Citrus Sinensis ID: 040723

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610
MFCNTFSERKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccHHHHccccccccccccccccHHHHHHHHHccccccHHHHHHHHccccccccccccccHHHHHHcccccHHHHHcccccccEEEEEEccccccccEEEEEcccccccccccccEEcccccccccHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHcccccccccHHccccccHHHHHHcHHHHHHccccccccEEEcccccHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccccccccc
ccccccccccccccccccccEEcccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccHHHHHHHHcHHHHHHHccccccEccccccHHEEccccccccccccccEEcccccccccHHHHHHHHHHcccHHHHHHHHHHHcccEEEEcHHHHHHHHHHHHHccccccccccccccEEEEEEEEcccccEEEEEEEEcccccHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHccccHHHHcHHHHHHHcccEEEcccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHcccHHHcccccccccccHHHHHHHHHHHHHHHcHHHHHHHccHHHHHcccccccccEcccccccccccHHHHHHHHcHHHHHHHHEccHHHHHHHHHHHHHHccEcccccEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccEccccccEccccc
mfcntfserkpigdenraddiyvprdeafsdiklaafdskktysfvstlptlietkfdgdkkFEYFTEIDElfdedgfsippnlnesiWNIIPRWIRKIKETGEqylqfetpealhkefnVEHIVIRVFFTfagdkffwfrDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALkttlygsrtifflnpddtlrpvaieltrppmdgkpfwrkvytpswnstdSWLWRLAKAHVLAHDAGYHQLVSHWLSthcvvepyviatnrqlsvihpiyrllhphfryTVEINAFARKDLvnaggiiestfspgkysmELSSVAYDKQWRFDHEALPKNLISRrmaaedpcsphglkltiedypyakdgLDLWDILKKWVTDYVNhyypnqslvesdEELQAWWTEIrtvghgdkedepwwpvlktpqdLIETITTIIWVTSGQHAavnfgqytyagyfpnrpaitrlnmpdedksNEIWKIFNekpdnallhtfpnptqATKVMLILSLLschspdeeflgkdmepawgedpeiKVAFEEFRGRLMELEGtinerngdinlknrngagvvpynllkpfwkdgdkekgvpysisi
mfcntfserkpigdenraddiyvprDEAFSDIKlaafdskktysfvstlptlietkfdgdKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDealkttlygsrtifflnpddtlrPVAIEltrppmdgkpfwRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIestfspgkysMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVghgdkedepwwpvlktPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGtinerngdinlknrngaGVVPYnllkpfwkdgdkekgvpysisi
MFCNTFSERKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI
*******************DIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLN*******NEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKD*************
MFCNTFS*************IYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRP**********VYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPD****NEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI
********RKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI
******************DDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSIS*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFCNTFSERKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDKKFEYFTEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLITAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query610 2.2.26 [Sep-21-2011]
O24370899 Linoleate 13S-lipoxygenas N/A no 0.949 0.644 0.573 0.0
P38418896 Lipoxygenase 2, chloropla yes no 0.947 0.645 0.518 0.0
Q8GSM2896 Lipoxygenase 2.3, chlorop N/A no 0.934 0.636 0.498 1e-178
P93184936 Lipoxygenase 2.1, chlorop N/A no 0.942 0.614 0.497 1e-173
Q84YK8941 Probable lipoxygenase 8, no no 0.937 0.607 0.498 1e-172
P38419924 Lipoxygenase 7, chloropla no no 0.932 0.615 0.500 1e-171
Q8GSM3932 Lipoxygenase 2.2, chlorop N/A no 0.944 0.618 0.48 1e-161
Q9CAG3917 Lipoxygenase 6, choloropl no no 0.927 0.617 0.430 1e-146
O24371914 Linoleate 13S-lipoxygenas N/A no 0.919 0.613 0.429 1e-146
Q8H016918 Probable lipoxygenase 6 O no no 0.926 0.615 0.431 1e-145
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function desciption
 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/645 (57%), Positives = 452/645 (70%), Gaps = 66/645 (10%)

Query: 7   SERKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFV-STLPTLIETKFDGDKKFEY 65
           S++ P+  E R+  +YVPRDEAFS++K  AF     YS + + +P L     D +  F +
Sbjct: 280 SKKDPL-SETRSTFVYVPRDEAFSEVKSVAFSGNTVYSVLHAVVPALESVVTDPNLGFPH 338

Query: 66  FTEIDELFDEDGFSIPP--NLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEH 123
           F  ID LF+  G  +P   +    ++N++PR I+ I +T +  L FE+P+ + +      
Sbjct: 339 FPAIDSLFNV-GVDLPGLGDKKSGLFNVVPRLIKAISDTRKDVLLFESPQLVQR------ 391

Query: 124 IVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLIT--------------------- 162
                      DKF WFRD EFARQTLA LNP SI+L+T                     
Sbjct: 392 -----------DKFSWFRDVEFARQTLAGLNPYSIRLVTEWPLRSKLDPKVYGPPESEIT 440

Query: 163 ----------------AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIF 206
                           A+QQKKLFILDYHDL LPYV KV      +E   + LYGSRTIF
Sbjct: 441 KELIEKEIGNYMTVEQAVQQKKLFILDYHDLLLPYVNKV------NELKGSMLYGSRTIF 494

Query: 207 FLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPS-WNSTDSWLWRLAKAHVLAHDAGYHQL 265
           FL P  TL+P+AIELTRPP+D KP W++VY+P+ WN+T +WLW+LAKAHVL+HD+GYHQL
Sbjct: 495 FLTPQGTLKPLAIELTRPPVDDKPQWKEVYSPNDWNATGAWLWKLAKAHVLSHDSGYHQL 554

Query: 266 VSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIEST 325
           VSHWL THC  EPY+IA+NRQLS +HPIYRLLHPHFRYT+EINA AR+ L+NA G+IES+
Sbjct: 555 VSHWLRTHCCTEPYIIASNRQLSAMHPIYRLLHPHFRYTMEINALAREALINANGVIESS 614

Query: 326 FSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGL 385
           F PGKY++ELSS+AY  +WRFD EALP+NLISR +A EDP  PHGLKL IEDYP+A DGL
Sbjct: 615 FFPGKYAIELSSIAYGAEWRFDQEALPQNLISRGLAVEDPNEPHGLKLAIEDYPFANDGL 674

Query: 386 DLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDL 445
            LWDILK+WVT+YVNHYYP  +L+ESD+ELQAWW+EI+ VGHGDK DEPWWP LKTP DL
Sbjct: 675 VLWDILKQWVTNYVNHYYPQTNLIESDKELQAWWSEIKNVGHGDKRDEPWWPELKTPNDL 734

Query: 446 IETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNA 505
           I  ITTI+WVTSG HAAVNFGQY+YAGYFPNRP + R  MP ED + E W+ F  KP+ A
Sbjct: 735 IGIITTIVWVTSGHHAAVNFGQYSYAGYFPNRPTVARSKMPTEDPTAEEWEWFMNKPEEA 794

Query: 506 LLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELE 565
           LL  FP+  QATKVM IL +LS HSPDEE++G+ +EP W EDP I  AFE F G+L ELE
Sbjct: 795 LLRCFPSQIQATKVMAILDVLSNHSPDEEYIGEKIEPYWAEDPVINAAFEVFSGKLKELE 854

Query: 566 GTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI 610
           G I+ RN D  L NRNGAGV+PY LLKP+ + G   KGVPYSISI
Sbjct: 855 GIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPYSISI 899
Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 Back     alignment and function description
>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 Back     alignment and function description
>sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 Back     alignment and function description
>sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1 Back     alignment and function description
>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 Back     alignment and function description
>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query610
255544764 900 lipoxygenase, putative [Ricinus communis 0.947 0.642 0.595 0.0
18461098 895 lipoxygenase [Citrus jambhiri] 0.921 0.627 0.632 0.0
71999169 898 lipoxygenase LOX1 [Populus deltoides] 0.937 0.636 0.593 0.0
71999171 903 lipoxygenase LOX2 [Populus deltoides] 0.936 0.632 0.607 0.0
308943877 901 lipoxygenase [Camellia sinensis] 0.937 0.634 0.606 0.0
229554825 901 lipoxygenase [Camellia sinensis] 0.937 0.634 0.604 0.0
224141179 848 predicted protein [Populus trichocarpa] 0.932 0.670 0.590 0.0
213876486 900 lipoxygenase [Camellia sinensis] 0.937 0.635 0.593 0.0
224053392 897 predicted protein [Populus trichocarpa] 0.936 0.636 0.6 0.0
255544760 789 lipoxygenase, putative [Ricinus communis 0.936 0.723 0.603 0.0
>gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/647 (59%), Positives = 466/647 (72%), Gaps = 69/647 (10%)

Query: 3   CNTFSERKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKF-DGDK 61
           CNT +  + I     +  +YVPRDE FS++K   F +K  YS +  L   +ET   D D 
Sbjct: 284 CNTDTLSESI-----SSSVYVPRDEEFSEVKEHTFSAKTVYSVLHALVPQLETALVDPDL 338

Query: 62  KFEYFTEIDELFDEDGFSIPPNLNESIW-NIIPRWIRKIKETGEQYLQFETPEALHKEFN 120
            F YFT ID LF+E G ++PP L E  W +I+P  I+ I +  ++ L F+TP+ + +   
Sbjct: 339 AFPYFTAIDSLFNE-GVNLPP-LKEQGWKDILPNLIKTITDEAKEVLAFDTPDTMER--- 393

Query: 121 VEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLIT------------------ 162
                         D+FFWFRDEEF RQTLA LNP S+QL+T                  
Sbjct: 394 --------------DRFFWFRDEEFGRQTLAGLNPMSLQLVTEWPLKSELDPEIYGPPES 439

Query: 163 -------------------AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSR 203
                              AI+QKKLF+LDYHDLFLP+V KVR +E+      TTLYGSR
Sbjct: 440 AITTEMIEQQIRGFMTVEEAIKQKKLFMLDYHDLFLPFVSKVRQLEN------TTLYGSR 493

Query: 204 TIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYH 263
           TIFFL PD TLRP+AIELTRPPMDGKP W+  Y P+W+ST  WLWRLAKAHVLAH++GYH
Sbjct: 494 TIFFLTPDGTLRPLAIELTRPPMDGKPQWKDAYVPTWHSTGVWLWRLAKAHVLAHESGYH 553

Query: 264 QLVSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIE 323
           QL+SHWL TH   EPY+IA NRQLSV+HPIYRLLHPHFRYT+EINA AR+ L+NAGGIIE
Sbjct: 554 QLISHWLKTHACTEPYIIAANRQLSVMHPIYRLLHPHFRYTMEINALARQALINAGGIIE 613

Query: 324 STFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKD 383
           S+FSPGKY +E+SSV YDK WRFD +A+P+ LISR MA +DP +PHG+KL IEDYP+A D
Sbjct: 614 SSFSPGKYCLEMSSVIYDKLWRFDQQAMPQELISRGMAVQDPSAPHGVKLRIEDYPFASD 673

Query: 384 GLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQ 443
           GL LWD +K WV+DYVNHYYP+ SL+ SD+ELQA+WTE+RTVGHGDK+DEPWWP LKTP+
Sbjct: 674 GLLLWDAIKAWVSDYVNHYYPDPSLILSDKELQAFWTEVRTVGHGDKKDEPWWPELKTPK 733

Query: 444 DLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPD 503
           DLIE ++TI WVTSG HAAVNFGQY YAGYFPNRP   RL MP ED ++E WK+F EKP+
Sbjct: 734 DLIEIVSTIAWVTSGHHAAVNFGQYAYAGYFPNRPTTARLKMPSEDPTDEGWKMFAEKPE 793

Query: 504 NALLHTFPNPTQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLME 563
             LL TFP+  QATKVM +L +LS HSPDEE++G+ +EPAW EDP IK AFE+F GRL E
Sbjct: 794 VVLLTTFPSQVQATKVMAVLDVLSNHSPDEEYIGEKIEPAWAEDPNIKAAFEKFAGRLKE 853

Query: 564 LEGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI 610
           LEG I+ERN + +LKNRNGAG+VPY LLKPF + G   +GVPYSISI
Sbjct: 854 LEGIIDERNANPSLKNRNGAGIVPYELLKPFSEPGVTARGVPYSISI 900

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|18461098|dbj|BAB84352.1| lipoxygenase [Citrus jambhiri] Back     alignment and taxonomy information
>gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] Back     alignment and taxonomy information
>gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] Back     alignment and taxonomy information
>gi|308943877|gb|ADO51752.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|224141179|ref|XP_002323952.1| predicted protein [Populus trichocarpa] gi|222866954|gb|EEF04085.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255544760|ref|XP_002513441.1| lipoxygenase, putative [Ricinus communis] gi|223547349|gb|EEF48844.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query610
TAIR|locus:2096915896 LOX2 "lipoxygenase 2" [Arabido 0.970 0.660 0.517 9.4e-169
UNIPROTKB|P38419924 CM-LOX1 "Lipoxygenase 7, chlor 0.913 0.602 0.504 5.7e-152
TAIR|locus:2008808917 LOX6 "lipoxygenase 6" [Arabido 0.722 0.480 0.522 1.1e-137
TAIR|locus:2018848919 LOX3 "lipoxygenase 3" [Arabido 0.945 0.627 0.417 2.7e-123
TAIR|locus:2011030859 LOX1 "lipoxygenase 1" [Arabido 0.947 0.672 0.412 4.6e-121
TAIR|locus:2030215926 LOX4 "lipoxygenase 4" [Arabido 0.947 0.624 0.407 7.4e-121
TAIR|locus:2087837886 LOX5 [Arabidopsis thaliana (ta 0.949 0.653 0.409 1.3e-118
UNIPROTKB|P29250870 LOX1.1 "Linoleate 9S-lipoxygen 0.719 0.504 0.451 4.7e-116
ZFIN|ZDB-GENE-060623-19676 zgc:136911 "zgc:136911" [Danio 0.504 0.455 0.323 3.1e-39
ZFIN|ZDB-GENE-050522-330676 zgc:110251 "zgc:110251" [Danio 0.524 0.473 0.322 4.1e-39
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1641 (582.7 bits), Expect = 9.4e-169, P = 9.4e-169
 Identities = 324/626 (51%), Positives = 412/626 (65%)

Query:     8 ERKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFV-STLPTLIETKFDGDKKFEYF 66
             E  P  ++    + YVPRDE FS  K  +F  K   + + S  P +        + F +F
Sbjct:   282 ETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHF 341

Query:    67 TEIDELFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKE-FNVEHIV 125
               I  LF+E G  +P +    +  ++PR I+ + E  +  LQF+ P  ++++ F+     
Sbjct:   342 KAIQNLFEE-GIQLPKDAG--LLPLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDD 398

Query:   126 IRVFFTFAGDKFFWFR-DEEFARQTLARLNPC----SIQLIT----------------AI 164
                  T AG   +  +  EE+    +++L+P        LIT                A+
Sbjct:   399 EFARQTLAGLNPYSIQLVEEWP--LISKLDPAVYGDPTSLITWEIVEREVKGNMTVDEAL 456

Query:   165 QQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPVAIELTRP 224
             + K+LF+LDYHDL LPYV KVR + +      TTLY SRT+FFL+ D TLRPVAIELT P
Sbjct:   457 KNKRLFVLDYHDLLLPYVNKVRELNN------TTLYASRTLFFLSDDSTLRPVAIELTCP 510

Query:   225 PMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPYVIATN 284
             P   KP W++V+TP +++T  WLW LAK H ++HDAGYHQL+SHWL TH   EPY+IA N
Sbjct:   511 PNINKPQWKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAAN 570

Query:   285 RQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQW 344
             RQLS +HPIYRLLHPHFRYT+EINA AR+ LVN GGIIE+ F PGKY++ELSS  Y K W
Sbjct:   571 RQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLW 630

Query:   345 RFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYP 404
             RFD E LP +LI R +A ED  + HG++LTI DYP+A DGL LWD +K+WVTDYV HYYP
Sbjct:   631 RFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYP 690

Query:   405 NQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTSGQHAAVN 464
             ++ L+ SDEELQ WW+E+R +GHGDK+DEPWWPVLKT  DLI  +TTI WVTSG HAAVN
Sbjct:   691 DEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVN 750

Query:   465 FGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKVMLILS 524
             FGQY Y GYFPNRP  TR+ MP ED ++E  K F E P+  LL T+P+  QAT VM+ L 
Sbjct:   751 FGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLD 810

Query:   525 LLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAG 584
             LLS HSPDEE++G+  E +W  +P I  AFE F+G+L  LEG I+ERN +I LKNR GAG
Sbjct:   811 LLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAG 870

Query:   585 VVPYNLLKPFWKDGDKEKGVPYSISI 610
             VV Y LLKP  + G    GVPYSISI
Sbjct:   871 VVKYELLKPTSEHGVTGMGVPYSISI 896
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA;TAS
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0080027 "response to herbivore" evidence=IEP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009617 "response to bacterium" evidence=IEP
GO:0016165 "lipoxygenase activity" evidence=IMP;IDA
GO:0009620 "response to fungus" evidence=IEP
GO:0034440 "lipid oxidation" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP;RCA;TAS
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009414 "response to water deprivation" evidence=TAS
GO:0051707 "response to other organism" evidence=TAS
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050522-330 zgc:110251 "zgc:110251" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P38418LOX2_ARATH1, ., 1, 3, ., 1, 1, ., 1, 20.51860.94750.6450yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.110.691
3rd Layer1.13.11.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_XVII0021
SubName- Full=Putative uncharacterized protein;; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (848 aa)
(Populus trichocarpa)
Predicted Functional Partners:
grail3.0064002701
SubName- Full=Putative uncharacterized protein; (382 aa)
      • 0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query610
pfam00305667 pfam00305, Lipoxygenase, Lipoxygenase 0.0
PLN02337866 PLN02337, PLN02337, lipoxygenase 0.0
PLN02305918 PLN02305, PLN02305, lipoxygenase 0.0
PLN02264919 PLN02264, PLN02264, lipoxygenase 0.0
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information 
 Score =  686 bits (1771), Expect = 0.0
 Identities = 269/617 (43%), Positives = 357/617 (57%), Gaps = 64/617 (10%)

Query: 15  ENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVST-LPTLIETKFDGDKKFEYFTEIDELF 73
           E+R+ D+Y+PRDE F  +K + F +    S +   +P           +F  F ++ +LF
Sbjct: 78  ESRSGDVYLPRDERFGHLKSSDFLTYALKSVLQLVVPAFESVLNSTPSEFNSFEDVRKLF 137

Query: 74  DEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFA 133
            E G  +P ++   I + +P      +  GEQ L+F  P+           VI       
Sbjct: 138 -EGGIKLPTDVLSKI-SPLPVLKEIFRTDGEQILKFPPPK-----------VIER----- 179

Query: 134 GDKFFWFRDEEFARQTLARLNPCSIQLIT------------------------------- 162
             K  W  DEEFAR+ LA  NP  I+ +T                               
Sbjct: 180 -VKSAWMTDEEFAREMLAGANPVVIRRLTEFPPKSKLDPAVYGDQTSPITKEHLEAQLEG 238

Query: 163 -----AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPV 217
                A+Q  +LFILD+HDL  PY+ K+           T LY  RT+ FL  D TL+P+
Sbjct: 239 LTVEEALQNGRLFILDFHDLDGPYLNKIN-------CTTTKLYAPRTLLFLQDDGTLKPL 291

Query: 218 AIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVE 277
           AIEL+ P  DG     +V+ PS +  +S +W LAKA V  +D+GYHQL+SHWL+TH V E
Sbjct: 292 AIELSLPHPDGDGAVSQVFLPSDDGVESSIWLLAKAWVRVNDSGYHQLISHWLNTHAVAE 351

Query: 278 PYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSS 337
           P+VIATNRQLSV+HPI++LL PH+RYT+ INA AR+ L+NAGGI E  FSPGKY +E+SS
Sbjct: 352 PFVIATNRQLSVLHPIFKLLVPHYRYTMNINALARQSLINAGGIFEKAFSPGKYGVEMSS 411

Query: 338 VAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTD 397
            AY K W F  +ALP +LI R +A EDP +PHG++L IEDYPYA DGL++WD +K WV +
Sbjct: 412 AAY-KDWVFTDQALPADLIKRGLAVEDPSAPHGVRLLIEDYPYAVDGLEIWDAIKTWVQE 470

Query: 398 YVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWVTS 457
           YV+ YY     V+ D ELQAWW E+  VGHGDK+DEPWWP L+T + LIE  T IIW  S
Sbjct: 471 YVSLYYKTDEAVKKDPELQAWWKEVVEVGHGDKKDEPWWPKLQTREQLIEFCTIIIWTAS 530

Query: 458 GQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQAT 517
             HAAVNFGQY Y G+ PNRP  +R  MP+       ++   + PD A L T P   QA 
Sbjct: 531 ALHAAVNFGQYDYGGWIPNRPTTSRRFMPEPGTKEATYEELVKNPDKAYLKTIPPKLQAL 590

Query: 518 KVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINL 577
             + ++ +LS H+ DE +LG+  E  W  D E   AF+ F  +L E+E  I ERN D++L
Sbjct: 591 LDLSVIEILSRHASDEVYLGQRDEEHWTSDKEPLAAFKRFGKKLAEIEKKITERNKDLSL 650

Query: 578 KNRNGAGVVPYNLLKPF 594
           KNR+G   +PY LLKP 
Sbjct: 651 KNRSGPVKMPYTLLKPS 667

Length = 667
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 610
PLN02305918 lipoxygenase 100.0
PLN02264919 lipoxygenase 100.0
PLN02337866 lipoxygenase 100.0
PF00305667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
>PLN02305 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-176  Score=1480.23  Aligned_cols=583  Identities=49%  Similarity=0.907  Sum_probs=556.0

Q ss_pred             CCCCCCC--CCCCCCCCCCC---CCccCCCCCCChhhhhhhhhhhHHHHHhhhhhhhhhhcCCCC-CCCCHHHHHHHhhc
Q 040723            2 FCNTFSE--RKPIGDENRAD---DIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDK-KFEYFTEIDELFDE   75 (610)
Q Consensus         2 ~~~~~~~--~~d~~~e~~~~---~~yvPrDe~f~~~k~~~f~~~~~~~~~~~~~~~l~~~~~~~~-~f~~f~di~~ly~~   75 (610)
                      -|||||.  +|||.||||..   .|||||||+|++.|.++|.+.++|+++|.++|.|+++++.++ +|+||+||++||+ 
T Consensus       290 R~RTGR~~t~~Dp~~Esr~~~~~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~-  368 (918)
T PLN02305        290 RCRTGRPPTKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYN-  368 (918)
T ss_pred             cCcCCCCCCCCCCcccccccCCCCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhc-
Confidence            4999965  79999999964   579999999999999999999999999999999999998777 9999999999999 


Q ss_pred             CCCCCCCCc-chhhhhhhH-HHHHHHhhccccccccCchhhhhccccccceeechhhccCCCCCCccchHHHHHHHhhcC
Q 040723           76 DGFSIPPNL-NESIWNIIP-RWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARL  153 (610)
Q Consensus        76 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~W~~D~~FarQ~LaG~  153 (610)
                      +|+.+|... ..+.+..+| .+++.+.++++.+||||+|+||+                 .|+++|++|+|||||+|||+
T Consensus       369 ~g~~l~~~~~~~~~~~p~~~~~~~~i~~~~~~~lkf~~P~vi~-----------------~d~~~W~~DeeFaRQ~LaGv  431 (918)
T PLN02305        369 DGILLKTEEPKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIK-----------------RDRFAWLRDNEFARQALAGV  431 (918)
T ss_pred             cCCcCCchhhhhhhcCCchHHHHHHhhhcccccccCCCcceee-----------------cccccccChHHHHHHHHcCC
Confidence            999999853 223332133 78888888899999999999998                 89999999999999999999


Q ss_pred             CccchhhhH------------------------------------hhhcCceEEEcccccccchhhhccCCCchhhhccc
Q 040723          154 NPCSIQLIT------------------------------------AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKT  197 (610)
Q Consensus       154 NP~~I~~~~------------------------------------al~~grLfi~Dy~~~~lp~~~~~~~~~g~~~~~~~  197 (610)
                      ||++|++|+                                    ||++|||||+||||++|||+.++|.+++      +
T Consensus       432 NP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~------~  505 (918)
T PLN02305        432 NPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPE------R  505 (918)
T ss_pred             CChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCCCcHHHHHHcCCEEEEechhhhCcccccccccCC------c
Confidence            999999998                                    8899999999999999999989999888      8


Q ss_pred             ccccceeEEEeCCCCcceeEEEEecCCCCCCCCCcceeeeCCCCCCCchHHHHHHHHHHhhhhhhHHHHHhhhhccchhh
Q 040723          198 TLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVE  277 (610)
Q Consensus       198 ~~yAp~~Lffl~~~g~L~PiAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~Hqli~Hll~THlv~E  277 (610)
                      +.|||+||||++++|+|+||||||+++++++++..++||||.++++++|.|+|||+||++||+++||+++||++||++||
T Consensus       506 ~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~E  585 (918)
T PLN02305        506 KAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACME  585 (918)
T ss_pred             ccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHH
Confidence            89999999999999999999999999988776777889999876678899999999999999999999999999999999


Q ss_pred             HHHHHHhccCCcccchhhcccccchhhhcchHHHhhccccCCcccccccCCchhHHHHHHHHHhccCCCCccccchHHHh
Q 040723          278 PYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLIS  357 (610)
Q Consensus       278 pf~vAt~R~Ls~~HPv~kLL~PH~r~tl~IN~~Ar~~LI~~gG~id~~~~~g~~~~el~~~~y~~~w~f~~~~lP~dL~~  357 (610)
                      ||+|||+||||.+|||||||.||||+||+||++||++||++||++|++|++|+++++|++++|++.|+|++++||+||++
T Consensus       586 pfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~k  665 (918)
T PLN02305        586 PYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIR  665 (918)
T ss_pred             HHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999997899999999999999


Q ss_pred             cCCCCCCCCCCCCccccccCCccchhhHHHHHHHHHHHhhcccccccccccccCCHHHHHHHHHHHhhcCCCCCCCCCCC
Q 040723          358 RRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWP  437 (610)
Q Consensus       358 RG~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~~~p  437 (610)
                      |||+++|+++|||+++.|||||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++.+|||
T Consensus       666 RGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p  745 (918)
T PLN02305        666 RGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWP  745 (918)
T ss_pred             cCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCChhHHHHHHhhhhhccccccccccccccccccccCCCccccCCCCCCCCCChhHHhhhccCchHHHhccCCChHHHH
Q 040723          438 VLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQAT  517 (610)
Q Consensus       438 ~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~Pn~P~~lr~p~P~~~Kg~~~~~~~~~~~e~~~l~~LP~~~~a~  517 (610)
                      +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||++||++  +..++++|+.+||+++|++||++.||+
T Consensus       746 ~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~  823 (918)
T PLN02305        746 KLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQE--NDPDYEKFIRNPQYTFLSSLPTQLQAT  823 (918)
T ss_pred             CCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCC--CCchHHHhhhChHHHHHHHCCcHHHHH
Confidence            999999999999999999999999999999999999999999999999988  567899999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCcccccCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCccCCceeecCCC
Q 040723          518 KVMLILSLLSCHSPDEEFLGKDMEP--AWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFW  595 (610)
Q Consensus       518 ~~m~~~~~LS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~lk~r~~~~~~PY~~L~Ps~  595 (610)
                      .+|+++++||.|++||+|||++.+.  .|+.|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|++
T Consensus       824 ~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s  903 (918)
T PLN02305        824 KVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTS  903 (918)
T ss_pred             HHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCC
Confidence            9999999999999999999999875  79999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCccccC
Q 040723          596 KDGDKEKGVPYSISI  610 (610)
Q Consensus       596 ~~g~t~~~IpnSIsI  610 (610)
                      +||||||||||||||
T Consensus       904 ~~G~T~rgIPNSISI  918 (918)
T PLN02305        904 GPGVTGRGIPNSISI  918 (918)
T ss_pred             CCCCCcCCCCCcccC
Confidence            999999999999998

>PLN02264 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query610
2iuj_A853 Crystal Structure Of Soybean Lipoxygenase-B Length 1e-133
1ik3_A857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 1e-133
1rov_A857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 1e-131
2iuk_A864 Crystal Structure Of Soybean Lipoxygenase-D Length 1e-127
2sbl_B839 The Three-Dimensional Structure Of An Arachidonic A 1e-121
3pzw_A839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 1e-121
3bnd_A839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 1e-121
3bnb_A839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 1e-121
1fgr_A839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 1e-121
1fgq_A839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 1e-121
1fgm_A839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 1e-121
3bne_A839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 1e-121
1fgo_A839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 1e-121
1y4k_A839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 1e-121
1fgt_A839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 1e-120
3bnc_A839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 1e-120
3dy5_A1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 4e-41
3fg1_A696 Crystal Structure Of Delta413-417:gs Lox Length = 6 7e-41
3vf1_A698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 8e-41
3fg4_A696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 2e-40
2fnq_A699 Insights From The X-Ray Crystal Structure Of Coral 2e-40
3fg3_A696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 5e-40
3o8y_A691 Stable-5-Lipoxygenase Length = 691 2e-39
3v98_A691 S663d Stable-5-Lox Length = 691 2e-39
3v92_B691 S663a Stable-5-Lox Length = 691 2e-39
1lox_A662 Rabbit Reticulocyte 15-Lipoxygenase Length = 662 2e-38
2p0m_A662 Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy 3e-38
3rde_A573 Crystal Structure Of The Catalytic Domain Of Porcin 2e-37
3d3l_A541 The 2.6 A Crystal Structure Of The Lipoxygenase Dom 3e-36
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure 
Iteration: 1

 Score =  473 bits (1217), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/646 (41%), Positives = 373/646 (57%), Gaps = 75/646 (11%)
Query: 9   RKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDK---KFEY 65
           RK    E   D +Y+PRDEAF  +K + F +    S    +  ++   FDG+     F+ 
Sbjct: 239 RKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDN 298
Query: 66  FTEIDELFDEDGFSIPPNLNESIWNIIPRWIRK--IKETGEQYLQFETPEALHKEFNVEH 123
           F E+ +L+ E G ++P N    + NI P  I K   +  GEQ+L++  P+ +        
Sbjct: 299 FAEVRKLY-EGGVTLPTNF---LSNITPIPIIKELFRTDGEQFLKYPPPKVMQV------ 348
Query: 124 IVIRVFFTFAGDKFFWFRDEEFARQTLARLNPCSIQLI---------------------- 161
                      DK  W  DEEFAR+T+A LNP  I++I                      
Sbjct: 349 -----------DKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIIT 397
Query: 162 --------------TAIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFF 207
                          AIQ KKLFILD+HD  +PY+ K+        A  T  Y +RTIFF
Sbjct: 398 KEHLEPNLGGLTVEQAIQNKKLFILDHHDYLIPYLRKIN-------ANTTKTYATRTIFF 450
Query: 208 LNPDDTLRPVAIELTRPPMDGKPFW--RKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQL 265
           L  D TL P+AIEL++P   G+ +    +VY PS    ++++W LAKA+V+ +DA YHQ+
Sbjct: 451 LKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQI 510
Query: 266 VSHWLSTHCVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIEST 325
           +SHWL+TH VVEP+VIATNR LSV+HPIY+LL PH+R T+ IN+ ARK LVNA GIIE T
Sbjct: 511 ISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKT 570
Query: 326 FSPGKYSMELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGL 385
           F  G+YS+E+S+V Y K W F  +ALP +L+ R +A +DP +PHG++L IEDYPYA DGL
Sbjct: 571 FLWGRYSLEMSAVIY-KDWVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGL 629
Query: 386 DLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDL 445
           ++WD +K WV +YV+ YY +   ++ D ELQAWW E+  VGHGD +D+PWW  ++T ++L
Sbjct: 630 EIWDAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREEL 689
Query: 446 IETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNA 505
           +E   T+IW+ S  HAAVNFGQY Y G   NRP I+R  MP  +K +  +    + P+  
Sbjct: 690 VEASATLIWIASALHAAVNFGQYPYGGLILNRPTISRRFMP--EKGSPEYDALAKNPEKE 747
Query: 506 LLHTFPNPTQATKVMLILSLLSCHSPDEEFLG-KDMEPAWGEDPEIKVAFEEFRGRLMEL 564
            L T     +    + I+ +LS H+ DE +LG +D    W  D     AF+ F   L E+
Sbjct: 748 FLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEI 807
Query: 565 EGTINERNGDINLKNRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI 610
           E  + E+N D  L+NR G   +PY LL P  ++G   +G+P SISI
Sbjct: 808 EKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 Back     alignment and structure
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query610
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 0.0
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 0.0
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 1e-146
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 1e-145
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-144
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 1e-143
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 1e-141
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 1e-140
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 1e-140
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  548 bits (1412), Expect = 0.0
 Identities = 240/636 (37%), Positives = 347/636 (54%), Gaps = 68/636 (10%)

Query: 15  ENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDGDK---KFEYFTEIDE 71
           E + +  YVPRDE    +K        T S    +    E+ FD      +F  F ++ +
Sbjct: 232 EKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHD 291

Query: 72  LFDEDGFSIPPNLNESIWNIIPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFT 131
           L++  G  +P ++  +I  + P      +  G+  L+F  P  +                
Sbjct: 292 LYEG-GIKLPRDVISTIIPL-PVIKELYRTDGQHILKFPQPHVV---------------- 333

Query: 132 FAGDKFFWFRDEEFARQTLARLNPCSIQLIT----------------------------- 162
               +  W  DEEFAR+ +A +NPC I+ +                              
Sbjct: 334 -QVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG 392

Query: 163 -----AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLRPV 217
                A+  ++LF+LDYHD+F+PYV ++  +           Y +RTI FL  D TL+PV
Sbjct: 393 YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNS------AKTYATRTILFLREDGTLKPV 446

Query: 218 AIELTRPPMDGKPF--WRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCV 275
           AIEL+ P   G       +V  P+    +S +W LAKA+V+ +D+ YHQL+SHWL+TH  
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506

Query: 276 VEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMEL 335
           +EP+VIAT+R LSV+HPIY+LL PH+R  + INA AR+ L+NA GIIE+TF P KYS+E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566

Query: 336 SSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWV 395
           SS  Y K W F  +ALP +LI R +A +DP +PHG++L IEDYPYA DGL++W  +K WV
Sbjct: 567 SSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625

Query: 396 TDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTIIWV 455
            +YV  YY     V++D ELQ WW E    GHGD +D+PWWP L+T +DL+E    IIW+
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685

Query: 456 TSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQ 515
            S  HAAVNFGQY Y G   NRP  +R  +P++      ++      + A L T  +   
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKG--TPEYEEMINNHEKAYLRTITSKLP 743

Query: 516 ATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDI 575
               + ++ +LS H+ DE +LG+   P W  D +   AF++F  +L E+E  +  RN D 
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803

Query: 576 NLK-NRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI 610
           +L+ NR G   +PY LL P  ++G   +G+P SISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query610
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=3.1e-169  Score=1433.77  Aligned_cols=578  Identities=44%  Similarity=0.801  Sum_probs=546.5

Q ss_pred             CCCCCCC--CCCCCCCCCCCCCccCCCCCCChhhhhhhhhhhHHHHHhhhhhhhhhhcC----CCCCCCCHHHHHHHhhc
Q 040723            2 FCNTFSE--RKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFD----GDKKFEYFTEIDELFDE   75 (610)
Q Consensus         2 ~~~~~~~--~~d~~~e~~~~~~yvPrDe~f~~~k~~~f~~~~~~~~~~~~~~~l~~~~~----~~~~f~~f~di~~ly~~   75 (610)
                      -|||||.  +|||.+|||.. +||||||+|++.|.++|..+++|+++|.++|.|+++++    ...+|+||+||++||+ 
T Consensus       241 R~rtgr~~~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~-  318 (864)
T 2iuk_A          241 RVRTGRERTRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYE-  318 (864)
T ss_dssp             EECCCCCBCSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTS-
T ss_pred             cccCCCCCCCCCCCcccccc-CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHh-
Confidence            3999976  68999999975 99999999999999999999999999999999999884    3349999999999999 


Q ss_pred             CCCCCCCCcchhhhhhhH-HHHH-HHhhccccccccCchhhhhccccccceeechhhccCCCCCCccchHHHHHHHhhcC
Q 040723           76 DGFSIPPNLNESIWNIIP-RWIR-KIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARL  153 (610)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~W~~D~~FarQ~LaG~  153 (610)
                      +|+.+|..   ..++++| .+++ .+.+++++++|||+|++|+                 .++++|++|++||||+|||+
T Consensus       319 ~g~~l~~~---~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~-----------------~~~~~W~~DeeFarQ~LaG~  378 (864)
T 2iuk_A          319 GGIKLPTD---ILSQISPLPALKEIFRTDGENVLQFPPPHVAK-----------------VSKSGVMTDEEFAREVIAGV  378 (864)
T ss_dssp             SCEECCHH---HHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCS-----------------CSSSSSSCHHHHHHHHHHSS
T ss_pred             ccccCchh---hhcccCcHHHHHHHhhccccchhcCCCcceec-----------------ccchhhhchHHHHHHHhcCC
Confidence            99988872   2333323 3333 3356789999999999997                 78899999999999999999


Q ss_pred             CccchhhhH------------------------------------hhhcCceEEEcccccccchhhhccCCCchhhhccc
Q 040723          154 NPCSIQLIT------------------------------------AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKT  197 (610)
Q Consensus       154 NP~~I~~~~------------------------------------al~~grLfi~Dy~~~~lp~~~~~~~~~g~~~~~~~  197 (610)
                      ||++|++|+                                    |+++|||||+||||++|||+.++|.+++      +
T Consensus       379 NP~~I~r~~e~P~~s~ldp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~------~  452 (864)
T 2iuk_A          379 NPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPT------A  452 (864)
T ss_dssp             SCSCCEECSSSSCCCCSCHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTT------C
T ss_pred             CchhhhhhhccCCcccCChhhcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhccchhhcccCCC------c
Confidence            999999997                                    6779999999999988999999999888      8


Q ss_pred             ccccceeEEEeCCCCcceeEEEEecCCCCCCCC--CcceeeeCCCCCCCchHHHHHHHHHHhhhhhhHHHHHhhhhccch
Q 040723          198 TLYGSRTIFFLNPDDTLRPVAIELTRPPMDGKP--FWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCV  275 (610)
Q Consensus       198 ~~yAp~~Lffl~~~g~L~PiAIqL~~~~~~~~~--~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~Hqli~Hll~THlv  275 (610)
                      ++|||+||||++++|+|+||||||+++++++++  +.++||||+|+++++|.|+|||+||++||+++||+++||++||++
T Consensus       453 ~~YAp~~Lffl~~dG~L~PlAIqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv  532 (864)
T 2iuk_A          453 KAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAV  532 (864)
T ss_dssp             CCCEEEEEEEECTTSCEEEEEEEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred             eeecceEEEEEcCCCCEeEEEEEeeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHH
Confidence            899999999999999999999999998765442  579999999876678999999999999999999999999999999


Q ss_pred             hhHHHHHHhccCCcccchhhcccccchhhhcchHHHhhccccCCcccccccCCchhHHHHHHHHHhccCCCCccccchHH
Q 040723          276 VEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNL  355 (610)
Q Consensus       276 ~Epf~vAt~R~Ls~~HPv~kLL~PH~r~tl~IN~~Ar~~LI~~gG~id~~~~~g~~~~el~~~~y~~~w~f~~~~lP~dL  355 (610)
                      +|||+|||+||||.+|||||||.||||+||+||++||+.||++||++|++|++|+++++|++++|+. |+|++++||+||
T Consensus       533 ~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL  611 (864)
T 2iuk_A          533 MEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADL  611 (864)
T ss_dssp             HHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHH
T ss_pred             HHHHHHHHhccCCccCchHHhhHHHHHHHHHHHHHHHHhccCCCCceeeeccCchhHHHHHHHHHcc-CCCccccCcHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999997 999999999999


Q ss_pred             HhcCCCCCCCCCCCCccccccCCccchhhHHHHHHHHHHHhhcccccccccccccCCHHHHHHHHHHHhhcCCCCCCCCC
Q 040723          356 ISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPW  435 (610)
Q Consensus       356 ~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~~  435 (610)
                      ++|||+++|++++||+++.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|
T Consensus       612 ~~RGva~~D~~~p~gl~l~ipdYpYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~  691 (864)
T 2iuk_A          612 VKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPW  691 (864)
T ss_dssp             HHTTSEEECSSSTTSEEESSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTT
T ss_pred             HhcCCCCCCccccccccccCCCCCccccHHHHHHHHHHHHHHHHHHHcCCchhhcCCHHHHHHHHHHHhcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCChhHHHHHHhhhhhccccccccccccccccccccCCCccccCCCCCCCCCChhHHhhhccCchHHHhccCCChHH
Q 040723          436 WPVLKTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQ  515 (610)
Q Consensus       436 ~p~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~Pn~P~~lr~p~P~~~Kg~~~~~~~~~~~e~~~l~~LP~~~~  515 (610)
                      ||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+  ||..++++++.+||+++|++||++.|
T Consensus       692 ~P~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r~p~P~--~G~~~~~~l~~~pe~~~L~tLP~~~q  769 (864)
T 2iuk_A          692 WPKKQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPA--EGTPEYDEMVKNPQKAYLRTITPKFE  769 (864)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCCCCCSCCCC--TTSHHHHHHHHCHHHHHHTTSCCHHH
T ss_pred             CCCcCCHHHHHHHhheeeecccchhhhhccccchhhcccCCCChhhcCCCCC--CCchhHhhhhhChHHHHHHhCCCHHH
Confidence            9999999999999999999999999999999999999999999999999995  49999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCccCCceeecCCC
Q 040723          516 ATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLKNRNGAGVVPYNLLKPFW  595 (610)
Q Consensus       516 a~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~lk~r~~~~~~PY~~L~Ps~  595 (610)
                      |+.+|+++++||+|++||+|||+|+++.|++|+++++|+++|+++|++||++|++||++++||||+|++++||+||+|++
T Consensus       770 a~~~m~l~~lLS~h~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s  849 (864)
T 2iuk_A          770 TLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSS  849 (864)
T ss_dssp             HHHHHHHHHHHTCCCSSCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCC
T ss_pred             HHHHHHHHHHHhcCCCCcccccccCccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCC
Confidence            99999999999999999999999998899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCccccC
Q 040723          596 KDGDKEKGVPYSISI  610 (610)
Q Consensus       596 ~~g~t~~~IpnSIsI  610 (610)
                      +||||||||||||||
T Consensus       850 ~~g~t~~~IPNSIsI  864 (864)
T 2iuk_A          850 EEGLTFKGIPNSISI  864 (864)
T ss_dssp             CSSSCSCCCBSSCCC
T ss_pred             CCCcccCCCCCcccC
Confidence            999999999999998
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 610
d3bnea1690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 0.0
d2p0ma1551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 1e-163
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  633 bits (1635), Expect = 0.0
 Identities = 246/638 (38%), Positives = 350/638 (54%), Gaps = 72/638 (11%)

Query: 15  ENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFDG---DKKFEYFTEIDE 71
           E + +  YVPRDE    +K        T S    +    E+ FD      +F  F ++ +
Sbjct: 83  EKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHD 142

Query: 72  LFDEDGFSIPPNLNESIWNIIPRWIRK--IKETGEQYLQFETPEALHKEFNVEHIVIRVF 129
           L+ E G  +P    + I  IIP  + K   +  G+  L+F  P            V++V 
Sbjct: 143 LY-EGGIKLP---RDVISTIIPLPVIKELYRTDGQHILKFPQPH-----------VVQV- 186

Query: 130 FTFAGDKFFWFRDEEFARQTLARLNPCSIQLIT--------------------------- 162
                 +  W  DEEFAR+ +A +NPC I+ +                            
Sbjct: 187 -----SQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDL 241

Query: 163 -------AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYGSRTIFFLNPDDTLR 215
                  A+  ++LF+LDYHD+F+PYV ++  +           Y +RTI FL  D TL+
Sbjct: 242 DGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNS------AKTYATRTILFLREDGTLK 295

Query: 216 PVAIELTRPPMDG--KPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTH 273
           PVAIEL+ P   G       +V  P+    +S +W LAKA+V+ +D+ YHQL+SHWL+TH
Sbjct: 296 PVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTH 355

Query: 274 CVVEPYVIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSM 333
             +EP+VIAT+R LSV+HPIY+LL PH+R  + INA AR+ L+NA GI E+TF P KYS+
Sbjct: 356 AAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSV 415

Query: 334 ELSSVAYDKQWRFDHEALPKNLISRRMAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKK 393
           E+SS  Y K W F  +ALP +LI R +A +DP +PHG++L IEDYPYA DGL++W  +K 
Sbjct: 416 EMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 474

Query: 394 WVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVLKTPQDLIETITTII 453
           WV +YV  YY     V++D ELQ WW E    GHGD +D+PWWP L+T +DL+E    II
Sbjct: 475 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 534

Query: 454 WVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNP 513
           W+ S  HAAVNFGQY Y G   NRP  +R  +P  +K    ++      + A L T  + 
Sbjct: 535 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSK 592

Query: 514 TQATKVMLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNG 573
                 + ++ +LS H+ DE +LG+   P W  D +   AF++F  +L E+E  +  RN 
Sbjct: 593 LPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNN 652

Query: 574 DINLK-NRNGAGVVPYNLLKPFWKDGDKEKGVPYSISI 610
           D +L+ NR G   +PY LL P  ++G   +G+P SISI
Sbjct: 653 DPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query610
d3bnea1690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=1.6e-170  Score=1426.05  Aligned_cols=580  Identities=41%  Similarity=0.772  Sum_probs=551.8

Q ss_pred             CCCCCCC--CCCCCCCCCCCCCccCCCCCCChhhhhhhhhhhHHHHHhhhhhhhhhhcC--CCC-CCCCHHHHHHHhhcC
Q 040723            2 FCNTFSE--RKPIGDENRADDIYVPRDEAFSDIKLAAFDSKKTYSFVSTLPTLIETKFD--GDK-KFEYFTEIDELFDED   76 (610)
Q Consensus         2 ~~~~~~~--~~d~~~e~~~~~~yvPrDe~f~~~k~~~f~~~~~~~~~~~~~~~l~~~~~--~~~-~f~~f~di~~ly~~~   76 (610)
                      -|||||.  +|||.+|||..++||||||+|++.|.++|.++++|+++|.++|.|+++++  ... +|+||+||++||+ +
T Consensus        68 r~rtgr~~~~~dp~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~-~  146 (690)
T d3bnea1          68 RGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYE-G  146 (690)
T ss_dssp             EECCCCCBCSSCTTSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGT-T
T ss_pred             CCCCCCCCCCCCCCcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh-c
Confidence            3999986  78999999999999999999999999999999999999999999999875  233 8999999999999 9


Q ss_pred             CCCCCCCcchhhhhh-hHHHHHHHhhccccccccCchhhhhccccccceeechhhccCCCCCCccchHHHHHHHhhcCCc
Q 040723           77 GFSIPPNLNESIWNI-IPRWIRKIKETGEQYLQFETPEALHKEFNVEHIVIRVFFTFAGDKFFWFRDEEFARQTLARLNP  155 (610)
Q Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~W~~D~~FarQ~LaG~NP  155 (610)
                      |+.+|...  +.+.+ ++.+.+.+..+++.++|||+|+||+                 .++++|++|++||||+|||+||
T Consensus       147 g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~-----------------~~~~~W~~D~eFarQ~LaG~NP  207 (690)
T d3bnea1         147 GIKLPRDV--ISTIIPLPVIKELYRTDGQHILKFPQPHVVQ-----------------VSQSAWMTDEEFAREMIAGVNP  207 (690)
T ss_dssp             CEECCHHH--HHHHTTSTTGGGGCEECSSSEEECCCCGGGS-----------------SCSSGGGSHHHHHHHHHHSSST
T ss_pred             cccCchhh--hhhcccHHHHHHHhhccccceeecCCchhhh-----------------ccccccccHHHHHHHHhcCCCc
Confidence            99888532  22222 4566677778899999999999998                 8999999999999999999999


Q ss_pred             cchhhhH----------------------------------hhhcCceEEEcccccccchhhhccCCCchhhhccccccc
Q 040723          156 CSIQLIT----------------------------------AIQQKKLFILDYHDLFLPYVEKVRHIEDEDEALKTTLYG  201 (610)
Q Consensus       156 ~~I~~~~----------------------------------al~~grLfi~Dy~~~~lp~~~~~~~~~g~~~~~~~~~yA  201 (610)
                      ++|++|+                                  ||++|||||+|||++++|++.+++...+      ++.||
T Consensus       208 ~~Irr~~e~P~~~~l~~~~~g~~~s~it~~~i~l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~------~~~~A  281 (690)
T d3bnea1         208 CVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNS------AKTYA  281 (690)
T ss_dssp             TCCEECCSSSCCCCSCHHHHCCCCCCCCGGGCCCTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTT------CCCCE
T ss_pred             hheeeccccCCcCCCCHHHhCchhhhhhHhhhccCccHHHHHHHcCCEEEEechhhhccccccccCcCC------ceeec
Confidence            9999998                                  7889999999999999999999998877      89999


Q ss_pred             ceeEEEeCCCCcceeEEEEecCCCCCC--CCCcceeeeCCCCCCCchHHHHHHHHHHhhhhhhHHHHHhhhhccchhhHH
Q 040723          202 SRTIFFLNPDDTLRPVAIELTRPPMDG--KPFWRKVYTPSWNSTDSWLWRLAKAHVLAHDAGYHQLVSHWLSTHCVVEPY  279 (610)
Q Consensus       202 p~~Lffl~~~g~L~PiAIqL~~~~~~~--~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~Hqli~Hll~THlv~Epf  279 (610)
                      |+||||++++|+|+||||||++++..+  .++.++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||
T Consensus       282 ~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf  361 (690)
T d3bnea1         282 TRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPF  361 (690)
T ss_dssp             EEEEEEECTTSCEEEEEEEEECCCCTTCCCCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHH
T ss_pred             chhheeECCCCCcccEEEEecCCCCCcccCCCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHH
Confidence            999999999999999999999987543  256799999998766689999999999999999999999999999999999


Q ss_pred             HHHHhccCCcccchhhcccccchhhhcchHHHhhccccCCcccccccCCchhHHHHHHHHHhccCCCCccccchHHHhcC
Q 040723          280 VIATNRQLSVIHPIYRLLHPHFRYTVEINAFARKDLVNAGGIIESTFSPGKYSMELSSVAYDKQWRFDHEALPKNLISRR  359 (610)
Q Consensus       280 ~vAt~R~Ls~~HPv~kLL~PH~r~tl~IN~~Ar~~LI~~gG~id~~~~~g~~~~el~~~~y~~~w~f~~~~lP~dL~~RG  359 (610)
                      ||||+||||.+|||||||.||||+||+||++||.+||++||++++++++|+++++|++++|++ |+|++++||+||++||
T Consensus       362 ~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~~~~~~el~~~ayk~-w~f~~~~lP~dL~~RG  440 (690)
T d3bnea1         362 VIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRG  440 (690)
T ss_dssp             HHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTT
T ss_pred             HHHHHhcCCccCCHHHhcchhhhhhHHHHHHHHHhccCCCCeeeecccCchhHHHHHHHHHhc-CcccccCCHHHHHHcC
Confidence            999999999999999999999999999999999999999999999999999999999999998 9999999999999999


Q ss_pred             CCCCCCCCCCCccccccCCccchhhHHHHHHHHHHHhhcccccccccccccCCHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 040723          360 MAAEDPCSPHGLKLTIEDYPYAKDGLDLWDILKKWVTDYVNHYYPNQSLVESDEELQAWWTEIRTVGHGDKEDEPWWPVL  439 (610)
Q Consensus       360 ~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~~~p~i  439 (610)
                      |+++|++++||+++.|||||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|
T Consensus       441 v~~~d~~~p~g~~l~ipdYPYrdDgL~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l  520 (690)
T d3bnea1         441 VAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKL  520 (690)
T ss_dssp             SEEECTTSTTSEEESSSSCHHHHHHHHHHHHHHHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCC
T ss_pred             CCcccccccccccccCCCCchhhhHHHHHHHHHHHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHhhhhhccccccccccccccccccccCCCccccCCCCCCCCCChhHHhhhccCchHHHhccCCChHHHHHH
Q 040723          440 KTPQDLIETITTIIWVTSGQHAAVNFGQYTYAGYFPNRPAITRLNMPDEDKSNEIWKIFNEKPDNALLHTFPNPTQATKV  519 (610)
Q Consensus       440 ~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~Pn~P~~lr~p~P~~~Kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~  519 (610)
                      +|+++||++||+|||+||+||||||||||+|+||+||+|++||+++|++  |..++++++.+|++++|++||++.||+.+
T Consensus       521 ~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~r~~~P~~--~~~~~~~~~~~~e~~~L~tLP~~~qa~~~  598 (690)
T d3bnea1         521 QTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEK--GTPEYEEMINNHEKAYLRTITSKLPTLIS  598 (690)
T ss_dssp             CSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSTTTSCCCBCCCCCCT--TSHHHHHHHHCHHHHHHHHBCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhccHHHhhhccccccccCcCCCCChHhcCCCCCC--CChhhhhhhhchHHHHHHhCCcHHHHHHH
Confidence            9999999999999999999999999999999999999999999999987  77889999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc-ccCCCccCCceeecCCCCCC
Q 040723          520 MLILSLLSCHSPDEEFLGKDMEPAWGEDPEIKVAFEEFRGRLMELEGTINERNGDINLK-NRNGAGVVPYNLLKPFWKDG  598 (610)
Q Consensus       520 m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~lk-~r~~~~~~PY~~L~Ps~~~g  598 (610)
                      |+++++||.|++||+|||+|+++.|++|+++++|+++|+++|++||++|++||+++++| ||+|++++||+||+|+++||
T Consensus       599 ~~~~~~LS~~~~de~yLG~~~~~~~~~D~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g  678 (690)
T d3bnea1         599 LSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEG  678 (690)
T ss_dssp             HHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSB
T ss_pred             HHHHHHhccCCCCcccCCCCCCcccccChHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCCC
Confidence            99999999999999999999988999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CccCCCCccccC
Q 040723          599 DKEKGVPYSISI  610 (610)
Q Consensus       599 ~t~~~IpnSIsI  610 (610)
                      ||||||||||||
T Consensus       679 ~t~~gIPnSIsI  690 (690)
T d3bnea1         679 LTFRGIPNSISI  690 (690)
T ss_dssp             SCSCCCBSSCCC
T ss_pred             cCcCCCCCcccC
Confidence            999999999998
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure