Citrus Sinensis ID: 041055

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------

MSADISEEQTGKSSGSKFPNSGFDSETGIYHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL

ccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHccccccccccccccEEEEcccccEEcHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHccccEEccccccccHHHHHHHHHHcccEEEEEcHHHHHHHHcccccEEEEcccccccccccHHHHHHcccccccccccccccccEEEEEcccccccccccHEEccHHHHHHHHHHHHccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccECcccHHHHHHHHHccccccccccccEEECccccccHHHHHHHHHHccccEEEECccccccccHHcccccccccccccccccccccccEEEEEcccccccccccccEEEEEEcccccccccccHHHHHcccccccccccccEEEECccccEEEEccccHHHHccccccccHHHHHHHHccccccEEEEEcccccccccEEEEEEEEcccccccHHHHHHHHHHcc

***********************DSETGIYHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable 4-coumarate--CoA ligase 1		probable	Q54P77
2-succinylbenzoate--CoA ligase	Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA).	probable	C5D6U5
4-coumarate--CoA ligase-like 5	Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Converts 12-oxo-phytodienoic acid (OPDA) and 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoic acid (OPC-8:0) into OPDA-CoA and OPC-8:0-CoA, respectively.	probable	Q84P21

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TSY, chain A
Confidence level:very confident
Coverage over the Query: 27-480
View the alignment between query and template
View the model in PyMOL