Citrus Sinensis ID: 041120


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEECcccEEcccccccccccccEEcccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEECccccccccccccccccccccccc
***RLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
xxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cathepsin L1 Important for the overall degradation of proteins in lysosomes.probableP06797
Cathepsin K Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation (By similarity). Mediates thyroxine liberation by limited proteolysis of thyroglobulin at neutral pH in vitro.probableQ9GLE3
Cathepsin K Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation.probableP43235

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1S4V, chain A
Confidence level:very confident
Coverage over the Query: 141-339
View the alignment between query and template
View the model in PyMOL
Template: 1PCI, chain A
Confidence level:very confident
Coverage over the Query: 54-339
View the alignment between query and template
View the model in PyMOL