Citrus Sinensis ID: 040740

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------
QPRSRATRQALKSILTRSLQTVAKVAKPKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAGNKEVVPRF
ccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHcccccccccccccccEEEEccccEEEEEEEEcccHHHHccccccHHHHcccccccccccccccccccEEEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccc
ccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccEEEccccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHcccHcHHcccEEEEccccEEEEEEEccccEHHHHcccccccHHHHcccccccccccccccccEEEEEEEEEccccEEEEEEEcccHccHHHHHHHHHHHHHHHccccccccccc
QPRSRATRQALKSILTRSLQTVAKVAKPKMEKALEVLVRAREsikpayptpehLRNFKLSLMDQITFPAYVSTIFLYkadgnvkadqISQCLKSSLsktltkfyplagrvkddfsieCNDEGAEYVEALANGFLfeylqkpdqnllrdfhpfnyaespvasnggpmmRIQATFFKCGglaitvctchklidgvsLGIFVNSwtttaragnkevvprf
qprsratrqalksiltrslqtvakvakpkmEKALEVLVRAresikpayptpehLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNswtttaragnkevvprf
QPRSRATRQALKSILTRSLQTVAKVAKPKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAGNKEVVPRF
********************************ALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTA***********
*************I*************************ARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGN*****ISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAGN**V*PRF
**********LKSILTRSLQTVAKVAKPKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAGNKEVVPRF
***********K*ILTRSLQTVAKVAKPKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAGNKEV****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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QPRSRATRQALKSILTRSLQTVAKVAKPKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAGNKEVVPRF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query217 2.2.26 [Sep-21-2011]
Q70PR7 421 Vinorine synthase OS=Rauv N/A no 0.829 0.427 0.388 3e-29
Q94FT4 474 Salutaridinol 7-O-acetylt N/A no 0.811 0.371 0.356 6e-26
Q9FI40 443 BAHD acyltransferase At5g no no 0.834 0.408 0.430 6e-26
Q9ZTK5 439 Deacetylvindoline O-acety N/A no 0.788 0.389 0.310 2e-19
O64470 451 Spermidine hydroxycinnamo no no 0.811 0.390 0.298 2e-18
O24645 445 Anthranilate N-benzoyltra N/A no 0.783 0.382 0.310 4e-15
Q94CD1 457 Omega-hydroxypalmitate O- no no 0.764 0.363 0.336 4e-15
O23917 446 Anthranilate N-benzoyltra N/A no 0.783 0.381 0.310 7e-15
Q9FI78 433 Shikimate O-hydroxycinnam no no 0.815 0.408 0.284 2e-14
O23918 445 Anthranilate N-benzoyltra N/A no 0.783 0.382 0.305 2e-14
>sp|Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2 Back     alignment and function desciption
 Score =  128 bits (321), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 107/198 (54%), Gaps = 18/198 (9%)

Query: 28  PKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYK--ADGNVKA 85
           P+MEK  E      E I P+ PTP+ L+ +K+S +DQ+    ++  I  Y    D N+  
Sbjct: 3   PQMEKVSE------ELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDP 56

Query: 86  DQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQ------ 139
            Q SQ LK SLSK LT FYPLAGR+  + S++CND G  +VEA     L + +Q      
Sbjct: 57  AQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELE 116

Query: 140 KPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFV 199
           K DQ L    +P    E     N    + ++ +FF+CGG AI V   HK+ D +SL  F+
Sbjct: 117 KLDQYLPSAAYPGGKIE----VNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFL 172

Query: 200 NSWTTTARAGNKEVVPRF 217
           N+WT T R   + V+P F
Sbjct: 173 NAWTATCRGETEIVLPNF 190
Acetyltransferase that catalyzes the formation of vinorine, a precursor of the antiarrhythmic monoterpenoid indole alkaloid ajmaline. Acts on gardneral, but not on polyneuridine aldehyde or N-methylgardneral.
Rauvolfia serpentina (taxid: 4060)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6EC: 0
>sp|Q94FT4|SALAT_PAPSO Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1 Back     alignment and function description
>sp|Q9FI40|BAHD1_ARATH BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZTK5|DAT_CATRO Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1 Back     alignment and function description
>sp|O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana GN=SHT PE=1 SV=1 Back     alignment and function description
>sp|O24645|HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 OS=Dianthus caryophyllus GN=HCBT1 PE=1 SV=1 Back     alignment and function description
>sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1 Back     alignment and function description
>sp|O23917|HCBT2_DIACA Anthranilate N-benzoyltransferase protein 2 OS=Dianthus caryophyllus GN=HCBT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9FI78|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1 Back     alignment and function description
>sp|O23918|HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 OS=Dianthus caryophyllus GN=HCBT3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
255540359 445 Anthranilate N-benzoyltransferase protei 0.852 0.415 0.439 1e-37
255547850 441 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr 0.792 0.390 0.454 2e-37
224104303 346 predicted protein [Populus trichocarpa] 0.843 0.528 0.426 4e-37
224100077 439 predicted protein [Populus trichocarpa] 0.838 0.414 0.446 1e-36
449469643 434 PREDICTED: BAHD acyltransferase At5g4798 0.838 0.419 0.421 2e-36
449515991 434 PREDICTED: BAHD acyltransferase At5g4798 0.838 0.419 0.421 2e-36
255539202295 Salutaridinol 7-O-acetyltransferase, put 0.820 0.603 0.419 3e-36
224107651 441 predicted protein [Populus trichocarpa] 0.843 0.414 0.431 4e-36
224061883 449 predicted protein [Populus trichocarpa] 0.829 0.400 0.405 8e-36
225425912 431 PREDICTED: vinorine synthase [Vitis vini 0.834 0.419 0.436 1e-35
>gi|255540359|ref|XP_002511244.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223550359|gb|EEF51846.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/189 (43%), Positives = 119/189 (62%), Gaps = 4/189 (2%)

Query: 32  KALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGN---VKADQI 88
            ++ VLV +RE+IKP+ PTP+ L+ FKLSL+DQ++  AYV  I  Y ++     VK  + 
Sbjct: 2   NSVNVLVTSRETIKPSSPTPQTLKCFKLSLLDQLSPAAYVPMIIYYASNSELDEVKNQER 61

Query: 89  SQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRD 148
              LK SLS+TLT+FYPLAGRVK++  IECND+G ++ EA  N  L E L++P+ ++L  
Sbjct: 62  LDLLKKSLSRTLTQFYPLAGRVKENLFIECNDQGVDFFEARVNCPLSEILRRPEADVLNQ 121

Query: 149 FHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARA 208
           F P  Y   P AS+    + IQ   F CGG+AI     HKL+DG++   F+N+W + AR 
Sbjct: 122 FLPHEY-HVPAASSMEFQVAIQVNTFTCGGIAIGTSISHKLVDGITFTCFMNNWASIARG 180

Query: 209 GNKEVVPRF 217
            ++   P F
Sbjct: 181 SDEHSPPVF 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255547850|ref|XP_002514982.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223546033|gb|EEF47536.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224104303|ref|XP_002333962.1| predicted protein [Populus trichocarpa] gi|222839277|gb|EEE77614.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224100077|ref|XP_002311734.1| predicted protein [Populus trichocarpa] gi|222851554|gb|EEE89101.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449469643|ref|XP_004152528.1| PREDICTED: BAHD acyltransferase At5g47980-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449515991|ref|XP_004165031.1| PREDICTED: BAHD acyltransferase At5g47980-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255539202|ref|XP_002510666.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] gi|223551367|gb|EEF52853.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224107651|ref|XP_002314550.1| predicted protein [Populus trichocarpa] gi|222863590|gb|EEF00721.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224061883|ref|XP_002300646.1| predicted protein [Populus trichocarpa] gi|222842372|gb|EEE79919.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225425912|ref|XP_002267341.1| PREDICTED: vinorine synthase [Vitis vinifera] gi|297738335|emb|CBI27536.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
TAIR|locus:2102936 443 AT3G30280 [Arabidopsis thalian 0.838 0.410 0.394 1.2e-33
TAIR|locus:2092090 442 AT3G26040 [Arabidopsis thalian 0.820 0.402 0.397 2e-33
TAIR|locus:2130065 446 AT4G15390 [Arabidopsis thalian 0.811 0.394 0.402 4.1e-33
TAIR|locus:2024061 436 AT1G24420 [Arabidopsis thalian 0.843 0.419 0.421 1.4e-32
TAIR|locus:2152783 426 AT5G47950 [Arabidopsis thalian 0.806 0.410 0.395 2.7e-29
TAIR|locus:2178667 428 AT5G23970 [Arabidopsis thalian 0.792 0.401 0.422 7.1e-29
TAIR|locus:2024036 435 AT1G24430 [Arabidopsis thalian 0.820 0.409 0.388 2.2e-27
TAIR|locus:2152763 443 AT5G47980 [Arabidopsis thalian 0.829 0.406 0.432 9.6e-27
TAIR|locus:2130075 435 BIA1 "BRASSINOSTEROID INACTIVA 0.820 0.409 0.408 7.3e-26
TAIR|locus:2059109 451 SHT "spermidine hydroxycinnamo 0.806 0.388 0.308 2.2e-18
TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 73/185 (39%), Positives = 111/185 (60%)

Query:    32 KALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQC 91
             + ++V   A+E IKP+  TP  L+  +LS+ D I  P Y      Y  D  +  +Q S  
Sbjct:     2 ETMKVETIAKEIIKPSSTTPNDLQTLQLSIYDHILPPVYTVAFLFYTKDDLISPEQSSHK 61

Query:    92 LKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGF-LFEYLQKPDQNLLRDFH 150
             LK+SL++TLTKFYPLAGR+K   +I+CNDEGA +V+A  N + L ++L+ PD   L+   
Sbjct:    62 LKTSLAETLTKFYPLAGRIKG-VTIDCNDEGAVFVDARVNNYPLSDFLRSPDFKTLQQLL 120

Query:   151 PFNYAESPV-ASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARAG 209
             P +  + P  A+   P++ ++AT+F CGG+AI +C  HK+ D  S+  F+ SW   AR  
Sbjct:   121 PLDVIDDPYEAATTWPLLLVKATYFPCGGMAIGLCITHKIADATSISTFIQSWAAMARGE 180

Query:   210 NKEVV 214
               ++V
Sbjct:   181 AGDIV 185
GO:0005737 "cytoplasm" evidence=ISM
GO:0016740 "transferase activity" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059109 SHT "spermidine hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_887000001
hypothetical protein (346 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
PLN00140 444 PLN00140, PLN00140, alcohol acetyltransferase fami 6e-48
pfam02458 432 pfam02458, Transferase, Transferase family 9e-44
PLN02481 436 PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul 1e-26
PLN03157 447 PLN03157, PLN03157, spermidine hydroxycinnamoyl tr 1e-25
PLN02663 431 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate 1e-17
>gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
 Score =  162 bits (412), Expect = 6e-48
 Identities = 77/186 (41%), Positives = 107/186 (57%), Gaps = 8/186 (4%)

Query: 34  LEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGN--VKADQISQC 91
           +EV + +RE IKP+ P+  HL+ FKLSL+DQ+T   Y+  IF Y  + N   K  QIS  
Sbjct: 1   MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQ 60

Query: 92  LKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDF-- 149
           LK SLS+TL+ FYP +GRVKD+  I+  +EG  + E    G L ++L+ P   LL  F  
Sbjct: 61  LKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLP 120

Query: 150 -HPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARA 208
             PF+Y   P A    P + IQ   F CGG+A+ +C  HK+ID  +   F++SW    R 
Sbjct: 121 CQPFSYESDPEAI---PQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRG 177

Query: 209 GNKEVV 214
              EV+
Sbjct: 178 HYSEVI 183

Length = 444
>gnl|CDD|217048 pfam02458, Transferase, Transferase family Back     alignment and domain information
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 217
PLN00140 444 alcohol acetyltransferase family protein; Provisio 100.0
PLN03157 447 spermidine hydroxycinnamoyl transferase; Provision 100.0
PF02458 432 Transferase: Transferase family; InterPro: IPR0034 100.0
PLN02663 431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 100.0
PLN02481 436 Omega-hydroxypalmitate O-feruloyl transferase 100.0
PF03007263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 97.7
PRK09294 416 acyltransferase PapA5; Provisional 97.47
PF00668 301 Condensation: Condensation domain; InterPro: IPR00 97.17
TIGR02946 446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 97.13
COG4908 439 Uncharacterized protein containing a NRPS condensa 96.71
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 95.18
PRK12467 3956 peptide synthase; Provisional 94.66
PRK05691 4334 peptide synthase; Validated 93.75
PF07247 480 AATase: Alcohol acetyltransferase; InterPro: IPR01 92.91
PRK12316 5163 peptide synthase; Provisional 92.35
PRK12467 3956 peptide synthase; Provisional 92.34
PRK12316 5163 peptide synthase; Provisional 92.03
PRK05691 4334 peptide synthase; Validated 91.72
PRK13757219 chloramphenicol acetyltransferase; Provisional 81.8
>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.5e-43  Score=318.36  Aligned_cols=184  Identities=39%  Similarity=0.693  Sum_probs=157.5

Q ss_pred             eeEEEEeeeEEeCCCCCCCCcceeeCCcccccccCcceEEEEEEecCCCC--ChhhHHHHHHHHHHHHhhhhccCCceec
Q 040740           34 LEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNV--KADQISQCLKSSLSKTLTKFYPLAGRVK  111 (217)
Q Consensus        34 ~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~y~~~~~~F~~~~~~--~~~~~~~~Lk~sLs~~L~~~p~LAGRl~  111 (217)
                      |+|++.++++|+|+.|||.+.+.++||+||+.+++.|++.+|||+.+.+.  +....+++||+||+++|++||||||||+
T Consensus         1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~   80 (444)
T PLN00140          1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVK   80 (444)
T ss_pred             CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCcccc
Confidence            57999999999999999987678999999998878999999999976432  2236789999999999999999999999


Q ss_pred             CceEEEeCCCCcEEEEeecccChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccc
Q 040740          112 DDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLID  191 (217)
Q Consensus       112 ~~~~I~c~~~Gv~f~~a~~d~sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~D  191 (217)
                      ++++|+||++||.|+||+++.+++|+...++...+..|+|..+.....+..+.|++++|||+|+|||++||+++||+++|
T Consensus        81 ~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~D  160 (444)
T PLN00140         81 DNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIID  160 (444)
T ss_pred             CCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEccc
Confidence            99999999999999999999999999776655566788886532111113457999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhccCCC-CCCCCC
Q 040740          192 GVSLGIFVNSWTTTARAGNK-EVVPRF  217 (217)
Q Consensus       192 g~g~~~Fl~~WA~~~rg~~~-~~~P~f  217 (217)
                      |.|+++||++||++|||.+. ...|.|
T Consensus       161 g~s~~~Fl~~WA~~~rg~~~~~~~P~~  187 (444)
T PLN00140        161 AATASAFLDSWAANTRGHYSEVINPDL  187 (444)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCccc
Confidence            99999999999999999763 455654

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK13757 chloramphenicol acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
2bgh_A 421 Crystal Structure Of Vinorine Synthase Length = 421 3e-30
4g0b_A 436 Structure Of Native Hct From Coffea Canephora Lengt 3e-19
4g2m_A 439 Structure Of A Lys-Hct Mutant From Coffea Canephora 7e-19
4g22_A 439 Structure Of A Lys-Hct Mutant From Coffea Canephora 1e-17
2e1v_A 454 Crystal Structure Of Dendranthema Morifolium Dmat, 7e-06
2e1t_A 454 Crystal Structure Of Dendranthema Morifolium Dmat C 7e-06
2xr7_A 453 Crystal Structure Of Nicotiana Tabacum Malonyltrans 2e-04
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 Back     alignment and structure 
Iteration: 1

 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 107/198 (54%), Gaps = 18/198 (9%)
Query: 28  PKMEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYK--ADGNVKA 85
           P+MEK  E      E I P+ PTP+ L+ +K+S +DQ+    ++  I  Y    D N+  
Sbjct: 3   PQMEKVSE------ELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDP 56
Query: 86  DQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQ------ 139
            Q SQ LK SLSK LT FYPLAGR+  + S++CND G  +VEA     L + +Q      
Sbjct: 57  AQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELE 116
Query: 140 KPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFV 199
           K DQ L    +P    E     N    + ++ +FF+CGG AI V   HK+ D +SL  F+
Sbjct: 117 KLDQYLPSAAYPGGKIE----VNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFL 172
Query: 200 NSWTTTARAGNKEVVPRF 217
           N+WT T R   + V+P F
Sbjct: 173 NAWTATCRGETEIVLPNF 190
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 Back     alignment and structure
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 Back     alignment and structure
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 Back     alignment and structure
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 Back     alignment and structure
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 Back     alignment and structure
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 1e-59
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 9e-55
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 3e-43
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 2e-42
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 9e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 Back     alignment and structure
 Score =  191 bits (488), Expect = 1e-59
 Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)

Query: 33  ALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKA--DGNVKADQISQ 90
           A ++   + E I P+ PTP+ L+ +K+S +DQ+    ++  I  Y    D N+   Q SQ
Sbjct: 2   APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQ 61

Query: 91  CLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQK-PDQNLLRDF 149
            LK SLSK LT FYPLAGR+  + S++CND G  +VEA     L + +Q   +   L  +
Sbjct: 62  HLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQY 121

Query: 150 HPFN-YAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARA 208
            P   Y    +  N    + ++ +FF+CGG AI V   HK+ D +SL  F+N+WT T R 
Sbjct: 122 LPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRG 181

Query: 209 GNKEVVPRF 217
             + V+P F
Sbjct: 182 ETEIVLPNF 190
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query217
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 100.0
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 100.0
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 100.0
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 100.0
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 99.96
1q9j_A 422 PAPA5, polyketide synthase associated protein 5; c 98.02
4hvm_A 493 Tlmii; PSI-biology, midwest center for structural 97.33
1l5a_A 436 Amide synthase, VIBH; nonribosomal peptide synthet 97.17
2jgp_A 520 Tyrocidine synthetase 3; multifunctional enzyme, a 97.09
2xhg_A 466 Tyrocidine synthetase A; isomerase, nonribosomal p 95.87
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 95.38
3cla_A213 Type III chloramphenicol acetyltransferase; transf 85.65
2i9d_A217 Chloramphenicol acetyltransferase; structural geno 84.99
1q23_A219 Chloramphenicol acetyltransferase; CAT I, trimer, 84.66
3b8k_A239 PDCE2;, dihydrolipoyllysine-residue acetyltransfer 84.41
3rqc_A224 Probable lipoamide acyltransferase; alpha beta fol 84.1
1dpb_A243 Dihydrolipoyl-transacetylase; dihydrolipoamide ace 83.59
1scz_A233 E2, dihydrolipoamide succinyltransferase; COA-depe 83.48
3fot_A 519 15-O-acetyltransferase; fusarium head blight, tric 82.56
2ii3_A262 Lipoamide acyltransferase component of branched-C 82.5
3mae_A256 2-oxoisovalerate dehydrogenase E2 component, dihyd 81.66
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
Probab=100.00  E-value=2.7e-42  Score=312.98  Aligned_cols=182  Identities=31%  Similarity=0.502  Sum_probs=154.6

Q ss_pred             ccCceeEEEEeeeEEeCCCCCCCCcceeeCCcccccccCcceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCce
Q 040740           30 MEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGR  109 (217)
Q Consensus        30 m~~~~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGR  109 (217)
                      |.+ |+|++.++++|+|+.|||.  +.++||+||+.+.+.|++.+|||+.+.. +....+++||+||+++|++|||||||
T Consensus         3 m~~-~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGR   78 (439)
T 4g22_A            3 MGS-MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGR   78 (439)
T ss_dssp             ----CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCE
T ss_pred             CCc-eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhcccccee
Confidence            444 8999999999999999975  4699999999987899999999997543 23356899999999999999999999


Q ss_pred             ec----CceEEEeCCCCcEEEEeecccChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecc
Q 040740          110 VK----DDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCT  185 (217)
Q Consensus       110 l~----~~~~I~c~~~Gv~f~~a~~d~sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~  185 (217)
                      |+    ++++|+||++||.|++|++|.+++|+........++.|+|..+.  ..+..+.|++.+|+|+|+|||++||+++
T Consensus        79 l~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~--~~~~~~~pll~vQvT~f~cGG~~lg~~~  156 (439)
T 4g22_A           79 LKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDY--SQGISSYALLVLQVTYFKCGGVSLGVGM  156 (439)
T ss_dssp             EEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCT--TSCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred             eeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCc--ccccccCceeEEEEEEecCCCEEEEEEe
Confidence            98    47999999999999999999999999763222356778886543  1224568999999999999999999999


Q ss_pred             cccccchhhHHHHHHHHHHHhccCCCCCCCCC
Q 040740          186 CHKLIDGVSLGIFVNSWTTTARAGNKEVVPRF  217 (217)
Q Consensus       186 ~H~v~Dg~g~~~Fl~~WA~~~rg~~~~~~P~f  217 (217)
                      ||.++||.|+++|+++||++|||.+...+|+|
T Consensus       157 ~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~  188 (439)
T 4g22_A          157 RHHAADGFSGLHFINSWSDMARGLDVTLPPFI  188 (439)
T ss_dssp             CTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBC
T ss_pred             eeccCcHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence            99999999999999999999999876666764
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* Back     alignment and structure
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* Back     alignment and structure
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} Back     alignment and structure
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A Back     alignment and structure
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A Back     alignment and structure
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* Back     alignment and structure
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* Back     alignment and structure
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query217
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 97.98
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.83
d1q23a_214 Chloramphenicol acetyltransferase, CAT {Escherichi 87.86
d3claa_213 Chloramphenicol acetyltransferase, CAT {Escherichi 87.38
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.98  E-value=1.9e-05  Score=59.71  Aligned_cols=131  Identities=14%  Similarity=0.142  Sum_probs=72.9

Q ss_pred             eeCCccccccc--CcceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceecCceEEEeCCCCcEEEEeeccc--
Q 040740           57 FKLSLMDQITF--PAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKDDFSIECNDEGAEYVEALANG--  132 (217)
Q Consensus        57 ~~LS~lD~~~~--~~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~~~~~I~c~~~Gv~f~~a~~d~--  132 (217)
                      -.|+..++...  ..++...+-++.+      ..+++|++++..++.++|.|-.+++.      .+.|....+.....  
T Consensus         8 r~l~~~e~~~~~~~~~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~------~~~~~~~~~~~~~~~~   75 (175)
T d1q9ja1           8 RKLSHSEEVFAQYEVFTSMTIQLRGV------IDVDALSDAFDALLETHPVLASHLEQ------SSDGGWNLVADDLLHS   75 (175)
T ss_dssp             EECCHHHHHHHHTTCEEEEEEEEESC------CCHHHHHHHHHHHHHHCGGGSEEEEE------CTTSSEEEEECCSSSC
T ss_pred             HHhCHHhhhcccCceEEEEEEEEcCC------CCHHHHHHHHHHHHHhchhheEEEEE------eCCeeEEEEECCCCCc
Confidence            46888888664  2455555544433      35899999999999999999887751      11111111111000  


Q ss_pred             --ChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHHHHHHHHHHhc
Q 040740          133 --FLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTAR  207 (217)
Q Consensus       133 --sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~r  207 (217)
                        ...+...... .....-.+..    .  ..+.|+..+.+.. .+++..|.+.+||.++||.|+..|++.+.++..
T Consensus        76 ~~~~~d~~~~~~-~~~~~~~~~~----l--~~~~~l~~~~i~~-~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~  144 (175)
T d1q9ja1          76 GICVIDGTAATN-GSPSGNAELR----L--DQSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYT  144 (175)
T ss_dssp             CCEEEC-------------CCCC----C--CTTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcccchh-HHHHhhcccC----c--cCCCCeEEEEEEe-cCCeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence              0001100000 0000001111    1  2245666555543 347888889999999999999999988865443
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure