Citrus Sinensis ID: 041058


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
IHAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
cEEEEEEEEEcccccEEcEEEccccccccccccEEEEEcccEEEEEccccccccccccccccccccccccccccccccccEEEEEccccccccEEEccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccEEccccccEEEEEcc
ccccEEEEEEcccccEEEEEEcccEcEcccccEEEEEccccEEEEEEEEEEEccccEEEEEEcccccEccccccccccccEEEEEEEEHHHEEEEEEEccccEcccEEEEEcccccccccccEEcccccccHHcccccccccHHHHccccccccccccccccccHHHHHHHHHccccEcccccHHHHcEEEEccccEEEEEcc
IHAAAFEIQNNCIYTVWaaanpgggkelhqhQSWHINLTDAGSIWArtncnfnangtgncesgdcdgvlncasnasppvtLAEYSLNVSSNFDLFSISLmkgfnipmelkgtssMCTQVIKCagdinglcpnelrhpggcnnpctlfkndqfccnvdrrscgatAYSKIFKnlcpnvytypmddpastlacptgtgykvvfcp
IHAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
IHAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
****AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFC*
IHAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
IHAAAFEIQNNCIYTVWAAANPG*********SWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
*HAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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IHAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query203 2.2.26 [Sep-21-2011]
P81370225 Thaumatin-like protein OS N/A no 0.985 0.888 0.575 3e-64
P50700244 Osmotin-like protein OSM3 yes no 0.980 0.815 0.558 1e-62
P25096202 Protein P21 OS=Glycine ma no no 0.975 0.980 0.558 7e-62
E3SU11226 Thaumatin-like protein OS N/A no 0.990 0.889 0.541 1e-61
G5DC91200 Thaumatin-like protein 1 N/A no 0.950 0.965 0.530 5e-59
P07052226 Pathogenesis-related prot N/A no 0.985 0.884 0.536 2e-58
P13046226 Pathogenesis-related prot N/A no 0.985 0.884 0.526 2e-57
Q01591238 Osmotin-like protein TPM- N/A no 0.985 0.840 0.531 2e-56
P14170246 Osmotin OS=Nicotiana taba N/A no 0.985 0.813 0.531 2e-56
P50702247 Osmotin-like protein OSML N/A no 0.985 0.809 0.531 5e-56
>sp|P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 Back     alignment and function desciption
 Score =  244 bits (623), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 118/205 (57%), Positives = 140/205 (68%), Gaps = 5/205 (2%)

Query: 2   HAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTG 58
             A F I NNC +TVWAAA PGGGK L + Q+W IN    T    +W RT CNF+  G G
Sbjct: 23  RGATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRG 82

Query: 59  NCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQ 118
            C++GDC+G+L C +   PP TLAEY+LN  +N D F ISL+ GFN+ ME   TS  CT+
Sbjct: 83  KCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTR 142

Query: 119 VIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVY 178
            IKC  DING CPNELR PGGCNNPCT+FK DQ+CCN    +CG T +SK FK+ CP+ Y
Sbjct: 143 GIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSG--NCGLTNFSKFFKDRCPDAY 200

Query: 179 TYPMDDPASTLACPTGTGYKVVFCP 203
           +YP DD  ST  CP GT YKVVFCP
Sbjct: 201 SYPKDDQTSTFTCPAGTNYKVVFCP 225




Has antifungal activity.
Actinidia deliciosa (taxid: 3627)
>sp|P50700|OSL3_ARATH Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2 Back     alignment and function description
>sp|P25096|P21_SOYBN Protein P21 OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|E3SU11|ALL13_OLEEU Thaumatin-like protein OS=Olea europaea PE=1 SV=1 Back     alignment and function description
>sp|G5DC91|TLP1_MANZA Thaumatin-like protein 1 (Fragment) OS=Manilkara zapota GN=TLP PE=3 SV=1 Back     alignment and function description
>sp|P07052|PRR2_TOBAC Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P13046|PRR1_TOBAC Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|Q01591|TPM1_SOLLC Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1 Back     alignment and function description
>sp|P14170|OSMO_TOBAC Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2 Back     alignment and function description
>sp|P50702|OS81_SOLCO Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
449452358223 PREDICTED: thaumatin-like protein-like [ 0.995 0.905 0.575 4e-66
224058461231 predicted protein [Populus trichocarpa] 0.995 0.874 0.557 2e-63
161375756230 osmotin [Piper colubrinum] 0.985 0.869 0.575 2e-63
270271313241 pathogenesis-related thaumatin, partial 1.0 0.842 0.555 2e-63
225426787239 PREDICTED: osmotin-like protein OSM34 [V 0.985 0.836 0.582 3e-63
290578585239 thaumatin-like protein [Vitis cinerea va 0.985 0.836 0.582 3e-63
255537363225 Osmotin precursor, putative [Ricinus com 0.990 0.893 0.556 3e-63
147797244247 hypothetical protein VITISV_023861 [Viti 0.985 0.809 0.577 9e-63
34538351242 osmotin-like protein I [Gossypium hirsut 0.990 0.830 0.560 9e-63
33338347238 osmotin-like pathogenesis-related protei 0.990 0.844 0.560 1e-62
>gi|449452358|ref|XP_004143926.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449495850|ref|XP_004159963.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  256 bits (653), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 118/205 (57%), Positives = 146/205 (71%), Gaps = 3/205 (1%)

Query: 2   HAAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTG 58
           HAA F+I+NNC + VWAAA PGGG+ L+Q+  W +N+   T A  IWARTNCNF+ +G G
Sbjct: 19  HAATFQIRNNCPFAVWAAAVPGGGRRLNQNDVWTLNVNPGTVAARIWARTNCNFDGSGRG 78

Query: 59  NCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQ 118
            C++GDC G+L C +  +PP TLAEY+LN  +N D F ISL+ GFN+PME   TS  C +
Sbjct: 79  RCQTGDCGGLLQCQAYGTPPNTLAEYALNQFNNLDFFDISLIDGFNVPMEFSPTSGGCAR 138

Query: 119 VIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVY 178
            I+C  DING CPNELR PGGCNNPCT+F  D++CC     SCG T YS+ FKN CP+ Y
Sbjct: 139 GIRCTADINGQCPNELRAPGGCNNPCTVFGGDRYCCTAPNSSCGPTDYSRFFKNRCPDAY 198

Query: 179 TYPMDDPASTLACPTGTGYKVVFCP 203
           +YP DD  ST  CP GT Y+VVFCP
Sbjct: 199 SYPKDDATSTFTCPGGTNYRVVFCP 223




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058461|ref|XP_002299521.1| predicted protein [Populus trichocarpa] gi|222846779|gb|EEE84326.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|161375756|gb|ABX71220.1| osmotin [Piper colubrinum] Back     alignment and taxonomy information
>gi|270271313|gb|ACZ67185.1| pathogenesis-related thaumatin, partial [Populus deltoides] Back     alignment and taxonomy information
>gi|225426787|ref|XP_002282917.1| PREDICTED: osmotin-like protein OSM34 [Vitis vinifera] Back     alignment and taxonomy information
>gi|290578585|gb|ADD51187.1| thaumatin-like protein [Vitis cinerea var. helleri x Vitis riparia] Back     alignment and taxonomy information
>gi|255537363|ref|XP_002509748.1| Osmotin precursor, putative [Ricinus communis] gi|223549647|gb|EEF51135.1| Osmotin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147797244|emb|CAN71616.1| hypothetical protein VITISV_023861 [Vitis vinifera] Back     alignment and taxonomy information
>gi|34538351|gb|AAQ74156.1| osmotin-like protein I [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|33338347|gb|AAQ13823.1|AF192271_1 osmotin-like pathogenesis-related protein [Gossypium hirsutum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
TAIR|locus:2139777244 OSM34 "osmotin 34" [Arabidopsi 0.980 0.815 0.558 1.6e-63
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.980 0.808 0.405 2.6e-40
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.980 0.808 0.390 6.1e-39
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.985 0.836 0.387 1.9e-37
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.960 0.547 0.382 4.4e-36
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.980 0.576 0.380 1.9e-35
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.985 0.809 0.353 3.2e-33
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.980 0.786 0.369 1.6e-31
TAIR|locus:2178077256 AT5G40020 "AT5G40020" [Arabido 0.985 0.781 0.342 2.6e-31
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.862 0.673 0.365 1.1e-30
TAIR|locus:2139777 OSM34 "osmotin 34" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 114/204 (55%), Positives = 140/204 (68%)

Query:     3 AAAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTGN 59
             AA FEI N C YTVWAAA+PGGG+ L   QSW +++   T    IW RTNCNF+++G G 
Sbjct:    22 AATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGR 81

Query:    60 CESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQV 119
             C++GDC G L C     PP TLAEY+LN  +N D + ISL+ GFNIPME   TSS C ++
Sbjct:    82 CQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRI 141

Query:   120 IKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYT 179
             + C  DING CPN LR PGGCNNPCT+F+ +Q+CC   + SC  T YS+ FK  CP+ Y+
Sbjct:   142 L-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYS 200

Query:   180 YPMDDPASTLACPTGTGYKVVFCP 203
             YP DDP ST  C T T Y+VVFCP
Sbjct:   201 YPQDDPTSTFTC-TNTNYRVVFCP 223




GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
GO:0009651 "response to salt stress" evidence=IEP
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0009816 "defense response to bacterium, incompatible interaction" evidence=ISS
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178077 AT5G40020 "AT5G40020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
E3SU11ALL13_OLEEUNo assigned EC number0.54140.99010.8893N/Ano
P14170OSMO_TOBACNo assigned EC number0.53110.98520.8130N/Ano
P81370TLP_ACTDENo assigned EC number0.57560.98520.8888N/Ano
P12670NP24_SOLLCNo assigned EC number0.53110.98520.8097N/Ano
P13046PRR1_TOBACNo assigned EC number0.52680.98520.8849N/Ano
P81295PRR3_JUNASNo assigned EC number0.50490.95070.8577N/Ano
P07052PRR2_TOBACNo assigned EC number0.53650.98520.8849N/Ano
G5DC91TLP1_MANZANo assigned EC number0.53060.95070.965N/Ano
Q01591TPM1_SOLLCNo assigned EC number0.53110.98520.8403N/Ano
P50700OSL3_ARATHNo assigned EC number0.55880.98020.8155yesno
P50701OS13_SOLCONo assigned EC number0.52630.98520.8130N/Ano
P50702OS81_SOLCONo assigned EC number0.53110.98520.8097N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.8918.1
hypothetical protein (231 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
pfam00314212 pfam00314, Thaumatin, Thaumatin family 3e-72
smart00205218 smart00205, THN, Thaumatin family 3e-71
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 5e-59
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 2e-47
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 9e-36
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 1e-25
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 7e-24
>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
 Score =  217 bits (554), Expect = 3e-72
 Identities = 92/213 (43%), Positives = 119/213 (55%), Gaps = 20/213 (9%)

Query: 10  NNCIYTVWAAANPG--------GGKELHQHQSWHINLTD--AGSIWARTNCNFNANGTGN 59
           NNC YTVW    PG        GG  L+  QSW +++    +G IW RT C+F+A G G+
Sbjct: 1   NNCPYTVWPGILPGGGAPPLSTGGFALNPGQSWSLDVPAGWSGRIWGRTGCSFDAGGRGS 60

Query: 60  CESGDCDGVLNCA-SNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQ 118
           C++GDC G L C  S  +PP TLAE++LN     D + ISL+ GFN+PM +  T     +
Sbjct: 61  CQTGDCGGKLECNGSGGAPPATLAEFTLNGGGGLDFYDISLVDGFNLPMSVTPTGGGNCK 120

Query: 119 VIKCAGDINGLCPNELR-----HPGGCNNPCTLFKNDQFCCNVD---RRSCGATAYSKIF 170
              CA DING CP+EL+         C + C  F  D++CC        +C  T YSK F
Sbjct: 121 AAGCAADINGQCPSELQVKSNGRVVACKSACEAFNTDEYCCRGAYGTPDTCKPTDYSKFF 180

Query: 171 KNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP 203
           K  CP+ Y+Y  DDP ST  CP GT YK+ FCP
Sbjct: 181 KAACPDAYSYAYDDPTSTFTCP-GTNYKITFCP 212


Length = 212

>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 203
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 98.07
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=2.8e-81  Score=532.91  Aligned_cols=197  Identities=40%  Similarity=0.943  Sum_probs=186.8

Q ss_pred             EEEEEeCCCCceeeeeeC--------CCCeeecCCCeeEEEe--ecceeeeeeecccCCCCCCcCCccCCCCCccccCCC
Q 041058            5 AFEIQNNCIYTVWAAANP--------GGGKELHQHQSWHINL--TDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASN   74 (203)
Q Consensus         5 ~~ti~N~C~~tVwp~~~p--------~~g~~L~~g~s~~~~v--~wsGriW~RtgCs~~~~g~~~C~TGdCgg~l~C~~~   74 (203)
                      +|||+|||+||||||+++        .+||+|+||++++|.|  .|+|||||||+|+||+.|+++|+||||+|+|+|++.
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            599999999999999975        3799999999999999  899999999999999999999999999999999974


Q ss_pred             -CCCCcceEEEEeccCCCcccccccccccccCceeeeecC--CCccCCccCccccccCCCCCCCCCC------CccCccc
Q 041058           75 -ASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTS--SMCTQVIKCAGDINGLCPNELRHPG------GCNNPCT  145 (203)
Q Consensus        75 -g~~p~TlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~--g~C~~~~~C~~dl~~~CP~~L~~~~------gC~SaC~  145 (203)
                       |.||+|||||+|++.+++|||||||||||||||+|+|++  +.| +.++|.+|||+.||+||++++      ||+|||+
T Consensus        81 ~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C-~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~  159 (219)
T cd09218          81 GGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGC-RTAGCVADLNAVCPAELQVKNSGGRVVACKSACL  159 (219)
T ss_pred             CCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCC-CCCcccCcccccCCHHHeeccCCCcEeeecCHHH
Confidence             579999999999987789999999999999999999976  369 999999999999999999862      8999999


Q ss_pred             ccCCCCccccCC---CCCCCCchhHHHHHhcCcccccCCCCCCCCceecCCCCceEEEec
Q 041058          146 LFKNDQFCCNVD---RRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFC  202 (203)
Q Consensus       146 ~~~~~~~CC~g~---p~~C~pt~ys~~fk~~CP~AYsya~DD~tstftC~~~~~y~vtFC  202 (203)
                      +|++|||||+|+   |++|+|+.||++||++||+||+|||||++|+|+|+++++|+|+||
T Consensus       160 ~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         160 AFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            999999999997   899999999999999999999999999999999998899999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-63
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 1e-61
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 1e-56
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 1e-55
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 4e-53
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 5e-53
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 5e-50
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 5e-50
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 1e-49
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 1e-49
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 1e-49
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 6e-49
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 5e-48
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 7e-28
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 3e-25
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 8e-19
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure

Iteration: 1

Score = 238 bits (606), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 114/203 (56%), Positives = 143/203 (70%), Gaps = 6/203 (2%) Query: 4 AAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTGNC 60 A FEI N C YTVWAAA PGGG++L+Q QSW IN+ T G IW RT C+F+ +G G C Sbjct: 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRC 60 Query: 61 ESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVI 120 ++GDC GVL+C + +PP TLAE++LN +N D F ISL+ GFN+PM+ TS C + I Sbjct: 61 QTGDCGGVLSCTAYGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGI 119 Query: 121 KCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPNVYTY 180 +CA DING CP L+ PGGCNNPCT+FK DQ+CCN +C T YS+ FK CP+ Y+Y Sbjct: 120 RCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSG--ACSPTDYSQFFKRNCPDAYSY 177 Query: 181 PMDDPASTLACPTGTGYKVVFCP 203 P DD +T CP GT Y+VVFCP Sbjct: 178 PKDDQTTTFTCPGGTNYRVVFCP 200
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 3e-54
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 1e-51
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 2e-46
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 3e-46
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 5e-43
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 1e-21
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
 Score =  171 bits (433), Expect = 3e-54
 Identities = 100/206 (48%), Positives = 126/206 (61%), Gaps = 6/206 (2%)

Query: 4   AAFEIQNNCIYTVWAAANP-GGGKELHQHQSWHINLTD---AGSIWARTNCNFNANGTGN 59
           A F + N C +TVWAA+ P GGG++L++ +SW I       A  IWART C F+A+G G+
Sbjct: 1   AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGS 60

Query: 60  CESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSM-CTQ 118
           C +GDC GVL C      P TLAEY+L   +N D F ISL+ GFN+PM         C++
Sbjct: 61  CRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSR 120

Query: 119 VIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCC-NVDRRSCGATAYSKIFKNLCPNV 177
             +CA D+N  CP ELR  G CNN C +FK D++CC       C  T YS+ FK  CP+ 
Sbjct: 121 GPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDA 180

Query: 178 YTYPMDDPASTLACPTGTGYKVVFCP 203
           Y+YP DD  ST  CP GT YKVVFCP
Sbjct: 181 YSYPKDDATSTFTCPAGTNYKVVFCP 206


>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query203
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A367 Laminaripentaose-producing beta-1,3-guluase (lphas 80.65
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
Probab=100.00  E-value=6e-88  Score=565.33  Aligned_cols=197  Identities=58%  Similarity=1.226  Sum_probs=191.1

Q ss_pred             eEEEEEeCCCCceeeeeeCCCCeeecCCCeeEEEe---ecceeeeeeecccCCCCCCcCCccCCCCCccccCCCCCCCcc
Q 041058            4 AAFEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPPVT   80 (203)
Q Consensus         4 ~~~ti~N~C~~tVwp~~~p~~g~~L~~g~s~~~~v---~wsGriW~RtgCs~~~~g~~~C~TGdCgg~l~C~~~g~~p~T   80 (203)
                      ++|+|+|+|+||||||++|++||+|+|||+++|.+   ||+|||||||+|+||++|+++|+||||+|.|+|++.|+||+|
T Consensus         1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT   80 (200)
T 1z3q_A            1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT   80 (200)
T ss_dssp             CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred             CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence            58999999999999999999999999999999999   446999999999999999999999999999999998899999


Q ss_pred             eEEEEeccCCCcccccccccccccCceeeeecCCCccCCccCccccccCCCCCCCCCCCccCcccccCCCCccccCCCCC
Q 041058           81 LAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRS  160 (203)
Q Consensus        81 laEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g~C~~~~~C~~dl~~~CP~~L~~~~gC~SaC~~~~~~~~CC~g~p~~  160 (203)
                      ||||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||+.||.|||+++||+|||++|++|||||+|  ++
T Consensus        81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g--~~  157 (200)
T 1z3q_A           81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNS--GA  157 (200)
T ss_dssp             EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTT--SC
T ss_pred             eEEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCC--CC
Confidence            999999987789999999999999999999998899 999999999999999999999999999999999999999  69


Q ss_pred             CCCchhHHHHHhcCcccccCCCCCCCCceecCCCCceEEEecC
Q 041058          161 CGATAYSKIFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP  203 (203)
Q Consensus       161 C~pt~ys~~fk~~CP~AYsya~DD~tstftC~~~~~y~vtFCP  203 (203)
                      |+|+.||++||++||+||||||||++|||+|+++++|+|+|||
T Consensus       158 C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP  200 (200)
T 1z3q_A          158 CSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP  200 (200)
T ss_dssp             CCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred             CCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence            9999999999999999999999999999999988999999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 203
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 2e-63
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 2e-63
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-61
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
 Score =  193 bits (491), Expect = 2e-63
 Identities = 105/208 (50%), Positives = 125/208 (60%), Gaps = 9/208 (4%)

Query: 3   AAAFEIQNNCIYTVWAAANP-GGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTG 58
           +  FE+ NNC YTVWAAA P GGG+ L + QSW       T    IW RTNCNF+  G G
Sbjct: 1   SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG 60

Query: 59  NCESGDCDGVLNCASNASPPVTLAEYSLNVSSNFDLFSISLMKGFNIPMELK--GTSSMC 116
            C++GDC GVL C     PP TLAEY+LN  SN D + IS++ GFNIPM           
Sbjct: 61  WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK 120

Query: 117 TQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKIFKNLCPN 176
              I+C  +ING CP  LR PGGCNNPCT F   Q+CC   +  CG T  S+ FK  CP+
Sbjct: 121 CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCT--QGPCGPTELSRWFKQRCPD 178

Query: 177 VYTYPMDDPASTLACPTG-TGYKVVFCP 203
            Y+YP DDP ST  C +  T YKV+FCP
Sbjct: 179 AYSYPQDDPTSTFTCTSWTTDYKVMFCP 206


>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query203
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=5.1e-85  Score=549.10  Aligned_cols=198  Identities=54%  Similarity=1.124  Sum_probs=189.7

Q ss_pred             ceEEEEEeCCCCceeeeeeC-CCCeeecCCCeeEEEe---ecceeeeeeecccCCCCCCcCCccCCCCCccccCCCCCCC
Q 041058            3 AAAFEIQNNCIYTVWAAANP-GGGKELHQHQSWHINL---TDAGSIWARTNCNFNANGTGNCESGDCDGVLNCASNASPP   78 (203)
Q Consensus         3 a~~~ti~N~C~~tVwp~~~p-~~g~~L~~g~s~~~~v---~wsGriW~RtgCs~~~~g~~~C~TGdCgg~l~C~~~g~~p   78 (203)
                      +++|||+|||+|||||+++| .|||+|+||++++|.+   ||+|||||||||+||++|+++|+||||+|.|+|++.|.||
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~G~pP   80 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP   80 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred             CCEEEEEeCCCCCcccccccCCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCCCCCC
Confidence            57999999999999999999 6799999999999999   7789999999999999999999999999999999999999


Q ss_pred             cceEEEEeccCCCcccccccccccccCceeeeecCC---CccCCccCccccccCCCCCCCCCCCccCcccccCCCCcccc
Q 041058           79 VTLAEYSLNVSSNFDLFSISLMKGFNIPMELKGTSS---MCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCN  155 (203)
Q Consensus        79 ~TlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g---~C~~~~~C~~dl~~~CP~~L~~~~gC~SaC~~~~~~~~CC~  155 (203)
                      +|||||+|++.+++|||||||||||||||+|+|+++   .| +.++|.+|||+.||+|||+++||+|+|.+|++|||||+
T Consensus        81 ~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C-~~~~C~~dln~~CP~~L~v~~~C~saC~~~~~~~~CCt  159 (208)
T d1auna_          81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCT  159 (208)
T ss_dssp             CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCT
T ss_pred             cceEEEEeccCCCcceeccccccccccceEEeccCCCCCCc-CcccccCCccccCCHhhccCCCCccceeecCCCccccC
Confidence            999999999877899999999999999999999873   69 99999999999999999999999999999999999998


Q ss_pred             CCCCCCCCchhHHHHHhcCcccccCCCCCCCCceecCCC-CceEEEecC
Q 041058          156 VDRRSCGATAYSKIFKNLCPNVYTYPMDDPASTLACPTG-TGYKVVFCP  203 (203)
Q Consensus       156 g~p~~C~pt~ys~~fk~~CP~AYsya~DD~tstftC~~~-~~y~vtFCP  203 (203)
                      .  ++|+|++||++||++||+||||||||++|||+|+++ ++|+|+|||
T Consensus       160 ~--~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP  206 (208)
T d1auna_         160 Q--GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP  206 (208)
T ss_dssp             T--SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred             C--CcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence            6  589999999999999999999999999999999875 789999999



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure