Citrus Sinensis ID: 041120

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEcccEEcccccccccccccEEcccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEEEccccccccccccccccccccccc
cccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccccEEHHHHcccccccEccccEcHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHccEccEcccEcccHHHHHHHHHHHccEcEccccccccccccccHHHHHcccEcccEEEEcccccHHHHccccEEcccccccccEEEEEEEEEccccccEEEEEccEcccccEccEEEEEcccccccccccEEEEccccccccc
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLgipagawsegypqkydpqsMEERFENWLKQYSReygsedewqrrfgiyssnVQYIDYINsqnlsfkltdnkfadlsneEFISTYlgynkpyneprwpsvqylglpasvdwrkegavtpvkdqgqcgscwAFSAVAAVEGINklktgklvslseqelvdcdvnsenqgcnggyMEKAFEFITKiggvtteddypyrgkndrcqtdktkhhavtitgyeaipaRYAFQLyshgvfdeycghqlnhgvtvvgygedhgeKYWLVKNswgtswgeagyirmarnspssnigicgilmqasypvkrc
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGgvtteddypyrgkndrcqtdktkhHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGilmqasypvkrc
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
***RLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKY*******RFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQAS******
***RLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTY******************GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
*QHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPARYAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKRC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query340 2.2.26 [Sep-21-2011]
P25776 458 Oryzain alpha chain OS=Or yes no 0.835 0.620 0.484 2e-77
Q9STL4361 KDEL-tailed cysteine endo no no 0.9 0.847 0.462 4e-77
P43297 462 Cysteine proteinase RD21a no no 0.808 0.595 0.480 2e-76
Q9FGR9361 KDEL-tailed cysteine endo no no 0.911 0.858 0.462 8e-76
P12412362 Vignain OS=Vigna mungo PE N/A no 0.817 0.767 0.482 9e-75
O65493355 Xylem cysteine proteinase no no 0.814 0.780 0.485 1e-74
P25803362 Vignain OS=Phaseolus vulg N/A no 0.817 0.767 0.473 5e-74
Q9SUT0364 Probable cysteine protein no no 0.805 0.752 0.477 2e-72
A5HII1380 Actinidain OS=Actinidia d N/A no 0.891 0.797 0.429 3e-72
O65039360 Vignain OS=Ricinus commun N/A no 0.808 0.763 0.477 3e-72
>sp|P25776|ORYA_ORYSJ Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2 Back     alignment and function desciption
 Score =  289 bits (739), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 204/322 (63%), Gaps = 38/322 (11%)

Query: 53  YDPQSMEER---FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQN----LSFKL 105
           Y  +S EE    +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L
Sbjct: 28  YGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRL 87

Query: 106 TDNKFADLSNEEFISTYLGY-NKPYNEPRWPSVQYLG-----LPASVDWRKEGAVTPVKD 159
             N+FADL+NEE+  TYLG  NKP  E R  S +YL      LP SVDWR +GAV  +KD
Sbjct: 88  GLNRFADLTNEEYRDTYLGLRNKPRRE-RKVSDRYLAADNEALPESVDWRTKGAVAEIKD 146

Query: 160 QGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFIT 219
           QG CGSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S N+GCNGG M+ AF+FI 
Sbjct: 147 QGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT-SYNEGCNGGLMDYAFDFII 205

Query: 220 KIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR------------------- 260
             GG+ TEDDYPY+GK++RC  ++     VTI  YE +                      
Sbjct: 206 NNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIE 265

Query: 261 ---YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMAR 317
               AFQLYS G+F   CG  L+HGV  VGYG ++G+ YW+V+NSWG SWGE+GY+RM R
Sbjct: 266 AGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMER 325

Query: 318 NSPSSNIGICGILMQASYPVKR 339
           N  +S+ G CGI ++ SYP+K+
Sbjct: 326 NIKASS-GKCGIAVEPSYPLKK 346

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|Q9SUT0|CPR3_ARATH Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1 Back     alignment and function description
>sp|A5HII1|ACTN_ACTDE Actinidain OS=Actinidia deliciosa PE=1 SV=1 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query340
255568345347 cysteine protease, putative [Ricinus com 0.923 0.904 0.596 1e-110
225446523358 PREDICTED: KDEL-tailed cysteine endopept 0.926 0.879 0.542 1e-105
302143380354 unnamed protein product [Vitis vinifera] 0.926 0.889 0.542 1e-105
297843430343 hypothetical protein ARALYDRAFT_887827 [ 0.932 0.924 0.523 2e-95
358343350338 Cysteine proteinase [Medicago truncatula 0.920 0.926 0.525 2e-95
18390634343 cysteine proteinase-like protein [Arabid 0.932 0.924 0.520 5e-95
357474523345 Cysteine proteinase [Medicago truncatula 0.917 0.904 0.517 1e-92
449460678317 PREDICTED: KDEL-tailed cysteine endopept 0.814 0.873 0.562 4e-92
449524070314 PREDICTED: KDEL-tailed cysteine endopept 0.808 0.875 0.562 2e-91
356543010306 PREDICTED: LOW QUALITY PROTEIN: vignain- 0.811 0.901 0.548 3e-90
>gi|255568345|ref|XP_002525147.1| cysteine protease, putative [Ricinus communis] gi|223535606|gb|EEF37274.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/342 (59%), Positives = 247/342 (72%), Gaps = 28/342 (8%)

Query: 24  MLRNAVLSLFLLWVLGIPAGAWSE--GYPQKYDPQSMEERFENWLKQYSREYGSEDEWQR 81
           M++NA L L  L  L IP+ A SE    P    P +M+ R++ WL+QY R+Y ++DE+  
Sbjct: 6   MIKNAGLMLITLCTLWIPSIARSEIHSLPIDSAPTAMKVRYDKWLEQYGRKYDTKDEYLL 65

Query: 82  RFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNEPRWPSVQY-- 139
           RFGIY SN+Q+I+YINSQNLSFKLTDNKFADL+N+EF S YLGY     + R  S  +  
Sbjct: 66  RFGIYHSNIQFIEYINSQNLSFKLTDNKFADLTNDEFNSIYLGYQIRSYKRRNLSHMHEN 125

Query: 140 -LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCD 198
              LP +VDWR+ GAVTP+KDQGQCGSCWAFSAVAAVEGINK+KTG LVSLSEQELVDCD
Sbjct: 126 STDLPDAVDWRENGAVTPIKDQGQCGSCWAFSAVAAVEGINKIKTGNLVSLSEQELVDCD 185

Query: 199 VNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIP 258
           VN +N+GCNGG+MEKAF FI  IGG+TTE+DYPY+G +  C+  KT +HAV I GYE +P
Sbjct: 186 VNGDNKGCNGGFMEKAFTFIKSIGGLTTENDYPYKGTDGSCEKAKTDNHAVIIGGYETVP 245

Query: 259 AR----------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKY 296
           A                       Y FQLYS GVF  YCG QLNHGVT+VGYG+++G+KY
Sbjct: 246 ANNENSLKVAVSKQPVSVAIDASGYEFQLYSEGVFSGYCGIQLNHGVTIVGYGDNNGQKY 305

Query: 297 WLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK 338
           WLVKNSWG  WGE+GYIRM R+S S   G+CGI M+ SYP+K
Sbjct: 306 WLVKNSWGKGWGESGYIRMKRDS-SDTKGMCGIAMEPSYPIK 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225446523|ref|XP_002275891.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143380|emb|CBI21941.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297843430|ref|XP_002889596.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp. lyrata] gi|297335438|gb|EFH65855.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|358343350|ref|XP_003635767.1| Cysteine proteinase [Medicago truncatula] gi|355501702|gb|AES82905.1| Cysteine proteinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|18390634|ref|NP_563764.1| cysteine proteinase-like protein [Arabidopsis thaliana] gi|8844131|gb|AAF80223.1|AC025290_12 Contains similarity to a cysteine endopeptidase 1 from Phaseolus vulgaris gb|U52970 and is a member of the papain cysteine protease family PF|00112 [Arabidopsis thaliana] gi|332189848|gb|AEE27969.1| cysteine proteinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357474523|ref|XP_003607546.1| Cysteine proteinase [Medicago truncatula] gi|358347207|ref|XP_003637651.1| Cysteine proteinase [Medicago truncatula] gi|355503586|gb|AES84789.1| Cysteine proteinase [Medicago truncatula] gi|355508601|gb|AES89743.1| Cysteine proteinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449460678|ref|XP_004148072.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449524070|ref|XP_004169046.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|356543010|ref|XP_003539956.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query340
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.682 0.642 0.463 1.1e-74
TAIR|locus:2030427356 XCP2 "xylem cysteine peptidase 0.602 0.575 0.465 2.3e-70
TAIR|locus:2024362 437 XBCP3 "xylem bark cysteine pep 0.585 0.455 0.470 9.8e-70
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.655 0.640 0.422 2e-67
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.582 0.580 0.443 6.8e-65
TAIR|locus:2038515343 AT1G06260 [Arabidopsis thalian 0.697 0.690 0.528 1.1e-64
TAIR|locus:2029934346 AT1G29080 [Arabidopsis thalian 0.6 0.589 0.422 3.3e-63
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.579 0.554 0.419 1.4e-60
UNIPROTKB|F1NYJ1339 CTSL2 "Uncharacterized protein 0.602 0.604 0.425 7.8e-60
UNIPROTKB|F1PAK0339 CTSS "Cathepsin S" [Canis lupu 0.655 0.657 0.395 5.4e-59
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 517 (187.1 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
 Identities = 113/244 (46%), Positives = 153/244 (62%)

Query:    24 MLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRF 83
             M R  VL+L +L VL    G        + +  S+ E +E W   ++     E++  +RF
Sbjct:     1 MKRFIVLALCMLMVLETTKGLDFHNKDVESE-NSLWELYERWRSHHTVARSLEEK-AKRF 58

Query:    84 GIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYN-----EPR-WPSV 137
              ++  NV++I   N ++ S+KL  NKF D+++EEF  TY G N  ++     E +   S 
Sbjct:    59 NVFKHNVKHIHETNKKDKSYKLKLNKFGDMTSEEFRRTYAGSNIKHHRMFQGEKKATKSF 118

Query:   138 QYLG---LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQEL 194
              Y     LP SVDWRK GAVTPVK+QGQCGSCWAFS V AVEGIN+++T KL SLSEQEL
Sbjct:   119 MYANVNTLPTSVDWRKNGAVTPVKNQGQCGSCWAFSTVVAVEGINQIRTKKLTSLSEQEL 178

Query:   195 VDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGY 254
             VDCD N +NQGCNGG M+ AFEFI + GG+T+E  YPY+  ++ C T+K     V+I G+
Sbjct:   179 VDCDTN-QNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDETCDTNKENAPVVSIDGH 237

Query:   255 EAIP 258
             E +P
Sbjct:   238 EDVP 241
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024362 XBCP3 "xylem bark cysteine peptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038515 AT1G06260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029934 AT1G29080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYJ1 CTSL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PAK0 CTSS "Cathepsin S" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P61277CATK_MACMU3, ., 4, ., 2, 2, ., 3, 80.41690.81170.8389yesno
Q9GLE3CATK_PIG3, ., 4, ., 2, 2, ., 3, 80.41060.81170.8363yesno
P06797CATL1_MOUSE3, ., 4, ., 2, 2, ., 1, 50.40490.80290.8173yesno
P43235CATK_HUMAN3, ., 4, ., 2, 2, ., 3, 80.41060.81170.8389yesno
Q5E968CATK_BOVIN3, ., 4, ., 2, 2, ., 3, 80.41060.81170.8389yesno
Q8HY81CATS_CANFA3, ., 4, ., 2, 2, ., 2, 70.40170.87050.8942yesno
Q23894CYSP3_DICDI3, ., 4, ., 2, 2, ., -0.39760.88820.8961yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.22.67LOW CONFIDENCE prediction!
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-107
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-94
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 3e-85
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 1e-64
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 1e-63
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 1e-59
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-33
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 1e-33
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 2e-31
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 2e-26
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 2e-16
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 4e-16
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 8e-16
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 1e-12
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 3e-09
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 4e-07
PTZ00049 693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 0.001
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  310 bits (797), Expect = e-107
 Identities = 110/220 (50%), Positives = 134/220 (60%), Gaps = 31/220 (14%)

Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           LP S DWR++GAVTPVKDQGQCGSCWAFSAV A+EG   +KTGKLVSLSEQ+LVDCD  +
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCD--T 58

Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
            N GCNGG  + AFE+I K GG+ TE DYPY   +  C+  K+      I GY  +P   
Sbjct: 59  GNNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYND 118

Query: 261 ----------------------YAFQLYSHGVFDEY-CGHQLNHGVTVVGYGEDHGEKYW 297
                                   FQLY  GV+    C  +L+H V +VGYG ++G  YW
Sbjct: 119 EEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGTENGVPYW 178

Query: 298 LVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPV 337
           +VKNSWGT WGE GY R+AR      +  CGI  +ASYP+
Sbjct: 179 IVKNSWGTDWGENGYFRIAR-----GVNECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 340
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.96
cd00585 437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.86
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.7
PF03051 438 Peptidase_C1_2: Peptidase C1-like family This fami 99.62
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.54
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 98.7
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.01
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 95.18
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 90.64
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-82  Score=581.23  Aligned_cols=323  Identities=40%  Similarity=0.689  Sum_probs=267.7

Q ss_pred             CceeehhhhhccchhHHHHHHhhHHHHHHHHHH---HHHHhhhccccc--cCCCCCCChhhHHHHHHHHHHHhCCccCCH
Q 041120            2 QHRLFIAIYTNLHLKIAIDMRMMLRNAVLSLFL---LWVLGIPAGAWS--EGYPQKYDPQSMEERFENWLKQYSREYGSE   76 (340)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~m~~~~~l~l~~---~~~l~~~~~~~~--~~~~~~~~~~~~~~~f~~w~~~~~k~Y~~~   76 (340)
                      +||+.+++.+.++.++...-..-  . ++.+..   ...+.+ .....  ...|+   ...+++.|..|+.+|+|+|.+.
T Consensus        13 ~~r~~~~~~~~~~~~~~~~~~~~--~-~~~~~~v~~~~~~~i-~~v~~~~~~~~~---~l~~~~~F~~F~~kf~r~Y~s~   85 (372)
T KOG1542|consen   13 NHRSEMDCKTLVAFRKCPIEFTA--L-SVSLSVVPLGDDLTI-RQVVRLQDLNPR---GLGLEDSFKLFTIKFGRSYASR   85 (372)
T ss_pred             ccccccchhhhhhhhccchhhhh--h-hhhccccccchhhhh-hhhhhhcccCCc---ccchHHHHHHHHHhcCcccCcH
Confidence            79999999999998877432110  0 000000   000000 00000  11121   2345889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCC-CceEEEcccCCCCCHHHHHHhhcCCCCC-C-C---CCCCCCCCCCCCCCeeeccC
Q 041120           77 DEWQRRFGIYSSNVQYIDYINSQN-LSFKLTDNKFADLSNEEFISTYLGYNKP-Y-N---EPRWPSVQYLGLPASVDWRK  150 (340)
Q Consensus        77 ~E~~~R~~iF~~Nl~~I~~~N~~~-~s~~~g~N~FsDlt~eEf~~~~~g~~~~-~-~---~~~~~~~~~~~lP~~~Dwr~  150 (340)
                      +|..+|+.+|+.|+..+++++... .|.++|+|+|||||+|||++++++.+.. . .   ....+..+...||++||||+
T Consensus        86 eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~~~~~~~~~~~~~lP~~fDWR~  165 (372)
T KOG1542|consen   86 EEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPGDAAEAPIEPGESLPESFDWRD  165 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCccccccCcCCCCCCCCcccchhc
Confidence            999999999999999999999876 4899999999999999999999876652 1 1   11123344568999999999


Q ss_pred             CCCCCccCCCCCCCchHHHHHHHHHHHHHHHHcCCccccChhHhhhccCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 041120          151 EGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY  230 (340)
Q Consensus       151 ~g~vtpV~nQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~~gC~GG~~~~a~~~i~~~~Gi~~e~~y  230 (340)
                      +|+||||||||+||||||||+++++|++++|++|++++||||+|+||+..  +.||+||.+.+|++|+++.+|+..|++|
T Consensus       166 kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~--d~gC~GGl~~nA~~~~~~~gGL~~E~dY  243 (372)
T KOG1542|consen  166 KGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSC--DNGCNGGLMDNAFKYIKKAGGLEKEKDY  243 (372)
T ss_pred             cCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCc--CCcCCCCChhHHHHHHHHhCCccccccC
Confidence            99999999999999999999999999999999999999999999999976  9999999999999999898899999999


Q ss_pred             CCCCCCC-CcCCCCCCceeEEeceeEEcCCC--------------------cccccccCceecC---CCCCC-CCeEEEE
Q 041120          231 PYRGKND-RCQTDKTKHHAVTITGYEAIPAR--------------------YAFQLYSHGVFDE---YCGHQ-LNHGVTV  285 (340)
Q Consensus       231 Py~~~~~-~c~~~~~~~~~~~i~~y~~~~~~--------------------~~f~~y~~Gi~~~---~c~~~-~~Hav~i  285 (340)
                      ||++..+ .|...+ ....+.|.+|..++.+                    ..+|+|++||+.+   .|+.. ++|||+|
T Consensus       244 PY~g~~~~~C~~~~-~~~~v~I~~f~~l~~nE~~ia~wLv~~GPi~vgiNa~~mQ~YrgGV~~P~~~~Cs~~~~~HaVLl  322 (372)
T KOG1542|consen  244 PYTGKKGNQCHFDK-SKIVVSIKDFSMLSNNEDQIAAWLVTFGPLSVGINAKPMQFYRGGVSCPSKYICSPKLLNHAVLL  322 (372)
T ss_pred             CccccCCCccccch-hhceEEEeccEecCCCHHHHHHHHHhcCCeEEEEchHHHHHhcccccCCCcccCCccccCceEEE
Confidence            9999988 999884 5678999999999877                    6799999999998   39864 8999999


Q ss_pred             EEEeecC-CeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCcccceeecceeeeec
Q 041120          286 VGYGEDH-GEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR  339 (340)
Q Consensus       286 VGyg~~~-g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~~Cgi~~~~~yp~~~  339 (340)
                      ||||.+. .++|||||||||++|||+||+|+.||.     |+|||++.++-+.++
T Consensus       323 vGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~-----N~CGi~~mvss~~v~  372 (372)
T KOG1542|consen  323 VGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS-----NACGIADMVSSAAVN  372 (372)
T ss_pred             EeecCCCCCCceEEEECCccccccccceEEEeccc-----cccccccchhhhhcC
Confidence            9999987 899999999999999999999999993     459999999887764

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 3e-64
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 3e-59
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 3e-58
1pci_A322 Procaricain Length = 322 5e-58
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 5e-57
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 1e-55
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 1e-55
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 5e-55
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 1e-53
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 3e-53
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 6e-53
2act_A220 Crystallographic Refinement Of The Structure Of Act 8e-52
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 1e-51
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 1e-51
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 3e-51
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 6e-50
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 1e-49
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 2e-49
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 4e-49
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 4e-49
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 1e-48
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 2e-48
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-48
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 2e-48
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-48
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 2e-48
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 2e-48
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 3e-48
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 3e-48
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 3e-48
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-48
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-48
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 3e-48
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 1e-47
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-47
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-47
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 2e-47
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 2e-47
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 2e-47
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 3e-47
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 4e-47
1ppo_A216 Determination Of The Structure Of Papaya Protease O 1e-46
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 2e-46
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 1e-45
3h89_A220 A Combined Crystallographic And Molecular Dynamics 6e-45
3of8_A221 Structural Basis For Reversible And Irreversible In 7e-45
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-44
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 2e-44
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 6e-44
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 7e-44
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-43
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 1e-43
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 5e-43
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 9e-43
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 1e-42
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-42
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 2e-42
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 4e-42
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 1e-41
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 1e-41
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 1e-41
2vhs_A217 Cathsilicatein, A Chimera Length = 217 6e-41
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 4e-40
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 6e-40
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 1e-39
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 7e-39
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 2e-37
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 4e-37
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 4e-37
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 8e-37
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 1e-36
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 5e-36
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 1e-35
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 7e-35
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-32
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 3e-31
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 1e-29
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 2e-28
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 1e-23
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 4e-23
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 6e-23
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 9e-22
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 6e-21
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 7e-21
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 1e-20
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 6e-18
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 1e-17
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 1e-17
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 8e-17
1mir_A322 Rat Procathepsin B Length = 322 4e-16
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 7e-16
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 7e-15
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-14
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 8e-12
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 1e-11
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 1e-11
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-11
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 2e-11
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 4e-11
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 1e-10
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 3e-09
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 1e-08
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 1e-08
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 6e-08
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 5e-07
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 5e-07
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 9e-07
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 3e-06
1huc_A47 The Refined 2.15 Angstroms X-Ray Crystal Structure 1e-04
1sp4_A48 Crystal Structure Of Ns-134 In Complex With Bovine 6e-04
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  242 bits (617), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 146/221 (66%), Gaps = 25/221 (11%)
Query: 142 LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNS 201
           +PASVDWRK+GAVT VKDQGQCGSCWAFS + AVEGIN++KT KLVSLSEQELVDCD + 
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD- 60
Query: 202 ENQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR- 260
           +NQGCNGG M+ AFEFI + GG+TTE +YPY   +  C   K    AV+I G+E +P   
Sbjct: 61  QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEND 120
Query: 261 ---------------------YAFQLYSHGVFDEYCGHQLNHGVTVVGYGED-HGEKYWL 298
                                  FQ YS GVF   CG +L+HGV +VGYG    G KYW 
Sbjct: 121 ENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWT 180
Query: 299 VKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR 339
           VKNSWG  WGE GYIRM R   S   G+CGI M+ASYP+K+
Sbjct: 181 VKNSWGPEWGEKGYIRMER-GISDKEGLCGIAMEASYPIKK 220
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|1HUC|A Chain A, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 47 Back     alignment and structure
>pdb|1SP4|A Chain A, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 48 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-160
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-150
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-149
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-149
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-145
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-145
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-145
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-142
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-129
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-129
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-127
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-126
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-126
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-125
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-125
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-125
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-124
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-124
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-124
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-123
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-122
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-122
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-121
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-120
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-120
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-118
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-118
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-116
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-115
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-115
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-104
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 5e-99
3u8e_A222 Papain-like cysteine protease; papain-like cystein 3e-97
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 2e-86
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 8e-85
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 9e-83
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 2e-79
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 4e-71
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 7e-64
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 5e-29
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 4e-17
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 2e-10
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-06
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 5e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  449 bits (1156), Expect = e-160
 Identities = 126/310 (40%), Positives = 176/310 (56%), Gaps = 31/310 (10%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSN 115
           + + + F +W+  +++ Y + DE   RF I+  N+ YID  N +N S+ L  N+FADLSN
Sbjct: 16  ERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSN 75

Query: 116 EEFISTYLGYNKPYNEPRWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFS 170
           +EF   Y+G        +    +++      LP +VDWRK+GAVTPV+ QG CGSCWAFS
Sbjct: 76  DEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFS 135

Query: 171 AVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDDY 230
           AVA VEGINK++TGKLV LSEQELVDC+    + GC GGY   A E++ K  G+     Y
Sbjct: 136 AVATVEGINKIRTGKLVELSEQELVDCE--RRSHGCKGGYPPYALEYVAK-NGIHLRSKY 192

Query: 231 PYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLYSH 268
           PY+ K   C+  +     V  +G   +                           FQLY  
Sbjct: 193 PYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKG 252

Query: 269 GVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICG 328
           G+F+  CG +++  VT VGYG+  G+ Y L+KNSWGT+WGE GYIR+ R    ++ G+CG
Sbjct: 253 GIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAP-GNSPGVCG 311

Query: 329 ILMQASYPVK 338
           +   + YP K
Sbjct: 312 LYKSSYYPTK 321
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query340
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A 457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.8
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.72
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 96.15
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 95.33
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 95.09
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=3.3e-83  Score=611.85  Aligned_cols=280  Identities=41%  Similarity=0.782  Sum_probs=247.2

Q ss_pred             CCChhhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCceEEEcccCCCCCHHHHHHhhcCCCCCCCC
Q 041120           52 KYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNLSFKLTDNKFADLSNEEFISTYLGYNKPYNE  131 (340)
Q Consensus        52 ~~~~~~~~~~f~~w~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~s~~~g~N~FsDlt~eEf~~~~~g~~~~~~~  131 (340)
                      ..+++.+.++|++|+++|+|+|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|+|||.+||++++++.......
T Consensus        56 l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~  135 (363)
T 3tnx_A           56 LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYT  135 (363)
T ss_dssp             SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSCSSCSCCC
T ss_pred             hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhccccccccc
Confidence            45678999999999999999999999999999999999999999999989999999999999999999999876543221


Q ss_pred             ------CCCCCCCCCCCCCeeeccCCCCCCccCCCCCCCchHHHHHHHHHHHHHHHHcCCccccChhHhhhccCCCCCCC
Q 041120          132 ------PRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQG  205 (340)
Q Consensus       132 ------~~~~~~~~~~lP~~~Dwr~~g~vtpV~nQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~~g  205 (340)
                            .........+||++||||++|+||||||||.||||||||+++++|++++++++.++.||||+|+||+..  +.|
T Consensus       136 ~~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~--~~G  213 (363)
T 3tnx_A          136 TTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR--SYG  213 (363)
T ss_dssp             CSSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCT
T ss_pred             ccccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC--CCC
Confidence                  111122234799999999999999999999999999999999999999999999999999999999886  789


Q ss_pred             CCCCchHHHHHHHHHhCCCCCCCCCCCCCCCCCcCCCCCCceeEEeceeEEcCCC----------------------ccc
Q 041120          206 CNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAF  263 (340)
Q Consensus       206 C~GG~~~~a~~~i~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~~i~~y~~~~~~----------------------~~f  263 (340)
                      |+||++..|++|+.++ ||++|++|||.+.++.|..........++.+|..++..                      .+|
T Consensus       214 C~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F  292 (363)
T 3tnx_A          214 CNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDF  292 (363)
T ss_dssp             TBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHH
T ss_pred             CCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhh
Confidence            9999999999999887 89999999999988888765333445566666655443                      579


Q ss_pred             ccccCceecCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCcccceeecceeeeec
Q 041120          264 QLYSHGVFDEYCGHQLNHGVTVVGYGEDHGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVKR  339 (340)
Q Consensus       264 ~~y~~Gi~~~~c~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~~Cgi~~~~~yp~~~  339 (340)
                      ++|++|||..+|++.+||||+|||||+    +|||||||||++|||+|||||+||.++. .|+|||++.|+||+.|
T Consensus       293 ~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~-~~~CGI~~~a~yPikn  363 (363)
T 3tnx_A          293 QLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNS-YGVCGLYTSSFYPVKN  363 (363)
T ss_dssp             HTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCS-SCGGGTTSCEEEEECC
T ss_pred             hCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCC-CCcCCccceeeecccC
Confidence            999999999999988999999999987    4999999999999999999999998665 7899999999999976
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 340
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 2e-62
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 3e-60
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 6e-60
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 2e-59
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 2e-58
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 3e-58
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 1e-57
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-57
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 3e-57
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 3e-57
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 5e-57
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 6e-57
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 6e-54
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 9e-53
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 1e-52
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-51
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 2e-51
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 5e-51
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 4e-40
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 1e-39
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 1e-07
d3gcba_ 458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 0.004
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 4e-06
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 2e-62
 Identities = 112/315 (35%), Positives = 158/315 (50%), Gaps = 38/315 (12%)

Query: 56  QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ----NLSFKLTDNKFA 111
            S+E ++  W   ++R YG  +E   R  ++  N++ I+  N +      SF +  N F 
Sbjct: 6   HSLEAQWTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFG 64

Query: 112 DLSNEEFISTYLGY--NKPYNEPRWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAF 169
           D+++EEF     G+   KP     +    +   P SVDWR++G VTPVK+QGQCGSCWAF
Sbjct: 65  DMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAF 124

Query: 170 SAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNGGYMEKAFEFITKIGGVTTEDD 229
           SA  A+EG    KTG+L+SLSEQ LVDC     N+GCNGG M+ AF+++   GG+ +E+ 
Sbjct: 125 SATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEES 184

Query: 230 YPYRGKNDRCQTDKTKHHAV-----------------------TITGYEAIPARYAFQLY 266
           YPY    + C+ +     A                             +A    + F   
Sbjct: 185 YPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKE 244

Query: 267 SHGVFDEYCGHQLNHGVTVVGYGEDH----GEKYWLVKNSWGTSWGEAGYIRMARNSPSS 322
                 +     ++HGV VVGYG +       KYWLVKNSWG  WG  GY++MA++    
Sbjct: 245 GIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR-- 302

Query: 323 NIGICGILMQASYPV 337
               CGI   ASYP 
Sbjct: 303 --NHCGIASAASYPT 315
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query340
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.69
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.6
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 93.52
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 93.18
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-76  Score=554.82  Aligned_cols=278  Identities=42%  Similarity=0.832  Sum_probs=238.7

Q ss_pred             hhhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---C-CceEEEcccCCCCCHHHHHHhhcCCCCCCC
Q 041120           55 PQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ---N-LSFKLTDNKFADLSNEEFISTYLGYNKPYN  130 (340)
Q Consensus        55 ~~~~~~~f~~w~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~-~s~~~g~N~FsDlt~eEf~~~~~g~~~~~~  130 (340)
                      +..++++|++|+++|+|+|.+ +|+.+|++||++|+++|++||++   + .+|++|+|+|+|||.|||.+++++...+..
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            567888999999999999976 57899999999999999999985   3 689999999999999999999876554332


Q ss_pred             CC--CCCCCCCCCCCCeeeccCCCCCCccCCCCCCCchHHHHHHHHHHHHHHHHcCCccccChhHhhhccCCCCCCCCCC
Q 041120          131 EP--RWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSENQGCNG  208 (340)
Q Consensus       131 ~~--~~~~~~~~~lP~~~Dwr~~g~vtpV~nQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~~gC~G  208 (340)
                      ..  ........+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+...++.+|.|
T Consensus        84 ~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~c~g  163 (316)
T d1cs8a_          84 RKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG  163 (316)
T ss_dssp             SCCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGC
T ss_pred             ccCccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCCCCC
Confidence            11  1223334689999999999999999999999999999999999999999999999999999999997666889999


Q ss_pred             CchHHHHHHHHHhCCCCCCCCCCCCCCCCCcCCCCCCceeEEeceeEEcCCC----------------------cccccc
Q 041120          209 GYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTKHHAVTITGYEAIPAR----------------------YAFQLY  266 (340)
Q Consensus       209 G~~~~a~~~i~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~~i~~y~~~~~~----------------------~~f~~y  266 (340)
                      |++..|++|+..+|++.+|+.|||.+....|.... ......+..+......                      .+|+.|
T Consensus       164 g~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gpv~v~i~~~~~~f~~y  242 (316)
T d1cs8a_         164 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFY  242 (316)
T ss_dssp             BCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHHHTE
T ss_pred             CchHHHHHHHHhcCccccccccccccccccccccc-ccccccccccccccCcHHHHHHHHHHhCCeEEEEEeccchhccc
Confidence            99999999999997788999999999888887652 3334444445444332                      569999


Q ss_pred             cCceecCC-CC-CCCCeEEEEEEEeec----CCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCcccceeecceeeee
Q 041120          267 SHGVFDEY-CG-HQLNHGVTVVGYGED----HGEKYWLVKNSWGTSWGEAGYIRMARNSPSSNIGICGILMQASYPVK  338 (340)
Q Consensus       267 ~~Gi~~~~-c~-~~~~Hav~iVGyg~~----~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~~Cgi~~~~~yp~~  338 (340)
                      ++|||..+ |+ ..++|||+|||||.+    +|.+|||||||||++|||+|||||+|+..|    +|||++.++||+|
T Consensus       243 ~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n----~CGI~~~~~yP~v  316 (316)
T d1cs8a_         243 KEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRN----HCGIASAASYPTV  316 (316)
T ss_dssp             EEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSS----GGGTTTSCEEECC
T ss_pred             cCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCCC----cCccCCeeeeeeC
Confidence            99999876 76 468999999999975    688999999999999999999999998644    5999999999986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure