Citrus Sinensis ID: 040648

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54

MAVAIDQHHGFKPFSRSQRCRLQSFTQLDYSILGLTQTNLAHSLKQPLTVEDEFDTSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESMMNMSDDDGESNDRSEETEEEFEMFKFDNESEDDSNEVLDPPQRSQNPTKNMSKPSKFPRLSTVRSLPGLHEAAAMSPLYEENSSEDDETEKQTIKENGSRVDEIKAAADAMTRSMSFSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIERTKSMKLKKRLGSSCEF

cccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccEEEEEEEccccccccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc

cEEEEcccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHcccccEEcccccccEEEEEcccccEEEEEccccccccccccccccccccccccccccccEcccHHHHHHHHHHHcccccccccccEEEEEEccccccccccccccccccEEEHHHEccccccHHHcccccccHHHEEEEEEEEEEEEEcccccccEEEEEccccccEEEEEEcccccccccccccccEEEEEcccccccccHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHccccccccHHHHHHHHHHHHHHHHHHcccccccHcccccccHHccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHcHcHHHcccccccc

mavaidqhhgfkpfsrsqrcrlqsftqlDYSILGLtqtnlahslkqpltvedefdtsqrieivggkgapRVRALVVEVAIALAsgvkpipvssglggayllpgrngdviavakpideeplafnnpkgfgglmlgqpgvkrsvrvGETGIRELAAYLLdhdgfagvpptalvkisdvgfnvndtaanstapykIASLQRFvehefdsgelgsssfsvaSIHRIGIFDVRIlnldrhagnilvkkhdrhgeaaelvpidhglclpewlddpyfewlhwpqasvpfsepeleyicnldpyrdaeilrtelptlreSSIRVLMLCTIFLKQTAAAGLclgdigemmtrefcggeekLSVLETLCAKVKESMMnmsdddgesndrseeTEEEFEMfkfdneseddsnevldppqrsqnptknmskpskfprlstvrslpglheaaamsplyeensseddeteKQTIKENGSRVDEIKAAADAMTRSMSFsvrncnceaeglafgdmdegEWEMFLETFEVLLPEVIERTKSMklkkrlgsscef

mavaidqhhgfkpfsrsqrCRLQSFTQLDYSILGLTQTNLAHSLKQPltvedefdtsqrieivggkgaprVRALVVEVAIALasgvkpipvssGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESmmnmsdddgesndRSEETEEEFEMFKfdneseddsnevldppqrsqnptknmskpskfprLSTVRSLPGLHEAAAMSplyeensseddetekqtikengsrvdEIKAAADAMTRSMSFSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIErtksmklkkrlgsscef

MAVAIDQHHGFKPFSRSQRCRLQSFTQLDYSILGLTQTNLAHSLKQPLTVEDEFDTSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESMMNMSDDDGESNDRSeeteeefeMFKFDNESEDDSNEVLDPPQRSQNPTKNMSKPSKFPRLSTVRSLPGLHEAAAMSPLYEENSSEDDETEKQTIKENGSRVDEIKAAADAMTRSMSFSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIERTKSMKLKKRLGSSCEF

******************RCRLQSFTQLDYSILGLTQTNLAHSLKQPLTVEDEFDTSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAK*************************************************************************************************************************FSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIE*****************

*****************************************************************KGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAA**TAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFC***EKLSVLETLCAKVKESMM**********************F***********************************************************************************************************GDMDEGEWEMFLETFEVLLPEVI***********LGSSC**

**********FKPFSRSQRCRLQSFTQLDYSILGLTQTNLAHSLKQPLTVEDEFDTSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESMMN********************MFKFDN******************************RLSTVRSLPGLHEAAAMSPL********************SRVDEIKAAADAMTRSMSFSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIERTKSMK***********

MAVAIDQHHGFKPFSRSQRCRLQSFTQLDYSILGLT*******************TSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESMMNMSDD**********TEEEFEMFKFD************************************************************************************************CEAEGLAFGDMDEGEWEMFLETFEVLLPEVIERTKSMK*******SC*F

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		539	2.2.26 [Sep-21-2011]
Q9C671		630	Probable phosphatidylinos	no	no	0.914	0.782	0.445	1e-112
Q5XIL2		477	Phosphatidylinositol 4-ki	yes	no	0.380	0.429	0.280	2e-09
Q8CBQ5		469	Phosphatidylinositol 4-ki	yes	no	0.406	0.466	0.270	3e-09
Q49GP5		501	Phosphatidylinositol 4-ki	yes	no	0.400	0.431	0.271	1e-08
Q8TCG2		481	Phosphatidylinositol 4-ki	yes	no	0.398	0.446	0.272	1e-08
Q6DCQ8		495	Phosphatidylinositol 4-ki	N/A	no	0.400	0.436	0.266	2e-08
Q28G26		492	Phosphatidylinositol 4-ki	yes	no	0.378	0.414	0.263	2e-08
Q5ZIK0		479	Phosphatidylinositol 4-ki	yes	no	0.400	0.450	0.266	7e-08
Q9BTU6		479	Phosphatidylinositol 4-ki	no	no	0.398	0.448	0.249	7e-07
Q2TBE6		479	Phosphatidylinositol 4-ki	no	no	0.400	0.450	0.238	1e-06

>sp\|Q9C671\|P4K2B_ARATH Probable phosphatidylinositol 4-kinase type 2-beta At1g26270 OS=Arabidopsis thaliana GN=At1g26270 PE=1 SV=1	Back alignment and function desciption

 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/546 (44%), Positives = 323/546 (59%), Gaps = 53/546 (9%)

Query: 31  SILGLTQTNLAHSLKQPLTVEDEFDTSQR------IEIVGGKGA-PRVRALVVEVAIALA 83
           S L LT+ N   S   P       D  QR      IEI+G   +   VR +  ++  A+ 
Sbjct: 101 SPLLLTRNNFHRSSSTPCLSPMRADLQQRRDESSPIEILGNSVSFSFVRQMAKDITKAVK 160

Query: 84  SGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVR 143
            G+ P+ V+SGLGGAY      G+ +A+ KP DEEP A NNPKGF G  LGQPG+KRSVR
Sbjct: 161 KGIDPVAVNSGLGGAYYFKNSRGESVAIVKPTDEEPYAPNNPKGFVGKALGQPGLKRSVR 220

Query: 144 VGETGIRELAAYLLDHDGFAGVPPTALVKISDVGFNVNDTAANSTAPY------KIASLQ 197
           VGETG RE+AAYLLD + FA VPPTALVKI+   FNVND    ++ P       KIASLQ
Sbjct: 221 VGETGYREVAAYLLDKEHFANVPPTALVKITHSIFNVND-GVKASKPMEKMLVSKIASLQ 279

Query: 198 RFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDRHAGNILVKKHDRHGE--AAELVP 255
           +F+ H++D+ E G+S+F V+++HRIGI D+RILN DRH+GN+LVKK D  G     ELVP
Sbjct: 280 QFIPHDYDASEHGTSNFPVSAVHRIGILDIRILNTDRHSGNLLVKKLDGDGMFGQVELVP 339

Query: 256 IDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSI 315
           IDHGLCLPE L+DPYFEW+HWPQAS+PFSE EL+YI NLDP  D E+LR ELP +RE+S+
Sbjct: 340 IDHGLCLPETLEDPYFEWIHWPQASIPFSEDELKYIANLDPLGDCEMLRRELPMVREASL 399

Query: 316 RVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESMMNMSDDDG 375
           RVL+LCTIFLK+ AA GLCL +IGEMMTRE   G+E+ S +E +C    E+M  + + D 
Sbjct: 400 RVLVLCTIFLKEAAANGLCLAEIGEMMTREVRPGDEEPSEIEVVCL---EAMSLIGEKDA 456

Query: 376 ESNDRSEETEEEFEMFKFDNESEDDSNEVLDPP--QRSQNPTKNMSKPSKFPRL------ 427
           ES       + EF+ F  D E   D  + L  P      N    +SK  +          
Sbjct: 457 ESPRSDLGNDIEFQ-FDIDCEEVTDCTKKLALPLGLTFGNARGQLSKVEETTEDGEEEEE 515

Query: 428 ----------STVRSLPGLHEAAAMSPLYEENSSEDDETEKQTIKENGSRVDEIKAAADA 477
                     + +  +P +  + ++       S+   E  ++  K  G+RV+   A A +
Sbjct: 516 EDREEEENDRADLEKMPTIKLSMSL------KSTLLGEKSQKYQKHPGARVES--AYASS 567

Query: 478 MTRSMSFSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIERTKSMKL----KKRL 533
             RS    + +       +   DM E EW +FLE ++ LL   IE+ KS+ L    ++RL
Sbjct: 568 AHRSADEQIPS---STSFVKLSDMSEEEWTIFLEKYQELLYPAIEKRKSITLGQKQRQRL 624

Query: 534 GSSCEF 539
           G+SC+F
Sbjct: 625 GTSCQF 630

The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6EC: 7

>sp\|Q5XIL2\|P4K2B_RAT Phosphatidylinositol 4-kinase type 2-beta OS=Rattus norvegicus GN=Pi4k2b PE=2 SV=1	Back alignment and function description

>sp\|Q8CBQ5\|P4K2B_MOUSE Phosphatidylinositol 4-kinase type 2-beta OS=Mus musculus GN=Pi4k2b PE=2 SV=1	Back alignment and function description

>sp\|Q49GP5\|P4K2B_DANRE Phosphatidylinositol 4-kinase type 2-beta OS=Danio rerio GN=pi4k2b PE=2 SV=1	Back alignment and function description

>sp\|Q8TCG2\|P4K2B_HUMAN Phosphatidylinositol 4-kinase type 2-beta OS=Homo sapiens GN=PI4K2B PE=1 SV=1	Back alignment and function description

>sp\|Q6DCQ8\|P4K2B_XENLA Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus laevis GN=pi4k2b PE=2 SV=1	Back alignment and function description

>sp\|Q28G26\|P4K2B_XENTR Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus tropicalis GN=pi4k2b PE=2 SV=1	Back alignment and function description

>sp\|Q5ZIK0\|P4K2B_CHICK Phosphatidylinositol 4-kinase type 2-beta OS=Gallus gallus GN=PI4K2B PE=2 SV=1	Back alignment and function description

>sp\|Q9BTU6\|P4K2A_HUMAN Phosphatidylinositol 4-kinase type 2-alpha OS=Homo sapiens GN=PI4K2A PE=1 SV=1	Back alignment and function description

>sp\|Q2TBE6\|P4K2A_MOUSE Phosphatidylinositol 4-kinase type 2-alpha OS=Mus musculus GN=Pi4k2a PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		539
255565354		570	inositol or phosphatidylinositol kinase,	0.996	0.942	0.646	0.0
224089889		534	predicted protein [Populus trichocarpa]	0.949	0.958	0.647	0.0
359481444		563	PREDICTED: probable phosphatidylinositol	0.994	0.952	0.616	0.0
449453228		544	PREDICTED: probable phosphatidylinositol	0.970	0.961	0.539	1e-161
297816982		535	inositol or phosphatidylinositol kinase	0.940	0.947	0.530	1e-147
356570405		501	PREDICTED: probable phosphatidylinositol	0.710	0.764	0.635	1e-143
145339580		536	phosphatidylinositol 3- and 4-kinase-lik	0.940	0.945	0.530	1e-142
7594538		533	putative protein [Arabidopsis thaliana]	0.940	0.951	0.530	1e-142
15226765		561	phosphoinositide 4-kinase gamma 1 [Arabi	0.955	0.918	0.5	1e-142
19310381		560	At2g40850/T20B5.5 [Arabidopsis thaliana]	0.953	0.917	0.498	1e-140

>gi\|255565354\|ref\|XP_002523668.1\| inositol or phosphatidylinositol kinase, putative [Ricinus communis] gi\|223537068\|gb\|EEF38703.1\| inositol or phosphatidylinositol kinase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/572 (64%), Positives = 435/572 (76%), Gaps = 35/572 (6%)

Query: 1   MAVAIDQHHGFKPFSRSQRCRLQSFTQLDYSILGLTQTNLAHSLKQPLTV---------- 50
           MAVAIDQ+HGF+PF+RSQRCRLQSFT  DY+I   +QTNL HSLKQ   V          
Sbjct: 1   MAVAIDQNHGFRPFNRSQRCRLQSFTHFDYNIHEPSQTNLNHSLKQVFEVANIHRSFSTP 60

Query: 51  --------EDEFDTSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLP 102
                   E+EFD + R+EIVGG GAPRVRALVVEVAIA+ASGV P+PVSSGLGGAY L 
Sbjct: 61  CISLSTGFEEEFDLNARVEIVGGHGAPRVRALVVEVAIAMASGVDPMPVSSGLGGAYFLR 120

Query: 103 GRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGF 162
            RNGD IAVAKPIDEEPLAFNNPKGFGGLM+GQPG++ SVRVG TGIRELAAYLLDH GF
Sbjct: 121 SRNGDNIAVAKPIDEEPLAFNNPKGFGGLMIGQPGMQHSVRVGGTGIRELAAYLLDHGGF 180

Query: 163 AGVPPTALVKISDVGFNVNDTAANSTAP-YKIASLQRFVEHEFDSGELGSSSFSVASIHR 221
           AGVPPTALVKI+ VGF+ ND AA+ + P +KIASLQRFV+H+FD+GELG S FSVAS+HR
Sbjct: 181 AGVPPTALVKIAHVGFHANDDAADISPPSHKIASLQRFVDHDFDAGELGPSGFSVASVHR 240

Query: 222 IGIFDVRILNLDRHAGNILVKKHDRHGE----AAELVPIDHGLCLPEWLDDPYFEWLHWP 277
           IGIFD+R+LNLDRHAGNILVKK+ +H       AELVPIDHGLCLPE LD+PYFEWLHWP
Sbjct: 241 IGIFDIRLLNLDRHAGNILVKKNGQHENYAVGTAELVPIDHGLCLPEGLDNPYFEWLHWP 300

Query: 278 QASVPFSEPELEYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGD 337
           QASVPFSE E EYI NLDP+ DAE LR ELP+LRESSIRVL+LCTIFLKQ A AG CL D
Sbjct: 301 QASVPFSETESEYISNLDPFEDAEFLRNELPSLRESSIRVLVLCTIFLKQAATAGFCLAD 360

Query: 338 IGEMMTREFCGGEEKLSVLETLCAKVKESMMNMSDDDGE-------SNDRSEETEEEFEM 390
           IGEMMTRE CGGEE LSVLE LCAK K S ++ S+D+ +       +N++  +  EE  +
Sbjct: 361 IGEMMTREPCGGEENLSVLENLCAKAKASAVSTSNDEADDDHDGNMNNEQIRDENEEVTI 420

Query: 391 FKFDNESEDDSNEVLDPPQRSQNPTKNMSKPSKFPRLSTVRSLPGLHEAAAMSPLYEENS 450
           F+FD+ESE+ SN V D PQ   +P+ NM   SK P  S+ RS+P LH   A+SP YEE  
Sbjct: 421 FQFDDESENASNGVSDVPQILPSPS-NMDNQSKIPNFSSSRSMPRLHN-LALSPPYEEYD 478

Query: 451 SEDDET--EKQTIKENGSRVDEIKAAA-DAMTRSMSFSVRNCNCEAEGLAFGDMDEGEWE 507
            ++++   E++ IKEN    DE  + A   +TRS+S+SV NCNCE E ++ GDM +GEWE
Sbjct: 479 YDNNDARHEEKLIKENRRNDDENGSKALGGLTRSISYSVENCNCETESISLGDMSKGEWE 538

Query: 508 MFLETFEVLLPEVIERTKSMKLKKRLGSSCEF 539
           +FL+ FE LLPE  E TK M  K RLG+SC+F
Sbjct: 539 LFLKCFEKLLPEAFEGTKCMAPKLRLGTSCQF 570

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224089889\|ref\|XP_002308853.1\| predicted protein [Populus trichocarpa] gi\|222854829\|gb\|EEE92376.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359481444\|ref\|XP_002278311.2\| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449453228\|ref\|XP_004144360.1\| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Cucumis sativus] gi\|449526495\|ref\|XP_004170249.1\| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297816982\|ref\|XP_002876374.1\| inositol or phosphatidylinositol kinase [Arabidopsis lyrata subsp. lyrata] gi\|297322212\|gb\|EFH52633.1\| inositol or phosphatidylinositol kinase [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|356570405\|ref\|XP_003553379.1\| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Glycine max]	Back alignment and taxonomy information

>gi|145339580|ref|NP_191219.2| phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana] gi|334186020|ref|NP_001190105.1| phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana] gi|110739176|dbj|BAF01504.1| hypothetical protein [Arabidopsis thaliana] gi|332646021|gb|AEE79542.1| phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana] gi|332646022|gb|AEE79543.1| phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|7594538\|emb\|CAB88063.1\| putative protein [Arabidopsis thaliana] gi\|91806588\|gb\|ABE66021.1\| phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|15226765\|ref\|NP_181617.1\| phosphoinositide 4-kinase gamma 1 [Arabidopsis thaliana] gi\|2623299\|gb\|AAB86445.1\| hypothetical protein [Arabidopsis thaliana] gi\|330254796\|gb\|AEC09890.1\| phosphoinositide 4-kinase gamma 1 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|19310381\|gb\|AAL84930.1\| At2g40850/T20B5.5 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		539
TAIR\|locus:2058485		561	PI4K GAMMA 1 "AT2G40850" [Arab	0.938	0.901	0.501	3.6e-128
TAIR\|locus:2102604		536	AT3G56600 [Arabidopsis thalian	0.673	0.677	0.612	3.8e-127
TAIR\|locus:2028798		630	AT1G26270 "AT1G26270" [Arabido	0.925	0.792	0.451	4.1e-104
TAIR\|locus:2023865		622	AT1G13640 "AT1G13640" [Arabido	0.825	0.715	0.480	3.8e-101
TAIR\|locus:2056799		650	PI4K GAMMA 7 "AT2G03890" [Arab	0.717	0.595	0.506	8.7e-95
TAIR\|locus:2169774		574	AT5G24240 [Arabidopsis thalian	0.526	0.494	0.423	1.2e-51
TAIR\|locus:2039064		566	PI4K GAMMA 4 "phosphoinositide	0.532	0.507	0.395	4e-51
TAIR\|locus:2019419		301	AT1G64460 [Arabidopsis thalian	0.480	0.860	0.402	6.2e-46
DICTYBASE\|DDB_G0291370		401	DDB_G0291370 "phosphatidylinos	0.538	0.723	0.368	9.9e-39
TAIR\|locus:2196914		649	AT1G27570 [Arabidopsis thalian	0.402	0.334	0.307	1.7e-11

TAIR\|locus:2058485 PI4K GAMMA 1 "AT2G40850" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
 Identities = 277/552 (50%), Positives = 365/552 (66%)

Query:    11 FKPFSRS-QRCRLQSFTQLDYSILGLT------QTNLAHSLKQPL-------TVEDEFD- 55
             F  F+RS QRCRLQS T LD++ L  +        N+  S+  P         +E++   
Sbjct:    31 FPYFNRSSQRCRLQSLTNLDFNFLAQSFNHTFEDDNIHRSVSSPCFSIAASANMEEDLKA 90

Query:    56 -TSQRIEIVGGKGAPRVRALVVEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKP 114
              T+ RIEI+GG+  P VRALV EV +A+ SG +P+ + SG+GGAYLL    G  IAVAKP
Sbjct:    91 TTAPRIEILGGQRVPTVRALVAEVTMAMVSGAQPLLLPSGMGGAYLLQTGKGHNIAVAKP 150

Query:   115 IDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHDGFAGVPPTALVKIS 174
             +DEEPLAFNNPK  G LMLGQPG+K S+ VGETGIRELAAYLLD+ GF+GVPPTALV IS
Sbjct:   151 VDEEPLAFNNPKKSGNLMLGQPGMKHSIPVGETGIRELAAYLLDYQGFSGVPPTALVSIS 210

Query:   175 DVGFNVNDTAANSTAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNLDR 234
              V F+V+D  + S+ PYK+ASLQRFV H+FD+GELG  SF+  S+HRIGI DVR+LNLDR
Sbjct:   211 HVPFHVSDAFSFSSMPYKVASLQRFVGHDFDAGELGPGSFTATSVHRIGILDVRLLNLDR 270

Query:   235 HAGNILVKKHDRHGEA------AELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPEL 288
             HAGN+LVK+ D+  EA      AELVPIDHGLCLPE LDDPYFEWL+WPQA VPFS+ EL
Sbjct:   271 HAGNMLVKRCDKK-EAYNRLGTAELVPIDHGLCLPECLDDPYFEWLNWPQALVPFSDTEL 329

Query:   289 EYICNLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCG 348
             +YI NLDP++DAE+LRTEL +L ES+IRVL++CT+FLKQ AAAGLCL +IGE MTR+F  
Sbjct:   330 DYISNLDPFKDAELLRTELHSLPESAIRVLVVCTVFLKQAAAAGLCLAEIGEKMTRDFSK 389

Query:   349 GEEKLSVLETLCAKVKESMMNMSDDDGE-SNDRSXXXXXXX-XMFKFDNESEDDSNEVLD 406
             GEE  S+LETLC K K S+   + +D + S++ +         MFKFD     D+     
Sbjct:   390 GEESFSLLETLCTKAKASVFGKTSEDSDYSHEGNEVNTELQCGMFKFDG---GDT----- 441

Query:   407 PPQRSQNPTKNMSKPSKFPRLSTVRSLPGLHEAAAMSPLYEENSSEDDETEKQTIKENGS 466
             P +   +   ++SKP   PR     ++P     A+MS    +  +  +++ K+  K+ G 
Sbjct:   442 PCEAEISEVFHVSKPPLVPRGPRANTIPN-DVTASMSSSQNQRITHQEKSAKE--KKRGG 498

Query:   467 RVDEIKAAADAMTRSMSFSVRNCNCEAEGLAFGDMDEGEWEMFLETFEVLLPEVIERTKS 526
             + +          RS S  +   + E++G++F DM   EW+ FL++F+ LL + + +  +
Sbjct:   499 KQER------CTVRSKSPPISPNHDESKGVSFVDMTTVEWDTFLQSFQTLLQDALSKGST 552

Query:   527 MKLKKRLGSSCE 538
                  RLG SCE
Sbjct:   553 ----PRLGCSCE 560

GO:0005575 "cellular_component" evidence=ND

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

TAIR\|locus:2102604 AT3G56600 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2028798 AT1G26270 "AT1G26270" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2023865 AT1G13640 "AT1G13640" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2056799 PI4K GAMMA 7 "AT2G03890" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2169774 AT5G24240 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039064 PI4K GAMMA 4 "phosphoinositide 4-kinase gamma 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2019419 AT1G64460 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0291370 DDB_G0291370 "phosphatidylinositol 3-kinase-related protein kinase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

TAIR\|locus:2196914 AT1G27570 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.67	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		539
pfam00454		233	pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3-	9e-38
TIGR03843		253	TIGR03843, TIGR03843, conserved hypothetical prote	3e-05

>gnl\|CDD\|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase	Back alignment and domain information

 Score =  138 bits (350), Expect = 9e-38
 Identities = 63/233 (27%), Positives = 84/233 (36%), Gaps = 46/233 (19%)

Query: 137 GVKRSVRVGETGIRELAAYLLDH--------------DGFAGVPPTALVKISDVGFNVND 182
           G+   +  GE   R LAAYL+                   A +P T +VK     FN + 
Sbjct: 23  GLMNKLLSGEGLDRRLAAYLVIPLGPGSGLIEWVPNSTTLAEIPRTYMVKKGIPLFNYSR 82

Query: 183 TAA----NSTAPYKIASLQRFVEHEFDSGELGSS-SFSVASIHRIGIFDVRILNLDRHAG 237
                   +    K+  LQ FV+H  D+ E G +    V S   + + D  + N DRH  
Sbjct: 83  KVLVFESRTALFPKVGLLQWFVKHFPDAEEWGEARKNFVRSCAGMSVLDYILGNGDRHLD 142

Query: 238 NILVKKHDRHGEAAELVPIDHGLCLPEW-----LDDPYFEWLHWPQASVPFSEPELEYIC 292
           NILV K        +L  ID GLC P+       +   F          PF E    Y  
Sbjct: 143 NILVDK-----TTGKLFHIDFGLCFPKAKRGPKPERVPFRLTR------PFVEAMGGY-- 189

Query: 293 NLDPYRDAEILRTELPTLRESSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTRE 345
             DP  D  + R    T  E+  R L L T  L       L + + G    R 
Sbjct: 190 --DPSGDEGLFRELCETAYEALRRNLNLLTNLL-------LLMVEDGLPDWRS 233

Some members of this family probably do not have lipid kinase activity and are protein kinases, . Length = 233

>gnl\|CDD\|234372 TIGR03843, TIGR03843, conserved hypothetical protein	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		539
KOG2381		286	consensus Phosphatidylinositol 4-kinase [Signal tr	100.0
TIGR03843		253	conserved hypothetical protein. This model represe	100.0
PF00454		235	PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina	99.18
KOG3829		486	consensus Uncharacterized conserved protein [Funct	98.01
PF06702		221	DUF1193: Protein of unknown function (DUF1193); In	96.5
PF07804		79	HipA_C: HipA-like C-terminal domain; InterPro: IPR	95.79
cd00895		354	PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl	92.26
PF09192		275	Act-Frag_cataly: Actin-fragmin kinase, catalytic;	90.27
cd05177		354	PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c	89.84
cd00893		289	PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I	88.45
cd05168		293	PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T	88.4
cd00894		365	PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c	86.22
cd05165		366	PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I,	85.51
cd05175		366	PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c	85.13
cd05174		361	PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c	85.1
cd05176		353	PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c	84.39
KOG0903		847	consensus Phosphatidylinositol 4-kinase, involved	84.25
cd00891		352	PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic	84.06
cd00896		350	PI3Kc_III Phosphoinositide 3-kinase (PI3K), class	83.74
cd05167		311	PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K),	83.53
cd05173		362	PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl	83.44
cd05166		353	PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I	83.35
cd05169		280	PIKKc_TOR TOR (Target of rapamycin), catalytic dom	83.02
PTZ00303		1374	phosphatidylinositol kinase; Provisional	81.61
smart00146		202	PI3Kc Phosphoinositide 3-kinase, catalytic domain.	80.25

>KOG2381 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=1.6e-70  Score=550.92  Aligned_cols=281  Identities=45%  Similarity=0.690  Sum_probs=261.6

Q ss_pred             HHHHHHHHcCCCCccccCCCceEEEEEccCCCEEEEEecCCCCCcccCCCCCCCCCcCCCCCCccccccCcchhh-hHHH
Q 040648           76 VEVAIALASGVKPIPVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIR-ELAA  154 (539)
Q Consensus        76 ~~v~~ai~~Gi~P~~i~~GSgGSYfv~~~~G~~vaVFKP~DEEP~a~nNPkG~~~~~~g~~g~~rg~lvge~a~R-EVAA  154 (539)
                      .++..|++.|+.|++++.|++|+|||++..|..++||||+|||||+.+||+|......|+||+++||++||+++| |+||
T Consensus         2 ~~~~~a~~~g~~p~~~~~g~~gayf~~~~~~~~~~v~kP~deEp~~~~Npk~~~~~~~g~~~~~~~~~v~~~g~~~E~aa   81 (286)
T KOG2381|consen    2 REAIEAIEKGIFPELLPLGSGGAYFMQDTSGWIVGVFKPKDEEPYARNNPKGTKVLQRGQCGCKRSCLVGNSGYRSEAAA   81 (286)
T ss_pred             chHHHHhhcCCCcccccCCCchhHHHhccccceeeccCCCcccccccCCCccCchhhccccccccceeccCccccchhhh
Confidence            578899999999999999999999999999999999999999999999999988888999999999999999987 9999


Q ss_pred             HhhccCCCCCCCCeeEEEeecccccccccccC--CCCCCCceeEeecccccCCcCCcCCCcchhhhhhhhhhcceeeecC
Q 040648          155 YLLDHDGFAGVPPTALVKISDVGFNVNDTAAN--STAPYKIASLQRFVEHEFDSGELGSSSFSVASIHRIGIFDVRILNL  232 (539)
Q Consensus       155 YLLD~~Gf~~VPpT~lV~l~hp~Fny~~g~~~--~~~p~KiGSlQ~FV~~~~~a~d~gp~~Fpv~evHKIaILDirI~Nt  232 (539)
                      |||||++|+.||+|.+|+++|++|||+++...  .....|+||+|+||++ .++.|+++.+|++.++|||+||||||+||
T Consensus        82 yLlD~~~~~~Vp~t~~v~i~~~~f~~~~~~~~~~~~~~~k~gs~q~Fve~-~~~~d~~~~~F~~~e~hkivvlD~ri~Nt  160 (286)
T KOG2381|consen   82 YLLDHPEFNDVPRTALVKITHFTFNYNAAFLSKRQGKKSKIGSLQLFVEG-YSAADYGLRRFEAEEVHKIVVLDIRIRNT  160 (286)
T ss_pred             hccCccccCCCCceeeEEEeeecccccccceecccccccchhhHHHhhcC-ccccceeEEeccccccceeEEEEEEeecc
Confidence            99999999999999999999999999998532  2334799999999999 77889999999999999999999999999


Q ss_pred             CCCCCceEEeecCCCCCceeEEeecccccCcccCCCCCccccccCCCCCCCChhHHHHHhcCChHHhHHHHHhcCCCChH
Q 040648          233 DRHAGNILVKKHDRHGEAAELVPIDHGLCLPEWLDDPYFEWLHWPQASVPFSEPELEYICNLDPYRDAEILRTELPTLRE  312 (539)
Q Consensus       233 DRh~GNiLV~~~~~~~~~~~LvpIDHGLcFP~~l~d~~f~Wl~WPqA~~PFS~etl~yI~sLD~~~D~elLr~~l~~lre  312 (539)
                      |||+|||||++.+..  ......+|||||||.+|+|+||+|++||||+.|||+++++||  ||+..|+++||    ++.+
T Consensus       161 DRh~~N~lvk~~~~~--~~~~~~~Dhgl~fP~~~~d~~f~W~~~pqa~~pfs~~~~~yi--L~~~~d~~~~r----~l~~  232 (286)
T KOG2381|consen  161 DRHAGNWLVKKEPTL--EQAAILGDHGLCFPEKHPDEWFEWLYWPQAKIPFSEEIVDYI--LDPLTDCNLLR----ELPE  232 (286)
T ss_pred             CCCCCceeEEeccCc--ccccccccCceeCcccCCccccchHHHHhhcccccHHHHhcc--CCcccCHHHHH----HhHH
Confidence            999999999986432  334445599999999999999999999999999999999999  99999999999    5789


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHhhhhhcccCCCCCCCchHHHHHHHHHHhhcc
Q 040648          313 SSIRVLMLCTIFLKQTAAAGLCLGDIGEMMTREFCGGEEKLSVLETLCAKVKESMMN  369 (539)
Q Consensus       313 eclr~LrisT~~LK~aa~~GLtl~eIg~~m~Re~~~~~e~~S~lE~l~~~A~~~~~~  369 (539)
                      +++|+++++|+|||+++++|||+.+||.+|+|+++.+    |.+|.+|.+|...+.+
T Consensus       233 ~~~~~~~~~~~f~k~~~~~~l~~~~~g~~~~re~~~~----~~~~~~~~~~~~~~~~  285 (286)
T KOG2381|consen  233 DLLRLFKVDTGFLKKAFEKQLSVMRIGILNLREALKD----SKLEQLCVEAKASVVE  285 (286)
T ss_pred             HHHHHHhhchhhhHHHHHhCchHhhccceehHHHHhh----CccHHHHHhhhhcccC
Confidence            9999999999999999999999999999999999864    9999999999887754

>TIGR03843 conserved hypothetical protein	Back alignment and domain information

>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases	Back alignment and domain information

>KOG3829 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF06702 DUF1193: Protein of unknown function (DUF1193); InterPro: IPR009581 This family is baesd on the C terminus of several hypothetical eukaryotic proteins of unknown function	Back alignment and domain information

>PF07804 HipA_C: HipA-like C-terminal domain; InterPro: IPR012893 The members of this entry are similar to a region close to the C terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT)	Back alignment and domain information

>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes	Back alignment and domain information

>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases	Back alignment and domain information

>PTZ00303 phosphatidylinositol kinase; Provisional	Back alignment and domain information

>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		539
1cja_A		342	Protein (actin-fragmin kinase); transferase; HET:	97.78
3akj_A		325	CTKA; protein kinase, transferase; 2.00A {Helicoba	95.91
3tpd_A		440	Serine/threonine-protein kinase HIPA; persistence,	86.89

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3	Back alignment and structure

Probab=97.78  E-value=3.3e-05  Score=79.68  Aligned_cols=136  Identities=19%  Similarity=0.197  Sum_probs=85.3

Q ss_pred             cccCCCceEEEEEccCCCEEEEEecCCCCCcccCCCCCCCCCcCCCCCCccccccCcchhhhHHHHhhccC-CCCCCCCe
Q 040648           90 PVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHD-GFAGVPPT  168 (539)
Q Consensus        90 ~i~~GSgGSYfv~~~~G~~vaVFKP~DEEP~a~nNPkG~~~~~~g~~g~~rg~lvge~a~REVAAYLLD~~-Gf~~VPpT  168 (539)
                      ++..|++|.|||.. ++ ...|.|+..                              .-..|+=||.|-.. |.. +|..
T Consensus        76 ~s~~Gstgvff~~t-d~-~~~VVK~s~------------------------------~l~~E~l~s~LA~~LGlp-iP~~  122 (342)
T 1cja_A           76 RSEKGTEGLFFVET-ES-GVFIVKRST------------------------------NIESETFCSLLCMRLGLH-APKV  122 (342)
T ss_dssp             ECCSTTSCEEEEEE-SS-CEEEEECCT------------------------------THHHHHHHHHHHHHHTCC-CCCE
T ss_pred             eccCCCCCeEEEEe-CC-CEEEEeCcH------------------------------HHHHHHHHHHHHHHhCCC-CCCe
Confidence            67889999999987 33 477888651                              12678888888654 654 5999


Q ss_pred             eEEEeeccccccc-cc-ccCCCC-------CC-CceeEeecccccCCcCCcC----CCcchhh---hhhhhhhcceeeec
Q 040648          169 ALVKISDVGFNVN-DT-AANSTA-------PY-KIASLQRFVEHEFDSGELG----SSSFSVA---SIHRIGIFDVRILN  231 (539)
Q Consensus       169 ~lV~l~hp~Fny~-~g-~~~~~~-------p~-KiGSlQ~FV~~~~~a~d~g----p~~Fpv~---evHKIaILDirI~N  231 (539)
                      .++++..+-|.-- .. ......       -. ...=++.||++..-. ++.    ...|..+   ++-||.+||+.|+|
T Consensus       123 Riv~~~~~E~~e~~~~L~~~~~~~~~l~~l~~~~~~l~meyv~G~~L~-e~~~~~~~~~f~~~~~k~LG~Ii~FDi~InN  201 (342)
T 1cja_A          123 RVVSSNSEEGTNMLECLAAIDKSFRVITTLANQANILLMELVRGITLN-KLTTTSAPEVLTKSTMQQLGSLMALDVIVNN  201 (342)
T ss_dssp             EEEESSSHHHHHHHHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEEST-TCCSSSHHHHSCHHHHHHHHHHHHHHHHHTC
T ss_pred             eEEeeCcHHHHHHHHHHHHhhhhhHHHHHhhcccceehhhhcCCCccc-cchhhhhhhhcCHHHHHhhchhheehhhhcC
Confidence            9998764433100 00 000000       01 122458888754421 111    1234333   34479999999999


Q ss_pred             CCCC------C---CceEEeecCCCCCceeEEeecccccCcc
Q 040648          232 LDRH------A---GNILVKKHDRHGEAAELVPIDHGLCLPE  264 (539)
Q Consensus       232 tDRh------~---GNiLV~~~~~~~~~~~LvpIDHGLcFP~  264 (539)
                      .||-      .   +|||+..+     ..++++|||+.||-.
T Consensus       202 ~DR~Pl~W~n~GN~~NIL~~~~-----n~~~~~IDhn~af~~  238 (342)
T 1cja_A          202 SDRLPIAWTNEGNLDNIMLSER-----GATVVPIDSKIIPLD  238 (342)
T ss_dssp             CSSSCSSSCSCCCGGGEEEESB-----TTCEEECSCCCCCCC
T ss_pred             CccCcccccCCCChhheEEeCC-----CCeEEEEcCCccccC
Confidence            9997      3   36788764     238999999999986

PyMOL of 1cja

>3akj_A CTKA; protein kinase, transferase; 2.00A {Helicobacter pylori} PDB: 3akk_A* 3akl_A*	Back alignment and structure

>3tpd_A Serine/threonine-protein kinase HIPA; persistence, multidrug tolerance, HIPB, transferase; 1.50A {Escherichia coli} PDB: 3tpe_A* 3tpv_B* 3tpt_A* 3hzi_A* 2wiu_A 3tpb_A 3dnu_A 3dnt_A 3dnv_A* 3fbr_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		539
d1cjaa_		342	Actin-fragmin kinase, catalytic domain {Physarum p	96.86
d1e7ua4		369	Phoshoinositide 3-kinase (PI3K), catalytic domain	83.13

>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Actin-fragmin kinase, catalytic domain
domain: Actin-fragmin kinase, catalytic domain
species: Physarum polycephalum [TaxId: 5791]

Probab=96.86  E-value=0.00061  Score=67.70  Aligned_cols=133  Identities=20%  Similarity=0.221  Sum_probs=86.6

Q ss_pred             cccCCCceEEEEEccCCCEEEEEecCCCCCcccCCCCCCCCCcCCCCCCccccccCcchhhhHHHHhhccC-CCCCCCCe
Q 040648           90 PVSSGLGGAYLLPGRNGDVIAVAKPIDEEPLAFNNPKGFGGLMLGQPGVKRSVRVGETGIRELAAYLLDHD-GFAGVPPT  168 (539)
Q Consensus        90 ~i~~GSgGSYfv~~~~G~~vaVFKP~DEEP~a~nNPkG~~~~~~g~~g~~rg~lvge~a~REVAAYLLD~~-Gf~~VPpT  168 (539)
                      ++..||+|++||...+|  +.|-|...                              +...|+=+|.|-+. |.. ||..
T Consensus        76 ~s~~Gs~Gv~FV~~e~g--aiVlK~s~------------------------------tta~E~y~~eLAr~LGvp-vPqm  122 (342)
T d1cjaa_          76 RSEKGTEGLFFVETESG--VFIVKRST------------------------------NIESETFCSLLCMRLGLH-APKV  122 (342)
T ss_dssp             ECCSTTSCEEEEEESSC--EEEEECCT------------------------------THHHHHHHHHHHHHHTCC-CCCE
T ss_pred             EeecCCceEEEEEcCCc--eEEEecCC------------------------------chHHHHHHHHHHHHhCCC-CCce
Confidence            78889999999977666  67777632                              13458888888754 554 5888


Q ss_pred             eEEEeeccccccccc----cc------CCCCCCCceeEeecccccCCcCCcCCCcch-------hhhhhhhhhcceeeec
Q 040648          169 ALVKISDVGFNVNDT----AA------NSTAPYKIASLQRFVEHEFDSGELGSSSFS-------VASIHRIGIFDVRILN  231 (539)
Q Consensus       169 ~lV~l~hp~Fny~~g----~~------~~~~p~KiGSlQ~FV~~~~~a~d~gp~~Fp-------v~evHKIaILDirI~N  231 (539)
                      ++++....-|.....    .+      ...+..--+-+|.||++.. .-+.+....+       ..++-||..||+.|+|
T Consensus       123 RvI~~~~~E~~~~~~~~l~~~e~d~~I~sel~~A~~liMeYvpG~~-l~e~~~~~a~~~fs~~~l~~LGkIiaFDifInN  201 (342)
T d1cjaa_         123 RVVSSNSEEGTNMLECLAAIDKSFRVITTLANQANILLMELVRGIT-LNKLTTTSAPEVLTKSTMQQLGSLMALDVIVNN  201 (342)
T ss_dssp             EEEESSSHHHHHHHHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEE-STTCCSSSHHHHSCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEecCCCHHHHHHHHHHhcCCChhHHHHHHHhcccceeeeccCCcc-ccccccccchhhhcHHHHHHhhhHHHHHHHHcC
Confidence            887644333321100    00      0011122577899997644 3344433322       3456689999999999


Q ss_pred             CCC---------CCCceEEeecCCCCCceeEEeeccccc
Q 040648          232 LDR---------HAGNILVKKHDRHGEAAELVPIDHGLC  261 (539)
Q Consensus       232 tDR---------h~GNiLV~~~~~~~~~~~LvpIDHGLc  261 (539)
                      -||         |..|+|+...     ...+++||-|..
T Consensus       202 ~DR~PL~Wrn~GN~~Niml~~n-----~~~~~~IDs~i~  235 (342)
T d1cjaa_         202 SDRLPIAWTNEGNLDNIMLSER-----GATVVPIDSKII  235 (342)
T ss_dssp             CSSSCSSSCSCCCGGGEEEESB-----TTCEEECSCCCC
T ss_pred             CccccccccCCCCccceEEecC-----CcEEEEecCCcc
Confidence            999         4567999864     467999998875

PyMOL of d1cjaa_