999999985

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.2e-09  Score=70.39  Aligned_cols=43  Identities=21%  Similarity=0.249  Sum_probs=40.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGK--SFTKKSQLHVHQQ-IHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCC--EESSHHHHHHHHH-TTSSCCSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCc--ccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            6899999999999999999  9999999999999 99999999863

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3e-09  Score=69.61  Aligned_cols=42  Identities=14%  Similarity=0.116  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGK--NFCYISALRIHQR-VHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCC--EESSHHHHHHHHT-TTCCSCSSCC
T ss_pred             CccccCCCCCCeECCCcCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999986

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=69.72  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=40.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|...+.|.+|++ +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGK--AFSVRSSLTTHQA-IHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTE--ECSSHHHHHHHHT-TSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCCh--hhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            6899999999999999999  9999999999999 99999999863

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.3e-09  Score=69.54  Aligned_cols=42  Identities=14%  Similarity=0.183  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGK--SYNQRVHLTQHQR-VHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCC--EESSSHHHHTTGG-GGSSCCSSCS
T ss_pred             CCCCCCCCCCCeECCCCCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999985

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.4e-09  Score=70.27  Aligned_cols=42  Identities=24%  Similarity=0.315  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|...+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGK--AFSHRQSLSVHQR-IHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCC--EESSHHHHHHHHG-GGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCCCcCC--ccCCHHHHHHHHH-HhcCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999985

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.3e-09  Score=70.17  Aligned_cols=43  Identities=23%  Similarity=0.316  Sum_probs=40.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQK--AFNTKSNLIVHQR-THTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCC--EESSHHHHHHHHH-TSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCc--ccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            6899999999999999999  9999999999999 99999999863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.6e-09  Score=70.08  Aligned_cols=42  Identities=21%  Similarity=0.289  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGK--AFIQKSTLSMHQR-IHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCC--EESSHHHHHHHHG-GGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCCCCCc--ccCCHHHHHHHHh-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.71  E-value=4.7e-09  Score=64.55  Aligned_cols=33  Identities=24%  Similarity=0.470  Sum_probs=30.6

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCccccc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERETET   82 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C   82 (286)
                      |||+|++|++.|...+.|..|+++|+++++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999853

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.6e-09  Score=68.96  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=39.8

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGK--AFSSKSYLIIHMR-THSGEKPSGP   43 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCC--BCSCHHHHHHHHT-TTCCSCSSCC
T ss_pred             CCCcCcCCCCCcCCCccCh--hhCChHHHHHHHH-HhCCCCCCCC
Confidence            4899999999999999999  9999999999999 8999999986

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=8.2e-09  Score=76.51  Aligned_cols=39  Identities=21%  Similarity=0.251  Sum_probs=33.7

Q ss_pred             CCcccccCc--CCcccCCchhhhhhh-hhcCCCcccccCCCC
Q 040647           48 CGKVYECRF--CSLKFCKSQALGGHM-NRHRQERETETLNKA   86 (286)
Q Consensus        48 ~eKPy~C~~--Cgk~F~~ss~L~~H~-r~HtgeKPy~C~~Cg   86 (286)
                      ++|||+|.+  |+|+|.+.++|++|+ ++|+++|||-|..-.
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~   65 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVE   65 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccccc
Confidence            567788865  999999999999997 699999999997644

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.3e-09  Score=70.47  Aligned_cols=42  Identities=14%  Similarity=0.132  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRK--TFIQIGHLNQHKR-VHTGERSSGP   43 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCC--CCSSHHHHHHHHH-HCSSCCSCST
T ss_pred             CCCCCcCCCCCcCCCCcCc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.9e-09  Score=69.84  Aligned_cols=42  Identities=19%  Similarity=0.193  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQK--AFNTKSNLMVHQR-THTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCC--EESCHHHHHHHHH-HTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCc--ccCCHhHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4e-09  Score=69.26  Aligned_cols=42  Identities=10%  Similarity=0.051  Sum_probs=39.8

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCC-CCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG-CHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g-~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|++|++ +|++ +++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEK--TFSCSKYLTQHER-IHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCC--EESSSHHHHHHHT-TCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcCCCC--cCCCHHHHHHHHH-HcCCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999 999875

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.5e-09  Score=71.23  Aligned_cols=42  Identities=21%  Similarity=0.277  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSK--AFTQKAHLAQHQK-THTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCC--EESSHHHHHHHHH-HHCCCCCCCS
T ss_pred             CCCCCCCCCcCeECCCCCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.7e-09  Score=69.46  Aligned_cols=41  Identities=15%  Similarity=0.098  Sum_probs=38.9

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |+++|+++|+|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGA--RFVQVAHLRAHVL-IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCC--EESSHHHHHHHTH-HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcCh--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            789999999999999999  9999999999999 9999999864

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.6e-09  Score=69.90  Aligned_cols=43  Identities=19%  Similarity=0.188  Sum_probs=40.4

Q ss_pred             hhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++|+++|+++++|+|..|++  .|.....|.+|++ +|+++++|.+
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCGK--AFGLSAELVRHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSCC--EESSHHHHHHHHG-GGCCCSCCSS
T ss_pred             CCCCCCCCCCCCeECCCCCh--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            36999999999999999999  9999999999999 9999999975

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.70  E-value=3.5e-09  Score=69.33  Aligned_cols=42  Identities=17%  Similarity=0.183  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGK--SFRWASCLLKHQR-VHSGEKPSGP   43 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCC--EESSHHHHHHHGG-GGTSCCCCST
T ss_pred             CCCCCCCCCcCeECCcccc--ccCChHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999975

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3e-09  Score=69.78  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGK--RFTQNSQLHSHQR-VHTGEKPSGP   43 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTE--EESSHHHHHHHGG-GGSCCCCSCC
T ss_pred             CcccCCCCCCCeeCCCCCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4e-09  Score=69.25  Aligned_cols=42  Identities=14%  Similarity=0.184  Sum_probs=39.8

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGK--GYNRRLNLDMHQR-VHMGEKTSGP   43 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCC--BCSSHHHHHHHGG-GGGSCCCCCS
T ss_pred             CCCCCCCCCCCeeCcccCc--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            4899999999999999999  9999999999999 9999999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.70  E-value=2.6e-09  Score=68.47  Aligned_cols=41  Identities=15%  Similarity=0.077  Sum_probs=38.9

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |+++|+++++|+|..|++  .|.+.+.|++|++ +|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGK--SFTQRGSLAVHQR-SCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCC--EESSHHHHHHHHH-HTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCc--ccCCHHHHHHHhh-hcCCCCCCCC
Confidence            789999999999999999  9999999999999 9999999874

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.4e-09  Score=70.11  Aligned_cols=43  Identities=16%  Similarity=0.153  Sum_probs=40.4

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGK--SFSRAPCLLKHER-LHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTB--CCSCHHHHHHHHH-HCCSSSCCCCC
T ss_pred             CCcccCCCCCCeECCCCCC--ccCchHHHHHHHH-hcCCCCCCCCC
Confidence            6899999999999999999  9999999999999 89999999863

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.5e-09  Score=69.99  Aligned_cols=42  Identities=24%  Similarity=0.321  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGK--VFTQNSHLANHQR-IHTGVKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTE--ECSSHHHHHHHHG-GGSCCCSCSS
T ss_pred             CCCCCCCCCCCeECCCcCh--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999975

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.69  E-value=2.2e-09  Score=70.55  Aligned_cols=42  Identities=19%  Similarity=0.256  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGK--AFSQTTHLIQHQR-VHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCC--BCSCHHHHHHHHH-HHSSCCCSSC
T ss_pred             CCCCccCCCCceECCCCCc--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.4e-09  Score=70.19  Aligned_cols=42  Identities=14%  Similarity=0.086  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGK--SFCGRSRLNRHSM-VHTAEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCC--CCSSHHHHHHHHH-HTTCCCSSSC
T ss_pred             CCCCCCCCCCCcCCCcCCc--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999985

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=4.3e-09  Score=68.97  Aligned_cols=42  Identities=17%  Similarity=0.158  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGK--GFICRRDLYTHHM-VHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCC--EESCHHHHHHHGG-GGTTCCCSST
T ss_pred             CCCCCCCCCcCccCCCccc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.9e-09  Score=70.61  Aligned_cols=43  Identities=19%  Similarity=0.300  Sum_probs=40.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGK--AFRARSSLAIHQA-THSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCC--EESSHHHHHHHHH-HHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCC--hhcCHHHHHHHHH-HcCCCCCCCCC
Confidence            6899999999999999999  9999999999999 89999999863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.8e-09  Score=70.98  Aligned_cols=42  Identities=14%  Similarity=0.231  Sum_probs=40.1

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGK--AFTRKSGLHIHQQ-SHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCC--EESSHHHHHHHHH-HHTCCCBTTT
T ss_pred             CcccccCCCCCEECcccCC--ccCCHhHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=2.5e-09  Score=70.19  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGK--VFTQNSHLARHRR-VHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCC--EESSSHHHHHHTH-HHHSCCCSCS
T ss_pred             CcCcCCCCCCCeECCcCCc--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.68  E-value=4.7e-09  Score=73.76  Aligned_cols=50  Identities=20%  Similarity=0.344  Sum_probs=45.0

Q ss_pred             hhcccccCCCchhhhhhhc-c-CCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCC
Q 040647           18 KQVLDESSSTGAGAGHRKK-K-SGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~-H-tGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      +.|++.|.+...|..|+++ | ++++         +|+|++|++.|.+...|.+|+++|.+
T Consensus        14 ~~C~k~f~~~~~l~~H~~~~H~~~~~---------~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           14 KVCSRVYTHISNFCRHYVTSHKRNVK---------VYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTTCCEESSHHHHHHHHHHHSSSSCC---------CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcchhCCHHHHHHHHHHHcCCCCc---------CeECCCCCCccCCHHHHHHHHHHHcC
Confidence            8999999999999999998 7 5654         68889999999999999999998875

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=2.2e-09  Score=70.52  Aligned_cols=42  Identities=19%  Similarity=0.327  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|++|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGK--AFKTKSSLICHRR-SHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCC--EESSHHHHHHHHH-HHSSSSCCCC
T ss_pred             CCccccCCCcCcCCCCCCC--ccCCHHHHHHHHH-hcCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.6e-09  Score=71.19  Aligned_cols=43  Identities=12%  Similarity=-0.005  Sum_probs=40.5

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGK--AFVLSAHLNQHLR-VHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTE--EESSHHHHHHHHH-HHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccCh--hhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            6899999999999999999  9999999999999 89999999863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.68  E-value=1.8e-09  Score=70.92  Aligned_cols=42  Identities=21%  Similarity=0.259  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGK--SFSISSQLATHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSC--EESSHHHHHHHHH-HHTTSCSSSS
T ss_pred             CCCCCCCCCCCEECCCCCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=3.4e-09  Score=69.34  Aligned_cols=42  Identities=12%  Similarity=0.162  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGK--AFCWKSQLIMHQR-THVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCC--EESSSHHHHHHHH-HCCSCCCSCC
T ss_pred             cCcccCCCCCCeeCCCCCC--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999985

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.3e-09  Score=71.56  Aligned_cols=44  Identities=16%  Similarity=0.118  Sum_probs=40.8

Q ss_pred             hhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      ++|+++|+++|+|+|..|++  .|.+...|.+|++ +|+++++|.|.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2en3_A            1 GSSGSSGTGEKPFQCKECGM--NFSWSCSLFKHLR-SHERTDPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCSEECSSSCC--EESSSHHHHHHHH-HHHHSCCSSCS
T ss_pred             CccccccCCCCCeeCcccCh--hhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            36899999999999999999  9999999999999 89999999863

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5e-09  Score=68.67  Aligned_cols=42  Identities=17%  Similarity=0.199  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGK--GYNSKFNLDMHQK-VHTGERPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTE--EESCHHHHHHHHT-TSCSCCSSCC
T ss_pred             CCCcCCCCCCCeECCCCCC--ccCCHHHHHHHHH-hhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999985

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=6.6e-09  Score=64.72  Aligned_cols=37  Identities=19%  Similarity=0.496  Sum_probs=30.3

Q ss_pred             hhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           34 RKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        34 ~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      +++|++++         +|+|++|++.|.....|.+|+++|+++||
T Consensus         1 ~~~h~~~k---------~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGR---------SYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCC---------CCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCC---------CcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            35677655         57888899999999999999999998875

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=2.5e-09  Score=70.04  Aligned_cols=42  Identities=19%  Similarity=0.227  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|++|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGK--SFIQSAHLIQHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCC--EESSHHHHHHHHH-HHSCCCTTSS
T ss_pred             CCcCCcCCCCCeeCCCCCh--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999975

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=2.9e-09  Score=69.97  Aligned_cols=42  Identities=17%  Similarity=0.226  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKK--TFTQSSSLTVHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCC--BCSSHHHHHHHHH-HHTSSCCCSC
T ss_pred             CCCCCCCCCCCEECCccCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            5899999999999999999  9999999999999 9999999986

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.66  E-value=4.3e-09  Score=69.09  Aligned_cols=42  Identities=14%  Similarity=0.071  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++|+|+|..|++  .|.+...|.+|++ +|+++++|.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEK--SFSGKLRLLVHQR-MHTREKPSGP   43 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSC--EESSHHHHHHHHG-GGCCSSCCSC
T ss_pred             CCCCCCCCCCCeECCCCCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.66  E-value=3.7e-09  Score=69.46  Aligned_cols=42  Identities=19%  Similarity=0.262  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGK--GFSRRSALNVHHK-LHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCC--CBSSTTHHHHHHH-HHSCCSSCSC
T ss_pred             CCCCCCCCCCCcccCccCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            4899999999999999999  9999999999999 8999999986

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.8e-09  Score=70.99  Aligned_cols=43  Identities=16%  Similarity=0.144  Sum_probs=40.3

Q ss_pred             hhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGK--NFGRHSHLIEHLK-RHFREKSSGP   43 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCC--EESSHHHHHHHHH-HHHSTTSSCC
T ss_pred             CCCCCCCCCCCCEEccccCc--ccCCHHHHHHHHH-HHcCCCCCCC
Confidence            36999999999999999999  9999999999999 8999999975

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=2.6e-09  Score=70.03  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGK--AFSRKYQLISHQR-THAGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCC--EESSHHHHHHHHH-HHTTSCCSCS
T ss_pred             CCCCCCCCCcCcCCCCCCc--ccCcHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999975

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=3.2e-09  Score=69.48  Aligned_cols=42  Identities=14%  Similarity=0.181  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|.++++|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGK--SFTWKSRLRIHQK-CHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCC--BCSSHHHHHHHHH-HHSCCSSCCS
T ss_pred             CCCCCCCCCCCccCCccCh--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999975

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=3e-09  Score=69.77  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGK--VFTQNSHLTNHWR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCC--EESSHHHHHHHHH-HHSSSSCSSC
T ss_pred             CCcccCCCCCCEeCCcCCC--ccCCHHHHHHHHH-HHCCCCCCCC
Confidence            6899999999999999999  9999999999999 9999999985

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.64  E-value=1.3e-08  Score=63.30  Aligned_cols=36  Identities=28%  Similarity=0.516  Sum_probs=27.4

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      |+++|+++|         +|+|+.|++.|.....|.+|+++|+++
T Consensus         2 H~~~h~~~k---------~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIK---------PFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSS---------SBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCC---------CccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677787765         466677888888888888888888764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.64  E-value=7.1e-09  Score=74.23  Aligned_cols=47  Identities=21%  Similarity=0.473  Sum_probs=42.1

Q ss_pred             hcccccCCCchhhhhhhccCCCCccCCCCCCcccccCc--CCcccCCchhhhhhhhhc
Q 040647           19 QVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRF--CSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        19 ~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~--Cgk~F~~ss~L~~H~r~H   74 (286)
                      .|++.|.+...|..|+++|+++++         |+|.+  |++.|.....|.+|+++|
T Consensus        24 ~C~k~f~~~~~L~~H~~~H~~~~~---------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           24 GCGKTYFKSSHLKAHTRTHTGEKP---------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TTCCEESSHHHHHHHHHHHSSSCS---------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCCHHHHHHHHHhcCCCCC---------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            399999999999999999998764         66654  999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=2.7e-09  Score=70.01  Aligned_cols=42  Identities=14%  Similarity=0.131  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|...+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGK--AFSVYSSLTTHQV-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCC--EESCHHHHHHHHH-HHHCCSCCSC
T ss_pred             CcccccCCCcCeECCCCCc--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=2.3e-09  Score=70.31  Aligned_cols=42  Identities=21%  Similarity=0.213  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGK--AFTDRSNLIKHQK-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCC--EESSHHHHHHHHH-HHHCSSCSSS
T ss_pred             CCCCCCCCCCCcCCCCCCc--hhCCHHHHHHHHH-hcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999975

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=3.4e-09  Score=68.85  Aligned_cols=41  Identities=17%  Similarity=0.178  Sum_probs=39.1

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         1 H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEK--AFSSKSYLLVHQQ-THAEEKPSGP   41 (44)
T ss_dssp             CCCCCSSCCCEECSSSSC--EESSHHHHHHHHH-HHTSSCSCSC
T ss_pred             CCCCcCCCcCccCCCCCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            789999999999999999  9999999999999 8999999975

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.1e-08  Score=67.13  Aligned_cols=43  Identities=19%  Similarity=0.215  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++.+|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGK--AFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCC--CBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             ccccccCCCCCEECCccCc--hhCChHHHHHHhHhhcCCCCCCCC
Confidence            5899999999999999999  999999999998857999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=2.7e-09  Score=69.89  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|++|++ +|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGK--AFIHDSQLQEHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCC--EESSHHHHHHHHH-HHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCCCCC--CcCCHHHHHHHHH-hcCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=3.5e-09  Score=69.44  Aligned_cols=42  Identities=17%  Similarity=0.260  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGK--AFHRHTHLNEHRR-IHTGYRPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCC--EESSHHHHHHHHH-HHTCCCSSCS
T ss_pred             CCccccCCCcCeECCCCCC--eeCChHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=2.3e-09  Score=70.41  Aligned_cols=42  Identities=17%  Similarity=0.061  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGK--GFGRRSHLAGHLR-LHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCC--CCSSHHHHHHHHH-HHHHTTCCCS
T ss_pred             CCCcCCCCCCCeECCCCCc--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999986

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=4.2e-09  Score=69.17  Aligned_cols=42  Identities=21%  Similarity=0.237  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGK--AFRQNIHLASHLR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCC--EESSHHHHHHHHH-HHCCCCSSCS
T ss_pred             CCCCCCCCCCCEECCcCCc--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=5.9e-09  Score=68.31  Aligned_cols=42  Identities=17%  Similarity=0.162  Sum_probs=39.8

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGK--GFYTNSQCYSHQR-SHSGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCC--EESSHHHHHHHHH-HSCCSSCCSS
T ss_pred             CCCCCCCCCCCcCCCCCCC--cCCChHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999975

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=3.1e-09  Score=69.67  Aligned_cols=42  Identities=17%  Similarity=0.230  Sum_probs=40.0

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      +|+++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.+
T Consensus         2 ~h~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGK--TFSQKSILSAHQR-THTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTE--EESSHHHHHHHHH-HHSSCCCSSS
T ss_pred             CCCCccCCCcCeECCCCCc--ccCchHHHHHHHH-HcCCCCCCCC
Confidence            6899999999999999999  9999999999999 8999999985

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=8.1e-09  Score=73.18  Aligned_cols=51  Identities=14%  Similarity=0.157  Sum_probs=46.0

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccC-cCCcccCCchhhhhhhhhcCCCcc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECR-FCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~-~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      ..|++.|. ...|..|+++ ++++         ||+|+ .|++.|..++.|.+|+++|..+++
T Consensus        14 ~~C~k~f~-~~~L~~H~~~-~~~~---------p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           14 TYCTKEFV-FDTIQSHQYQ-CPRL---------PVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             SSSCCEEE-HHHHHHHHHH-CSSS---------EEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cccCCccC-HHHHHHHHHH-cCCc---------CccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            88999999 9999999999 8765         67888 899999999999999999987765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.59  E-value=5.8e-09  Score=63.57  Aligned_cols=31  Identities=23%  Similarity=0.426  Sum_probs=28.0

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCccc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERET   80 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy   80 (286)
                      |||+|++|++.|.+.+.|.+|+++|+++|||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5789999999999999999999999999886

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=6.4e-09  Score=67.63  Aligned_cols=42  Identities=14%  Similarity=0.177  Sum_probs=39.7

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.|
T Consensus         2 ~h~~~h~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGK--IFRHSSLLIEHQA-LHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCC--CCSSHHHHHHHHH-HHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCc--ccCCHHHHHHHHH-HHCCCCCCCC
Confidence            5889999999999999999  9999999999999 9999999975

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=5.7e-09  Score=68.39  Aligned_cols=42  Identities=14%  Similarity=0.177  Sum_probs=39.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGE--IFFQYVSLIEHQV-LHMGQKNSGP   43 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCC--EESSHHHHHHHHH-HHSCCSCCCT
T ss_pred             CcccccCCCCCEEccccCh--hhCCHHHHHHHHH-HhCCCCCCCC
Confidence            5899999999999999999  9999999999999 8999999986

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=5.3e-09  Score=68.79  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=39.7

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++|+|+|..|++  .|.+.+.|++|++ +|++++||.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGK--AFGDNSSCTQHQR-LHTGQRPSGP   43 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTB--CCSSHHHHHHHHH-HHHSCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCc--hhCCHHHHHHHHH-HcCCCCCCCC
Confidence            4889999999999999999  9999999999999 8999999986

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.56  E-value=1.9e-08  Score=72.96  Aligned_cols=54  Identities=17%  Similarity=0.284  Sum_probs=46.5

Q ss_pred             hhcccccCCCchhhhhhh-ccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhh-cCCCcc
Q 040647           18 KQVLDESSSTGAGAGHRK-KKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNR-HRQERE   79 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r-~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~-HtgeKP   79 (286)
                      ..|++.|.+...|..|++ +|+++        +++|+|++|++.|.+...|.+|+++ |..++|
T Consensus        19 ~~C~k~f~~~~~L~~H~~~~h~~~--------~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           19 YICHARFTQSGTMKMHILQKHTEN--------VAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             TTTCCEESCHHHHHHHHHHHSSSS--------CSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCcCchhCCHHHHHHHHHHhcCCC--------CCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            899999999999999997 68763        2478899999999999999999997 555665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.5e-08  Score=66.18  Aligned_cols=42  Identities=14%  Similarity=0.148  Sum_probs=39.1

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPG  114 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~  114 (286)
                      +.++|+++|+|+|..|++  .|.+...|.+|++ +|+++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGK--SFRAKGNLVTHQR-IHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTE--EESSHHHHHHHHT-TTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCC--ccCChHHHHHHHH-HhCCCCCCCCC
Confidence            578899999999999999  9999999999999 99999999863

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=7e-09  Score=68.09  Aligned_cols=42  Identities=12%  Similarity=0.144  Sum_probs=39.7

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++|+++++|+|..|++  .|.+...|++|++ +|+++++|.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGK--GYKRRLDLDFHQR-VHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCC--EESSHHHHHHHHH-HHHCCCCCCS
T ss_pred             CCCCCCCCCCCeECcccCc--hhCCHHHHHHHHH-HHcCCCCCCC
Confidence            4889999999999999999  9999999999999 8999999985

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.53  E-value=3.5e-08  Score=60.31  Aligned_cols=31  Identities=26%  Similarity=0.480  Sum_probs=26.3

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      +|+|+|.+|++.|.+...|.+|+++|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            3467888899999999999999999998875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.53  E-value=2.6e-08  Score=78.98  Aligned_cols=49  Identities=16%  Similarity=0.192  Sum_probs=45.3

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ..|++.|.+...|..|+++|  ++         +|+|++|++.|.+...|.+|+++|+++
T Consensus        78 ~~C~k~f~~~~~l~~H~~~H--~~---------~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           78 PLCLMPFSSSVSLKQHIRYT--EH---------TKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTTCCEESSHHHHHHHHHHT--CC---------CCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCcccCCHhHHHHHHHHC--CC---------CCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            78999999999999999999  55         578889999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.53  E-value=4.1e-08  Score=60.24  Aligned_cols=31  Identities=19%  Similarity=0.469  Sum_probs=25.5

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      +|+|+|++|++.|...+.|.+|+++|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            3467788888889888899999988888875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=65.07  Aligned_cols=41  Identities=20%  Similarity=0.208  Sum_probs=38.7

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++++|+++++|+|..|++  .|.+...|++|++ +|+++++|.+
T Consensus         3 ~~~~h~~~~~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHK--SFRYGSSLTVHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSTTCCSEECSSSCC--EESSHHHHHHHHT-TTSSSCCCSC
T ss_pred             CCCCCCCCCCeeCcccCc--ccCChHHHHHHHH-HhCCCCCCCC
Confidence            578999999999999999  9999999999999 9999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=2.9e-08  Score=63.33  Aligned_cols=39  Identities=18%  Similarity=0.291  Sum_probs=36.6

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++|+++++|+|..|++  .|.+...|.+|++ +|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGK--SFRQKGSLTLHER-IHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCC--EESSHHHHHHHGG-GCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCC--CcCCHHHHHHHHH-HhCCCCCcCC
Confidence            5799999999999999  9999999999999 9999999874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.6e-08  Score=66.46  Aligned_cols=41  Identities=20%  Similarity=0.258  Sum_probs=38.7

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++++|+++++|+|..|++  .|.+...|++|++ +|++++||.|
T Consensus         3 ~~~~h~~~k~~~C~~C~k--~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGK--FFLQASNFIQHRR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCC--CCSSHHHHHHHHH-HHSSCCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCC--eeCChHHHHHHHH-HhCCCCCCCC
Confidence            578899999999999999  9999999999999 8999999986

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.46  E-value=3e-08  Score=61.60  Aligned_cols=37  Identities=19%  Similarity=0.259  Sum_probs=33.9

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      .|+++|+++|+|+|..|++  .|.+...|.+|++ +|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDR--SFSRSDHLALHRK-RHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCC--CBSSHHHHHHHHG-GGTCC
T ss_pred             CCCCcCCCCCCccCCCCCc--ccCcHHHHHHHHH-HhccC
Confidence            3889999999999999999  9999999999998 78753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=7.7e-08  Score=59.83  Aligned_cols=29  Identities=24%  Similarity=0.621  Sum_probs=24.5

Q ss_pred             cccccCcCCcccCCc-hhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKS-QALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~s-s~L~~H~r~HtgeK   78 (286)
                      |+|+|++|++.|.+. +.|.+|+++|+++|
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            467788899999998 89999999998875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=8.4e-08  Score=62.98  Aligned_cols=42  Identities=19%  Similarity=0.256  Sum_probs=39.1

Q ss_pred             hhhhhcCCCcccccC--CCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           69 GHMNRHRQERETETL--NKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|.++|+++|+|+|.  .|++  .|.+...|.+|++ +|++++||.+
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   45 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGW--RFSRSDELSRHRR-SHSGVKPSGP   45 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCC--EESSHHHHHHHHT-TSCCCCSCSS
T ss_pred             CCCCCcCCCCCeECCCCCCCC--ccCCHHHHHHHHH-HhCCCCCCCC
Confidence            467899999999998  8999  9999999999999 9999999986

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=9.3e-08  Score=62.00  Aligned_cols=30  Identities=20%  Similarity=0.388  Sum_probs=25.6

Q ss_pred             CcccccCc--CCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|||+|++  |+|+|.+++.|++|+++|+++.
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45778875  9999999999999999999863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=3.6e-08  Score=64.58  Aligned_cols=41  Identities=15%  Similarity=0.118  Sum_probs=38.5

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .+++|+++++|+|..|++  .|.+...|.+|++ +|+++++|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGK--SFSGSYRLTQHWI-THTREKPSGP   43 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCC--CCSSHHHHHHHHT-HHHHCCCCSC
T ss_pred             CCCCCCCCCCeeCCCCCc--ccCCHHHHHHHHH-HcCCCCCCCC
Confidence            478899999999999999  9999999999999 8999999985

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=1.1e-07  Score=55.59  Aligned_cols=30  Identities=23%  Similarity=0.629  Sum_probs=27.1

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|.|..|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            468999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.9e-08  Score=61.71  Aligned_cols=37  Identities=5%  Similarity=-0.094  Sum_probs=34.1

Q ss_pred             hhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           71 MNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        71 ~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      |++|+++++|+|..|++  .|.+.+.|.+|++ +|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k--~f~~~~~l~~H~~-~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEK--SFSEDRLIKSHIK-TNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTE--ECSSHHHHHHHHH-HHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCC--ccCCHHHHHHHHH-HHcCCCC
Confidence            46899999999999999  9999999999999 8988775

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.2e-07  Score=58.48  Aligned_cols=29  Identities=28%  Similarity=0.541  Sum_probs=22.8

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |+|+|.+|++.|.....|.+|+++|+++|
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46777788888888888888888888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.38  E-value=1.2e-07  Score=55.32  Aligned_cols=29  Identities=24%  Similarity=0.511  Sum_probs=26.6

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||+|+.|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999875

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.37  E-value=6e-08  Score=62.81  Aligned_cols=39  Identities=5%  Similarity=-0.136  Sum_probs=36.9

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      ++|+++++|+|..|++  .|.+.+.|.+|++ +|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDC--RFSEEASLKRHTL-QTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCC--CBSSHHHHHHHHH-HHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCC--eeCChHHHHHHHH-hhCCCCCccC
Confidence            5799999999999999  9999999999999 8999999975

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.6e-07  Score=57.75  Aligned_cols=30  Identities=30%  Similarity=0.496  Sum_probs=26.1

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|+|++|++.|.+...|.+|+++|++||
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            456788899999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=1.6e-07  Score=54.57  Aligned_cols=29  Identities=24%  Similarity=0.681  Sum_probs=26.8

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |+|+|++|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=1.1e-07  Score=59.51  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=28.1

Q ss_pred             CcccccC--cCCcccCCchhhhhhhhhcCCCcccc
Q 040647           49 GKVYECR--FCSLKFCKSQALGGHMNRHRQERETE   81 (286)
Q Consensus        49 eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeKPy~   81 (286)
                      +|+|+|.  .|++.|.+.+.|.+|+++|+++++|.
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4567888  49999999999999999999999873

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=2.4e-07  Score=55.55  Aligned_cols=30  Identities=23%  Similarity=0.551  Sum_probs=27.1

Q ss_pred             CcccccC--cCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECR--FCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|||.|.  .|++.|.....|.+|+++|+++|
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4688998  89999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=1.5e-07  Score=62.28  Aligned_cols=40  Identities=23%  Similarity=0.449  Sum_probs=31.5

Q ss_pred             hhhhhhccCCCCccCCCCCCcccccC--cCCcccCCchhhhhhhhhcCCCc
Q 040647           30 GAGHRKKKSGAKDGKDDECGKVYECR--FCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        30 L~~H~r~HtGeKpf~C~~~eKPy~C~--~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +..|+.+|+++|         +|+|+  .|++.|.+.+.|.+|+++|+++|
T Consensus         6 ~~~~~~~H~~~k---------~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDK---------TFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTT---------EEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCC---------CeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445566788866         56664  59999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.5e-07  Score=57.94  Aligned_cols=30  Identities=33%  Similarity=0.639  Sum_probs=25.5

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|+|.+|++.|.....|.+|+++|+++|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            346788889999999999999999998875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.3e-07  Score=59.12  Aligned_cols=34  Identities=21%  Similarity=0.441  Sum_probs=25.2

Q ss_pred             hccCCCCccCCCCCCcccccCcCCcccCCchhhhhh-hhhcCCC
Q 040647           35 KKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGH-MNRHRQE   77 (286)
Q Consensus        35 r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H-~r~Htge   77 (286)
                      ++|+++|         ||+|+.|++.|.....|.+| +++|+++
T Consensus         2 ~~H~~~k---------~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGH---------LYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSC---------EEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCc---------CeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4666654         56777788888888888888 7888765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.8e-07  Score=57.77  Aligned_cols=30  Identities=37%  Similarity=0.765  Sum_probs=25.1

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|+|.+|++.|.+...|.+|+++|+++|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            346788889999999999999999998875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=1.6e-07  Score=54.32  Aligned_cols=29  Identities=28%  Similarity=0.507  Sum_probs=26.9

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||+|..|++.|.....|..|+++|++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=1.7e-07  Score=57.81  Aligned_cols=30  Identities=30%  Similarity=0.775  Sum_probs=26.3

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|+|+.|++.|.....|.+|+++|+++|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            457888899999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.31  E-value=2.5e-07  Score=55.14  Aligned_cols=29  Identities=28%  Similarity=0.724  Sum_probs=26.1

Q ss_pred             cccccC--cCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECR--FCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~--~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||+|+  .|++.|...+.|..|+++|+++|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            578887  89999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=7.8e-08  Score=56.34  Aligned_cols=29  Identities=28%  Similarity=0.621  Sum_probs=25.7

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||+|.+|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            57899999999999999999999998875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.30  E-value=2.8e-07  Score=53.69  Aligned_cols=30  Identities=23%  Similarity=0.696  Sum_probs=27.4

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      |+|+|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            579999999999999999999999998864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.30  E-value=1.9e-07  Score=58.90  Aligned_cols=37  Identities=14%  Similarity=-0.041  Sum_probs=34.0

Q ss_pred             cCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           74 HRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        74 HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |+++++|+|..|++  .|...+.|..|++ +|+++++|..
T Consensus         1 h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKR--EFRSAQALGGHMN-VHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCC--EESSHHHHHHHHH-TTCCSCTTTT
T ss_pred             CCCCCceECCCCCc--ccCCHHHHHHHHH-HcCCCcccee
Confidence            68999999999999  9999999999999 9999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=8.6e-08  Score=56.24  Aligned_cols=30  Identities=33%  Similarity=0.580  Sum_probs=26.1

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|+|..|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            368899999999999999999999998875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=1.5e-07  Score=54.60  Aligned_cols=29  Identities=31%  Similarity=0.565  Sum_probs=26.9

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |+|+|.+|++.|.....|..|+++|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57999999999999999999999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.28  E-value=1.7e-07  Score=57.32  Aligned_cols=35  Identities=14%  Similarity=-0.032  Sum_probs=32.4

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      +|+++|+|+|..|++  .|...+.|.+|++ +|++++|
T Consensus         1 ~H~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLS--AFTTKANCARHLK-VHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCC--EESSHHHHHHHHG-GGTSCCC
T ss_pred             CCCCCcCeeCCCCCc--ccCCHHHHHHHHH-HcCCCCC
Confidence            589999999999999  9999999999999 8988764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.27  E-value=2.8e-07  Score=61.49  Aligned_cols=30  Identities=30%  Similarity=0.600  Sum_probs=22.7

Q ss_pred             cccccCcCCcccCCchhhhhhhh-hcCCCcc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMN-RHRQERE   79 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r-~HtgeKP   79 (286)
                      |+|+|.+|+|.|.+..+|.+|++ +|+++..
T Consensus         6 kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            6 KPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             SCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             cCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            45777888888888888999988 8888754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.25  E-value=1.6e-07  Score=57.21  Aligned_cols=35  Identities=9%  Similarity=-0.112  Sum_probs=32.2

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      +|+++++|+|..|++  .|.+.+.|.+|++ +|++++|
T Consensus         1 ~h~~~k~~~C~~C~k--~f~~~~~L~~H~~-~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLK--KFVSSIRLRSHIR-EVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCC--EESSHHHHHHHHH-HTSCTTC
T ss_pred             CCCCCCCeECCCCcc--hhCCHHHHHHHHH-HHcCCCC
Confidence            589999999999999  9999999999999 8988764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=4.8e-07  Score=53.03  Aligned_cols=29  Identities=28%  Similarity=0.547  Sum_probs=25.3

Q ss_pred             cccccCcCCcccCCchhhhhh-hhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGH-MNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H-~r~HtgeK   78 (286)
                      |+|+|..|++.|.+.+.|.+| +++|++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            578899999999999999999 78998875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.24  E-value=3e-07  Score=59.05  Aligned_cols=31  Identities=16%  Similarity=0.323  Sum_probs=26.6

Q ss_pred             CCcccccCcCCcccCCchhhhhhhhhcCCCcccccCCC
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNK   85 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~C   85 (286)
                      +||||+|++|+|+|.+.++|.+|+       ||+|..+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH-------HHTSTTC
T ss_pred             CccCeECCCCCCccCCHhHccCcC-------CeECcCC
Confidence            467899999999999999999998       8888653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=1.4e-07  Score=61.35  Aligned_cols=39  Identities=13%  Similarity=0.086  Sum_probs=36.6

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .+|+++|+|+|.+|++  .|.+.+.|.+|++ +|+++++|.+
T Consensus         3 ~~h~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~~~~~C   41 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGL--RFKRKDRMSYHVR-SHDGSVGKSG   41 (45)
T ss_dssp             CCCSSCCSSEETTTTE--ECSCHHHHHHHHH-HHSCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCc--ccCCHHHHHHHHH-HccCCCCCCC
Confidence            4799999999999999  9999999999999 8999999975

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=4.4e-07  Score=52.55  Aligned_cols=28  Identities=21%  Similarity=0.539  Sum_probs=24.1

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      +|+|+|+.|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4688899999999999999999998874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=4.9e-07  Score=52.10  Aligned_cols=27  Identities=22%  Similarity=0.519  Sum_probs=24.4

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      +|||+|..|++.|.....|.+|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999885

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=4.1e-07  Score=52.79  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=23.4

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      +|||+|..|++.|.+.+.|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468899999999999999999998885

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.17  E-value=4.2e-07  Score=56.78  Aligned_cols=30  Identities=30%  Similarity=0.536  Sum_probs=25.1

Q ss_pred             CcccccCc--CCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+|+|.+  |++.|...+.|.+|+++|+++|
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            34677774  9999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.17  E-value=8.1e-07  Score=50.82  Aligned_cols=27  Identities=30%  Similarity=0.726  Sum_probs=23.3

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ||+|..|++.|.+...|.+|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            588999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=2.4e-07  Score=57.98  Aligned_cols=35  Identities=6%  Similarity=-0.218  Sum_probs=31.5

Q ss_pred             hhhcCCCcccccCCCCcccccCCchhhhhc-CCCCCCCC
Q 040647           71 MNRHRQERETETLNKARQLVFQHNDNLAVQ-GPPPHLGC  108 (286)
Q Consensus        71 ~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H-~r~~H~g~  108 (286)
                      |++|+++|||+|..|++  .|.+.+.|.+| ++ +|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k--~f~~~~~L~~H~~~-~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHY--SSITKNCLKRHVIQ-KHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSC--EEECHHHHHHHHHH-HTCCC
T ss_pred             CCccCCCcCeECCCCCc--ccCCHHHHHHHHHH-HccCc
Confidence            46899999999999999  99999999999 77 78754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=6.5e-07  Score=55.13  Aligned_cols=35  Identities=9%  Similarity=-0.137  Sum_probs=31.9

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +.|+++++|+|..|++  .|.+.+.|.+|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICER--KFKNELDRDRHML-VHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCC--EESSHHHHHHHHT-TTSTTC
T ss_pred             CCCCCCCCeECCCCCC--ccCCHHHHHHHHH-HhcCCC
Confidence            4689999999999999  9999999999999 888764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=7.5e-07  Score=60.51  Aligned_cols=37  Identities=14%  Similarity=0.096  Sum_probs=31.7

Q ss_pred             hhcccccCCCchhhhhhh-ccCCCCccCCCCCCcccccCcCCcccCC
Q 040647           18 KQVLDESSSTGAGAGHRK-KKSGAKDGKDDECGKVYECRFCSLKFCK   63 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r-~HtGeKpf~C~~~eKPy~C~~Cgk~F~~   63 (286)
                      ..|++.|.+...|.+|++ +|+++++         |+|++|++.|.+
T Consensus        16 ~~C~k~f~~~~~L~~H~~~~H~~~k~---------~~C~~C~k~F~~   53 (54)
T 2eps_A           16 QSCGKGFSRPDHLNGHIKQVHTSERP---------HKCQVWVSGPSS   53 (54)
T ss_dssp             SSSCCEESSHHHHHHHHHHTSCCCCC---------CCSSSSCCSSCC
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCCCC---------ccCCCCCCCCCC
Confidence            889999999999999997 9998764         666778888865

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.11  E-value=9.8e-07  Score=64.11  Aligned_cols=31  Identities=19%  Similarity=0.414  Sum_probs=25.3

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      +|||+|.+|+|.|.+...|.+|+++|++++.
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            4567788888899999899999999988653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=9.4e-07  Score=65.45  Aligned_cols=41  Identities=17%  Similarity=0.122  Sum_probs=35.8

Q ss_pred             hcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCCCCCCCCC
Q 040647           73 RHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGCHPMTPGS  115 (286)
Q Consensus        73 ~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~~  115 (286)
                      .+++||||+|.+  |++  +|.+.++|++|++.+|+++||+-+..
T Consensus        21 ~~sGEKPYkC~~~~CgK--aFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFA--AFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCC--BCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcCh--hHcCHHHHHHHhhhhCCCCCCccccc
Confidence            468999999975  999  99999999999732899999998754

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=4.2e-07  Score=56.39  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=31.8

Q ss_pred             hhcCCCcccccCCCCcccccCCc-hhhhhcCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHN-DNLAVQGPPPHLGCH  109 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~-s~L~~H~r~~H~g~k  109 (286)
                      ++|+++++|+|..|++  .|.+. +.|.+|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k--~f~~~~~~L~~H~~-~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDF--YFMKNGSDLQRHIW-AHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSC--EECSSCHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCeECCCCCh--hhccCHHHHHHHHH-hcCCCC
Confidence            5799999999999999  99999 99999998 887654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=5.7e-07  Score=51.35  Aligned_cols=26  Identities=35%  Similarity=0.759  Sum_probs=22.1

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |||+|++|++.|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57888889999999888999988874

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=1.3e-06  Score=57.71  Aligned_cols=38  Identities=16%  Similarity=0.245  Sum_probs=35.8

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      .|+++++|+|.+|++  .|.+...|.+|++ +|++++||.+
T Consensus         6 ~~~~~k~~~C~~C~k--~f~~~~~L~~H~~-~H~~~k~~~C   43 (48)
T 2epr_A            6 SGRTRKQVACEICGK--IFRDVYHLNRHKL-SHSGEKPYSS   43 (48)
T ss_dssp             CCCCCCSEEETTTTE--EESSHHHHHHHGG-GSCSCCCCCS
T ss_pred             CCCCCcCeeCCCCCc--ccCCHHHHHHHHH-hcCCCCCccC
Confidence            578999999999999  9999999999999 9999999985

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=7.1e-07  Score=54.94  Aligned_cols=35  Identities=9%  Similarity=-0.056  Sum_probs=31.7

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +.|+++++|+|..|++  .|...+.|.+|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEY--ATRSKSNLKAHMN-RHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSC--EESCHHHHHHHHH-HSSTTC
T ss_pred             CCCCCCCCccCCCCCc--hhCCHHHHHHHHH-HhccCC
Confidence            4689999999999999  9999999999998 888764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=5e-07  Score=56.36  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=33.1

Q ss_pred             cCCCcccccC--CCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           74 HRQERETETL--NKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        74 HtgeKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      |+++|+|+|.  .|++  .|.+.++|++|++ +|+++++|.
T Consensus         1 H~~~k~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQ--RFTNEDHLAVHKH-KHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCC--EESSHHHHHHHHH-HHHTTTTTC
T ss_pred             CCCCcceECCCCCCCc--ccCCHHHHHHHHH-HhCCCCCCC
Confidence            7899999999  5999  9999999999999 899998873

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.00  E-value=4.3e-07  Score=63.78  Aligned_cols=41  Identities=2%  Similarity=-0.157  Sum_probs=37.3

Q ss_pred             hhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           67 LGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        67 L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      |..|+++|++++||+|..|++  .|.+.+.|.   + +|.++++|.|
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k--~F~~~~~l~---~-~H~~~k~~~C   42 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSS--TFTDLEANQ---L-FDPMTGTFRC   42 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCC--EEEHHHHHH---H-EETTTTEEBC
T ss_pred             hhhHHHHcCCCCCccCCCCCc--hhccHHHhH---h-hcCCCCCEEC
Confidence            678999999999999999999  999888887   5 7999999985

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=6.4e-07  Score=59.23  Aligned_cols=41  Identities=15%  Similarity=0.159  Sum_probs=35.3

Q ss_pred             hhhhhhhhcCCCcccccC--CCCcccccCCchhhhhcCCCCCCCCC
Q 040647           66 ALGGHMNRHRQERETETL--NKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        66 ~L~~H~r~HtgeKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      .+..|+.+|+++|+|+|.  .|++  .|.+.++|++|++ +|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k--~F~~~~~L~~H~~-~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTK--TFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCC--EECSSSSHHHHHH-HHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCC--ccCCHHHHHHHHH-HccCCC
Confidence            345666789999999996  7999  9999999999999 888764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=8.6e-07  Score=54.34  Aligned_cols=35  Identities=14%  Similarity=0.049  Sum_probs=31.6

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      .+|+++++|+|..|++  .|.....|.+|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSY--ASAIKANLNVHLR-KHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSC--EESSHHHHHHHHH-HHTCCC
T ss_pred             CCCCCCCCCCCCCCCc--ccCCHHHHHHHHH-HccCCC
Confidence            3689999999999999  9999999999998 888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.97  E-value=1.1e-06  Score=58.53  Aligned_cols=35  Identities=9%  Similarity=0.109  Sum_probs=29.6

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +|+++|+|+|.+|++  .|.+..+|.+|++.+|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k--~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGK--RYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCC--EESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCc--ccCCHHHHHHHhhhhcCCCC
Confidence            589999999999999  99999999999874687654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.97  E-value=1.5e-06  Score=52.53  Aligned_cols=32  Identities=9%  Similarity=-0.005  Sum_probs=29.7

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      |||+|..|++  .|.+.++|.+|++ +|++++|+.
T Consensus         1 kp~~C~~C~k--~f~~~~~L~~H~~-~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPK--RFMRSDALSKHIK-TAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCT--THHHHHTTSSSTT-SSSSSSSCC
T ss_pred             CCCCCCCCCc--ccCCHHHHHHHHH-HHccCCCCC
Confidence            5899999999  9999999999999 999999873

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=1.3e-06  Score=53.53  Aligned_cols=34  Identities=9%  Similarity=-0.022  Sum_probs=31.2

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +|+++++|+|..|++  .|.+...|.+|++ +|++++
T Consensus         3 ~h~~~~~~~C~~C~k--~f~~~~~l~~H~~-~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGK--KFKSKGTLKSHKL-LHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCC--BCSSHHHHHHHHH-HHSSCC
T ss_pred             CCCCCCCeecCcCCC--CcCchHHHHHHHH-HhcCCC
Confidence            589999999999999  9999999999999 888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=1.6e-06  Score=56.06  Aligned_cols=33  Identities=6%  Similarity=-0.170  Sum_probs=30.1

Q ss_pred             hcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCC
Q 040647           73 RHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        73 ~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      .|++||||+|.+  |++  +|.++++|++|++ +|+++
T Consensus         3 ~~~gekp~~C~~~~C~k--~F~~~~~L~~H~r-~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDY--STPDKYKLQAHLK-VHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCC--EESCHHHHHHHHH-HHSCC
T ss_pred             CCCCCCCCCCCCCCCCC--ccCCHHHHHHHHH-hcCCC
Confidence            478999999986  999  9999999999999 89875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=4.5e-06  Score=48.17  Aligned_cols=27  Identities=30%  Similarity=0.550  Sum_probs=24.3

Q ss_pred             cccccC--cCCcccCCchhhhhhhhhcCC
Q 040647           50 KVYECR--FCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        50 KPy~C~--~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      |+|+|.  .|++.|...+.|.+|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            578999  999999999999999999974

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.84  E-value=2.5e-06  Score=51.96  Aligned_cols=32  Identities=13%  Similarity=-0.018  Sum_probs=30.2

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      |||+|.+|++  .|.+.++|..|++ +|+++++|.
T Consensus         1 kp~~C~~C~k--~F~~~~~L~~H~~-~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPK--RFMRSDHLSKHIT-LHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCC--CCSSHHHHHHHHH-HHTTTCCCC
T ss_pred             CcccCCCCCc--hhCCHHHHHHHHH-HhCCCCCCC
Confidence            6899999999  9999999999999 999999885

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.83  E-value=2.3e-06  Score=52.61  Aligned_cols=34  Identities=12%  Similarity=0.042  Sum_probs=30.9

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      .|+++++|+|..|++  .|.....|.+|++ +|++++
T Consensus         3 ~~~~~k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNK--VFKFKHSLQAHLR-IHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCC--EESSHHHHHHHHH-HHCCCC
T ss_pred             CCCCCCCEECCCCCc--eeCCHHHHHHHHH-HhCCCC
Confidence            578999999999999  9999999999999 888764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.83  E-value=3.1e-07  Score=69.91  Aligned_cols=45  Identities=9%  Similarity=-0.138  Sum_probs=39.8

Q ss_pred             hhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCCCC
Q 040647           68 GGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTPGS  115 (286)
Q Consensus        68 ~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~~~  115 (286)
                      ..|+++|+++++|+|.+|++  .|.+.+.|.+|++ +|++++||.|..
T Consensus        14 ~~~~~~H~~~kpy~C~~C~k--~F~~~~~L~~H~~-~Ht~ekp~~C~~   58 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKHCDS--KLQSTAELTSHLN-IHNEEFQKRAKR   58 (88)
T ss_dssp             CCCCCSCCCCSCEECSSSCC--EESSHHHHHHHHH-HHHHHHHHHCCC
T ss_pred             eccccccCCCCCCcCCCCCC--EeCCHHHHHHHHH-HhCCCCCcccch
Confidence            34456799999999999999  9999999999999 899999988754

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.67  E-value=2.6e-05  Score=56.44  Aligned_cols=36  Identities=14%  Similarity=0.022  Sum_probs=32.3

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHP  110 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP  110 (286)
                      ..|+++|||+|..|++  .|.+.++|++|++ +|++++.
T Consensus         6 ~~~~~ekpy~C~~CgK--~F~~~s~L~~H~r-~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGK--VFTDANRLRQHEA-QHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCC--CCSCHHHHHHHHH-HHTTTSC
T ss_pred             CCCCCccCcCCCCCCC--ccCCHHHHHhhhh-hhCCCcc
Confidence            4588999999999999  9999999999999 8988643

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.65  E-value=4.7e-06  Score=51.84  Aligned_cols=34  Identities=12%  Similarity=0.105  Sum_probs=30.4

Q ss_pred             hcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCCC
Q 040647           73 RHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        73 ~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      .|+++|+|+|..  |++  .|.+.+.|.+|++ +|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGK--VYGKTSHLRAHLR-WHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCC--EESCHHHHHHHHH-HHHTTC
T ss_pred             CCCCCCCCCCCCCCCCC--ccCCHHHHHHHHH-hcCCCC
Confidence            488999999984  999  9999999999999 888764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.58  E-value=1.5e-05  Score=46.03  Aligned_cols=30  Identities=10%  Similarity=-0.075  Sum_probs=27.2

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +++|+|..|++  .|.....|..|++ +|++++
T Consensus         1 ~k~~~C~~C~~--~f~~~~~l~~H~~-~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGR--SFSDPTSKMRHLE-THDTDK   30 (30)
T ss_dssp             CCCEECTTTCC--EESCHHHHHHHHH-TTCCCC
T ss_pred             CcCccCCCCCc--ccCCHHHHHHHHH-HhccCC
Confidence            58999999999  9999999999999 888764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.52  E-value=1.8e-05  Score=50.56  Aligned_cols=27  Identities=11%  Similarity=0.030  Sum_probs=25.3

Q ss_pred             cCCCcccccCCCCcccccCCchhhhhcCC
Q 040647           74 HRQERETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        74 HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      +++||||+|.+|++  +|++.++|++|+.
T Consensus         3 ~~gekp~~C~~CgK--~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGI--AFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTE--ECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCC--ccCCHhHccCcCC
Confidence            67999999999999  9999999999973

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.64  E-value=1.4e-05  Score=46.32  Aligned_cols=30  Identities=17%  Similarity=0.128  Sum_probs=26.9

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +|+|+|..|++  .|.....|..|++ +|++++
T Consensus         1 ~k~~~C~~C~k--~f~~~~~l~~H~~-~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQR--QFADPGALQRHVR-IHTGEK   30 (30)
Confidence            57999999999  9999999999999 887653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.49  E-value=6.4e-05  Score=43.52  Aligned_cols=29  Identities=21%  Similarity=0.108  Sum_probs=26.0

Q ss_pred             cccccCCCCcccccCCchhhhhc-CCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQ-GPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H-~r~~H~g~k  109 (286)
                      |+|+|..|++  .|.+.+.|..| ++ +|++++
T Consensus         1 k~~~C~~C~k--~f~~~~~l~~H~~~-~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNR--AFTRRDLLIRHAQK-IHSGNL   30 (30)
T ss_dssp             CCSBCTTTCC--BCSSSHHHHHHHTT-TSCCCC
T ss_pred             CCcCCcccCc--ccCChHHHHHHHHH-HccCCC
Confidence            5899999999  99999999999 77 898764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.47  E-value=3.3e-05  Score=45.83  Aligned_cols=30  Identities=17%  Similarity=0.162  Sum_probs=27.2

Q ss_pred             CcccccC--CCCcccccCCchhhhhcCCCCCCCCC
Q 040647           77 ERETETL--NKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        77 eKPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      +|||+|.  .|++  .|.+.+.|.+|++ +|++++
T Consensus         1 ek~~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDK--AFVRNHDLIRHKK-SHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCC--CBSSSHHHHHHHG-GGTCCC
T ss_pred             CCCCcCcCCCCCC--ccCCHHHHHHHHH-HccCCC
Confidence            5899999  8999  9999999999999 898764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.47  E-value=2.9e-05  Score=44.69  Aligned_cols=29  Identities=14%  Similarity=0.080  Sum_probs=26.4

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||+|..|++  .|...+.|..|++ +|++++
T Consensus         1 k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPK--RFMRSDHLTLHIL-LHENKK   29 (29)
T ss_dssp             CCEECSSSSC--EESCSHHHHHHHT-GGGSCC
T ss_pred             CCccCCCCCc--hhCCHHHHHHHHH-HhcCCC
Confidence            6899999999  9999999999999 888764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.46  E-value=3.5e-05  Score=44.16  Aligned_cols=28  Identities=14%  Similarity=0.120  Sum_probs=25.4

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||+|+|..|++  .|...+.|..|++ +|++
T Consensus         1 ~k~~~C~~C~k--~f~~~~~l~~H~~-~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGK--RFSLKHQMETHYR-VHTG   28 (28)
T ss_dssp             CCSEECSSSCC--EESCHHHHHHHHT-TSCC
T ss_pred             CcCccCCCCCc--ccCCHHHHHHHHH-hcCC
Confidence            58999999999  9999999999999 7763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.56  E-value=1.9e-05  Score=45.67  Aligned_cols=29  Identities=14%  Similarity=0.247  Sum_probs=26.2

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||+|..|++  .|...+.|..|++ +|++++
T Consensus         1 k~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGK--AFTQASSLIAHVR-QHTGEK   29 (29)
Confidence            5899999999  9999999999999 888754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.42  E-value=3e-05  Score=44.53  Aligned_cols=27  Identities=4%  Similarity=-0.213  Sum_probs=24.6

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      +|||+|..|++  .|.+.+.|.+|++ +|+
T Consensus         1 ~k~~~C~~C~k--~f~~~~~l~~H~~-~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRA--GCPSLASMQAHMR-GHS   27 (27)
T ss_dssp             CCTEEETTTTE--EESCHHHHHHHHT-TCC
T ss_pred             CcCcCCCCCCc--ccCCHHHHHHHHH-hcC
Confidence            58999999999  9999999999998 663

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.40  E-value=5.6e-05  Score=44.53  Aligned_cols=29  Identities=21%  Similarity=0.224  Sum_probs=26.4

Q ss_pred             cccccC--CCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETL--NKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||+|.  .|++  .|.+.+.|.+|++ +|++++
T Consensus         1 kp~~C~~~~C~k--~f~~~~~L~~H~~-~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGK--RFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCC--BCSSHHHHHHHHT-TTSCCC
T ss_pred             CCcCCcCCCCCc--ccCCHhHHHHHHH-HhcCCC
Confidence            589998  9999  9999999999999 898764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.34  E-value=2.6e-05  Score=57.15  Aligned_cols=49  Identities=20%  Similarity=0.147  Sum_probs=41.9

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      ..|++.| ....|..|+ +|.+++         ++.|..|++.|. ...|..|+++|++++
T Consensus        21 ~~C~~~~-~~~~L~~H~-~~c~~~---------~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           21 QHCDLEL-SILKLKEHE-DYCGAR---------TELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             SSSCCEE-CHHHHHHHH-HHHHHC---------EEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             cccChHh-hHHHHHHHH-hHcCCC---------ceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            7899999 488999999 898866         577778999887 489999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.25  E-value=3.8e-05  Score=44.06  Aligned_cols=29  Identities=17%  Similarity=0.127  Sum_probs=26.0

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      ++|+|..|++  .|...+.|..|++ +|++++
T Consensus         1 k~~~C~~C~~--~f~~~~~l~~H~~-~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTR--AFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCCBCTTTCC--BCSSHHHHHHHHH-HHSCCC
T ss_pred             CCeECCCCCc--ccCCHHHHHHHHH-HhcCCC
Confidence            5899999999  9999999999999 787653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.25  E-value=3.7e-05  Score=43.86  Aligned_cols=27  Identities=7%  Similarity=-0.112  Sum_probs=24.3

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      ||+|+|..|++  .|.+.+.|..|++ +|+
T Consensus         1 ek~~~C~~C~k--~f~~~~~l~~H~~-~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQ--RSRDFSAMTKHLR-THG   27 (27)
T ss_dssp             CCCEECSSSSC--EESSHHHHHHHHH-HCC
T ss_pred             CcCccCCCcCh--hhCCHHHHHHHHH-Hcc
Confidence            58999999999  9999999999988 553

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.24  E-value=4.7e-05  Score=43.81  Aligned_cols=29  Identities=7%  Similarity=-0.112  Sum_probs=26.1

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |+|+|..|++  .|...+.|..|++ +|.+++
T Consensus         1 k~~~C~~C~k--~f~~~~~l~~H~~-~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEF--RSADSSNLKTHIK-TKHSKE   29 (30)
T ss_dssp             CCCCCSSSSC--CCSCSHHHHHHHH-HHTSSC
T ss_pred             CCccCCCCCC--ccCCHHHHHHHHH-HHccCC
Confidence            5899999999  9999999999999 787765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.21  E-value=3.6e-05  Score=43.96  Aligned_cols=29  Identities=17%  Similarity=0.187  Sum_probs=25.8

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||+|..|++  .|.....|..|++ +|++++
T Consensus         1 k~~~C~~C~~--~f~~~~~l~~H~~-~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDK--KFNQVGNLKAHLK-IHIADG   29 (29)
T ss_dssp             CCCCCSSCCC--CCCTTTHHHHHHH-HHHSCC
T ss_pred             CCCcCCCCCc--ccCCHHHHHHHHH-HhccCC
Confidence            6899999999  9999999999998 787653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.13  E-value=3.6e-05  Score=44.05  Aligned_cols=29  Identities=17%  Similarity=0.117  Sum_probs=26.0

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      ++|+|..|++  .|.....|..|++ +|++++
T Consensus         1 ~~~~C~~C~k--~f~~~~~l~~H~~-~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGK--QFTTSGNLKRHLR-IHSGEK   29 (29)
T ss_dssp             CCEECTTTSC--EESCHHHHHHHHH-HHHTCC
T ss_pred             CCccCCCCCC--ccCChhHHHHHHH-HhcCCC
Confidence            5899999999  9999999999998 787654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.21  E-value=6.8e-05  Score=42.32  Aligned_cols=25  Identities=16%  Similarity=0.102  Sum_probs=23.2

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      |||+|..|++  .|.+.+.|..|++ +|
T Consensus         1 kp~~C~~C~k--~f~~~~~l~~H~~-~H   25 (26)
T 2lvu_A            1 KPYVCERCGK--RFVQSSQLANHIR-HH   25 (26)
Confidence            6899999999  9999999999998 66

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.13  E-value=0.00013  Score=41.21  Aligned_cols=26  Identities=15%  Similarity=0.061  Sum_probs=23.3

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||+|..|++  .|.+.+.|.+|++ +|++
T Consensus         1 ~~~C~~C~k--~f~~~~~l~~H~~-~h~~   26 (27)
T 1znf_A            1 XYKCGLCER--SFVEKSALSRHQR-VHKN   26 (27)
T ss_dssp             -CBCSSSCC--BCSSHHHHHHHGG-GTCC
T ss_pred             CccCCCCCC--cCCCHHHHHHHHH-HcCC
Confidence            589999999  9999999999999 7875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.48  E-value=0.00041  Score=39.47  Aligned_cols=27  Identities=22%  Similarity=0.177  Sum_probs=24.2

Q ss_pred             cccccC--CCCcccccCCchhhhhcCCCCCCC
Q 040647           78 RETETL--NKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        78 KPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      |+|+|.  .|++  .|...+.|.+|++ +|++
T Consensus         1 k~~~C~~~~C~k--~f~~~~~l~~H~~-~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGR--SFNDRRKLNRHKK-IHTG   29 (29)
T ss_dssp             CCEEECSTTTCE--EESSHHHHHHHHG-GGTC
T ss_pred             CCCCCcCCcCcC--ccCCHHHHHHHHH-HhCC
Confidence            579999  9999  9999999999998 7753

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.46  E-value=0.00071  Score=48.33  Aligned_cols=53  Identities=17%  Similarity=0.123  Sum_probs=26.4

Q ss_pred             hhcccccCCCchhhhhh-hccCCCCccCCCCCCcccccC--cCCcccCCchhhhhhhhh
Q 040647           18 KQVLDESSSTGAGAGHR-KKKSGAKDGKDDECGKVYECR--FCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~-r~HtGeKpf~C~~~eKPy~C~--~Cgk~F~~ss~L~~H~r~   73 (286)
                      ..|++.|.+...|..|+ +.|.+.++-   ...+.|.|.  .|++.+.....|..|+++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~---~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFK---HPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCC---CSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccC---CCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            35566666666666665 355554310   011234443  355555555556555554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.21  E-value=0.0017  Score=46.29  Aligned_cols=45  Identities=9%  Similarity=0.011  Sum_probs=39.4

Q ss_pred             cCCcccCCchhhhhhh-hhcCCCc------ccccC--CCCcccccCCchhhhhcCC
Q 040647           56 FCSLKFCKSQALGGHM-NRHRQER------ETETL--NKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        56 ~Cgk~F~~ss~L~~H~-r~HtgeK------Py~C~--~Cgr~~sFs~~s~L~~H~r  102 (286)
                      .|++.|.+...|..|+ +.|.+.+      +|.|.  .|++  .+.....|..|++
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~--~~~~~~~L~~Hir   61 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDF--LGDDTASIVNHIN   61 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCC--EESSHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcC--CCCChHHHHhhcc
Confidence            3999999999999998 5898776      89997  7888  8888889999987

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.44  E-value=0.0093  Score=48.38  Aligned_cols=26  Identities=27%  Similarity=0.503  Sum_probs=22.6

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      +++|.|..|+|.|.+...|..|+++.
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CcceEcccCcchhCCHHHHHHHHhhh
Confidence            45788999999999999999998753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.43  E-value=0.0096  Score=48.28  Aligned_cols=31  Identities=19%  Similarity=0.031  Sum_probs=28.6

Q ss_pred             hhhhcCCCcccccCCCCcccccCCchhhhhcCC
Q 040647           70 HMNRHRQERETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        70 H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      +.-.|+|+++|.|..|++  .|.+..+|..|++
T Consensus        41 ~ded~tGekpfyC~~C~K--~F~~~~~L~~H~r   71 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACAR--YFIDSTNLKTHFR   71 (124)
T ss_dssp             SCSSSGGGGCSEETTTTE--ECSSHHHHHHHTT
T ss_pred             ccccCCCCcceEcccCcc--hhCCHHHHHHHHh
Confidence            445689999999999999  9999999999998

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=92.51  E-value=0.053  Score=43.62  Aligned_cols=77  Identities=10%  Similarity=-0.082  Sum_probs=43.3

Q ss_pred             hhhhcccccCCCchhhhhh--hccCCC-CccCCCCC-CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCccccc
Q 040647           16 YSKQVLDESSSTGAGAGHR--KKKSGA-KDGKDDEC-GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVF   91 (286)
Q Consensus        16 ~~~~C~k~F~~~s~L~~H~--r~HtGe-Kpf~C~~~-eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sF   91 (286)
                      +|..|...|.+.+.+..|.  +.|... +.+.+..+ +.+    .=++.+...    .+...+...+.|.|..|.+  .|
T Consensus        34 ~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~~~~~C~~C~~--~f  103 (127)
T 1zu1_A           34 QCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDS----VPAKKFKAA----PAEISDGEDRSKCCPVCNM--TF  103 (127)
T ss_dssp             EETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCC----CSCCCCSCC----SSCCSSCCCTTTEETTTTE--EC
T ss_pred             cCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccC----CCCCccCCC----ccccccCCCCCeEcCCCCC--Ee
Confidence            3477777777777777777  445321 11111000 000    001222211    1233456678899999999  99


Q ss_pred             CCchhhhhcCC
Q 040647           92 QHNDNLAVQGP  102 (286)
Q Consensus        92 s~~s~L~~H~r  102 (286)
                      .....+..|..
T Consensus       104 ~s~~~~~~H~~  114 (127)
T 1zu1_A          104 SSPVVAESHYI  114 (127)
T ss_dssp             SSHHHHHHHHT
T ss_pred             CCHHHHHHHHC
Confidence            99999988865

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.84  E-value=0.14  Score=34.69  Aligned_cols=23  Identities=35%  Similarity=0.566  Sum_probs=21.2

Q ss_pred             cccccCcCCcccCCchhhhhhhh
Q 040647           50 KVYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      -.|.|+.|++.|.....|++||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            36899999999999999999998

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=84.33  E-value=0.52  Score=38.91  Aligned_cols=58  Identities=12%  Similarity=0.163  Sum_probs=43.5

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      ++..|..|+..+ .+..|..|....=..+...|..|+.  .+. ...|..|.. ++.|..++.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~--~~~-~~~l~~H~~-~~~~~~~~~  166 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAA--SMA-FEDKEIHDQ-NCPLALEHH  166 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCC--EEE-GGGHHHHHT-TCCC-----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCC--ccC-HHHHHhHHH-hCcChhhhh
Confidence            466788999888 4557999988777888899999998  666 568899998 788776543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=84.32  E-value=0.082  Score=42.47  Aligned_cols=25  Identities=16%  Similarity=0.365  Sum_probs=20.7

Q ss_pred             CCcccccCcCCcccCCchhhhhhhh
Q 040647           48 CGKVYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        48 ~eKPy~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      ..+.|.|..|++.|.....+..|.+
T Consensus        90 ~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           90 EDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3467889999999999999988864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-10
d1x6fa1	75	g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462	0.004

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.8 bits (127), Expect = 2e-10
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 50 KVYECRFCSLKFCKSQALGGHMNRHRQERETETL 83
          + Y C FC  +F  +QALGGHMN HR++R    L
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL 37

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.004
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 9/48 (18%)

Query: 49 GKVYECRFCSLKFCKSQALGGHMNRH---------RQERETETLNKAR 87
             Y+C+ C  K   +  L  H+N H         RQER  + L+K +
Sbjct: 16 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQK 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.55
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.17
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.15
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.05
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.01
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.92
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.92
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.9
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.85
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.84
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.81
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.76
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.76
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.74
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.68
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.66
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.65
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.61
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.59
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.49
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.42
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.4
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.34
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.31
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.05
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.93
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.92
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.79
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.79
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.75
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.61
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.58
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.52
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.46
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.36
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.27
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.23
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.06
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.0
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.91
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.86
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.67
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.54
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.53
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.51
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.46
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.36
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.31
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.2
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.18
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.15
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.14
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.9
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.63
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.59
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.2
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.11
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.79
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	94.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	94.26
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.19
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.79
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.52
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.23
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.37
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.22
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.16
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.74
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.7
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.36
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.16
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	90.04
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	89.24
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	88.02
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.52
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	87.52
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	87.29
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.09
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.23
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	84.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	83.86
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	83.25
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	80.95

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=4.8e-16  Score=107.10  Aligned_cols=53  Identities=23%  Similarity=0.334  Sum_probs=50.8

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      ||||+|+ |+|.|....+|..|+++|+++|||+|.+|++  .|.+.+.|.+|++ +|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k--~F~~~~~L~~H~r-~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGK--KFKMKHHLVGHMK-IH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSC--EESSSHHHHHHHT-TT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCC--EecCHHHHHHHHh-cC
Confidence            6899995 9999999999999999999999999999999  9999999999998 66

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1e-12  Score=85.02  Aligned_cols=36  Identities=33%  Similarity=0.658  Sum_probs=33.5

Q ss_pred             CcccccCcCCcccCCchhhhhhhh-hcCCCcccccCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMN-RHRQERETETLN   84 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r-~HtgeKPy~C~~   84 (286)
                      +|||+|++|+|+|.++++|++|++ +|++||||+|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            689999999999999999999976 899999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4.4e-12  Score=81.57  Aligned_cols=37  Identities=24%  Similarity=0.451  Sum_probs=26.9

Q ss_pred             hhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           32 GHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        32 ~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      +|+++|++||         ||+|++|+|+|.+.++|.+|+++||||
T Consensus         2 rH~~~Ht~ek---------py~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERR---------RYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSC---------SSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCC---------CEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4777777755         456667777777777777777777776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=3.6e-12  Score=87.25  Aligned_cols=46  Identities=26%  Similarity=0.411  Sum_probs=43.7

Q ss_pred             cccccCCCchhhhhhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhc
Q 040647           20 VLDESSSTGAGAGHRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        20 C~k~F~~~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~H   74 (286)
                      |++.|..+..|..|+++|+|||         ||+|.+|+++|.+.+.|.+||++|
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ek---------py~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLR---------PYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCC---------SEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCeECCHHHhHHHhhcccccc---------CCcCCCcCCEecCHHHHHHHHhcC
Confidence            9999999999999999999976         588899999999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.6e-11  Score=78.89  Aligned_cols=37  Identities=19%  Similarity=0.279  Sum_probs=35.8

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      +|+++|++||||+|.+|++  +|.+.++|.+|++ +|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK--~F~~~s~L~~H~r-~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGK--SFSHSSDLSKHRR-THTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCC--BCSCHHHHHHHHT-TTCCS
T ss_pred             ccCcccCCCCCEecCCCCc--eeeCHHHHHHhCc-cCCCC
Confidence            7999999999999999999  9999999999999 99986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.05  E-value=2.9e-11  Score=73.18  Aligned_cols=29  Identities=24%  Similarity=0.681  Sum_probs=27.8

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||+|++|+|+|.+.++|++|+++|||||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999997

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5e-11  Score=72.13  Aligned_cols=29  Identities=28%  Similarity=0.706  Sum_probs=27.8

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||.|++|+|+|.++++|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=4.9e-11  Score=74.25  Aligned_cols=33  Identities=36%  Similarity=0.541  Sum_probs=26.6

Q ss_pred             ccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           36 KKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        36 ~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ||||||         ||+|.+|+|+|.+.++|.+|+++|+||
T Consensus         1 IHTgek---------py~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEK---------PYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCC---------CEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCC---------CeeCCCCCCEeCchHHhHhhccccCCC
Confidence            577755         577788888888888888888888886

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=7.5e-11  Score=70.73  Aligned_cols=28  Identities=32%  Similarity=0.719  Sum_probs=26.4

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      ||||+|.+|+|+|.++++|.+|+|+|||
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=2e-10  Score=73.19  Aligned_cols=35  Identities=29%  Similarity=0.548  Sum_probs=22.1

Q ss_pred             hhhccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCC
Q 040647           33 HRKKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        33 H~r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      |.|+|||||         ||+|++|+|+|.++++|.+|+++|..
T Consensus         2 h~R~HTgeK---------Py~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIK---------PFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSS---------SBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCcc---------CeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            566666655         35555666666666666666666653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.9e-10  Score=72.91  Aligned_cols=34  Identities=29%  Similarity=0.611  Sum_probs=26.5

Q ss_pred             hccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           35 KKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        35 r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      |+|||||         ||+|.+|+|+|.++++|++|+++|+++
T Consensus         1 R~HTgek---------Py~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEK---------PYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCC---------CEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCC---------CEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5777765         567778888888888888888888765

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=1e-10  Score=74.55  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=33.6

Q ss_pred             hhhhhcCCCcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           69 GHMNRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        69 ~H~r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      .|.|+|||||||+|.+|++  +|+++++|++|++ +|..
T Consensus         1 gh~R~HTgeKPy~C~~C~k--~F~~~~~L~~H~r-~H~~   36 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCPDCDR--SFSRSDHLALHRK-RHML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCC--CBSSHHHHHHHHG-GGTC
T ss_pred             CCCCccCCccCeEeCCCCC--EecCHHHHHHHHh-cCcC
Confidence            4889999999999999999  9999999999999 8864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=2.3e-10  Score=76.73  Aligned_cols=42  Identities=26%  Similarity=0.529  Sum_probs=33.9

Q ss_pred             CchhhhhhhccCCCCccCCCCCCcccccCc--CCcccCCchhhhhhhhhcCCCc
Q 040647           27 TGAGAGHRKKKSGAKDGKDDECGKVYECRF--CSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        27 ~s~L~~H~r~HtGeKpf~C~~~eKPy~C~~--Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +..|..|++ |+|||         ||+|.+  |+|+|.++++|++|+++|+|||
T Consensus         4 ~~~l~~h~~-h~gek---------py~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDK---------TFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTT---------EEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCC---------CeECCcCCCCccccCchHHHhhcccccCCC
Confidence            346677774 98876         466665  9999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=2.6e-10  Score=72.29  Aligned_cols=32  Identities=25%  Similarity=0.435  Sum_probs=29.5

Q ss_pred             cccCc--CCcccCCchhhhhhhhhcCCCcccccC
Q 040647           52 YECRF--CSLKFCKSQALGGHMNRHRQERETETL   83 (286)
Q Consensus        52 y~C~~--Cgk~F~~ss~L~~H~r~HtgeKPy~C~   83 (286)
                      |+|++  |+|+|.++++|++|+++|++||||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67776  999999999999999999999999996

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.8e-10  Score=71.61  Aligned_cols=33  Identities=18%  Similarity=0.234  Sum_probs=31.6

Q ss_pred             hcCCCcccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           73 RHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        73 ~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      +||+||||+|.+|++  +|.+.++|++|++ +|++|
T Consensus         1 IHTgekpy~C~~Cgk--~F~~~~~L~~H~r-~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGK--AFSRSSILVQHQR-VHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCC--EESSHHHHHHHHH-GGGCS
T ss_pred             CcCCCCCeeCCCCCC--EeCchHHhHhhcc-ccCCC
Confidence            699999999999999  9999999999999 99986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=7.6e-10  Score=69.62  Aligned_cols=30  Identities=20%  Similarity=0.482  Sum_probs=23.2

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      ||||+|++|+|.|.++++|++|+++|+.+.
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCcC
Confidence            346777888888888888888888887653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=4.7e-10  Score=71.02  Aligned_cols=34  Identities=12%  Similarity=0.082  Sum_probs=31.6

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      |+|||||||+|.+|++  +|.+.++|++|++ +|..+
T Consensus         1 R~HTgekPy~C~~C~k--~F~~~~~L~~H~r-~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDK--TFRQKQLLDMHFK-RYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSC--EESSHHHHHHHHH-HTTCS
T ss_pred             CCCCCCCCEECCCCCC--CcCCHhHHHHhCc-ccCCC
Confidence            6899999999999999  9999999999999 78754

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.4e-09  Score=66.56  Aligned_cols=29  Identities=28%  Similarity=0.724  Sum_probs=26.1

Q ss_pred             cccccC--cCCcccCCchhhhhhhhhcCCCc
Q 040647           50 KVYECR--FCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        50 KPy~C~--~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |||.|+  .|+|+|.++++|++|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578886  49999999999999999999997

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.3e-09  Score=66.15  Aligned_cols=28  Identities=29%  Similarity=0.647  Sum_probs=26.4

Q ss_pred             cccccCc--CCcccCCchhhhhhhhhcCCC
Q 040647           50 KVYECRF--CSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      |||+|++  |+|+|.++++|++|+|+||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6889988  999999999999999999997

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=7.8e-10  Score=64.93  Aligned_cols=26  Identities=31%  Similarity=0.565  Sum_probs=24.5

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |||+|.+|||+|.++++|.+|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            78999999999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.3e-09  Score=66.28  Aligned_cols=28  Identities=29%  Similarity=0.673  Sum_probs=26.3

Q ss_pred             cccccCc--CCcccCCchhhhhhhhhcCCC
Q 040647           50 KVYECRF--CSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      |||+|++  |+|+|.++++|++|+|+||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899987  999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=8.4e-10  Score=69.83  Aligned_cols=33  Identities=33%  Similarity=0.729  Sum_probs=21.3

Q ss_pred             hccCCCCccCCCCCCcccccCcCCcccCCchhhhhhhh-hcCC
Q 040647           35 KKKSGAKDGKDDECGKVYECRFCSLKFCKSQALGGHMN-RHRQ   76 (286)
Q Consensus        35 r~HtGeKpf~C~~~eKPy~C~~Cgk~F~~ss~L~~H~r-~Htg   76 (286)
                      |+|||||         ||+|++|+|+|.++++|++|++ .|++
T Consensus         1 R~HTgek---------P~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEK---------PYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCC---------SEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCC---------CEeCCCCcccccchHHHHHHcccccCC
Confidence            4677655         4666677777777777777754 4443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=1.9e-09  Score=67.71  Aligned_cols=32  Identities=16%  Similarity=-0.009  Sum_probs=30.3

Q ss_pred             cCCCcccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           74 HRQERETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        74 HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      |+|||||+|.+|++  .|+++++|++|++ +|+.+
T Consensus         2 ~TGekPy~C~~C~k--~F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLS--AFTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCC--EESSHHHHHHHHG-GGTSC
T ss_pred             CCCCccccCCCCCC--cccChHHHHHHcc-ccCCc
Confidence            79999999999999  9999999999999 89865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=3.9e-09  Score=66.70  Aligned_cols=34  Identities=15%  Similarity=0.140  Sum_probs=30.4

Q ss_pred             hhcCCCcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           72 NRHRQERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        72 r~HtgeKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      |+|||||||+|..|++  .|+++++|++|++..|+.
T Consensus         1 R~HTgekP~~C~~C~k--~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHA--RFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCC--EESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcc--cccchHHHHHHcccccCC
Confidence            6899999999999999  999999999997635654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=3.5e-09  Score=68.06  Aligned_cols=36  Identities=14%  Similarity=0.044  Sum_probs=33.3

Q ss_pred             CCcccccCCCCcccccCCchhhhhcCCCCCCCCCCCCC
Q 040647           76 QERETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMTP  113 (286)
Q Consensus        76 geKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~~  113 (286)
                      -+|||+|..|++  .|++.++|++|++.+|+++|||.|
T Consensus         2 ~~Kpy~C~~Cgk--~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQSCGK--GFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSSSCC--EESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCCCCC--CcCChHHhhccCcCccCCCcCcCC
Confidence            489999999999  999999999997548999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.59  E-value=1.7e-09  Score=72.29  Aligned_cols=41  Identities=15%  Similarity=0.189  Sum_probs=37.1

Q ss_pred             hhhhhhhhhcCCCcccccCC--CCcccccCCchhhhhcCCCCCCCCC
Q 040647           65 QALGGHMNRHRQERETETLN--KARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        65 s~L~~H~r~HtgeKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      ..|.+|++ |++||||+|.+  |++  +|.+.++|++|++ +|+++|
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k--~F~~~~~L~~H~r-~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTK--TFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCC--EECSSSSHHHHHH-HHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCc--cccCchHHHhhcc-cccCCC
Confidence            46778885 99999999987  999  9999999999999 999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=2.6e-08  Score=61.15  Aligned_cols=29  Identities=24%  Similarity=0.635  Sum_probs=25.8

Q ss_pred             CcccccCc--CCcccCCchhhhhhhhhcCCC
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ||||.|++  |+|+|.+.++|++|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888887  999999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=8.5e-09  Score=65.10  Aligned_cols=29  Identities=14%  Similarity=-0.076  Sum_probs=27.4

Q ss_pred             hhcccccCCCchhhhhhhccCCCCccCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGAKDGKDD   46 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGeKpf~C~   46 (286)
                      +.|++.|.++.+|++|+++|+|||||+|+
T Consensus         7 ~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           7 PACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            57999999999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=1.5e-08  Score=60.96  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=24.8

Q ss_pred             cccccCc--CCcccCCchhhhhhhhhcCC
Q 040647           50 KVYECRF--CSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      |||+|++  |+|+|.++++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6888887  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=3.7e-08  Score=58.67  Aligned_cols=26  Identities=38%  Similarity=0.805  Sum_probs=23.9

Q ss_pred             cccccCc--CCcccCCchhhhhhhhhcC
Q 040647           50 KVYECRF--CSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |||+|++  |+|+|.+.++|++|+|+||
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6788887  9999999999999999996

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.40  E-value=2.6e-08  Score=59.86  Aligned_cols=29  Identities=17%  Similarity=0.127  Sum_probs=27.8

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||+|.+|++  +|++.++|++|++ +|++||
T Consensus         1 kp~~C~~C~k--~F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTR--AFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTTTCC--CBSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCCCCC--CCCCchHcccccC-cccCCC
Confidence            7999999999  9999999999999 999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=1.4e-08  Score=60.58  Aligned_cols=28  Identities=21%  Similarity=0.279  Sum_probs=26.5

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||||+|.+|++  +|+++++|++|++ +|+|
T Consensus         1 EKPy~C~~C~k--~F~~~~~L~~H~r-~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMR--NFSRSDHLTTHIR-THTG   28 (28)
T ss_dssp             CCCEECTTTCC--EESCHHHHHHHHH-HHHC
T ss_pred             CcCccCCCCcC--EecccccccccCC-CccC
Confidence            79999999999  9999999999999 8875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=3.8e-08  Score=59.12  Aligned_cols=29  Identities=14%  Similarity=0.158  Sum_probs=27.7

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||.|.+|++  +|+++++|.+|++ +|+++|
T Consensus         1 Kpy~C~~C~k--~F~~~s~L~~H~r-~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPK--RFMRSDHLSKHIK-THQNKK   29 (29)
T ss_dssp             CCSCCTTTTC--CCSCSHHHHHHHH-GGGCCC
T ss_pred             CCEECCcCCC--eecchHHhhhhcC-ccCCcC
Confidence            7999999999  9999999999999 999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.2e-07  Score=53.69  Aligned_cols=26  Identities=27%  Similarity=0.534  Sum_probs=24.3

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      |++|++|+|.|+++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=2.4e-07  Score=53.92  Aligned_cols=27  Identities=30%  Similarity=0.586  Sum_probs=23.9

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      ||||.|++|+|.|.++...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578999999999999999999999885

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.1e-07  Score=55.51  Aligned_cols=26  Identities=19%  Similarity=0.282  Sum_probs=24.2

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      |||+|.+|||  +|+++++|.+|++ +|+
T Consensus         1 KPy~C~eCgK--~F~~~s~L~~Hqr-iHT   26 (26)
T d1x6ea2           1 KPYKCLECGK--AFSQNSGLINHQR-IHT   26 (26)
T ss_dssp             CCEECSSSCC--EESSHHHHHHHHH-HHH
T ss_pred             CCccCCCCcC--eeccCcccccCcc-CCC
Confidence            7999999999  9999999999998 764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.1e-06  Score=53.06  Aligned_cols=32  Identities=25%  Similarity=0.383  Sum_probs=28.5

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcccc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERETE   81 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKPy~   81 (286)
                      |...|+.|||.|.....|.+|...|++||||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45679999999999999999999999999983

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.7e-06  Score=49.74  Aligned_cols=27  Identities=33%  Similarity=0.448  Sum_probs=24.6

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      -+.|.+|||+|..++.|++|+.+||||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.6e-06  Score=52.58  Aligned_cols=29  Identities=21%  Similarity=0.224  Sum_probs=26.7

Q ss_pred             cccccC--CCCcccccCCchhhhhcCCCCCCCCC
Q 040647           78 RETETL--NKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        78 KPy~C~--~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |||.|.  .|++  +|++.++|++|++ +|+++|
T Consensus         1 kpf~C~~~~C~k--~F~~~~~L~~H~r-~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGK--RFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCC--BCSSHHHHHHHHT-TTSCCC
T ss_pred             CcCCCcCCCCCc--CcCChhHhhhhcC-cccccC
Confidence            699996  6999  9999999999999 999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=7.2e-07  Score=53.76  Aligned_cols=28  Identities=14%  Similarity=0.170  Sum_probs=26.3

Q ss_pred             cccccCC--CCcccccCCchhhhhcCCCCCCCC
Q 040647           78 RETETLN--KARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        78 KPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      |||+|.+  |++  +|.+.++|++|++ +|+||
T Consensus         1 kp~~C~~~gCgk--~F~~~~~L~~H~r-~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRK--SYSRLENLKTHLR-SHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCC--CCSSHHHHHHHHH-HTTTC
T ss_pred             CCeeCCCCCCCc--eECChhHhhhhcC-cCcCC
Confidence            7999988  999  9999999999999 99986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=7.6e-07  Score=53.66  Aligned_cols=28  Identities=18%  Similarity=0.096  Sum_probs=25.9

Q ss_pred             cccccCC--CCcccccCCchhhhhcCCCCCCCC
Q 040647           78 RETETLN--KARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        78 KPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      |||+|.+  |++  +|++.++|++|++ +|++|
T Consensus         1 kp~~C~~~gCgk--~F~~~~~L~~H~r-~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGK--RFSLDFNLRTHVR-IHTGD   30 (30)
T ss_dssp             CCEECCSTTCCC--EESCHHHHHHHHH-HHHCC
T ss_pred             CCccCCCCCCCc--eECcHHHcCcccc-ccCCC
Confidence            7999987  999  9999999999999 89875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.79  E-value=3.8e-06  Score=52.64  Aligned_cols=30  Identities=53%  Similarity=1.091  Sum_probs=27.7

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcCCCcc
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHRQERE   79 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~HtgeKP   79 (286)
                      |.|+|.+|+|.|.+.++|..||+.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            579999999999999999999999988764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.75  E-value=3.3e-06  Score=51.49  Aligned_cols=29  Identities=17%  Similarity=0.186  Sum_probs=26.3

Q ss_pred             CcccccCC--CCcccccCCchhhhhcCCCCCCCC
Q 040647           77 ERETETLN--KARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        77 eKPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      ||||.|.+  |++  +|++.++|++|++ +|+.+
T Consensus         1 ErP~~C~~pgC~k--~F~r~~~L~~H~r-~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDK--AFVRNHDLIRHKK-SHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCC--CBSSSHHHHHHHG-GGTCC
T ss_pred             CcCeECcCCCCCC--eeCCHHHHHHHhh-hccCC
Confidence            79999988  999  9999999999999 88753

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=9.7e-06  Score=46.80  Aligned_cols=29  Identities=21%  Similarity=0.528  Sum_probs=25.6

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ||||+|..|..+-.+++.|..|.|.|||+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999999999999999999999984

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.4e-05  Score=46.28  Aligned_cols=27  Identities=30%  Similarity=0.598  Sum_probs=25.7

Q ss_pred             cccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           52 YECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      |.|+.|++.....+.|++|+|.||+||
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1e-05  Score=47.73  Aligned_cols=29  Identities=28%  Similarity=0.655  Sum_probs=26.3

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      ||||+|++|..+|.++..+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=4.1e-06  Score=49.93  Aligned_cols=27  Identities=22%  Similarity=0.182  Sum_probs=24.5

Q ss_pred             cccccCC--CCcccccCCchhhhhcCCCCCCC
Q 040647           78 RETETLN--KARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        78 KPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      |||+|.+  |++  +|.+.++|++|++ +|+|
T Consensus         1 Kp~~C~~~gC~k--~F~~~~~L~~H~r-~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDR--RFSRSADLTRHIR-IHTG   29 (29)
T ss_dssp             CCEECCSTTCCC--EESSHHHHHHHTH-HHHT
T ss_pred             CCeECCCCCCCc--EECchhHhhhhcC-ccCC
Confidence            7999987  888  9999999999999 8875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=1e-05  Score=46.95  Aligned_cols=27  Identities=22%  Similarity=0.165  Sum_probs=25.3

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      ||||.|..|++  .|.+++..++|.+ +|.
T Consensus         1 EkPf~C~~Cgr--kFArsderkRH~k-iH~   27 (28)
T d1a1ia3           1 EKPFACDICGR--KFARSDERKRHTK-IHL   27 (28)
T ss_dssp             CCCEECTTTCC--EESSHHHHHHHHG-GGC
T ss_pred             CCCcccchhhh--hhhcchhhhhhhh-hcc
Confidence            79999999999  9999999999999 775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=8.9e-06  Score=48.04  Aligned_cols=26  Identities=19%  Similarity=0.092  Sum_probs=23.4

Q ss_pred             cccccCC--CCcccccCCchhhhhcCCCCCC
Q 040647           78 RETETLN--KARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        78 KPy~C~~--Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      |||.|..  |+|  +|++.++|++|++ +|+
T Consensus         1 rPf~C~~~gC~K--~F~~~~~L~~H~r-~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNK--KFAQSTNLKSHIL-THA   28 (28)
T ss_dssp             CCCCCCSTTCCC--CCSSTTTTHHHHH-HHC
T ss_pred             CCcCCCCCCcCC--cCCCHHHHHHHHh-hcc
Confidence            7999987  888  9999999999998 664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=5.5e-05  Score=42.79  Aligned_cols=26  Identities=35%  Similarity=0.561  Sum_probs=23.1

Q ss_pred             ccCcCCcccCCchhhhhhhhhcCCCc
Q 040647           53 ECRFCSLKFCKSQALGGHMNRHRQER   78 (286)
Q Consensus        53 ~C~~Cgk~F~~ss~L~~H~r~HtgeK   78 (286)
                      +|+.|.|.|..+.-|+.|-|.|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58889999999999999999999886

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=5.8e-05  Score=44.64  Aligned_cols=28  Identities=32%  Similarity=0.613  Sum_probs=24.2

Q ss_pred             cccccCc--CCcccCCchhhhhhh-hhcCCC
Q 040647           50 KVYECRF--CSLKFCKSQALGGHM-NRHRQE   77 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~-r~Htge   77 (286)
                      |||.|.+  |.|+|++.++..+|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5788887  999999999999997 888754

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00014  Score=40.48  Aligned_cols=24  Identities=33%  Similarity=0.797  Sum_probs=21.3

Q ss_pred             cccCcCCcccCCchhhhhhhhhcC
Q 040647           52 YECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |+|..|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678899999999999999999885

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00012  Score=41.76  Aligned_cols=26  Identities=31%  Similarity=0.667  Sum_probs=24.3

Q ss_pred             cccccCcCCcccCCchhhhhhhhhcC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |||+|..|..+-..+++|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00012  Score=41.18  Aligned_cols=26  Identities=19%  Similarity=0.232  Sum_probs=23.7

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      |.+|..|++  .|++++.|+.|+| .|++
T Consensus         1 phkc~~c~k--cfsrkdklk~hmr-~htg   26 (26)
T d2dmda2           1 PHKCEVCGK--CFSRKDKLKTHMR-CHTG   26 (26)
T ss_dssp             CCCBTTTTB--CCCCHHHHHHHGG-GCCC
T ss_pred             CCccchhhh--HhcchhHHHHHhh-ccCC
Confidence            578999999  9999999999999 7764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00019  Score=41.98  Aligned_cols=25  Identities=24%  Similarity=0.693  Sum_probs=16.3

Q ss_pred             cccccCc--CCcccCCchhhhhhhhhc
Q 040647           50 KVYECRF--CSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~r~H   74 (286)
                      |||.|.+  |+|+++..++|++|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            4566655  677777777777776654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.00025  Score=41.05  Aligned_cols=28  Identities=29%  Similarity=0.494  Sum_probs=23.1

Q ss_pred             cccccCc--CCcccCCchhhhhhhhhcCCC
Q 040647           50 KVYECRF--CSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        50 KPy~C~~--Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      |||.|.+  |.|.|.....|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3555654  999999999999999999886

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.54  E-value=0.00048  Score=39.71  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=25.6

Q ss_pred             CcccccCcCCcccCCchhhhhhhhhcCCC
Q 040647           49 GKVYECRFCSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        49 eKPy~C~~Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      |..|.|..|...|.++-.|+.||..|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00037  Score=39.98  Aligned_cols=28  Identities=21%  Similarity=0.184  Sum_probs=25.5

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||||+|+.|.-  .-+.++.|..|.| .|++
T Consensus         1 erpfkcqlcsy--~srnssqltvhlr-~htg   28 (29)
T d2dmda3           1 ERPFKCQICPY--ASRNSSQLTVHLR-SHTG   28 (29)
T ss_dssp             CCCEECSSSSC--EESSHHHHHHHHT-TCCS
T ss_pred             CCcceeeeccc--ccCCchheEEeee-cccC
Confidence            68999999998  8888999999999 8876

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00016  Score=42.25  Aligned_cols=28  Identities=7%  Similarity=-0.049  Sum_probs=22.8

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      |||.|+..++.+++++.++|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6999998555559999999999998434

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.46  E-value=0.0004  Score=39.95  Aligned_cols=24  Identities=33%  Similarity=0.672  Sum_probs=20.9

Q ss_pred             ccccCc--CCcccCCchhhhhhhhhc
Q 040647           51 VYECRF--CSLKFCKSQALGGHMNRH   74 (286)
Q Consensus        51 Py~C~~--Cgk~F~~ss~L~~H~r~H   74 (286)
                      ||+|..  |+|+|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            677765  999999999999999887

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.00052  Score=41.09  Aligned_cols=32  Identities=16%  Similarity=0.250  Sum_probs=29.2

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGCHPMT  112 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~kP~~  112 (286)
                      |...|..||+  .|+..-+|.+|.- .|.+||||.
T Consensus         4 k~~~ce~cgk--~frdvyhlnrhkl-shs~ekpys   35 (35)
T d2epra1           4 KQVACEICGK--IFRDVYHLNRHKL-SHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTE--EESSHHHHHHHGG-GSCSCCCCC
T ss_pred             hhhhHHHHHH--HHHHHHHHHhhhc-ccCCCCCCC
Confidence            5678999999  9999999999988 899999984

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00057  Score=43.08  Aligned_cols=23  Identities=30%  Similarity=0.738  Sum_probs=20.4

Q ss_pred             cccccCcCCcccCCchhhhhhhh
Q 040647           50 KVYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      |||+|..|+|.|-++.++.+|.-
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhh
Confidence            68999999999999999999854

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.0013  Score=37.99  Aligned_cols=28  Identities=32%  Similarity=0.825  Sum_probs=21.5

Q ss_pred             cccccCcCCcccCCchhhhhhhhh-cCCC
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNR-HRQE   77 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~-Htge   77 (286)
                      |||+|..|..+-..+++|+.|+++ |..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            578888888888888888888765 4444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.00078  Score=42.43  Aligned_cols=26  Identities=15%  Similarity=0.032  Sum_probs=23.8

Q ss_pred             CCCcccccCCCCcccccCCchhhhhcCC
Q 040647           75 RQERETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        75 tgeKPy~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      ||-|||+|..|+|  .|.+.+++.+|..
T Consensus         1 TGiKPYeC~~C~K--rFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAK--RFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCC--EESCHHHHHHHHH
T ss_pred             CCCCceeccchhh--hhhhHHHHHHhhh
Confidence            5789999999999  9999999999964

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.18  E-value=0.00086  Score=39.48  Aligned_cols=20  Identities=30%  Similarity=0.683  Sum_probs=10.7

Q ss_pred             ccccCcCCcccCCchhhhhh
Q 040647           51 VYECRFCSLKFCKSQALGGH   70 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H   70 (286)
                      ||.|.+|+|.|.++.-|-+|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH   20 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRH   20 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHH
Confidence            35555555555555555555

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.15  E-value=0.00056  Score=38.52  Aligned_cols=25  Identities=20%  Similarity=0.089  Sum_probs=22.9

Q ss_pred             hhhcccccCCCchhhhhhhccCCCC
Q 040647           17 SKQVLDESSSTGAGAGHRKKKSGAK   41 (286)
Q Consensus        17 ~~~C~k~F~~~s~L~~H~r~HtGeK   41 (286)
                      |..|.|.|.++.-|+.|.|.|||||
T Consensus         3 cp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             CcchHHHHHHhHhhhhccccccCCC
Confidence            3579999999999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.00072  Score=38.55  Aligned_cols=27  Identities=15%  Similarity=0.122  Sum_probs=24.4

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      ...|.+||+  .|..++.|++|+- +|+++
T Consensus         2 ~hvc~ecgk--af~essklkrh~l-vhtge   28 (28)
T d1ubdc2           2 VHVCAECGK--AFVESSKLKRHQL-VHTGE   28 (28)
T ss_dssp             CEECTTTCC--EESSHHHHHHHGG-GTSCC
T ss_pred             cchHHHHhH--HHHHHHHHHHHhh-cccCC
Confidence            457999999  9999999999999 89875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.90  E-value=0.0011  Score=38.95  Aligned_cols=27  Identities=22%  Similarity=0.132  Sum_probs=24.9

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||.|..|++  .|.+++-|.+|+.+.|.+
T Consensus         1 Pf~C~~C~R--~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNR--AFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCC--EESSHHHHHHHHTTTSCC
T ss_pred             Ccccccccc--hhhHHHHHHHHHHHHhcC
Confidence            799999999  999999999998878875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.00054  Score=40.14  Aligned_cols=28  Identities=18%  Similarity=0.196  Sum_probs=24.6

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLG  107 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g  107 (286)
                      ||||+|.+|..  +|.+++.+.-|.+ .|.+
T Consensus         1 ekp~~cpic~q--rfkrkdrmsyhvr-shdg   28 (32)
T d2epqa1           1 EKPYSCPVCGL--RFKRKDRMSYHVR-SHDG   28 (32)
T ss_dssp             CCSSEETTTTE--ECSCHHHHHHHHH-HHSC
T ss_pred             CCCcccchHHH--HhhccccceEeee-cccC
Confidence            79999999999  9999999998888 5544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0027  Score=38.26  Aligned_cols=20  Identities=35%  Similarity=0.298  Sum_probs=16.1

Q ss_pred             CcccCCchhhhhhhhhcCCC
Q 040647           58 SLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        58 gk~F~~ss~L~~H~r~Htge   77 (286)
                      ++.|.....|..|||+||||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            35588888888888888886

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0031  Score=38.97  Aligned_cols=27  Identities=26%  Similarity=0.612  Sum_probs=22.3

Q ss_pred             CcccccCc--CCcccCCchhhhhhhhhcC
Q 040647           49 GKVYECRF--CSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        49 eKPy~C~~--Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      +|||.|..  |+.+|.+...|..|+..|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            56777744  9999999999999988775

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.0018  Score=37.47  Aligned_cols=29  Identities=10%  Similarity=-0.083  Sum_probs=24.5

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPHLGC  108 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~  108 (286)
                      |||+|+.|.-  .-...++|+.|.++-|..+
T Consensus         1 kpy~cqyc~y--rsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEF--RSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSC--CCSCSHHHHHHHHHHTSSC
T ss_pred             CCcccccccc--ccccchhhhhhhhcccccC
Confidence            6999999998  8888999999988556554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.0064  Score=34.86  Aligned_cols=23  Identities=30%  Similarity=0.769  Sum_probs=18.2

Q ss_pred             ccccCcCCcccCCchhhhhhhhh
Q 040647           51 VYECRFCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~   73 (286)
                      ||.|..|+-+|..+.+|.+||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57788888888888888888764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0033  Score=36.01  Aligned_cols=27  Identities=7%  Similarity=-0.161  Sum_probs=24.6

Q ss_pred             cccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           80 TETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        80 y~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      |.|..|+.  .....+.|++|+| .|++++
T Consensus         2 YvC~~Cg~--~C~KPSvL~KHIR-sHT~~R   28 (28)
T d1bboa1           2 YICEECGI--RAKKPSMLKKHIR-THTDVR   28 (28)
T ss_dssp             CBCTTTCC--BCSSHHHHHHHHH-HTSSCC
T ss_pred             ccccccCc--ccCCHHHHHHHHH-HhcCCC
Confidence            78999999  9999999999999 898874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=94.26  E-value=0.0062  Score=33.64  Aligned_cols=24  Identities=17%  Similarity=0.054  Sum_probs=21.9

Q ss_pred             cccCCCCcccccCCchhhhhcCCCCCC
Q 040647           80 TETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        80 y~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      |+|-.|.+  +|..++.|.+|++ +|.
T Consensus         1 ykcglcer--sfveksalsrhqr-vhk   24 (26)
T d1znfa_           1 YKCGLCER--SFVEKSALSRHQR-VHK   24 (26)
T ss_dssp             CBCSSSCC--BCSSHHHHHHHGG-GTC
T ss_pred             CcccchHH--HHHHHHHHHHHHH-hhc
Confidence            68999999  9999999999999 774

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.19  E-value=0.0032  Score=35.70  Aligned_cols=27  Identities=7%  Similarity=-0.095  Sum_probs=24.0

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      .|||+|..|.-  .-...++|++|+| +|.
T Consensus         1 vkp~kck~cdy--aaadsssl~kh~r-ihs   27 (28)
T d2dmda1           1 VKPYKCKTCDY--AAADSSSLNKHLR-IHS   27 (28)
T ss_dssp             CCSEECSSSCC--EESSHHHHHHHHH-HSC
T ss_pred             CCCcccccccc--hhcchhhHhhhhh-ccc
Confidence            37999999999  8889999999999 774

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.005  Score=37.08  Aligned_cols=24  Identities=8%  Similarity=-0.050  Sum_probs=20.0

Q ss_pred             hhhccc---ccCCCchhhhhhhccCCC
Q 040647           17 SKQVLD---ESSSTGAGAGHRKKKSGA   40 (286)
Q Consensus        17 ~~~C~k---~F~~~s~L~~H~r~HtGe   40 (286)
                      |+.|.+   .|..+..|..|+|+||||
T Consensus         7 W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           7 WGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             BTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            466764   488889999999999997

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.011  Score=33.96  Aligned_cols=24  Identities=25%  Similarity=0.753  Sum_probs=19.2

Q ss_pred             cccccCcCCcccCCchhhhhhhhh
Q 040647           50 KVYECRFCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        50 KPy~C~~Cgk~F~~ss~L~~H~r~   73 (286)
                      +||+|++|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            578888888888888888888763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.23  E-value=0.0068  Score=34.74  Aligned_cols=23  Identities=9%  Similarity=-0.074  Sum_probs=21.8

Q ss_pred             hhcccccCCCchhhhhhhccCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGA   40 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGe   40 (286)
                      ..|.+.|.++..|+.||-.||||
T Consensus         8 s~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           8 SVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             SSSCCEESSHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHhheeeeecccCC
Confidence            78999999999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.37  E-value=0.015  Score=33.99  Aligned_cols=27  Identities=11%  Similarity=0.129  Sum_probs=22.5

Q ss_pred             cccccCC--CCcccccCCchhhhhcC-CCCCCC
Q 040647           78 RETETLN--KARQLVFQHNDNLAVQG-PPPHLG  107 (286)
Q Consensus        78 KPy~C~~--Cgr~~sFs~~s~L~~H~-r~~H~g  107 (286)
                      |||.|+.  |.|  .|+..+...+|+ | +|..
T Consensus         1 kPY~C~~~gC~K--afsNsSDraKHqnR-THs~   30 (31)
T d2glia4           1 KPYMCEHEGCSK--AFSNASDRAKHQNR-THSN   30 (31)
T ss_dssp             CCEECCSTTCCC--EESSSSTTHHHHHH-TTCS
T ss_pred             CCccccCCChhh--hhcchhhhhhhccc-cccC
Confidence            6999987  666  999999999997 6 7754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.22  E-value=0.028  Score=31.77  Aligned_cols=25  Identities=28%  Similarity=0.319  Sum_probs=21.6

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |-+|..|..+..++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578889999999999999999984

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.16  E-value=0.025  Score=31.11  Aligned_cols=22  Identities=36%  Similarity=0.744  Sum_probs=17.9

Q ss_pred             ccccCcCCcccCCchhhhhhhh
Q 040647           51 VYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      ||+|..|...|-++..|+.||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6788888888888888888864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.74  E-value=0.0059  Score=35.07  Aligned_cols=26  Identities=15%  Similarity=-0.042  Sum_probs=22.3

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      |||+|..|.-  .-.+.++|.+|+++.|
T Consensus         1 rPFkC~~CsF--Dtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSF--DTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSC--EESSHHHHHHHHHHHH
T ss_pred             CCcccceecc--cccCcchHHHHHHHHc
Confidence            6899999988  7889999999987544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.70  E-value=0.023  Score=31.90  Aligned_cols=24  Identities=38%  Similarity=0.683  Sum_probs=19.5

Q ss_pred             cccCc--CCcccCCchhhhhhhhhcC
Q 040647           52 YECRF--CSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        52 y~C~~--Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      |.|.+  |+|+|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45554  9999999999999988876

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.36  E-value=0.042  Score=30.85  Aligned_cols=22  Identities=23%  Similarity=0.489  Sum_probs=17.1

Q ss_pred             ccccCcCCcccCCchhhhhhhh
Q 040647           51 VYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      ||+|..|||.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5778888888888888887753

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.76  E-value=0.013  Score=33.40  Aligned_cols=27  Identities=15%  Similarity=0.058  Sum_probs=21.1

Q ss_pred             cccccCCCCcccccCCchhhhhcCCCCC
Q 040647           78 RETETLNKARQLVFQHNDNLAVQGPPPH  105 (286)
Q Consensus        78 KPy~C~~Cgr~~sFs~~s~L~~H~r~~H  105 (286)
                      .||+|..=|++++|...+.|++|.+ +|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhek-vh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEK-VH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHH-HH
T ss_pred             CCccCCccCccccccCHHHHhhhhh-cc
Confidence            5899975444449999999999987 54

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.16  E-value=0.029  Score=32.12  Aligned_cols=23  Identities=13%  Similarity=0.034  Sum_probs=21.7

Q ss_pred             hhcccccCCCchhhhhhhccCCC
Q 040647           18 KQVLDESSSTGAGAGHRKKKSGA   40 (286)
Q Consensus        18 ~~C~k~F~~~s~L~~H~r~HtGe   40 (286)
                      +.|.|.|.+.-+|.+|..+||||
T Consensus         8 egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           8 EGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SSCCCEESSTTHHHHHHHHHHTC
T ss_pred             ccccccchhhhhhhhhhccccCC
Confidence            78999999999999999999986

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.04  E-value=0.037  Score=33.99  Aligned_cols=30  Identities=17%  Similarity=0.017  Sum_probs=26.0

Q ss_pred             CcccccCCCCcccccCCchhhhhcCCCCCCCCC
Q 040647           77 ERETETLNKARQLVFQHNDNLAVQGPPPHLGCH  109 (286)
Q Consensus        77 eKPy~C~~Cgr~~sFs~~s~L~~H~r~~H~g~k  109 (286)
                      .|.|+|..|++  .|.....|-.|++ .|..++
T Consensus         3 ~r~~~C~~C~k--~F~s~qALGGH~~-~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKR--EFRSAQALGGHMN-VHRRDR   32 (37)
T ss_dssp             SSSEECTTTCC--EESSHHHHHHHHH-TTCCSC
T ss_pred             CCccCCCCCCC--ccCCcccccchHh-hhcchH
Confidence            36799999999  9999999999998 786554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.24  E-value=0.05  Score=31.01  Aligned_cols=22  Identities=14%  Similarity=0.009  Sum_probs=20.9

Q ss_pred             ccccCCCCcccccCCchhhhhcCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      ||.|..|.-  +|..+.+|++|++
T Consensus         1 py~C~~CnF--~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNF--SFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSC--EESSHHHHHHHHH
T ss_pred             Ccccceeee--eEeeccchhHhhh
Confidence            789999999  9999999999987

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.02  E-value=0.092  Score=33.81  Aligned_cols=25  Identities=24%  Similarity=0.582  Sum_probs=20.6

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      -|.|-.|+|.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778889999999988998877664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.52  E-value=0.039  Score=30.29  Aligned_cols=22  Identities=9%  Similarity=0.063  Sum_probs=20.1

Q ss_pred             ccccCCCCcccccCCchhhhhcCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      ||+|..|.+  .|.++..|+.|+-
T Consensus         2 pykcsscsq--qfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQ--QFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCC--EESSHHHHHHHHH
T ss_pred             CCcccHHHH--HHHHHHHHHHHHH
Confidence            799999999  9999999999875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.52  E-value=0.11  Score=30.89  Aligned_cols=26  Identities=15%  Similarity=0.497  Sum_probs=21.2

Q ss_pred             ccccCcCCcccCCchhhhhhhhhcCC
Q 040647           51 VYECRFCSLKFCKSQALGGHMNRHRQ   76 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r~Htg   76 (286)
                      .|.|..|+|.|.++..+.+|-...+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47899999999999999988765554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.29  E-value=0.1  Score=28.65  Aligned_cols=22  Identities=27%  Similarity=0.770  Sum_probs=17.8

Q ss_pred             cccCcCCcccCCchhhhhhhhh
Q 040647           52 YECRFCSLKFCKSQALGGHMNR   73 (286)
Q Consensus        52 y~C~~Cgk~F~~ss~L~~H~r~   73 (286)
                      |.|++|=|.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.09  E-value=0.12  Score=29.09  Aligned_cols=20  Identities=25%  Similarity=0.477  Sum_probs=17.0

Q ss_pred             cCCcccCCchhhhhhhhhcC
Q 040647           56 FCSLKFCKSQALGGHMNRHR   75 (286)
Q Consensus        56 ~Cgk~F~~ss~L~~H~r~Ht   75 (286)
                      -|.|.|...+++++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            38999999999999988873

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.23  E-value=0.11  Score=30.11  Aligned_cols=27  Identities=33%  Similarity=0.744  Sum_probs=19.0

Q ss_pred             ccccCc--CCcccCCchhhhhhhhhcCCC
Q 040647           51 VYECRF--CSLKFCKSQALGGHMNRHRQE   77 (286)
Q Consensus        51 Py~C~~--Cgk~F~~ss~L~~H~r~Htge   77 (286)
                      .|.|.+  |+..|...-.|..|.-.||||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455655  777777777777777777765

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.56  E-value=0.18  Score=28.20  Aligned_cols=22  Identities=14%  Similarity=0.173  Sum_probs=19.4

Q ss_pred             ccccCCCCcccccCCchhhhhcCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      ||+|..||+  .+-++.+|..|..
T Consensus         1 pf~c~kcgk--cyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGK--CYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCC--BCSSHHHHHHHHH
T ss_pred             CCccccchh--hhhhHhHHHHHHH
Confidence            689999999  8888999998864

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.86  E-value=0.2  Score=28.09  Aligned_cols=22  Identities=23%  Similarity=0.665  Sum_probs=16.9

Q ss_pred             ccccCcCCcccCCchhhhhhhh
Q 040647           51 VYECRFCSLKFCKSQALGGHMN   72 (286)
Q Consensus        51 Py~C~~Cgk~F~~ss~L~~H~r   72 (286)
                      .|.|+.|+..-.++++|+.|++
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            3678888888888888888865

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.25  E-value=0.087  Score=29.60  Aligned_cols=26  Identities=15%  Similarity=0.126  Sum_probs=22.1

Q ss_pred             ccccCCCCcccccCCchhhhhcCCCCCC
Q 040647           79 ETETLNKARQLVFQHNDNLAVQGPPPHL  106 (286)
Q Consensus        79 Py~C~~Cgr~~sFs~~s~L~~H~r~~H~  106 (286)
                      .|+|..|+.  ...+++.|+.|++..|+
T Consensus         2 k~qcphc~t--iiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDT--VIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSC--EESSHHHHHHHHHHTSC
T ss_pred             CccCCcchh--heeehhhhhHHhhhccc
Confidence            479999999  99999999999885553

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.95  E-value=0.3  Score=29.76  Aligned_cols=25  Identities=20%  Similarity=0.260  Sum_probs=21.7

Q ss_pred             CCccccc--CCCCcccccCCchhhhhcCC
Q 040647           76 QERETET--LNKARQLVFQHNDNLAVQGP  102 (286)
Q Consensus        76 geKPy~C--~~Cgr~~sFs~~s~L~~H~r  102 (286)
                      .+|||.|  .-|+.  +|...++|..|.+
T Consensus         3 ddkPF~C~~pGC~q--~F~neDhL~vHk~   29 (38)
T d1bhia_           3 DDKPFLCTAPGCGQ--RFTNEDHLAVHKH   29 (38)
T ss_dssp             TCCCEECCCTTTCC--EESSHHHHHHHHH
T ss_pred             CCCceecCCCCccc--cccchHHHHHhhh
Confidence            5899999  46777  9999999999976