Citrus Sinensis ID: 041151

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460---
MAPKALDYESMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLLFHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQYEDYRGYSRM
ccccccccccHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccEEEccccHHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHccEEEEEHHHHHHHHcccccccccHHHHHHHcccccccccEEEEEEcccccccccccccCEEEEECcccHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCEEEcccccccHHHHHHHHHcccccHHHHHHHHHHHcccEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccc
****ALDYESMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLLFHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQY*********
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MAPKALDYESMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVVLLFHTTWKRQQIGVLIINDLQQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILRFCYQENLVLLGDEVYQQNIYQDERPFVSSKKVLMDMGLPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKIASIALSPNVPAQIFMGLMVNPLKPGDISYEQFVRESKGILESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRAGKVPDVFYCLRLLEATGISTVPGSGFGQKEGIFHLRTTILPAEEDMPAIMESFKKFNDEFMEQYEDYRGYSRM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Glutamate--glyoxylate aminotransferase 2 Catalyzes the Glu:glyoxylate aminotransferase (GGT), Ala:glyoxylate aminotransferase (AGT), Ala:2-oxoglutarate aminotransferase (AKT) and Glu:pyruvate aminotransferase (GPT) reactions in peroxisomes.confidentQ9S7E9
Alanine aminotransferase 2 Catalyzes the reversible transamination between alanine and 2-oxoglutarate to form pyruvate and glutamate.probableQ8BGT5
Glutamate--glyoxylate aminotransferase 1 Catalyzes the glutamate:glyoxylate (GGT or GGAT), alanine:glyoxylate (AGT), alanine:2-oxoglutarate (AKT) and glutamate:pyruvate (GPT) aminotransferase reactions in peroxisomes. Required for abscisic acid (ABA)- and stress-mediated responses in an H(2)O(2)-dependent manner. Function as a photorespiratory aminotransferase that modulates amino acid content during photorespiration (GGAT activity); promotes serine, glycine and citrulline metabolism in response to light.probableQ9LR30

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.6.-.-Transferring nitrogenous groups.probable
2.6.1.-Transaminases (aminotransferases).probable
2.6.1.2Alanine transaminase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TCM, chain A
Confidence level:very confident
Coverage over the Query: 4-455
View the alignment between query and template
View the model in PyMOL