Citrus Sinensis ID: 041276

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MAQAYDHDRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFRRT
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEccccHHHcHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccEEEccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEEEEccEccHHHHHHcccHHHHHHHHHHccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHHHcccccccc
Coil and Loop (DISEMBL)
maqaydhdrqdrwslQGMTALVTggtkglgneAELNECLREWKTKCFkvtgsvcdasSRAEREKLMKQVSSLFNGKLNILINnvgtnyttkptVEYMAEDLSFLMSTNFESAYHLSQLAHPllkasgagniILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACewardnirinsvapwfittpltepylsdekfleevkcrtpmerpgepkeVSSLVAFLCmpaasyitgqticvdggftvngfffrrt
Flexible Loop (DISEMBL)
maqaydhdrqdrwslqGMTALVTggtkglgnEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINsvapwfittpltepylsdekFLEEVKCRTpmerpgepkevSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFRRT
Low Complexity Region (SEG)
MAQAYDHDRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFRRT
Disordered region (IsUnstruct)
************WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA********LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC*************SSLVAFLCMPAASYITGQTICVDGGFTVNGFFF***
Disordered Region (DISOPRED)
**************LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR**
Disordered Region (DISEMBL)
***********RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT**********VSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFRRT
Disordered Region (DISPRO)
*************SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQAYDHDRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFRRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q9ASX2	266	Tropinone reductase homol	no	no	0.956	0.902	0.636	8e-90
P50165	268	Tropinone reductase homol	N/A	no	0.944	0.884	0.553	4e-78
P50162	273	Tropinone reductase 1 OS=	N/A	no	0.944	0.868	0.513	2e-71
P50164	260	Tropinone reductase 2 OS=	N/A	no	0.936	0.903	0.503	5e-68
P50163	260	Tropinone reductase 2 OS=	N/A	no	0.932	0.9	0.507	2e-67
P50199	256	Gluconate 5-dehydrogenase	yes	no	0.916	0.898	0.305	4e-27
Q9X248	246	3-oxoacyl-[acyl-carrier-p	no	no	0.896	0.914	0.302	1e-26
P51831	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.888	0.906	0.322	2e-25
P50842	254	2-dehydro-3-deoxy-D-gluco	no	no	0.920	0.909	0.294	8e-24
P94681	252	4-formylbenzenesulfonate	yes	no	0.912	0.908	0.305	2e-23

>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1

 Score =  330 bits (845), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 166/261 (63%), Positives = 196/261 (75%), Gaps = 21/261 (8%)

Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
           ++  RWSL+  T LVTGGTKG+G                   NE ELNECL +W+ K F+
Sbjct: 5   EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           VTGSVCDAS R EREKLM+ VSS+F GKL+ILINN+G    +KPT++Y AED SF +STN
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA-IRSKPTLDYTAEDFSFHISTN 123

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
            ESAYHLSQLAHPLLKASG GNII +SS+ GV+S ++G+IY+ATKGA+NQLA+NLACEWA
Sbjct: 124 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 183

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            D IR N+VAP  I TPL E    DE F + V  R P+ R GEP+EVSSLVAFLCMPAAS
Sbjct: 184 SDGIRANAVAPAVIATPLAEAVYDDE-FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 242

Query: 229 YITGQTICVDGGFTVNGFFFR 249
           YITGQTICVDGG TVNGF ++
Sbjct: 243 YITGQTICVDGGLTVNGFSYQ 263

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1

 Score =  291 bits (744), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/262 (55%), Positives = 187/262 (71%), Gaps = 25/262 (9%)

Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
           DR  RWSL+GMTALVTGGT+G+G                   ++ +L+ECL +W+ K FK
Sbjct: 10  DR--RWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFK 67

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           V+G VCD SS ++R+ LM+ V+S FNGKLNILINN GT    + T  + AED S +M TN
Sbjct: 68  VSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEAT-NFTAEDYSIIMGTN 126

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           FE++Y+L QLAHPLLKASG  +I+  SS  GV++  L +IYAA+KGA+NQ+ K+LACEWA
Sbjct: 127 FEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWA 186

Query: 169 RDNIRINSVAPWFITTPLTEPYL---SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           +D+IR+N+VAPW I TP+ E      S +K +E +  R PM+R GEP EVSSLV +LC+P
Sbjct: 187 KDSIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLP 246

Query: 226 AASYITGQTICVDGGFTVNGFF 247
            ASYITGQ ICVDGG+TVNGF 
Sbjct: 247 TASYITGQIICVDGGYTVNGFI 268

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1

 Score =  268 bits (686), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 136/265 (51%), Positives = 179/265 (67%), Gaps = 28/265 (10%)

Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
           + + RWSL+G TALVTGG+KG+G                   NE EL+ECL  W+ K   
Sbjct: 12  NNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           V GSVCD  SR ER+KLM+ V+ +F+GKLNIL+NN G     K   ++  +D + +M TN
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTN 130

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           FE+AYHLSQ+A+PLLKAS  GN+I +SS+ G  +    ++Y+A+KGA+NQ+ K+LACEWA
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190

Query: 169 RDNIRINSVAPWFITTPLTE------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
           +DNIR+NSVAP  I TPL E      P+  +E  ++    +TPM R G+P+EVS+L+AFL
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEE--IDNFIVKTPMGRAGKPQEVSALIAFL 248

Query: 223 CMPAASYITGQTICVDGGFTVNGFF 247
           C PAASYITGQ I  DGGFT NG F
Sbjct: 249 CFPAASYITGQIIWADGGFTANGGF 273

Catalyzes the stereospecific reduction of tropinone to tropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1

 Score =  257 bits (657), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 130/258 (50%), Positives = 171/258 (66%), Gaps = 23/258 (8%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RW+L+G TALVTGG++G+G                   N+ EL+ECL +W++K F V  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEAS 63

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD SSR+ERE+ MK VS+ F+GKLNIL+NN G     K   +Y  ED S +MS NFE+A
Sbjct: 64  VCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGI-VIYKEAKDYTMEDYSHIMSINFEAA 122

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLS LAHP LKAS  GN++ +SS+ G  +     +Y ATKGAM+QL + LA EWA+DNI
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

Query: 173 RINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           R+N V P  I T + E  + D   ++ L+++  R  + R GEPKE++++VAFLC PAASY
Sbjct: 183 RVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASY 242

Query: 230 ITGQTICVDGGFTVNGFF 247
           +TGQ I VDGGF  NG F
Sbjct: 243 VTGQIIYVDGGFMANGGF 260

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Hyoscyamus niger (taxid: 4079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1

 Score =  255 bits (652), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 131/258 (50%), Positives = 171/258 (66%), Gaps = 24/258 (9%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RW+L+G TALVTGG++G+G                   N+ ELN+CL +W++K FKV  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD SSR+ER++LM  V++ F+GKLNIL+NN G     K   +Y  ED S +MS NFE+A
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAA 122

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLS LAHP LKAS  GN++ +SSV G L+     +Y ATKGAM+QL + LA EWA+DNI
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

Query: 173 RINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           R+N V P  I T L E  + D   ++ L ++  R  + R GEPKE++++VAFLC PAASY
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 242

Query: 230 ITGQTICVDGGFTVN-GF 246
           +TGQ I VDGG   N GF
Sbjct: 243 VTGQIIYVDGGLMANCGF 260

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50199|GNO_GLUOX Gluconate 5-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=gno PE=1 SV=1

 Score =  121 bits (304), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 25/255 (9%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           D +SL G  ALVTG ++G+G                   N   L+     ++ +  K + 
Sbjct: 5   DLFSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKAST 64

Query: 52  SVCDASSRAEREKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
           +V D +   +++ ++  V+++    G ++ILINN G      P  E+  +D   LMSTN 
Sbjct: 65  AVFDVT---DQDAVIDGVAAIERDMGPIDILINNAGIQRRA-PLEEFSRKDWDDLMSTNV 120

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            + + + Q     +   G G I+ + SV   L+      Y ATKGA+  L K +A +W R
Sbjct: 121 NAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGR 180

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             ++IN +AP +  T +TE  ++DE+F + +  RTP  R G+ +E+     FL   A+S+
Sbjct: 181 HGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTPAGRWGQVEELVGAAVFLSSRASSF 240

Query: 230 ITGQTICVDGGFTVN 244
           + GQ + VDGG TV+
Sbjct: 241 VNGQVLMVDGGITVS 255

Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD.

Gluconobacter oxydans (strain 621H) (taxid: 290633)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 128/248 (51%), Gaps = 23/248 (9%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G   L+TG   G+G                   ++  L+  ++E +    KV   V +
Sbjct: 3   LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLN 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + R + ++++++V   + G++++L+NN G        V    ED   +++ N +  +++
Sbjct: 63  VTDRDQIKEVVEKVVQKY-GRIDVLVNNAGITRDAL-LVRMKEEDWDAVINVNLKGVFNV 120

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +Q+  P +     G+I+ VSSV G+      T YAA+K  +  + K  A E A  NIR+N
Sbjct: 121 TQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVN 180

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +VAP FI TP+TE     EK  E    R P+ R G+P+EV+ ++ FL    +SY+TGQ I
Sbjct: 181 AVAPGFIETPMTEKL--PEKARETALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVI 238

Query: 236 CVDGGFTV 243
            +DGG  +
Sbjct: 239 GIDGGLVI 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 28/251 (11%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L   TA+VTG ++G+G                    NEA+ NE + E K+   K      
Sbjct: 2   LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKA 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESAY 113
           D S+  + + ++K+  S+F+  ++IL+NN G   T    +  M ED    +++ N +  +
Sbjct: 62  DVSNPEDVQNMIKETLSVFS-TIDILVNNAG--ITRDNLIMRMKEDEWDDVININLKGVF 118

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNI 172
           + ++     +    +G II VSS+ GV S N G   Y A K  +  L K+ A E A  NI
Sbjct: 119 NCTKAVTRQMMKQRSGRIINVSSIVGV-SGNPGQANYVAAKAGVIGLTKSSAKELASRNI 177

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N++AP FI+T +T+    D +  +E+  + P+ R GEP +VSS+V FL    A Y+TG
Sbjct: 178 TVNAIAPGFISTDMTDKLAKDVQ--DEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTG 235

Query: 233 QTICVDGGFTV 243
           QT+ +DGG  +
Sbjct: 236 QTLHIDGGMVM 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P50842|KDUD_BACSU 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis (strain 168) GN=kduD PE=2 SV=1

 Score =  110 bits (276), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 17/248 (6%)

Query: 10  QDRWSLQGMTALVTGGTKGLGN------EAELNECLREWKTKCFKVTGSVCDASSR---- 59
            D +SL+G TALVTG   G+G            + +    T     T  + +   R    
Sbjct: 5   HDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSETQQLVEQEGRIFTS 64

Query: 60  -----AEREKLMKQVSSLF-NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
                ++ E +    + LF N +++IL+NN G  +  K   ++  E+   +++ N  S +
Sbjct: 65  FTLDMSKPEAIKDSAAELFENRQIDILVNNAGIIHREKAE-DFPEENWQHVLNVNLNSLF 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            L+QLA   +   G G II ++S+       L   Y A+K A+  L K+ A EWA   I+
Sbjct: 124 ILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQ 183

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++AP +I+T  T+P   DEK  E++  R P  R G+  ++     FL   A+ Y+ G 
Sbjct: 184 VNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGH 243

Query: 234 TICVDGGF 241
            + VDGG+
Sbjct: 244 ILAVDGGW 251

Catalyzes the reduction of 2,5-diketo-3-deoxygluconate (DKII or 4,6-dihydroxy-2,5-dioxohexanoate) into 2-keto-3-deoxygluconate (KDG or 2-dehydro-3-deoxygluconate) with a concomitant oxidation of NADH.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 2

EC: 7

>sp|P94681|TSAC_COMTE 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 OS=Comamonas testosteroni GN=tsaC1 PE=1 SV=1

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 23/252 (9%)

Query: 14  SLQGMTALVTGGTKGLGNE--------------AELN-----ECLREWKTKCFKVTGSVC 54
           +L    A+VTGG  G G                A+LN         E      +  G  C
Sbjct: 2   NLNKQVAIVTGGASGFGAAIARRLSQAGAAVLVADLNAEGAQRMATELNAAGGRALGMAC 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  A+   ++    +   G L+I++NN GT +  KP +    ++   +   N +S Y 
Sbjct: 62  DVSKEADYRAVVDAAIAQLGG-LHIVVNNAGTTHRNKPALAVTEDEFDRVYRVNLKSVYW 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            +Q A P     G G ++ V+S  GV      T Y+ +K AM  L K LA E+AR  +RI
Sbjct: 121 SAQCALPHFAQQGHGVMVNVASTTGVRPGPGLTWYSGSKAAMINLTKGLALEFARSGVRI 180

Query: 175 NSVAPWFITTPLTEPYLSDEKF---LEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           N+V P    TP+   ++  E      E    R P+ R   P +V+S VAFL    AS++T
Sbjct: 181 NAVNPMIGETPMMADFMGMEDTPANRERFLSRIPLGRFTRPDDVASAVAFLASDDASFLT 240

Query: 232 GQTICVDGGFTV 243
           G  + VDGG  +
Sbjct: 241 GVCLDVDGGRNI 252

Involved in the toluene-4-sulfonate degradation pathway. Does not discriminate between the sulfonate and the carboxyl substituents and can also be involved in the p-toluenecarboxylate degradation pathway.

Comamonas testosteroni (taxid: 285)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 6

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
158828210	269	TRL10 [Cleome spinosa]	0.984	0.918	0.686	1e-99
255558968	268	tropinone reductase, putative [Ricinus c	0.976	0.914	0.684	4e-98
158828209	280	TRL11 [Cleome spinosa]	0.984	0.882	0.652	2e-95
3980415	268	putative tropinone reductase [Arabidopsi	0.976	0.914	0.650	4e-93
225449410	268	PREDICTED: tropinone reductase homolog A	0.976	0.914	0.645	9e-93
158578532	293	tropinone-reductase-like protein [Boeche	0.952	0.815	0.644	3e-91
225449408	268	PREDICTED: tropinone reductase homolog A	0.980	0.917	0.624	3e-91
359478910	270	PREDICTED: tropinone reductase homolog A	0.976	0.907	0.620	9e-91
147769646	270	hypothetical protein VITISV_035429 [Viti	0.976	0.907	0.635	1e-90
158828187	271	tropinone-reductase-like53 [Arabidopsis	0.984	0.911	0.634	2e-90

>gi|158828210|gb|ABW81088.1| TRL10 [Cleome spinosa]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 184/268 (68%), Positives = 207/268 (77%), Gaps = 21/268 (7%)

Query: 1   MAQAYDHDRQD-RWSLQGMTALVTGGTKGLGNEA-------------------ELNECLR 40
           MA+A +  RQ+ RWSLQG TALVTGGTKGLG                       LN+CLR
Sbjct: 1   MAKAEESIRQNSRWSLQGKTALVTGGTKGLGEAVVEELAGFGARIHTCARDGDHLNKCLR 60

Query: 41  EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED 100
           EW+ K F+VTGSVCD S R EREKLM+ VSSLFNG+LNILINNVGTN T KPT EY AED
Sbjct: 61  EWQAKGFQVTGSVCDVSLRTEREKLMETVSSLFNGELNILINNVGTNMT-KPTTEYTAED 119

Query: 101 LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            SFLM+TNFES+YHL QL+HPLLKASG+G+I+ +SSVCGV+S N+G+IY ATKGAMNQL 
Sbjct: 120 FSFLMATNFESSYHLCQLSHPLLKASGSGSIVFMSSVCGVVSINVGSIYGATKGAMNQLT 179

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           +NLACEWA DNIR NSV PWFI+TPL   YL DEKF E V  R P+ R GEP+EVSSLV 
Sbjct: 180 RNLACEWASDNIRANSVCPWFISTPLAYRYLEDEKFKEAVVSRNPIRRVGEPEEVSSLVT 239

Query: 221 FLCMPAASYITGQTICVDGGFTVNGFFF 248
           FLC+PAASYITGQTICVDGG TVNGF F
Sbjct: 240 FLCLPAASYITGQTICVDGGMTVNGFSF 267

Source: Cleome spinosa

Species: Cleome spinosa

Genus: Cleome

Family: Cleomaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558968|ref|XP_002520507.1| tropinone reductase, putative [Ricinus communis] gi|223540349|gb|EEF41920.1| tropinone reductase, putative [Ricinus communis]

 Score =  363 bits (932), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 182/266 (68%), Positives = 205/266 (77%), Gaps = 21/266 (7%)

Query: 6   DHDRQD-RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK 45
           +  R+D RWSL+GMTALVTGGTKG+G                   NE +LNEC+ +WK K
Sbjct: 2   ESSRKDSRWSLEGMTALVTGGTKGIGHAIVEELAGLGAEVYTCSRNEVQLNECIHKWKAK 61

Query: 46  CFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLM 105
            FKVTGSVCD SSRA RE LM ++SSLFN KLNILINNVGTN   KPTV+Y AED S+L+
Sbjct: 62  GFKVTGSVCDVSSRANREDLMNRISSLFNRKLNILINNVGTNIG-KPTVKYTAEDFSYLV 120

Query: 106 STNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLAC 165
           +TNFESAYHLSQLA PLLK SGAG+I+ +SSV GVLS N+GTIY ATK AMNQL KNLAC
Sbjct: 121 NTNFESAYHLSQLAQPLLKGSGAGSIVFMSSVSGVLSVNVGTIYGATKAAMNQLTKNLAC 180

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           EWA+DNIR N VAPWFI TPLTE  L+ E+F   +  RTPM R GE +EVSSLVAFLC+P
Sbjct: 181 EWAKDNIRTNCVAPWFIRTPLTEQDLNHERFSNSIAARTPMGRVGEAEEVSSLVAFLCLP 240

Query: 226 AASYITGQTICVDGGFTVNGFFFRRT 251
           AASYITGQTICVDGG TVNGFFF  T
Sbjct: 241 AASYITGQTICVDGGMTVNGFFFPTT 266

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828209|gb|ABW81087.1| TRL11 [Cleome spinosa]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 182/279 (65%), Positives = 206/279 (73%), Gaps = 32/279 (11%)

Query: 1   MAQAYDHDRQD-RWSLQGMTALVTGGTKGLGNEA-------------------ELNECLR 40
           MA+A +  RQ+ RWSLQG TALVTGGTKGLG                       LN+CLR
Sbjct: 1   MAKAEESIRQNSRWSLQGKTALVTGGTKGLGEAVVEELAGFGARIHTCARDGDHLNKCLR 60

Query: 41  EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL-----------INNVGTNYT 89
           EW+ K F+VTGSVCD S R EREKLM+ VSSLFNG+LNIL           INNVGTN  
Sbjct: 61  EWQAKGFQVTGSVCDVSLRTEREKLMETVSSLFNGELNILVMNRIDFVVEQINNVGTNIW 120

Query: 90  TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY 149
            KPT EY AED SFLM+TNFES+YHL QL+HPLLKASG+G+I+ +SSVCGV+S N+G+IY
Sbjct: 121 -KPTTEYTAEDFSFLMTTNFESSYHLCQLSHPLLKASGSGSIVFMSSVCGVVSVNVGSIY 179

Query: 150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP 209
            ATKGAMNQL +NLACEWA DNIR NSV PWFI+TPL    L DEKF E V  R+P+ R 
Sbjct: 180 GATKGAMNQLTRNLACEWASDNIRANSVCPWFISTPLVYRALEDEKFKEAVVSRSPISRV 239

Query: 210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFF 248
           GEP+EVSSLV FLC+PAASYITGQTICVDGG TVNGF F
Sbjct: 240 GEPEEVSSLVTFLCLPAASYITGQTICVDGGMTVNGFSF 278

Source: Cleome spinosa

Species: Cleome spinosa

Genus: Cleome

Family: Cleomaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3980415|gb|AAC95218.1| putative tropinone reductase [Arabidopsis thaliana]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 175/269 (65%), Positives = 206/269 (76%), Gaps = 24/269 (8%)

Query: 1   MAQAYDHDRQD-RWSLQGMTALVTGGTKGLG-------------------NEAELNECLR 40
           MA+A ++ R   RWSL GMTALVTGG+KGLG                   NE +L EC+R
Sbjct: 1   MAKAEENLRDKCRWSLGGMTALVTGGSKGLGEAVVEELAMLGARVHTCARNETQLQECVR 60

Query: 41  EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED 100
           EW+ K F+VT SVCD SSR +REKLM+ V+S+F GKLNIL+NN GT  T KPT EY A+D
Sbjct: 61  EWQAKGFEVTTSVCDVSSRDQREKLMENVASIFQGKLNILVNNAGTGIT-KPTTEYTAQD 119

Query: 101 LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            SFLM+TN +SA+HLSQLAHPLLKASG+G+I+L+SS  GV+  N+G+IY ATKGAMNQLA
Sbjct: 120 YSFLMATNLDSAFHLSQLAHPLLKASGSGSIVLMSSTAGVVHINVGSIYGATKGAMNQLA 179

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           KNLACEWARDNIR+NSV PWFI TPL   YL+DE+  +EV+ +TPM R G   EVSSLVA
Sbjct: 180 KNLACEWARDNIRVNSVCPWFIATPL---YLNDEELKKEVERKTPMGRVGNANEVSSLVA 236

Query: 221 FLCMPAASYITGQTICVDGGFTVNGFFFR 249
           FLC PAASYITGQTICVDGGFTVN F F+
Sbjct: 237 FLCFPAASYITGQTICVDGGFTVNCFSFK 265

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449410|ref|XP_002277835.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|296086189|emb|CBI31630.3| unnamed protein product [Vitis vinifera]

 Score =  345 bits (885), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 171/265 (64%), Positives = 197/265 (74%), Gaps = 20/265 (7%)

Query: 1   MAQAYDHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLRE 41
           MA+         WSL+G TALVTGGT+G+G                   NEAEL++CLRE
Sbjct: 1   MAEGNGGFSSSGWSLRGTTALVTGGTRGIGYAVVEELAGLGSTVHTCSRNEAELDKCLRE 60

Query: 42  WKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL 101
           W  K F VTGSVCD S RA+RE+LM++VSS+FNGKLNILINNVGTN   KPTV++ A + 
Sbjct: 61  WHAKGFAVTGSVCDGSDRAQREQLMEKVSSIFNGKLNILINNVGTNIR-KPTVDFTAAEY 119

Query: 102 SFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           S +M+TN ESAYHL QLAHPLLKASGAG+I+ +SSV GVLS   G+IYAATK AMNQL K
Sbjct: 120 STIMTTNLESAYHLCQLAHPLLKASGAGSIVFISSVAGVLSLGTGSIYAATKAAMNQLTK 179

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           NL+CEWA+DNIR NSVAPW+I T L E  L  + F E V  RTP+ RPGEPKEVSSLVAF
Sbjct: 180 NLSCEWAKDNIRSNSVAPWYIKTSLVEHLLQKQDFFESVISRTPLRRPGEPKEVSSLVAF 239

Query: 222 LCMPAASYITGQTICVDGGFTVNGF 246
           LC+P ASYITGQ ICVDGG TVNGF
Sbjct: 240 LCLPVASYITGQVICVDGGMTVNGF 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158578532|gb|ABW74557.1| tropinone-reductase-like protein [Boechera divaricarpa]

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/259 (64%), Positives = 196/259 (75%), Gaps = 20/259 (7%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
           + RW L GMTALVTGG+KGLG                   +E +L E LREW+ K F++T
Sbjct: 33  KSRWRLGGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQESLREWQAKGFQIT 92

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
            SVCD SSR +REKLM+ VSSLF GKLNIL+NN GT   TKPT EY A+D SFLM+TN E
Sbjct: 93  TSVCDVSSRDQREKLMETVSSLFQGKLNILVNNAGT-CITKPTTEYTAQDYSFLMATNLE 151

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           SA+HLSQLAHPLLKAS +G+I+L+SS  GV+  N+ +IY ATKGAMNQLAKNLACEWA D
Sbjct: 152 SAFHLSQLAHPLLKASVSGSIVLMSSAAGVMHINVSSIYGATKGAMNQLAKNLACEWASD 211

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           NIR+NSV PWFI TPL   Y++DE+F + V+ +TPM R G+  EVSSLVAFLC PAASYI
Sbjct: 212 NIRVNSVCPWFIATPLANNYINDEEFKKAVESKTPMGRVGKANEVSSLVAFLCFPAASYI 271

Query: 231 TGQTICVDGGFTVNGFFFR 249
           TGQTICVDGG TVNGF F+
Sbjct: 272 TGQTICVDGGATVNGFSFK 290

Source: Boechera divaricarpa

Species: Boechera divaricarpa

Genus: Boechera

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449408|ref|XP_002282755.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|296086188|emb|CBI31629.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/266 (62%), Positives = 198/266 (74%), Gaps = 20/266 (7%)

Query: 1   MAQAYDHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLRE 41
           MA++        WSL+G TALVTGGT+G+G                   NEAEL++CLRE
Sbjct: 1   MAESNGSFGGSGWSLRGTTALVTGGTRGIGYAVVEELAGLGATVHTCSRNEAELDKCLRE 60

Query: 42  WKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL 101
           W  K F VT S+CD S RA+REKLM++VSS+FNGKLNIL+NNVGT++  KPTV+Y A + 
Sbjct: 61  WHAKGFSVTASICDGSDRAQREKLMEKVSSIFNGKLNILVNNVGTSFR-KPTVDYTAAEY 119

Query: 102 SFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           S +M+TN ESAYHL QLAHPLLKASGAG+I+ VSSV GV+S   G+IYAATK A+NQL K
Sbjct: 120 STIMTTNLESAYHLCQLAHPLLKASGAGSIVFVSSVAGVVSLGTGSIYAATKAAINQLTK 179

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           N ACEWA+DNIR NSVAPW+I T L E  L  + F E +  RTP+ RPGEPKEV+SLVAF
Sbjct: 180 NFACEWAKDNIRSNSVAPWYIKTSLVEHLLQKKDFFEGIVSRTPLGRPGEPKEVASLVAF 239

Query: 222 LCMPAASYITGQTICVDGGFTVNGFF 247
           LC+P ASYITGQ ICVDGG TVNGF+
Sbjct: 240 LCLPVASYITGQVICVDGGMTVNGFY 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478910|ref|XP_003632186.1| PREDICTED: tropinone reductase homolog At1g07440-like [Vitis vinifera] gi|297746015|emb|CBI16071.3| unnamed protein product [Vitis vinifera]

 Score =  338 bits (868), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 165/266 (62%), Positives = 200/266 (75%), Gaps = 21/266 (7%)

Query: 1   MAQAYDHDRQD-RWSLQGMTALVTGGTKGLGN-------------------EAELNECLR 40
           MAQ       D RWSL+GMTALVTGGTKG+G+                   E ELNECL+
Sbjct: 1   MAQTSGCSSGDSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLK 60

Query: 41  EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED 100
           +WK K F V+GSVCD SSRA+REKLM+ +SS+FNGKLNILINN   +   KPT+E  AE+
Sbjct: 61  DWKAKGFGVSGSVCDVSSRAQREKLMQTISSVFNGKLNILINNAAISIQ-KPTIEVTAEE 119

Query: 101 LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            S +M+TNFES YHLSQ+AHPLLKASGAG+I+ +SSV G+++    + Y+ TKGAMNQL 
Sbjct: 120 FSTIMATNFESVYHLSQIAHPLLKASGAGSIVFISSVSGIVAHKNISAYSVTKGAMNQLT 179

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           KNLACEWA+DNIR N+VAPW+I TP+ E  L+++ FLEEV  R P+ R G+PKEVSSLVA
Sbjct: 180 KNLACEWAKDNIRSNAVAPWYIKTPMVEQMLTNQAFLEEVINRAPLRRVGDPKEVSSLVA 239

Query: 221 FLCMPAASYITGQTICVDGGFTVNGF 246
           FLC+PA+SYITGQ ICVDGG TVNGF
Sbjct: 240 FLCLPASSYITGQIICVDGGMTVNGF 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769646|emb|CAN63543.1| hypothetical protein VITISV_035429 [Vitis vinifera]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 169/266 (63%), Positives = 198/266 (74%), Gaps = 21/266 (7%)

Query: 1   MAQAYDHDRQD-RWSLQGMTALVTGGTKGLGN-------------------EAELNECLR 40
           MAQ       D RWSL+GMTALVTGGTKG+G+                   E ELNECL+
Sbjct: 1   MAQTCGXSSGDSRWSLKGMTALVTGGTKGIGHAIVEELAGLGAAIHTCSRKETELNECLK 60

Query: 41  EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED 100
           +WK K F V+GSVCD SSRA+REKLM+ VSS+FNGKLNIL+NN       KPTVE  AE+
Sbjct: 61  DWKAKGFGVSGSVCDVSSRAQREKLMETVSSVFNGKLNILVNNAAI-VIQKPTVEVTAEE 119

Query: 101 LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            S +M+ NFES YHLSQLAHPLLKASGAG+I+ +SSV GV+S    + Y+ATKGAMNQL 
Sbjct: 120 FSTIMAINFESVYHLSQLAHPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLT 179

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           KNLACEWA DNIR N+VAPW+I TP+ +  LS++ FLE V  R P+ R G+PKEVSSLVA
Sbjct: 180 KNLACEWAEDNIRSNAVAPWYIKTPMVDQMLSNKTFLEXVINRAPLRRVGDPKEVSSLVA 239

Query: 221 FLCMPAASYITGQTICVDGGFTVNGF 246
           FLC+PA+SYITGQTICVDGG TVNGF
Sbjct: 240 FLCLPASSYITGQTICVDGGVTVNGF 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158828187|gb|ABW81066.1| tropinone-reductase-like53 [Arabidopsis lyrata subsp. lyrata]

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 170/268 (63%), Positives = 201/268 (75%), Gaps = 21/268 (7%)

Query: 1   MAQAYDHDRQD-RWSLQGMTALVTGGTKGLG-------------------NEAELNECLR 40
           MA+  ++ R + RWSL GMTALVTGG+KGLG                   +E +L E LR
Sbjct: 1   MAKTEENFRDNSRWSLGGMTALVTGGSKGLGKAMVEELAMLGARVHTCARDETQLQERLR 60

Query: 41  EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED 100
           EW+ K F+VT SVCD SSR +REKLM+ VSS+F GKLNIL+NNVGT   TKPT ++  +D
Sbjct: 61  EWQAKGFQVTTSVCDVSSRDQREKLMETVSSIFQGKLNILVNNVGT-CITKPTTKFTEQD 119

Query: 101 LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            SFLM+TN ES +HLSQLAHPLLKAS +G+I+L+SS  GV+  N+G+IY ATKGAMNQLA
Sbjct: 120 YSFLMATNLESTFHLSQLAHPLLKASRSGSIVLMSSAAGVVHINVGSIYGATKGAMNQLA 179

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           KNLACEWA DNIR+NSV PWFI TPL   YL DE+  +EV+ +TPM R G+  EVSSLVA
Sbjct: 180 KNLACEWASDNIRVNSVCPWFIATPLANNYLDDEELKKEVESKTPMGRAGKANEVSSLVA 239

Query: 221 FLCMPAASYITGQTICVDGGFTVNGFFF 248
           FLC PAASYITGQTICVDGG TVNGF F
Sbjct: 240 FLCFPAASYITGQTICVDGGATVNGFSF 267

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2043177	269	SAG13 "senescence-associated g	0.864	0.806	0.680	5.7e-84
TAIR|locus:2043167	271	AT2G29360 [Arabidopsis thalian	0.868	0.804	0.675	1.2e-83
TAIR|locus:2043037	268	AT2G29150 [Arabidopsis thalian	0.864	0.809	0.666	1.9e-83
TAIR|locus:2043052	262	AT2G29290 [Arabidopsis thalian	0.868	0.832	0.657	8.3e-83
TAIR|locus:2025072	266	AT1G07440 [Arabidopsis thalian	0.864	0.815	0.694	1.1e-82
TAIR|locus:2042992	260	TRI "tropinone reductase" [Ara	0.852	0.823	0.665	4e-81
TAIR|locus:2043152	268	AT2G29370 [Arabidopsis thalian	0.856	0.802	0.662	1.1e-80
TAIR|locus:2025057	260	AT1G07450 [Arabidopsis thalian	0.864	0.834	0.652	2.2e-80
TAIR|locus:2152815	264	AT5G06060 [Arabidopsis thalian	0.864	0.821	0.646	2.8e-80
TAIR|locus:2054447	262	AT2G30670 [Arabidopsis thalian	0.868	0.832	0.639	3.2e-79

TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 768 (275.4 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
 Identities = 149/219 (68%), Positives = 177/219 (80%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E +L E LREW+ K F+VT SVCD SSR +R KLM+ VSSL+ GKLNIL+NNVGT+   
Sbjct:    50 DETQLQERLREWQAKGFQVTTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIF- 108

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT EY AED SF+M+TN ESA+HLSQLAHPLLKASG+G+I+L+SS  GV+  N+G+IY 
Sbjct:   109 KPTTEYTAEDFSFVMATNLESAFHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYG 168

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
             ATKGAMNQLA+NLACEWA DNIR NSV PW+ITTPL+  +  DE+F +E    TPM R G
Sbjct:   169 ATKGAMNQLARNLACEWASDNIRTNSVCPWYITTPLSNDFF-DEEFKKEAVRTTPMGRVG 227

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             E  EVS LVAFLC+P+ASYITGQTICVDGG TVNGF F+
Sbjct:   228 EANEVSPLVAFLCLPSASYITGQTICVDGGATVNGFSFK 266

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0007568 "aging" evidence=IEP;RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=TAS

GO:0002213 "defense response to insect" evidence=IEP

TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
 Identities = 148/219 (67%), Positives = 177/219 (80%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E +L E LR+W+ K F+VT SVCD SSR +REKLM+ VS++F GKLNIL+NNVGT    
Sbjct:    51 DETQLQESLRKWQAKGFQVTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNNVGT-CIV 109

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT+++ AED SF M+TN ESA+HLSQLAHPLLKASG+G+I+L+SSV GV+  N  +IY 
Sbjct:   110 KPTLQHTAEDFSFTMATNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYG 169

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
              +KGAMNQL +NLACEWA DNIR NSV PWFI TPL    LS+E+F +EV+ R PM R G
Sbjct:   170 VSKGAMNQLGRNLACEWASDNIRTNSVCPWFIETPLVTESLSNEEFRKEVESRPPMGRVG 229

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             E  EVSSLVAFLC+PAASYITGQTICVDGGFTVNGF F+
Sbjct:   230 EVNEVSSLVAFLCLPAASYITGQTICVDGGFTVNGFSFK 268

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0015979 "photosynthesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
 Identities = 146/219 (66%), Positives = 174/219 (79%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E +L E LREW+ K F+VT SVCD SSR +REKLM+ VSS+F GKLNIL+NN GT    
Sbjct:    51 DETQLQERLREWQAKGFEVTTSVCDVSSREQREKLMETVSSVFQGKLNILVNNAGTGII- 109

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KP+ EY AED SFLM+TN ESA+HLSQ+AHPLLKASG+G+I+ +SSV G++ T   +IY 
Sbjct:   110 KPSTEYTAEDYSFLMATNLESAFHLSQIAHPLLKASGSGSIVFMSSVAGLVHTG-ASIYG 168

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
             A+KGAMNQL ++LACEWA DNIR+NSV PW ITTPLT    SDEK  + V+ +TPM R G
Sbjct:   169 ASKGAMNQLGRSLACEWASDNIRVNSVCPWVITTPLTSFIFSDEKLRKAVEDKTPMGRVG 228

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             E  EVSSLVAFLC PAASYITGQTICVDGG +VNGF F+
Sbjct:   229 EANEVSSLVAFLCFPAASYITGQTICVDGGASVNGFSFK 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
 Identities = 144/219 (65%), Positives = 174/219 (79%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E +L E LREW+ K F+VT S+CD S R +REKLM+ VSSLF GKLNIL+NNVGT    
Sbjct:    42 DETQLQERLREWQEKGFQVTTSICDVSLREQREKLMETVSSLFQGKLNILVNNVGT-LML 100

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT EY AE+ SFLM+TN +SA+H+SQLAHPLLKASG+G+I+L+SS+ GV+   +G+IY 
Sbjct:   101 KPTTEYTAEEFSFLMATNLDSAFHISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYG 160

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
             ATKGAMNQLA+NLACEWA DNIR N++ PW ITTPL    LS E+  +E + RTPM R G
Sbjct:   161 ATKGAMNQLARNLACEWASDNIRTNAICPWLITTPLISDLLSVEEMKKEAEERTPMGRVG 220

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             E  EVS LVAFLC+PAASYITGQ ICVDGG TVNGF ++
Sbjct:   221 EANEVSPLVAFLCLPAASYITGQVICVDGGLTVNGFSYQ 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
 Identities = 152/219 (69%), Positives = 178/219 (81%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             NE ELNECL +W+ K F+VTGSVCDAS R EREKLM+ VSS+F GKL+ILINN+G    +
Sbjct:    47 NEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA-IRS 105

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT++Y AED SF +STN ESAYHLSQLAHPLLKASG GNII +SS+ GV+S ++G+IY+
Sbjct:   106 KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS 165

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
             ATKGA+NQLA+NLACEWA D IR N+VAP  I TPL E    DE F + V  R P+ R G
Sbjct:   166 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE-FKKVVISRKPLGRFG 224

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             EP+EVSSLVAFLCMPAASYITGQTICVDGG TVNGF ++
Sbjct:   225 EPEEVSSLVAFLCMPAASYITGQTICVDGGLTVNGFSYQ 263

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
 Identities = 143/215 (66%), Positives = 175/215 (81%)

Query:    35 LNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV 94
             LN+ L EW+ K F+V+GSVCDAS+R ERE LM+ V+++F+GKLNIL+NNVGT   TKPT+
Sbjct:    46 LNQSLSEWEKKGFQVSGSVCDASNRLERETLMQTVTTIFDGKLNILVNNVGT-IRTKPTI 104

Query:    95 EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG 154
             EY AED SFL+STN ESAYHLSQL+HPLLKASG G I  +SS  G++S +  +IY  TKG
Sbjct:   105 EYEAEDFSFLISTNLESAYHLSQLSHPLLKASGNGIITFISSAAGIVSFDAASIYGLTKG 164

Query:   155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKE 214
             A+NQLA+NLACEWA+D IR N+VAP FITT L +P+L D  F E +  RTP+ R GEP+E
Sbjct:   165 ALNQLARNLACEWAKDGIRANAVAPNFITTALAKPFLEDAGFNEILSSRTPLGRAGEPRE 224

Query:   215 VSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             V+SLVAFLC+PAASYITGQTICVDGG TVNGF ++
Sbjct:   225 VASLVAFLCLPAASYITGQTICVDGGLTVNGFSYQ 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
 Identities = 143/216 (66%), Positives = 171/216 (79%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E +L E LREW+ K  +VT SVCD SSR +REKLM+ VSSLF GKL+IL+ NVG     
Sbjct:    51 DETQLQESLREWQAKGLQVTTSVCDVSSRDQREKLMETVSSLFQGKLSILVPNVGIG-VL 109

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT E  AE+ SF+++TN ES +H SQLAHPLLKASG+GNI+L+SSV GV++    +IY 
Sbjct:   110 KPTTECTAEEFSFIIATNLESTFHFSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYG 169

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
             ATKGAMNQLA+NLACEWA DNIR NSV PWFITTP T+ +L D+   E+V+  TP+ R G
Sbjct:   170 ATKGAMNQLARNLACEWASDNIRANSVCPWFITTPSTKDFLGDKDVKEKVESVTPLRRVG 229

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGF 246
             E  EVSSLVAFLC+PAASYITGQTICVDGGFT+NGF
Sbjct:   230 EANEVSSLVAFLCLPAASYITGQTICVDGGFTINGF 265

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2025057 AT1G07450 [Arabidopsis thaliana (taxid:3702)]

 Score = 731 (262.4 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
 Identities = 143/219 (65%), Positives = 169/219 (77%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E  LNECL  W  K F+V+GS+CD SSR +R +LM+ VSSLF  KLNILINNVG  Y  
Sbjct:    43 DETLLNECLSGWHAKGFEVSGSICDVSSRPQRVQLMQTVSSLFGAKLNILINNVG-KYIL 101

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT+E  AED S LM+TN ESAY++SQLAHPLLKASG GNI+ +SSV GV+S    TIY 
Sbjct:   102 KPTLESTAEDFSSLMATNLESAYYISQLAHPLLKASGNGNIVFISSVTGVVS-GTSTIYG 160

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
              TKGA+NQLA++LACEWA DNIR NSVAPW   T L + YL DE F E +  RTP+ R  
Sbjct:   161 VTKGALNQLARDLACEWASDNIRANSVAPWVTATSLVQKYLEDEIFAEAMFSRTPLGRAC 220

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             EP+EV+SLV FLC+PAASYITGQTIC+DGGFTVNGF ++
Sbjct:   221 EPREVASLVTFLCLPAASYITGQTICIDGGFTVNGFSYK 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
 Identities = 141/218 (64%), Positives = 173/218 (79%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             N+ ELN CL +WK     V+GSVCDAS R +REKL+++ SS F+GKLNILINNVGTN   
Sbjct:    44 NQEELNACLNDWKANGLVVSGSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTN-VR 102

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPTVEY +E+ + +MSTN ESA+HLSQ+AHPLLKASG G+I+ +SSV G++  + G+IY 
Sbjct:   103 KPTVEYSSEEYAKIMSTNLESAFHLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYG 162

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
             ATKGA+NQL +NLACEWA DNIR N VAPW+I T L E  L  ++F+E V  RTP+ R G
Sbjct:   163 ATKGALNQLTRNLACEWASDNIRTNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVG 222

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFF 248
             EP+EVSSLVAFLC+PA+SYITGQ I VDGGFTVNGF +
Sbjct:   223 EPEEVSSLVAFLCLPASSYITGQVISVDGGFTVNGFSY 260

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2054447 AT2G30670 [Arabidopsis thaliana (taxid:3702)]

 Score = 726 (260.6 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
 Identities = 140/219 (63%), Positives = 171/219 (78%)

Query:    31 NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
             +E  LN+ L EW+ K F+V+GS+CD SS +ERE LM+ VS +F+GKLNIL+NNVG     
Sbjct:    42 SETLLNQSLSEWEKKGFQVSGSICDVSSHSERETLMQTVSKMFDGKLNILVNNVGV-VNP 100

Query:    91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
             KPT+EY+A D SF +STN ESAYHLSQL+HPLLKAS  G+II +SSV GV+S   G+IY+
Sbjct:   101 KPTIEYVAADFSFSISTNLESAYHLSQLSHPLLKASEFGSIIFISSVGGVVSMECGSIYS 160

Query:   151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG 210
              TKGA+NQLAK LACEWARD IR NSVAP FI T + +P+  D  + + +  RTP+ R G
Sbjct:   161 LTKGALNQLAKTLACEWARDGIRANSVAPNFIYTAMAQPFFKDADYEKSLVSRTPLGRAG 220

Query:   211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR 249
             EP EVSSLVAFLC+PAASYITGQTICVDGG TVNGF ++
Sbjct:   221 EPNEVSSLVAFLCLPAASYITGQTICVDGGLTVNGFSYK 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P94681	TSAC_COMTE	1, ., 2, ., 1, ., 6, 2	0.3055	0.9123	0.9087	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3279	0.8565	0.8739	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3279	0.8565	0.8739	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3279	0.8565	0.8739	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3157	0.8884	0.9139	yes	no
P50162	TRN1_DATST	1, ., 1, ., 1, ., 2, 0, 6	0.5132	0.9442	0.8681	N/A	no
P50163	TRN2_DATST	1, ., 1, ., 1, ., 2, 3, 6	0.5077	0.9322	0.9	N/A	no
P50164	TRN2_HYONI	1, ., 1, ., 1, ., 2, 3, 6	0.5038	0.9362	0.9038	N/A	no
P50165	TRNH_DATST	1, ., 1, ., 1, ., -	0.5534	0.9442	0.8843	N/A	no
P50199	GNO_GLUOX	1, ., 1, ., 1, ., 6, 9	0.3058	0.9163	0.8984	yes	no
P51831	FABG_BACSU	1, ., 1, ., 1, ., 1, 0, 0	0.3227	0.8884	0.9065	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3319	0.8844	0.9173	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018426001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (268 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-129
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	5e-94
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-58
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-56
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-54
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-50
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-50
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-50
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-49
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-49
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-49
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-45
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-45
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-44
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-44
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-42
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	8e-41
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	5e-40
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-39
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	6e-39
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-38
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-38
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-38
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-37
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-36
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-36
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-36
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-35
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-35
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-35
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-35
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	9e-35
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-34
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-34
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-34
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-34
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-33
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-33
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	6e-33
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	6e-33
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-32
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-32
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-32
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-32
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	5e-32
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	5e-32
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	7e-32
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-31
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-31
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-30
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	5e-30
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-29
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-29
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-29
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-29
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-29
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-28
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-28
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	3e-28
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-27
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-27
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-27
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-27
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-27
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	7e-27
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	9e-27
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-26
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-26
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-26
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-26
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-26
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	5e-26
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-26
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	7e-26
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-26
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-25
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-25
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-25
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-25
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-25
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	6e-25
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	6e-25
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	7e-25
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-24
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-24
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-24
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-24
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-24
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-24
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	4e-24
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-24
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-24
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-23
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-23
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-23
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-23
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-23
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-22
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	6e-22
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-21
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	1e-21
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-21
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-21
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-21
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-21
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-21
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	6e-21
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	9e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-20
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-20
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-20
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	4e-20
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	5e-20
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	5e-20
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	7e-20
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	7e-20
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-19
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-19
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-19
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	4e-19
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-19
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	5e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	6e-19
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-19
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	8e-19
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	9e-19
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	9e-19
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-18
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-18
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-18
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	5e-18
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	8e-18
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	9e-18
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-17
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-17
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-17
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-17
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-16
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-16
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-16
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-16
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-16
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	5e-16
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	8e-16
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-15
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-15
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-15
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-15
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-15
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-15
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-15
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-15
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	6e-15
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	6e-15
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	6e-15
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-14
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-14
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-14
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-14
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	4e-14
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	5e-14
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	7e-14
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	7e-14
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-13
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-13
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-13
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	5e-13
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	6e-13
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	8e-13
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	9e-13
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	9e-13
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-12
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	6e-12
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-12
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	7e-12
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	8e-12
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	8e-12
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	8e-12
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-12
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-11
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-11
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-11
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	3e-11
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-11
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-11
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	6e-11
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-11
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-10
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-10
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-09
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-09
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	6e-09
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-08
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-08
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-08
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	4e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	5e-08
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	7e-08
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	2e-07
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-07
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	7e-07
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	8e-07
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	9e-07
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-06
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-06
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	2e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-06
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	4e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-05
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	1e-05
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	2e-05
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-05
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	3e-05
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-05
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-05
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	5e-05
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	8e-05
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-04
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-04
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	4e-04
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	5e-04
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	8e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	9e-04
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	0.002
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	0.002
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  364 bits (935), Expect = e-129
 Identities = 152/252 (60%), Positives = 187/252 (74%), Gaps = 20/252 (7%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RW+L+G TALVTGGTKG+G                   N+ EL+ECL EW+ K FKV GS
Sbjct: 1   RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD SSR+ER++LM  V+S F GKLNIL+NN GTN   K   +Y  ED S +MSTNFE+A
Sbjct: 61  VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTN-IRKEAKDYTEEDYSLIMSTNFEAA 119

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLS+LAHPLLKASG GNI+ +SSV GV++   G  Y ATKGA+NQL ++LACEWA+DNI
Sbjct: 120 YHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNI 179

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N+VAPW I TPL EP +  ++ L++V  RTP++R GEP+EV++LVAFLCMPAASYITG
Sbjct: 180 RVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYITG 239

Query: 233 QTICVDGGFTVN 244
           Q I VDGG T N
Sbjct: 240 QIIAVDGGLTAN 251

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  276 bits (707), Expect = 5e-94
 Identities = 110/258 (42%), Positives = 146/258 (56%), Gaps = 23/258 (8%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC--FK 48
           Q RW L G TAL+TG +KG+G                   +   L +   E   +    +
Sbjct: 2   QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE 61

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           V G   D S   +R  ++  V   ++G L+IL+NN G N   K  ++Y  ++   +  TN
Sbjct: 62  VHGLAADVSDDEDRRAILDWVEDHWDG-LHILVNNAGGN-IRKAAIDYTEDEWRGIFETN 119

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
             SA+ LS+ AHPLLK   +  I+ + SV G+     G  Y  TK A+ Q+ +NLA EWA
Sbjct: 120 LFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA 179

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            D IR+N+VAPW+I TPLT   LSD  + E+V  RTPM R GEP+EV++ VAFLCMPAAS
Sbjct: 180 EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAAS 239

Query: 229 YITGQTICVDGGFTVNGF 246
           YITGQ I VDGGF   GF
Sbjct: 240 YITGQCIAVDGGFLRYGF 257

Length = 257

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  184 bits (470), Expect = 2e-58
 Identities = 79/238 (33%), Positives = 110/238 (46%), Gaps = 23/238 (9%)

Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG + G+G                   NE  L E L   +           D S   
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAE-LAAIEALGGNAVAVQADVSDEE 59

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           + E L+++    F G+L+IL+NN G      P  E   ED   ++  N    + L++ A 
Sbjct: 60  DVEALVEEALEEF-GRLDILVNNAGIARPG-PLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW 180
           P +K  G G I+ +SSV G+        YAA+K A+  L ++LA E A   IR+N+VAP 
Sbjct: 118 PHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPG 177

Query: 181 FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD 238
            + TP+      +E   E      P+ R G P+EV+  V FL    ASYITGQ I VD
Sbjct: 178 LVDTPMLAKLGPEEAEKELAA-AIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  180 bits (459), Expect = 2e-56
 Identities = 83/246 (33%), Positives = 115/246 (46%), Gaps = 23/246 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SLQG TALVTG ++G+G                   NE        E +    +    V 
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  A    L++     F G L+IL+NN G             ED   ++  N    ++
Sbjct: 62  DVSDEAAVRALIEAAVEAF-GALDILVNNAGIT-RDALLPRMSEEDWDRVIDVNLTGTFN 119

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           + + A P +  +  G I+ +SSV GV      T Y+A K  +    K LA E A   I +
Sbjct: 120 VVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITV 179

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP FI T +TE     E+   E+    P+ R G+P+EV++ VAFL   AASYITGQ 
Sbjct: 180 NAVAPGFIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQV 237

Query: 235 ICVDGG 240
           I V+GG
Sbjct: 238 IPVNGG 243

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  175 bits (446), Expect = 1e-54
 Identities = 88/254 (34%), Positives = 120/254 (47%), Gaps = 29/254 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREW--KTKCFKVTG 51
            L G  ALVTG + G+G                    +E E  E L     +    +   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 52  SVCDASS-RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
              D S      E L+      F G+++IL+NN G      P  E   ED   ++  N  
Sbjct: 62  VAADVSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
            A+ L++ A PL+K      I+ +SSV G+        YAA+K A+  L K LA E A  
Sbjct: 121 GAFLLTRAALPLMK---KQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKF-LEEVKCRTPMERPGEPKEVSSLVAFLCMP-AAS 228
            IR+N+VAP +I TP+T    S E   L+ +  R P+ R G P+EV++ VAFL    AAS
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAAS 237

Query: 229 YITGQTICVDGGFT 242
           YITGQT+ VDGG  
Sbjct: 238 YITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  165 bits (420), Expect = 1e-50
 Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 21/249 (8%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL+G  ALVTG ++G+G                   NE +  E  +  + +  + T   C
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S     +  ++ +   F GK++IL+NN G      P  E+   +   ++  N    + 
Sbjct: 62  DVSDEEAIKAAVEAIEEDF-GKIDILVNNAGIIRR-HPAEEFPEAEWRDVIDVNLNGVFF 119

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           +SQ     +   G G II + S+   L       YAA+KG +  L K LA EWAR  I++
Sbjct: 120 VSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQV 179

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N++AP +  T +TE  ++D +F +++  R P  R G+P+++     FL   A+ Y+ GQ 
Sbjct: 180 NAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQI 239

Query: 235 ICVDGGFTV 243
           I VDGG+  
Sbjct: 240 IFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  164 bits (417), Expect = 3e-50
 Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 23/251 (9%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G  A+VTG + G+G                   NE        E      +      D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEI-LAGGRAIAVAAD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S  A+ E  +      F G ++IL+NN GT +   P ++    +   + + N +S Y  
Sbjct: 62  VSDEADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +Q A P ++  G G I+ V+S  G+        Y A+KGA+  L K LA E   D IR+N
Sbjct: 121 TQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180

Query: 176 SVAPWFITTPLTEPYLS--DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +VAP  + T L E ++     +   +     P+ R G P+++++   FL    AS+ITG 
Sbjct: 181 AVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGV 240

Query: 234 TICVDGGFTVN 244
           T+ VDGG  V 
Sbjct: 241 TLVVDGGRCVG 251

Length = 251

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  164 bits (417), Expect = 4e-50
 Identities = 76/252 (30%), Positives = 109/252 (43%), Gaps = 25/252 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L+G  ALVTG  +G+G                      +        +    K      
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAY 113
           D   RA  +  +      F G+L+IL+ N G           M  E    ++  N    +
Sbjct: 63  DVRDRAALKAAVAAGVEDF-GRLDILVANAG--IFPLTPFAEMDDEQWERVIDVNLTGTF 119

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNI 172
            L+Q A P L  +G G I+L SSV G      G   YAA+K  +    + LA E A  NI
Sbjct: 120 LLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNI 179

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +NSV P  + TP+    L D ++ E +    P+ R GEP+++++ V FL    A YITG
Sbjct: 180 TVNSVHPGGVDTPMAGN-LGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITG 238

Query: 233 QTICVDGGFTVN 244
           QT+ VDGG T+ 
Sbjct: 239 QTLPVDGGATLP 250

Length = 251

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  163 bits (414), Expect = 1e-49
 Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L G  A+VTG + G+G                    NE    E L E K +         
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D SS  + E L++Q+   F GK++IL+NN G +       +   E+   ++  N      
Sbjct: 63  DVSSEEDVENLVEQIVEKF-GKIDILVNNAGISNF-GLVTDMTDEEWDRVIDVNLTGVML 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L++ A P +    +G I+ +SS+ G++  +   +Y+A+KGA+N   K LA E A   IR+
Sbjct: 121 LTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRV 180

Query: 175 NSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           N+VAP  I T   +     D++ L E     P+ R G+P+E++ +V FL    ASYITGQ
Sbjct: 181 NAVAPGAIDTEMWSSFSEEDKEGLAEEI---PLGRLGKPEEIAKVVLFLASDDASYITGQ 237

Query: 234 TICVDGGFTV 243
            I VDGG+T 
Sbjct: 238 IITVDGGWTC 247

Length = 247

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  161 bits (411), Expect = 3e-49
 Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 26/252 (10%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           SL+G  ALVTG ++G+G                    +EA     + E      K     
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S     E+ + +  + F G ++IL+NN G        +    ED   ++ TN    +
Sbjct: 62  GDVSDAESVERAVDEAKAEF-GGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
           +L++     +    +G II +SSV G++  N G   YAA+K  +    K+LA E A   I
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLMG-NPGQANYAASKAGVIGFTKSLARELASRGI 178

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N+VAP FI T +T+  L ++   E +  + P+ R G+P+E++S VAFL    A+YITG
Sbjct: 179 TVNAVAPGFIETDMTD-ALPED-VKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITG 236

Query: 233 QTICVDGGFTVN 244
           QT+ V+GG  + 
Sbjct: 237 QTLHVNGGMVMG 248

Length = 248

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  160 bits (408), Expect = 9e-49
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 24/250 (9%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           SL G  ALVTG  +GLG                    +E    E +   +    +     
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D + +A  E  +      F G+++IL+NN G     KP  +   ++   ++  N    +
Sbjct: 63  ADVTDKAALEAAVAAAVERF-GRIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGVF 120

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           HL +   P ++    G I+ +SSV G+      + YAA K  +  L K LA E A   I 
Sbjct: 121 HLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGIT 180

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N VAP  I T + E  + + +  ++    TP+ R G P++++  VAFLC  A+ YITGQ
Sbjct: 181 VNMVAPGDIDTDMKEATIEEAREAKDA--ETPLGRSGTPEDIARAVAFLCSDASDYITGQ 238

Query: 234 TICVDGGFTV 243
            I V GG  V
Sbjct: 239 VIEVTGGVDV 248

Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  151 bits (384), Expect = 2e-45
 Identities = 87/245 (35%), Positives = 127/245 (51%), Gaps = 32/245 (13%)

Query: 20  ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           ALVTG ++G+G                    +E    E + E K    K  G VCD S R
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT--VEYMAEDLSFLMSTNFESAYHLSQ 117
            + + +++++     G ++IL+NN G    T+    +    ED   ++ TN    ++L+Q
Sbjct: 61  EDVKAVVEEIEEEL-GPIDILVNNAG---ITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQ 116

Query: 118 LA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRIN 175
                ++K    G II +SSV G L  N G   YAA+K  +    K+LA E A  NI +N
Sbjct: 117 AVLRIMIKQRS-GRIINISSVVG-LMGNAGQANYAASKAGVIGFTKSLAKELASRNITVN 174

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +VAP FI T +T+  LS EK  +++  + P+ R G P+EV++ VAFL    ASYITGQ I
Sbjct: 175 AVAPGFIDTDMTDK-LS-EKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVI 232

Query: 236 CVDGG 240
            VDGG
Sbjct: 233 HVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  151 bits (383), Expect = 4e-45
 Identities = 82/260 (31%), Positives = 134/260 (51%), Gaps = 36/260 (13%)

Query: 11  DRWSLQGMTALVTGGTKGLG-----------------------NEAELNECLREW--KTK 45
           D +SL+G  A+VTGG++G+G                        E +  E  +++  KTK
Sbjct: 2   DLFSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTK 61

Query: 46  CFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLM 105
            +K     CD SS+   EK  KQ+   F GK++ILI N G     KP ++Y  E  + ++
Sbjct: 62  AYK-----CDVSSQESVEKTFKQIQKDF-GKIDILIANAGIT-VHKPALDYTYEQWNKVI 114

Query: 106 STNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--NLGTIYAATKGAMNQLAKNL 163
             N    ++ +Q A  + K  G G++I+ +S+ G +         Y A+K A+  LAK+L
Sbjct: 115 DVNLNGVFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSL 174

Query: 164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           A EWA+  IR+NS++P +I T LT     D++  ++ +   P++R   P+E+     +L 
Sbjct: 175 AVEWAKYFIRVNSISPGYIDTDLT--DFVDKELRKKWESYIPLKRIALPEELVGAYLYLA 232

Query: 224 MPAASYITGQTICVDGGFTV 243
             A+SY TG  + +DGG+T 
Sbjct: 233 SDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  149 bits (379), Expect = 1e-44
 Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 29/244 (11%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTG ++G+G                   +E    E + E K           D S R
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-EDLSFLMSTNFESAYHLSQ- 117
              E L+++V + F G ++IL+NN G   T    +  M+ ED   +++ N    ++++Q 
Sbjct: 62  EAVEALVEKVEAEF-GPVDILVNNAGI--TRDNLLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +   ++K   +G II +SSV G++  N G   YAA+K  +    K+LA E A   I +N+
Sbjct: 119 VIRAMIKR-RSGRIINISSVVGLIG-NPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 177 VAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
           VAP FI T +T+     EK  E++  + P+ R G P+EV++ VAFL    ASYITGQ + 
Sbjct: 177 VAPGFIDTDMTDAL--PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVLH 234

Query: 237 VDGG 240
           V+GG
Sbjct: 235 VNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  150 bits (380), Expect = 1e-44
 Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 32/257 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G+  LVTGG  G+G                   +EA L            KVT +V 
Sbjct: 8   PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVA 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  A+ E++       F G L++L+NN G    T    E   E     ++ N    ++
Sbjct: 66  DVADPAQVERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 115 LSQLAHPLLKASGAGN-IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            ++ A PLLKASG G  II +SSV G L     T YAA+K A+  L K+LA E     IR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 174 INSVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           +N++ P  +  P     +           ++  +E   +  + R  EP+++++   FL  
Sbjct: 185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS 244

Query: 225 PAASYITGQTICVDGGF 241
           PAA YITGQ I VDG  
Sbjct: 245 PAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  144 bits (366), Expect = 2e-42
 Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 23/253 (9%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
            R+SL G  ALVTG  +GLG                   N A L   +   +        
Sbjct: 5   QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEA 64

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D +          ++ +  +G+L+IL+NNVG     +P  E     +  L+ T+  +
Sbjct: 65  LAFDIADEEAVAAAFARIDAE-HGRLDILVNNVGAR-DRRPLAELDDAAIRALLETDLVA 122

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              LS+LA   +K  G G II ++S+ G ++     +Y A K  +  L + LA E+    
Sbjct: 123 PILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHG 182

Query: 172 IRINSVAP-WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           I  N++AP +F T        +D      +  RTP+ R G P+E++    FL  PAASY+
Sbjct: 183 ITSNAIAPGYFATET-NAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYV 241

Query: 231 TGQTICVDGGFTV 243
            G  + VDGG++V
Sbjct: 242 NGHVLAVDGGYSV 254

Length = 256

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 8e-41
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 28/258 (10%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
            + + L G TALVTGG++GLG                      EL E     +       
Sbjct: 5   LELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDAL 64

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
               D +  A+ E+L ++    F G ++IL+NN G  +   P  ++  E    +M+ N  
Sbjct: 65  WIAADVADEADIERLAEETLERF-GHVDILVNNAGATWGA-PAEDHPVEAWDKVMNLNVR 122

Query: 111 SAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTN---LGTI-YAATKGAMNQLAKNLAC 165
             + LSQ +A   +   G G II V+SV G+       + TI Y  +KGA+    + LA 
Sbjct: 123 GLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAA 182

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           EW    IR+N++AP F  T +T   L  E+  E++   TP+ R G+ +++      L   
Sbjct: 183 EWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASD 240

Query: 226 AASYITGQTICVDGGFTV 243
           A+ +ITGQ + VDGG + 
Sbjct: 241 ASKHITGQILAVDGGVSA 258

Length = 259

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  138 bits (349), Expect = 5e-40
 Identities = 87/259 (33%), Positives = 125/259 (48%), Gaps = 26/259 (10%)

Query: 6   DHDRQDRWSLQGMTALVTGGTKGLGN------------------EAELNECLREWKTKCF 47
           D    D +SL G  A+VTGG  GLG                       +E  R  + +  
Sbjct: 4   DKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGR 63

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           KVT    D +     EK++K+    F GK++IL+NN GT     P +EY  ED + +M  
Sbjct: 64  KVTFVQVDLTKPESAEKVVKEALEEF-GKIDILVNNAGT-IRRAPLLEYKDEDWNAVMDI 121

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI---YAATKGAMNQLAKNLA 164
           N  S YHLSQ    ++   G+G II ++S+   LS   G     Y A+K  +  L K  A
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIASM---LSFQGGKFVPAYTASKHGVAGLTKAFA 178

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            E A  NI++N++AP +I T  T P  +D+   +E+  R P  R GEP ++     FL  
Sbjct: 179 NELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLAS 238

Query: 225 PAASYITGQTICVDGGFTV 243
            A+ Y+ G  + VDGG+ V
Sbjct: 239 RASDYVNGHILAVDGGWLV 257

Length = 258

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  136 bits (345), Expect = 2e-39
 Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 30/254 (11%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           G  ALVT  + G+G                   N   L     E +     V   V D +
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
              + ++L+++    F G+++IL+NN G      P  E   ED          S   + +
Sbjct: 61  DPEDIDRLVEKAGDAF-GRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLSVIRIVR 118

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
              P +K  G G I+ +SS+          +    +  +  L K L+ E A D + +NSV
Sbjct: 119 AVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSV 178

Query: 178 AP-WFITTPLTEPY--------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            P +  T  +            +S E+  +EV  + P+ R G+P+E+++L+AFL    AS
Sbjct: 179 LPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKAS 238

Query: 229 YITGQTICVDGGFT 242
           YITGQ I VDGG T
Sbjct: 239 YITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 6e-39
 Identities = 84/255 (32%), Positives = 128/255 (50%), Gaps = 32/255 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NE----AELNECLREWKTKCFKVTG 51
           L+G  AL+TGG  G+G                   +E     E  + + +   KC  + G
Sbjct: 44  LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPG 103

Query: 52  SVCDAS-SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
            V D +  +   E+ ++++     G+L+IL+NN    Y  +   +  AE L     TN  
Sbjct: 104 DVSDEAFCKDAVEETVREL-----GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIY 158

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           S +H+++ A P LK   A  II   S+ G         Y+ATKGA++   ++LA    + 
Sbjct: 159 SYFHMTKAALPHLKQGSA--IINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQK 216

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            IR+N+VAP  I TPL  P   DE+ + +    TPM+RPG+P+E++    FL  P +SYI
Sbjct: 217 GIRVNAVAPGPIWTPLI-PSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYI 275

Query: 231 TGQTICVDGGFTVNG 245
           TGQ + V+GG  VNG
Sbjct: 276 TGQMLHVNGGVIVNG 290

Length = 290

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  134 bits (338), Expect = 2e-38
 Identities = 83/257 (32%), Positives = 121/257 (47%), Gaps = 38/257 (14%)

Query: 13  WSLQGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKV 49
            SL     L+TGG+ GLG                         AE +      +    K 
Sbjct: 2   ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61

Query: 50  TGSVCD----ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLM 105
            G   D    A++RA  +  +++      G+L+IL+NN G   T     E   E+   ++
Sbjct: 62  LGLAFDVRDFAATRAALDAGVEE-----FGRLDILVNNAGI-ATDAAFAELSIEEWDDVI 115

Query: 106 STNFESAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA 164
             N +  ++++Q    P+++A   G I+ ++SV GV        YAA+K  +  L K LA
Sbjct: 116 DVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLA 175

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            E A   I +N+VAP  I TP+ +     E  L  V    P++R GEP EV++LVAFL  
Sbjct: 176 NELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPV----PVQRLGEPDEVAALVAFLVS 231

Query: 225 PAASYITGQTICVDGGF 241
            AASY+TGQ I VDGGF
Sbjct: 232 DAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  133 bits (336), Expect = 4e-38
 Identities = 76/249 (30%), Positives = 112/249 (44%), Gaps = 23/249 (9%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+G  ALVTG + G+G                     E    E + E K    K      
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S   +   L +     F G L+IL+NN G       + E   ED + ++  N    + 
Sbjct: 61  DVSKEEDVVALFQSAIKEF-GTLDILVNNAGLQ-GDASSHEMTLEDWNKVIDVNLTGQFL 118

Query: 115 LSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            ++ A     K+   G II +SSV   +       YAA+KG +  + K LA E+A   IR
Sbjct: 119 CAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIR 178

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++AP  I TP+      D +   ++    PM R GEP+E+++  A+L    ASY+TG 
Sbjct: 179 VNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEASYVTGT 238

Query: 234 TICVDGGFT 242
           T+ VDGG T
Sbjct: 239 TLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  132 bits (335), Expect = 5e-38
 Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 28/247 (11%)

Query: 20  ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           ALVTGG++G+G                    ++    E   E +    K      D S  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            + E++   V   F G+L++L++N       +P  E         M+TN ++  H +Q A
Sbjct: 61  QDVEEMFAAVKERF-GRLDVLVSNAAAGAF-RPLSELTPAHWDAKMNTNLKALVHCAQQA 118

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAA---TKGAMNQLAKNLACEWARDNIRINS 176
             L++  G G I+ +SS+ G +       Y A    K A+  L + LA E     IR+N+
Sbjct: 119 AKLMRERGGGRIVAISSL-GSIRALPN--YLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 177 VAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
           V+P  I T     + + E  LE     TP  R G P++V+  V FLC  AA  ITGQT+ 
Sbjct: 176 VSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLV 235

Query: 237 VDGGFTV 243
           VDGG ++
Sbjct: 236 VDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  136 bits (344), Expect = 4e-37
 Identities = 77/249 (30%), Positives = 121/249 (48%), Gaps = 20/249 (8%)

Query: 16  QGMTALVTGGTKGLGNEA----------------ELNECLREWKTKCFKVTGSVCDASSR 59
           Q    LVTG   G+G  A                 +        +          D S  
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDE 63

Query: 60  AEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
           A+  +  +Q+   F G++++L+NN G T+ T   T++   E+ + L + N   AY +++ 
Sbjct: 64  AQIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVARE 122

Query: 119 AHPLLKASGAGN-IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
           A  L+   G G  I+ V+S  G+++    T Y+A+K A+  L ++LACEWA   IR+N+V
Sbjct: 123 ALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAV 182

Query: 178 APWFITTPLTEPYLSDEKF-LEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
            P ++ T +        K     V+ R P+ R G P+E++  V FL    ASYITG T+ 
Sbjct: 183 LPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLV 242

Query: 237 VDGGFTVNG 245
           VDGG+TV G
Sbjct: 243 VDGGWTVYG 251

Length = 520

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 1e-36
 Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 27/255 (10%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           + +SL+G  AL+TG + G+G                   N+  +++ L  ++    +  G
Sbjct: 4   NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHG 63

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
            VCD +     + ++ Q+     G ++IL+NN G      P +E  AED   ++  +  +
Sbjct: 64  YVCDVTDEDGVQAMVSQIEKEV-GVIDILVNNAGIIKRI-PMLEMSAEDFRQVIDIDLNA 121

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            + +S+   P +   G G II + S+   L     + YAA KG +  L KN+A E+   N
Sbjct: 122 PFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEAN 181

Query: 172 IRINSVAPWFITTPLTEP------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           I+ N + P +I TP T P        S   F + +  +TP  R G+P++++    FL   
Sbjct: 182 IQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASD 241

Query: 226 AASYITGQTICVDGG 240
           A++++ G  + VDGG
Sbjct: 242 ASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  129 bits (326), Expect = 1e-36
 Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 37/256 (14%)

Query: 15  LQGMTALVTGGTKGLGNE-----AELNEC----------LREWKTKCFKVTGS------- 52
           L G  A++TG + G+G       A L             L E +  C +   S       
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN----YTTKPTVEYMAEDLSFLMSTN 108
           V D +    +++++    + F G+L+IL+NN G         +   EY       +M+ N
Sbjct: 61  VADLTEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDK-----VMNLN 114

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
             +  +L++LA P L  +  G I+ VSSV G  S      Y  +K A++Q  +  A E A
Sbjct: 115 LRAVIYLTKLAVPHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELA 173

Query: 169 RDNIRINSVAPWFITTPLTEPY-LSDE---KFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
              +R+NSV+P  I T       + +E   KFL   K   P+ RPG   EV+  +AFL  
Sbjct: 174 PKGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLAS 233

Query: 225 PAASYITGQTICVDGG 240
            A+S+ITGQ + VDGG
Sbjct: 234 DASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 1e-36
 Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 24/251 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +L G  ALVTG  +GLG                     AE  E     +    +      
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  A  ++     ++   G L+ L+NN G    +K   E   +    +M+ N    + 
Sbjct: 64  DLADPASVQRFFDAAAAAL-GGLDGLVNNAGI-TNSKSATELDIDTWDAVMNVNVRGTFL 121

Query: 115 LSQLAHPLLKASGAGNII-LVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           + + A P L+ SG G I+ L S      +  LG  Y A+KGA+  + ++LA E     I 
Sbjct: 122 MLRAALPHLRDSGRGRIVNLASDTALWGAPKLGA-YVASKGAVIGMTRSLARELGGRGIT 180

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++AP    T  T  Y+  ++          +ER   P +V+  V FL   AA ++TGQ
Sbjct: 181 VNAIAPGLTATEATA-YVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQ 239

Query: 234 TICVDGGFTVN 244
            + V+GGF +N
Sbjct: 240 LLPVNGGFVMN 250

Length = 250

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 1e-35
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 21/248 (8%)

Query: 15  LQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGS-----VCD 55
             G  ALVTGG  G+G                A+ +    E      +  G       CD
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  AE + L++Q  + + G+L+   NN G         E    +   +M  N +  +  
Sbjct: 65  VTRDAEVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLC 123

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +   PL+ A G G I+  +SV G+ +    +IYAA+K A+  L K+ A E+A+  IR+N
Sbjct: 124 MKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN 183

Query: 176 SVAPWFITTPLTEP-YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           +V P  I T +    Y +D +  E      P+ R G+ +EV+S V +LC   AS+ TG  
Sbjct: 184 AVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHA 243

Query: 235 ICVDGGFT 242
           + VDGG T
Sbjct: 244 LMVDGGAT 251

Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 2e-35
 Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 31/259 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G  ALVTG   G+G                   N+          +    K  G   D
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +        +      F G ++IL+NN G  +   P  ++  E    +++   + A+  
Sbjct: 62  VTDEEAINAGIDYAVETF-GGVDILVNNAGIQHVA-PIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++ A P++KA G G II ++SV G++ +     Y + K  +  L K +A E A   + +N
Sbjct: 120 TKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVN 179

Query: 176 SVAPWFITTPLTEPYLSD---------EKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMP 225
           ++ P ++ TPL    + D         E+ LE+V     P +R    +E++    FL   
Sbjct: 180 AICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF 239

Query: 226 AASYITGQTICVDGGFTVN 244
           AA  +TGQ   VDGG+T  
Sbjct: 240 AAKGVTGQAWVVDGGWTAQ 258

Length = 258

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  124 bits (314), Expect = 6e-35
 Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 37/254 (14%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK------- 67
           L G  ALVTG ++G+G    + + L         V   V  ASS+A  E+++        
Sbjct: 1   LAGKVALVTGASRGIG--RAIAKRLAR---DGASVV--VNYASSKAAAEEVVAEIEAAGG 53

Query: 68  -------------QVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
                        QV+ LF+      G ++IL+NN G     KP  E   E+   + + N
Sbjct: 54  KAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGV-MLKKPIAETSEEEFDRMFTVN 112

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
            + A+ + Q A   L+  G   II +SS      T     YA +K A+    + LA E  
Sbjct: 113 TKGAFFVLQEAAKRLRDGGR--IINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELG 170

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              I +N+VAP  + T +     ++E      K  +P+ R GEP++++ +VAFL  P   
Sbjct: 171 GRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKM-SPLGRLGEPEDIAPVVAFLASPDGR 229

Query: 229 YITGQTICVDGGFT 242
           ++ GQ I  +GG+ 
Sbjct: 230 WVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  124 bits (314), Expect = 7e-35
 Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 20/244 (8%)

Query: 15  LQGMTALVTGGTKGLGN---EAELNECLR--------EWKTKCFKVTGSV---CDASSRA 60
            +G  AL+TGGT+G+G    EA L E  +        E + K  +  G     CD  +R 
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRD 64

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           + +K  + V   F G++++L+NN G  Y   P  E+  E  + ++  N   A + +    
Sbjct: 65  QVKKSKEVVEKEF-GRVDVLVNNAGIMYLM-PFEEFDEEKYNKMIKINLNGAIYTTYEFL 122

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLGT-IYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
           PLLK S  G I+ ++S  G+ +   GT  YA TK  +  L + LA E  +  IR+N+VAP
Sbjct: 123 PLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAP 182

Query: 180 WFITTPLTEPYLSDE---KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
            ++ T +T    S E   K  E  + +T ++  G+P++++++V FL    A YITGQ I 
Sbjct: 183 GWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIV 242

Query: 237 VDGG 240
            DGG
Sbjct: 243 ADGG 246

Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  124 bits (314), Expect = 9e-35
 Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 34/253 (13%)

Query: 15  LQGMTALVTGGTKGLGNE-----AELN----------ECLREWKTKCFKVTGSV-----C 54
           L+G  A +TGG  G+G       AEL           E L     +    TG       C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-----LMSTNF 109
           D       E  + +    F GK++ILINN   N+         AE LS      ++  + 
Sbjct: 61  DVRDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAP------AESLSPNGFKTVIDIDL 113

Query: 110 ESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
              ++ ++     L++A   G+I+ +S+      +      AA K  ++ L ++LA EW 
Sbjct: 114 NGTFNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG 173

Query: 169 RDNIRINSVAP-WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
              IR+N++AP    TT   E      K  +++  R P+ R G P+E+++L  FL   AA
Sbjct: 174 PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDAA 233

Query: 228 SYITGQTICVDGG 240
           SYI G T+ VDGG
Sbjct: 234 SYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  123 bits (311), Expect = 2e-34
 Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 42/255 (16%)

Query: 19  TALVTGGTKGLGNEAEL----------------NECLREW-----------KTKCFKVTG 51
            ALVTG  +G+G+                    N+C ++W           + K      
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKEL---- 59

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV--EYMAEDLSFLMSTNF 109
            V D    AE    +++      G ++IL+NN G    T+ +V      ++ + +++TN 
Sbjct: 60  DVTDTEECAEALAEIEEE----EGPVDILVNNAGI---TRDSVFKRMSHQEWNDVINTNL 112

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S ++++Q     +   G G II +SSV G+      T Y+A K  M    K LA E AR
Sbjct: 113 NSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGAR 172

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I +N +AP +I TP+ E  +  E  L+ +  + PM+R G P+E+++ VAFL   AA +
Sbjct: 173 YGITVNCIAPGYIATPMVEQ-MGPE-VLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGF 230

Query: 230 ITGQTICVDGGFTVN 244
           ITG+TI ++GG  ++
Sbjct: 231 ITGETISINGGLYMH 245

Length = 245

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  123 bits (310), Expect = 3e-34
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 27/252 (10%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L+G  A+VTGG +GLG                    + E      E             
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---L 58

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +       ++      F G+L++L+NN G   T         E+   L+  N    + 
Sbjct: 59  DVTDEDGWTAVVDTAREAF-GRLDVLVNNAGIL-TGGTVETTTLEEWRRLLDINLTGVFL 116

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA--CEWARDNI 172
            ++   P +K +G G+II +SS+ G++       Y A+KGA+  L K+ A  C      I
Sbjct: 117 GTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+NSV P +I TP+T+  L  +  +      TPM R GEP E++  V +L    +S++TG
Sbjct: 177 RVNSVHPGYIYTPMTDELLIAQGEMGNYP-NTPMGRAGEPDEIAYAVVYLASDESSFVTG 235

Query: 233 QTICVDGGFTVN 244
             + VDGG+T  
Sbjct: 236 SELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  122 bits (308), Expect = 4e-34
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 29/244 (11%)

Query: 20  ALVTGGTKGLGNE--------------AELN--------ECLREWKTKCFKVTGSVCDAS 57
           A+VTGG  G+G                A+L           +++   +     G  C+ +
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAI---GLECNVT 58

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
           S  + E ++K   S F G + IL+NN G        +    ED  +    N  SA+ LSQ
Sbjct: 59  SEQDLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
           L  P ++ +G G I+ +SS+           Y ++K A+N + +NLA +     IR+N+V
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAV 177

Query: 178 APWFITTPLTEPYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
           AP  + T      L+ E  +E    + TP+ R GEP+++++   FLC PA+++++GQ + 
Sbjct: 178 APGAVKTDALASVLTPE--IERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLT 235

Query: 237 VDGG 240
           V GG
Sbjct: 236 VSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  122 bits (308), Expect = 6e-34
 Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 31/256 (12%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           G TALVTG   G+G                    E       +        V     D +
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
              E   ++   ++ F G L+IL+NN G  +   P  E+  ED   +++    SA+H  +
Sbjct: 61  KEDEIADMIAAAAAEF-GGLDILVNNAGIQHVA-PIEEFPPEDWDRIIAVMLTSAFHTIR 118

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
            A P +K  G G II ++S  G++++   + Y A K  +  L K LA E A   I +N++
Sbjct: 119 AALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAI 178

Query: 178 APWFITTPLTEPYLSD---------EKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAA 227
            P ++ TPL E  ++D         E+ + EV  +  P +R     EV+    +L   AA
Sbjct: 179 CPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAA 238

Query: 228 SYITGQTICVDGGFTV 243
           + ITGQ I +DGG+T 
Sbjct: 239 AQITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  126 bits (319), Expect = 1e-33
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 30/251 (11%)

Query: 17  GMTALVTGGTKGLG------------------NEAELNECLREW---KTKCFKVTGSVCD 55
                +TGG +G+G                   +AE  + L E    +    +      D
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA-----D 323

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A  E    Q+ + + G+L++L+NN G     KP++E  AED + +   N   A+  
Sbjct: 324 ITDEAAVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFAC 382

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++ A      S  G I+ + S+  +L+      Y A+K A+  L+++LACEWA   IR+N
Sbjct: 383 ARAA--ARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVN 440

Query: 176 SVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           +VAP +I TP       S     + ++ R P+ R G+P+EV+  +AFL  PAASY+ G T
Sbjct: 441 TVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGAT 500

Query: 235 ICVDGGFTVNG 245
           + VDGG+T  G
Sbjct: 501 LTVDGGWTAFG 511

Length = 520

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 3e-33
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 21/250 (8%)

Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV 53
           + L G  ALVTG ++G+G                   + A+L       K +        
Sbjct: 6   FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +        +    +   G ++IL+NN G  + T P  ++ A+    L+ TN  S +
Sbjct: 66  FDVTDHDAVRAAIDAFEAEI-GPIDILVNNAGMQFRT-PLEDFPADAFERLLRTNISSVF 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           ++ Q     + A GAG II ++SV   L+      Y ATKGA+  L K +A +WA+  ++
Sbjct: 124 YVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQ 183

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
            N++AP +  TPL    ++D +F   ++ RTP  R G+ +E+     FL   A+S++ G 
Sbjct: 184 CNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGH 243

Query: 234 TICVDGGFTV 243
            + VDGG T 
Sbjct: 244 VLYVDGGITA 253

Length = 255

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  120 bits (303), Expect = 6e-33
 Identities = 81/254 (31%), Positives = 118/254 (46%), Gaps = 31/254 (12%)

Query: 15  LQGMTALVTGGTKGLGNEA------------------------ELNECLREWKTKCFKVT 50
           L+G  AL+TGG  G+G                           E  + + E   KC  + 
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIP 83

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
           G + D S   +   L+K+V   F GKL+IL+NN    +  +   +   E L     TN  
Sbjct: 84  GDLGDESFCRD---LVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIF 139

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           S ++L++ A P LK   +  II  +SV     +     YAATKGA+    + L+ + A  
Sbjct: 140 SMFYLTKAALPHLKKGSS--IINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEK 197

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            IR+N+VAP  I TPL      +EK   E   + PM R G+P EV+    FL    +SY+
Sbjct: 198 GIRVNAVAPGPIWTPLIPSSFPEEKV-SEFGSQVPMGRAGQPAEVAPAYVFLASQDSSYV 256

Query: 231 TGQTICVDGGFTVN 244
           TGQ + V+GG  +N
Sbjct: 257 TGQVLHVNGGEIIN 270

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  119 bits (301), Expect = 6e-33
 Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 27/252 (10%)

Query: 13  WSLQGMTALVTGGTKGLGNE---------AELNECLREWKTKCFKVTGSV---------- 53
           +S+ G   LVTGG++G+G           A +    R+ +  C      +          
Sbjct: 2   FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEA-CADAAEELSAYGECIAIP 60

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D SS    E L+ +V+   + +L++L+NN G  +   P   +       +M  N +S +
Sbjct: 61  ADLSSEEGIEALVARVAER-SDRLDVLVNNAGATWGA-PLEAFPESGWDKVMDINVKSVF 118

Query: 114 HLSQLAHPLLKASG-AGN---IILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWA 168
            L+Q   PLL+A+  A N   +I + S+ G++ + L    Y A+K A++QL + LA E A
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELA 178

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            ++I +N++AP    + +T   L+D   LE  +   P+ R G P++++ L   L   A +
Sbjct: 179 GEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLASRAGA 238

Query: 229 YITGQTICVDGG 240
           Y+TG  I VDGG
Sbjct: 239 YLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 2e-32
 Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 23/252 (9%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           DR+ L    A+VTG  +GLG                    E++L+E   + +    +   
Sbjct: 4   DRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV 63

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D +       L  Q    F G+L+I++NNVG      P +    +DL+   + N  +
Sbjct: 64  VAADLAHPEATAGLAGQAVEAF-GRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVAT 121

Query: 112 AYHLSQLAHPL-LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           A+ L+  A PL L+ SG G++I +SS  G L+      Y   K A+    +  A +    
Sbjct: 122 AHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLC-P 180

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            IR+N++AP  I T   E   ++++    ++  TP+ R G+P+++++   +L  PA SY+
Sbjct: 181 RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYL 240

Query: 231 TGQTICVDGGFT 242
           TG+T+ VDGG T
Sbjct: 241 TGKTLEVDGGLT 252

Length = 263

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 8/174 (4%)

Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA-HPLLKASGAGNIIL 133
           G++++L+NN G   T  P ++   ++   + + + + A+  SQ+A   ++K    G II 
Sbjct: 79  GRIDVLVNNAGAM-TKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIIN 137

Query: 134 VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
           ++SV         + Y A K A+  L K +A E     I +N+VAP  I TP+     SD
Sbjct: 138 ITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSD 197

Query: 194 --EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
                   +    P+ RPG+  E++SLVA+LC   ASY TGQ++ VDGGF +  
Sbjct: 198 VKPDSRPGI----PLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFMLAN 247

Length = 256

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 3e-32
 Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 27/254 (10%)

Query: 15  LQGMTALVTGGTKGLGN------------------EAELNECLREWKTKCFKVTGSVCDA 56
           L G TAL+TG  +G+G                     E+ +   E   +  + T  V D 
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADV 63

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
              A     +K+      G+++IL+NN G        ++   ED  F +  N +  ++++
Sbjct: 64  RDPASVAAAIKRAKEKE-GRIDILVNNAGV-CRLGSFLDMSDEDRDFHIDINIKGVWNVT 121

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +   P + A   G I+++SSV G +  + G T YA TK A+  L K+LA E+A+  IR+N
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181

Query: 176 SVAPWFITTPLTEPYL--SD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           ++ P ++ TP+ E     S+    E  L E+    P+ R  +P EV  L AFL    +SY
Sbjct: 182 AICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSY 241

Query: 230 ITGQTICVDGGFTV 243
           +TG    +DGG T+
Sbjct: 242 LTGTQNVIDGGSTL 255

Length = 263

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 3e-32
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 30/254 (11%)

Query: 14  SLQGMTALVTGGTKGLGNEAELNECLREWKTK----------CFKVTGSVCDASSRAERE 63
            L G  ALVTG ++G+G    + + L +              C  V  ++  A  +AE  
Sbjct: 5   DLTGKIALVTGASRGIG--EAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEAL 62

Query: 64  KL----MKQVSSLF------NGKLNILINNVGTNYTTKPTVEYMAE-DLSFLMST---NF 109
                 M+Q+ +LF      +G+L+IL+NN   N    P   ++ + DL     T   N 
Sbjct: 63  ACHIGEMEQIDALFAHIRERHGRLDILVNNAAAN----PYFGHILDTDLGAFQKTVDVNI 118

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
              + +S  A  L+K  G G+I+ V+SV GV   +   IY+ TK A+  + K  A E A 
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAP 178

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR+N++ P    T        ++  L++     P+ R  EP E++  V +L   A+SY
Sbjct: 179 FGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSY 238

Query: 230 ITGQTICVDGGFTV 243
            TG+ + VDGG+  
Sbjct: 239 TTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  117 bits (295), Expect = 5e-32
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 22/251 (8%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
             R  L    ALVT  T G+G                    +  ++  +   + +   VT
Sbjct: 3   TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT 62

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
           G+VC      +RE+L+    +L  G ++IL++N   N      ++   E    ++  N +
Sbjct: 63  GTVCHVGKAEDRERLVATAVNLHGG-VDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWAR 169
           +   +++   P ++  G G++++VSSV        LG  Y  +K A+  L KNLA E A 
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP-YNVSKTALLGLTKNLAPELAP 180

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NIR+N +AP  I T  +     D+   E +K    + R G+P++ + +V+FLC   ASY
Sbjct: 181 RNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDASY 240

Query: 230 ITGQTICVDGG 240
           ITG+T+ V GG
Sbjct: 241 ITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  117 bits (295), Expect = 5e-32
 Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 23/249 (9%)

Query: 11  DRWSLQGMTALVTGGTKGLGNE-AEL------------------NECLREWKTKCFKVTG 51
           D   L G  A++TG   G+G E A                    N  + E +    +   
Sbjct: 5   DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA 64

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
             CD +S  E   L     S   GK++IL+NN G     KP    M  D       N  S
Sbjct: 65  CRCDITSEQELSALADFALSKL-GKVDILVNNAGGG-GPKPFDMPM-ADFRRAYELNVFS 121

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            +HLSQL  P ++ +G G I+ ++S+         T YA++K A + L +N+A +    N
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           IR+N +AP  I T   +  ++ E   + ++  TP+ R G+P+++++   FLC PAAS+++
Sbjct: 182 IRVNGIAPGAILTDALKSVITPEIEQKMLQ-HTPIRRLGQPQDIANAALFLCSPAASWVS 240

Query: 232 GQTICVDGG 240
           GQ + V GG
Sbjct: 241 GQILTVSGG 249

Length = 255

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  117 bits (294), Expect = 7e-32
 Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 27/253 (10%)

Query: 13  WSLQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGSVC--DA 56
             L+G  A+VTG   G G                A++N    E               D 
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADV 60

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           + RA+ E +++   S F G+L+IL+NN G  +  KP +E   E+   + + N +S Y  +
Sbjct: 61  TKRADVEAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           Q   P ++  G G II ++S  G+      T Y A+KG +    K +A E A  NIR+N 
Sbjct: 120 QALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNC 179

Query: 177 VAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           + P    TPL   ++ +       KF   +    P+ R   P ++++   +L    AS+I
Sbjct: 180 LCPVAGETPLLSMFMGEDTPENRAKFRATI----PLGRLSTPDDIANAALYLASDEASFI 235

Query: 231 TGQTICVDGGFTV 243
           TG  + VDGG  +
Sbjct: 236 TGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 2e-31
 Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 29/253 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKT---KCFKVT 50
            L+G   ++TGG+ GLG                    +E E N+   E K    +   V 
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
           G   D +  ++   L++     F G L+++INN G      P+ E   ED + +++TN  
Sbjct: 64  G---DVTVESDVVNLIQTAVKEF-GTLDVMINNAGIE-NAVPSHEMSLEDWNKVINTNLT 118

Query: 111 SAYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            A+  S+ A    ++    GNII +SSV   +   L   YAA+KG +  + + LA E+A 
Sbjct: 119 GAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAP 178

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR+N++ P  I TP+     +D K   +V+   PM   G+P+E++++ A+L    ASY
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASY 238

Query: 230 ITGQTICVDGGFT 242
           +TG T+  DGG T
Sbjct: 239 VTGITLFADGGMT 251

Length = 261

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  114 bits (288), Expect = 7e-31
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 26/250 (10%)

Query: 15  LQGMTALVTGGTKGLGN------------------EAELNECLREWKTKCFKVTGSVCDA 56
           L+   A++TG + G+G                      ++E + + K+   K      D 
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDI 63

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           S   + +    ++   F G++++L NN G +       EY  +    +M+ +    + ++
Sbjct: 64  SDEQQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMT 122

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           ++  PL+   G G+II  SS  G  +    + Y A KGA+    K++A E+ RD IR N+
Sbjct: 123 KMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANA 181

Query: 177 VAPWFITTPL------TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           +AP  I TPL      T    + + F E  K  TP+ R G+P+EV+ LV FL    +S+I
Sbjct: 182 IAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFI 241

Query: 231 TGQTICVDGG 240
           TG+TI +DGG
Sbjct: 242 TGETIRIDGG 251

Length = 272

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  113 bits (285), Expect = 1e-30
 Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 68  QVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP 121
           QV++LF       G L++L+NN G  + T   ++         M+ N    +   + A P
Sbjct: 63  QVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAP 122

Query: 122 LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWF 181
            + A G G+I+ +SS+ G         Y A+K A+  L + LA E     IR N++AP  
Sbjct: 123 RMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGL 182

Query: 182 ITTPLTEPYLSDEKFLEEVKCRTPM-----ERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
           I TPL    L+  +          +      R G P++V++ V FL    AS+ITGQ +C
Sbjct: 183 IDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFITGQVLC 242

Query: 237 VDGG 240
           VDGG
Sbjct: 243 VDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 5e-30
 Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 30/253 (11%)

Query: 15  LQGMTALVTGGTKGLGNE-AEL--------------NECLREWKTKCFKVTGS-----VC 54
           L G  A+VTG   G+G   A+L               E             G        
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAER--VAAAIAAGGRAFARQG 60

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE-DLSFLMSTNFESAY 113
           D  S    E L+  V++ + G+L++L+NN G  +    TV    E D   +M  N    +
Sbjct: 61  DVGSAEAVEALVDFVAARW-GRLDVLVNNAG--FGCGGTVVTTDEADWDAVMRVNVGGVF 117

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
             ++ A P+++  G G+I+  +S   +        Y A+KGA+  L + +A + A D IR
Sbjct: 118 LWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIR 177

Query: 174 INSVAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           +N+VAP  I TP      +     E   E ++ R PM R G  +EV+    FL    +S+
Sbjct: 178 VNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSF 237

Query: 230 ITGQTICVDGGFT 242
            TG T+ VDGG+ 
Sbjct: 238 ATGTTLVVDGGWL 250

Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  110 bits (277), Expect = 2e-29
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 26/250 (10%)

Query: 13  WSLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCD 55
           +SL+G  ALVTG   GLG                   +E +E  ++ +    +      D
Sbjct: 1   FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTAD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S     + L+      F G ++IL+NN G         E+  +D   +M+ N +S + L
Sbjct: 61  LSDIEAIKALVDSAVEEF-GHIDILVNNAGIIRRAD-AEEFSEKDWDDVMNVNLKSVFFL 118

Query: 116 SQL-AHPLLKASGAGNIILVSSVCGVLSTNLGTI---YAATKGAMNQLAKNLACEWARDN 171
           +Q  A   LK    G II ++S+   LS   G     Y A+K A+  L K LA EWA   
Sbjct: 119 TQAAAKHFLKQGRGGKIINIASM---LSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKG 175

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N++AP ++ T  T+   +DE     +  R P  R G P ++     FL   A+ Y+ 
Sbjct: 176 INVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVN 235

Query: 232 GQTICVDGGF 241
           G T+ VDGG+
Sbjct: 236 GYTLAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  110 bits (276), Expect = 3e-29
 Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 39/259 (15%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTGG +G+G                   NE    E  +E      K      D S +
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            +    + Q +  F G  ++++NN G    T P +E   E+L  + + N +      Q A
Sbjct: 62  DQVFSAIDQAAEKF-GGFDVMVNNAGVAPIT-PILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 120 HPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
               K  G  G II  +S+ G     + + Y++TK A+  L +  A E A   I +N+  
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYC 179

Query: 179 PWFITTPLTEPYLSD-------------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           P  + TP+ E    +             E+F  E+     + RP EP++V+ LV+FL   
Sbjct: 180 PGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA----LGRPSEPEDVAGLVSFLASE 235

Query: 226 AASYITGQTICVDGGFTVN 244
            + YITGQ+I VDGG   N
Sbjct: 236 DSDYITGQSILVDGGMVYN 254

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  110 bits (276), Expect = 3e-29
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 39/260 (15%)

Query: 17  GMTALVTGGTKGLG------------------------NEAELNECLREWKTKCFKVTGS 52
           G  ALVTG T G+G                         EA       +      KV   
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHG---VKVLYH 58

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             D S  A  E ++      F G ++IL+NN G  +   P  ++  E    +++ N  + 
Sbjct: 59  GADLSKPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVA-PIEDFPTEKWDAIIALNLSAV 116

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           +H ++LA P +K  G G II ++SV G++++   + Y A K  +  L K +A E A   +
Sbjct: 117 FHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGV 176

Query: 173 RINSVAPWFITTPLTEPYLSD---------EKFLEEV-KCRTPMERPGEPKEVSSLVAFL 222
             N++ P ++ TPL E  +S          E+   E+   + P ++   P+++     FL
Sbjct: 177 TCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFL 236

Query: 223 CMPAASYITGQTICVDGGFT 242
              AAS ITG  + VDGG+T
Sbjct: 237 ASDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  110 bits (276), Expect = 4e-29
 Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 32/252 (12%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
            A++TG  +G+G                     E      ++E     +       D + 
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
           + + E L+ Q    F G  ++++NN G      P +    EDL  + + N        Q 
Sbjct: 64  KDDVEALIDQAVEKF-GSFDVMVNNAGIA-PITPLLTITEEDLKKVYAVNVFGVLFGIQA 121

Query: 119 AH-PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
           A     K    G II  SS+ GV        Y+A+K A+  L +  A E A   I +N+ 
Sbjct: 122 AARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAY 181

Query: 178 APWFITTPLTEPYLS---------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
           AP  + T + +             + +   E     P+ R  EP++V+ LV+FL    + 
Sbjct: 182 APGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDSD 241

Query: 229 YITGQTICVDGG 240
           YITGQTI VDGG
Sbjct: 242 YITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 7e-29
 Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 42/255 (16%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQG TAL+TGGT G+G                   + A L     E       +     D
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIR---AD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
           A   A ++ L + ++  F G+L+ +  N G      P  ++         +TN +  Y L
Sbjct: 61  AGDVAAQKALAQALAEAF-GRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYFL 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLG----TIYAATKGAMNQLAKNLACEWARDN 171
            Q   PLL A+ A +I+L     G ++ ++G    ++YAA+K A+  LAK L+ E     
Sbjct: 119 IQALLPLL-ANPA-SIVL----NGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRG 172

Query: 172 IRINSVAPWFITTPL------TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           IR+N+V+P  + TPL       E  L  +    +++   P+ R G P+E++  V +L   
Sbjct: 173 IRVNAVSPGPVQTPLYGKLGLPEATL--DAVAAQIQALVPLGRFGTPEEIAKAVLYLASD 230

Query: 226 AASYITGQTICVDGG 240
            +++I G  I VDGG
Sbjct: 231 ESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  108 bits (271), Expect = 1e-28
 Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 38/252 (15%)

Query: 21  LVTGGTKGLG--------------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+TGG  GLG                           +A L E   + +    K      
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKA----- 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  A+ E  +      F G+++   NN G       T ++ A++   ++S N    ++
Sbjct: 62  DVSDEAQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
             +    +++  G+G I+  +SV G+      + YAA K  +  L +N A E+ +  IRI
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180

Query: 175 NSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
           N++AP  I TP+ E  L        E+  EE     PM+R GEP+EV+++VAFL    A 
Sbjct: 181 NAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAG 240

Query: 229 YITGQTICVDGG 240
           Y+    + +DGG
Sbjct: 241 YVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 3e-28
 Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 37/264 (14%)

Query: 13  W-SLQGMTALVTGGTKGLGNEAELNECL-REWKTKCFKVTGS----------VCDASSRA 60
           W +LQG   +VTGG+ G+G  A + E L          + G             D SS  
Sbjct: 4   WLNLQGKIIIVTGGSSGIG-LAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAE 62

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTN--------YTTKPTVEYMAEDLSFLMSTNFESA 112
           E    + ++   F G+++ L+NN G N               E        + + N +  
Sbjct: 63  EVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGV 121

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           + +SQ     +     G I+ +SS  G+  +   + YAATK A+N   ++ A E  + NI
Sbjct: 122 FLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNI 181

Query: 173 RINSVAPWFI-TTPLTEP-------YLSDEKFLEEV------KCRTPMERPGEPKEVSSL 218
           R+  VAP  +  T L  P       Y      +E++          P+ R G+  EV+ L
Sbjct: 182 RVVGVAPGILEATGLRTPEYEEALAYTRGIT-VEQLRAGYTKTSTIPLGRSGKLSEVADL 240

Query: 219 VAFLCMPAASYITGQTICVDGGFT 242
           V +L    ASYITG T  + GG T
Sbjct: 241 VCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  107 bits (269), Expect = 3e-28
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 39/257 (15%)

Query: 16  QGMTALVTGGTKGLGNE------------------AELNECLREWKTKCFKVT--GSVCD 55
           +    L+TG    +G                    A   E L+E  T  +K        D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTN--YTTKPTVEYMAEDLSFLMSTNFESAY 113
            +S+   ++L++     F G+++ILINN   +         E+  E  + +++ N   A+
Sbjct: 61  ITSKESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVL----------STNLGTIYAATKGAMNQLAKNL 163
             SQ    L K  G G+II ++S+ GV+                 Y+  K  +  L K L
Sbjct: 120 LCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179

Query: 164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           A  +A   IR+N+++P  I            +FLE+   + P++R   P+++   + FL 
Sbjct: 180 AKYYADTGIRVNAISPGGILNN------QPSEFLEKYTKKCPLKRMLNPEDLRGAIIFLL 233

Query: 224 MPAASYITGQTICVDGG 240
             A+SY+TGQ + +DGG
Sbjct: 234 SDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 1e-27
 Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 26/252 (10%)

Query: 14  SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF----------KVTGSV--------CD 55
            L G  A+VTGG   +G  A +   L     +             V  S+         D
Sbjct: 3   GLAGKVAIVTGGATLIG--AAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A  E+ +  V + F G+++IL+N   T Y     +     D    +  N  SA  L
Sbjct: 61  ITDDAAIERAVATVVARF-GRVDILVNLACT-YL-DDGLASSRADWLAALDVNLVSAAML 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +Q AHP L   G G I+  +S+    +     +Y A+K A+ QL +++A + A D IR+N
Sbjct: 118 AQAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVN 176

Query: 176 SVAP-WFITTPLTEPYLSDEKFLEEVKCRT-PMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           SV+P W  +  + E    D    + V      + R G+P+EV+ +VAFLC  AAS++TG 
Sbjct: 177 SVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGA 236

Query: 234 TICVDGGFTVNG 245
              VDGG++  G
Sbjct: 237 DYAVDGGYSALG 248

Length = 261

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 1e-27
 Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 33/248 (13%)

Query: 14  SLQGMTALVTGGTKGLGNE---------AELNECLREWKTKCFKVTGSV-----CDASSR 59
            L G   LVTGGT+G+G           A +  C R        V G        D    
Sbjct: 3   DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR---RAPETVDGRPAEFHAADVRDP 59

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST---NFESAYH 114
            +   L+  +     G+L++L+NN G +    P    +A + S  F       N  +   
Sbjct: 60  DQVAALVDAIVERH-GRLDVLVNNAGGS----PYA--LAAEASPRFHEKIVELNLLAPLL 112

Query: 115 LSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGT-IYAATKGAMNQLAKNLACEWARDNI 172
           ++Q A+ +++   G G+I+ + SV G   +  GT  Y A K  +  L ++LA EWA   +
Sbjct: 113 VAQAANAVMQQQPGGGSIVNIGSVSGRRPSP-GTAAYGAAKAGLLNLTRSLAVEWAPK-V 170

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N+V    + T  +E +  D + +  V    P+ R   P +++    FL    ASY++G
Sbjct: 171 RVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSG 230

Query: 233 QTICVDGG 240
             + V GG
Sbjct: 231 ANLEVHGG 238

Length = 252

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  105 bits (264), Expect = 1e-27
 Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 36/257 (14%)

Query: 15  LQGMTALVTGGTKGLG-----------------NEAEL-NECLREWKTKCFKVTGSVCDA 56
            +G   +VTG  +G+G                 + +EL +E L E             D 
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDAAHVHTADL 61

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
            + A  + +++     F G++++LINNVG     KP   Y  E +   +  +        
Sbjct: 62  ETYAGAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 117 QLAHPLLKASGAGNIILVSSVC--GVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           +   P +     G I+ VSS+   G+        Y+A KG +N L  +LA E ARD IR+
Sbjct: 121 RAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIRV 176

Query: 175 NSVAP-------WFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           N+VAP         I          +    ++ +++    + M R G   E    + FL 
Sbjct: 177 NAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFLA 236

Query: 224 MPAASYITGQTICVDGG 240
              ASYITG  + V GG
Sbjct: 237 SDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  106 bits (265), Expect = 2e-27
 Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 41/267 (15%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL+   A++TGGT  LG                   N+ + ++  +E      +      
Sbjct: 2   SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNY-------------TTKPTVEYMAEDL 101
           D   RA  E+  +++ + F G ++ILIN  G N+             T +   +   E  
Sbjct: 62  DVLDRASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 102 SFLMSTNFESAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            F+   N   ++  SQ     +L+  G G+II +SS+           Y+A K A++   
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKG-GSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDE-----KFLEEVKCRTPMERPGEPKEV 215
           + LA E+A   +R+N++AP F  TP     L +          ++  RTPM R G+P+E+
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEEL 239

Query: 216 SSLVAFLC-MPAASYITGQTICVDGGF 241
              + FL    A+S++TG  I VDGGF
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGGF 266

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  104 bits (262), Expect = 3e-27
 Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 22/249 (8%)

Query: 15  LQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCF---KVTGSVCDAS 57
           L G  A++TGG  G+G                A++++   +          ++   CD +
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDVT 61

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV-EYMAEDLSFLMSTNFESAYHLS 116
             A+    +    + F G+L+I+ NN G       ++ E   E+   ++  N   A+  +
Sbjct: 62  VEADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGT 120

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           + A  ++  +  G+I+ V+SV GV+       Y A+K A+  L ++ A E     IR+N 
Sbjct: 121 KHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNC 180

Query: 177 VAPWFITTPL-TEPYLSDEKFLEEV--KCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           V+P+ + TPL T  +  +++ +EE              P+++++ V +L    + Y++GQ
Sbjct: 181 VSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRYVSGQ 240

Query: 234 TICVDGGFT 242
            + VDGG T
Sbjct: 241 NLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  103 bits (259), Expect = 7e-27
 Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 31/243 (12%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
            ALVTG  K +G                    +EAE      E             D S 
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLSD 61

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
            A    L+      F G+ ++L+NN    Y T    +   +  + L   N ++ Y L Q 
Sbjct: 62  FAACADLVAAAFRAF-GRCDVLVNNASAFYPTPL-GQGSEDAWAELFGINLKAPYLLIQA 119

Query: 119 AHPLLKASGAGNII-LVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
               L  S  G+II ++ ++     T     Y  +K A+  L ++ A E A  NIR+N +
Sbjct: 120 FARRLAGSRNGSIINIIDAMTDRPLTGY-FAYCMSKAALEGLTRSAALELA-PNIRVNGI 177

Query: 178 APWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
           AP  I  P       D ++ E    + P++R    +E++  V FL     +YITGQ I V
Sbjct: 178 APGLILLPED----MDAEYRENALRKVPLKRRPSAEEIADAVIFLLDS--NYITGQIIKV 231

Query: 238 DGG 240
           DGG
Sbjct: 232 DGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 9e-27
 Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 21/252 (8%)

Query: 11  DRWSLQGMTALVTGGTKGLGN---------EAEL----------NECLREWKTKCFKVTG 51
           D +SL G   L+TG  +G+G           AE+             + + + +  K   
Sbjct: 3   DLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHA 62

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           +  + + + E E  ++ +     G +++LINN G      P  E+  ++ + +++ N  +
Sbjct: 63  APFNVTHKQEVEAAIEHIEKDI-GPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTA 120

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            + +SQ     +    AG II + S+   L  +  T YAA+KGA+  L + +  E AR N
Sbjct: 121 VFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHN 180

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I++N +AP +  T +T+  + DE F   +  RTP  R G+P+E+     FL   A+ ++ 
Sbjct: 181 IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVN 240

Query: 232 GQTICVDGGFTV 243
           G  + VDGG  V
Sbjct: 241 GHLLFVDGGMLV 252

Length = 254

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  103 bits (258), Expect = 1e-26
 Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 26/249 (10%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV----------CDASSRAEREK 64
           L+   A+VTGG++G+G    +   L+E  +                    D S++ +  K
Sbjct: 4   LKDKVAIVTGGSQGIG--KAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIK 61

Query: 65  LMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLL 123
            +  V S + G+++IL+NN G  +Y     VE   ++   +++ N    + +S+   P +
Sbjct: 62  GIDYVISKY-GRIDILVNNAGIESYGAIHAVE--EDEWDRIINVNVNGIFLMSKYTIPYM 118

Query: 124 KASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFIT 183
                G II ++SV     T     Y  +K A+  L +++A ++A   IR  +V P  I 
Sbjct: 119 LKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYA-PTIRCVAVCPGSIR 177

Query: 184 TPLTEPYL-----SD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           TPL E         D    E+ + E     PM+R G+P+EV+ +VAFL    AS+ITG+ 
Sbjct: 178 TPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGEC 237

Query: 235 ICVDGGFTV 243
           + VDGG   
Sbjct: 238 VTVDGGLRA 246

Length = 258

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score =  102 bits (256), Expect = 2e-26
 Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 38/217 (17%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S+   R   +  V +  +G L+ L+N  G   TT             ++  N+    
Sbjct: 38  ADLSTPEGRAAAIADVLARCSGVLDGLVNCAGVGGTT---------VAGLVLKVNYFGLR 88

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCG----------VLSTNLGT---------------- 147
            L +   P L+       ++VSS+ G            +   GT                
Sbjct: 89  ALMEALLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGY 148

Query: 148 -IYAATKGAMNQLAKNLACEW-ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEV-KCRT 204
             YA +K A+    +  A  W     +R+N+VAP  + TP+ + +L D +  E V    T
Sbjct: 149 LAYAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVT 208

Query: 205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           PM R  EP E++ ++AFL   AAS+I G  + VDGG 
Sbjct: 209 PMGRRAEPDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  102 bits (255), Expect = 3e-26
 Identities = 72/242 (29%), Positives = 110/242 (45%), Gaps = 26/242 (10%)

Query: 20  ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           ALVTGG  G+G                    NE      L+E     F       D SS 
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAYHLSQL 118
              +  + +V +   G +++L+NN G   T   T + M  E  S ++ TN  S ++++Q 
Sbjct: 63  ESCKAAVAKVEAEL-GPIDVLVNNAGI--TRDATFKKMTYEQWSAVIDTNLNSVFNVTQP 119

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
               ++  G G II +SSV G       T Y+A K  M    K LA E A   + +N+++
Sbjct: 120 VIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTIS 179

Query: 179 PWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD 238
           P +I T +       E  L  +  + P+ R G P+E+++ VAFL    A YITG T+ ++
Sbjct: 180 PGYIATDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN 237

Query: 239 GG 240
           GG
Sbjct: 238 GG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  102 bits (255), Expect = 3e-26
 Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 44/259 (16%)

Query: 15  LQGMTALVTGGTKGLGNEA-----------------------ELNECLREWKTKCFKVTG 51
             G  ALVTG ++G+G                          E  E +     K   V  
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           +V D     + +++  Q+   F G+L++ +NN  +    +P +E       + M+ N ++
Sbjct: 62  NVGD---VEKIKEMFAQIDEEF-GRLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKA 116

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-----YAA---TKGAMNQLAKNL 163
               +Q A  L++  G G II +SS        LG+I     Y     +K A+  L + L
Sbjct: 117 LLFCAQEAAKLMEKVGGGKIISLSS--------LGSIRYLENYTTVGVSKAALEALTRYL 168

Query: 164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           A E A   I +N+V+   + T   + + + E+ LE+ + +TP  R  EP++V++ V FLC
Sbjct: 169 AVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLC 228

Query: 224 MPAASYITGQTICVDGGFT 242
            P A  I GQTI VDGG +
Sbjct: 229 SPEADMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 3e-26
 Identities = 78/265 (29%), Positives = 119/265 (44%), Gaps = 55/265 (20%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV--------------------C 54
           L G  ALVTGGTKG+G  A     L E   +      S                     C
Sbjct: 7   LAGKRALVTGGTKGIG--AATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGC 64

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA---EDLSFLMSTNFES 111
            A +RA  E+L         G ++IL++ +G   ++ P   + A   E+    ++ N  +
Sbjct: 65  AAVARAVLERL---------GGVDILVHVLGG--SSAPAGGFAALTDEEWQDELNLNLLA 113

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVL----STNLGTIYAATKGAMNQLAKNLACEW 167
           A  L +   P + A G+G II V+S+   L    ST   T YAA K A++  +K+L+ E 
Sbjct: 114 AVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPEST---TAYAAAKAALSTYSKSLSKEV 170

Query: 168 ARDNIRINSVAPWFITTPLTE------------PYLSDEKFLEEVKCRTPMERPGEPKEV 215
           A   +R+N+V+P +I T                 Y   ++ + +     P+ RP EP+EV
Sbjct: 171 APKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEV 230

Query: 216 SSLVAFLCMPAASYITGQTICVDGG 240
           + L+AFL    A+ ITG    +DGG
Sbjct: 231 AELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  101 bits (253), Expect = 5e-26
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 30/251 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
              G  ALVTG  KG+G                    +A+L+  +RE    C  +     
Sbjct: 4   DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S     E+ +  V     G +++L+NN       +P +E   E        N  +  H
Sbjct: 60  DLSDWDATEEALGSV-----GPVDLLVNNAAV-AILQPFLEVTKEAFDRSFDVNVRAVIH 113

Query: 115 LSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +SQ+    + A G  G+I+ VSS     +    T+Y +TK A++ L K +A E     IR
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIR 173

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +NSV P  + T +     SD +  +++  R P+ +  E ++V + + FL    +S  TG 
Sbjct: 174 VNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGS 233

Query: 234 TICVDGGFTVN 244
           T+ VDGGF  +
Sbjct: 234 TLPVDGGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 6e-26
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%)

Query: 8   DRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV------------------ 49
                + L G  A+VTGG  G+G+          +  K  +V                  
Sbjct: 6   QFDLAFDLSGKVAVVTGGASGIGHA-----IAELFAAKGARVALLDRSEDVAEVAAQLLG 60

Query: 50  ---TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS 106
               G VCD S     E  +  V S F G+++IL+N+ G      P  +   ED    + 
Sbjct: 61  GNAKGLVCDVSDSQSVEAAVAAVISAF-GRIDILVNSAGVALLA-PAEDVSEEDWDKTID 118

Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            N + ++ ++Q     + A+G G I+ ++S  GV++      Y A+K  +  + K LA E
Sbjct: 119 INLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALE 178

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           W    I +N+++P  + T L +   + EK  E  K   P  R   P+E+++   FL   A
Sbjct: 179 WGPYGITVNAISPTVVLTELGKKAWAGEKG-ERAKKLIPAGRFAYPEEIAAAALFLASDA 237

Query: 227 ASYITGQTICVDGGFTV 243
           A+ ITG+ + +DGG+T+
Sbjct: 238 AAMITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  101 bits (252), Expect = 7e-26
 Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 4/189 (2%)

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
           A S  + E+L+  V     G +++L++N        P       D+           + L
Sbjct: 53  ALSEQKPEELVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFAL 111

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            Q A   +K +G G+II ++S          ++Y   + A   LA++LA E +RDNI + 
Sbjct: 112 LQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVY 171

Query: 176 SVAPWFITTPL---TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           ++ P F  +P    T  + ++ +  E VK   P+ R G P E+ +LVAFL    A  ITG
Sbjct: 172 AIGPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPITG 231

Query: 233 QTICVDGGF 241
           Q     GG+
Sbjct: 232 QFFAFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  101 bits (253), Expect = 7e-26
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 11/220 (5%)

Query: 29  LGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT-N 87
           L    +L+E  R  +    KV     D    AE   +++     F G+L++++ N G  +
Sbjct: 47  LATREDLDETARLVEALGRKVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLS 105

Query: 88  YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLG 146
           Y    + E   E    ++  N    +   +   P +++    G+II+ SSV G+ +    
Sbjct: 106 YG--RSWELSEEQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGL 163

Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC---- 202
             YAA K  +  L K LA E A   IR+NS+ P+ + TP+  P    E FL+  +     
Sbjct: 164 AHYAAAKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAF 223

Query: 203 RTPMERPG--EPKEVSSLVAFLCMPAASYITGQTICVDGG 240
              +   G   P++V+  V +L    + YITG  + VD G
Sbjct: 224 MPALPVSGFVPPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (250), Expect = 1e-25
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 65  LMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL 122
           L   +  LF+    ++IL N  G     KP ++   E+   +  TN  S + L++   P 
Sbjct: 54  LSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQ 113

Query: 123 LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI 182
           +    +G II + S+   ++   G  Y A+K A+    K LA ++A+D I++  +AP  +
Sbjct: 114 MLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAV 173

Query: 183 TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
            TP+T          + V   TP++R  EP+EV+ L  FL    A Y+ G  + +DGG+T
Sbjct: 174 KTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGWT 233

Query: 243 V 243
           +
Sbjct: 234 L 234

Length = 235

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (251), Expect = 1e-25
 Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 41/261 (15%)

Query: 13  WSLQGMTALVTGGTKGLGNE--------------------AELNECLREWKTKCFKVTGS 52
           +SL+    +VTG  +G+G                       E+NE L+  K    +  G 
Sbjct: 2   YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGV 61

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTNF 109
           + D S+R   E L K     + G  +IL+NN G    +     ++  D   +   +ST+F
Sbjct: 62  LADVSTREGCETLAKATIDRY-GVADILVNNAGLGLFSP----FLNVDDKLIDKHISTDF 116

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
           +S  + SQ     ++  GA  I+ ++SV G+      +IY A K A+  L K LA E A 
Sbjct: 117 KSVIYCSQELAKEMREGGA--IVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Query: 170 DNIRINSVAPWFITTPLTEPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
             IR+N++AP F+ T L E       +S+++F E+    T M +  +P+EV+  VA +  
Sbjct: 175 -KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF---TLMGKILDPEEVAEFVAAILK 230

Query: 225 PAASYITGQTICVDGGFTVNG 245
             +  ITGQ   +D G ++ G
Sbjct: 231 IES--ITGQVFVLDSGESLKG 249

Length = 252

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  100 bits (250), Expect = 2e-25
 Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 46/255 (18%)

Query: 15  LQGMTALVTGGTKGLGNE--------------------------AELNECLREWKTKCFK 48
           L G  ALVTG + G+G E                          AEL E     + K F 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGE-----RVKIFP 58

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT--VEYMAEDLSFLMS 106
                 + S R E + L ++  +   G ++IL+NN G    TK    V    ED   ++ 
Sbjct: 59  A-----NLSDRDEVKALGQKAEADLEG-VDILVNNAGI---TKDGLFVRMSDEDWDSVLE 109

Query: 107 TNFESAYHLS-QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLAC 165
            N  + + L+ +L HP+++    G II ++SV GV        Y A+K  M   +K+LA 
Sbjct: 110 VNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQ 168

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           E A  N+ +N VAP FI + +T     ++K  E +    PM+R G   EV+S VA+L   
Sbjct: 169 EIATRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASS 226

Query: 226 AASYITGQTICVDGG 240
            A+Y+TGQTI V+GG
Sbjct: 227 EAAYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =   99 bits (249), Expect = 2e-25
 Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 30/254 (11%)

Query: 11  DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAE--------- 61
           D +SL+G  A+VTG   GLG    L       +  C  V  ++ + +   E         
Sbjct: 4   DAFSLEGKVAVVTGCDTGLGQGMALGLA----EAGCDIVGINIVEPTETIEQVTALGRRF 59

Query: 62  ---REKLMKQ--VSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
                 L K   + +L        G ++IL+NN G     +  +E+  +D   +M+ N +
Sbjct: 60  LSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGL-IRREDAIEFSEKDWDDVMNLNIK 118

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT---IYAATKGAMNQLAKNLACEW 167
           S + +SQ A     A G G  I+  ++  +LS   G     Y A+K  +  + + +A EW
Sbjct: 119 SVFFMSQAAAKHFIAQGNGGKII--NIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEW 176

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A+ NI +N++AP ++ T  T+   +DE+   E+  R P  R G P ++   V FL   A+
Sbjct: 177 AKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSAS 236

Query: 228 SYITGQTICVDGGF 241
            YI G TI VDGG+
Sbjct: 237 DYINGYTIAVDGGW 250

Length = 253

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 99.4 bits (248), Expect = 3e-25
 Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 33/247 (13%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV-CDA 56
           G + LVTG + G+G                   N A L+    E  T C  +   V  DA
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE--TGCEPLRLDVGDDA 66

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           + RA              G  + L+N  G   + +  ++  AE    +M+ N   A  ++
Sbjct: 67  AIRAALAAA---------GAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVA 116

Query: 117 Q-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           + +A  ++ A   G+I+ VSS   ++       Y A+K A++ + + L  E     IR+N
Sbjct: 117 RHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVN 176

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           SV P    TP+     SD +    +    P+ R  E  +V++ + FL   AAS ++G ++
Sbjct: 177 SVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSL 236

Query: 236 CVDGGFT 242
            VDGG+T
Sbjct: 237 PVDGGYT 243

Length = 245

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 6e-25
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 33/246 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SLQG    +TGG  GLG                     A L++ L        ++ G   
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D        + + +V+  F G+L+ L+N  G  +      +  A+    +   N ++  +
Sbjct: 62  DLVDPQAARRAVDEVNRQF-GRLDALVNIAGA-FVWGTIADGDADTWDRMYGVNVKTTLN 119

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            S+ A P L ASG G I+ + +   + +      YAA K  + +L + LA E     I +
Sbjct: 120 ASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITV 179

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  I TP     + D  F   V           P+++++++AFL    A  ITG +
Sbjct: 180 NAVLPSIIDTPPNRADMPDADFSRWVT----------PEQIAAVIAFLLSDEAQAITGAS 229

Query: 235 ICVDGG 240
           I VDGG
Sbjct: 230 IPVDGG 235

Length = 239

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 98.9 bits (247), Expect = 6e-25
 Identities = 73/267 (27%), Positives = 111/267 (41%), Gaps = 41/267 (15%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  AL+TGG  G+G                   +  +L    + +      V G   D
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG---D 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAEDLS--F--LMSTNFE 110
            +S A+ ++ + Q    F GKL+  + N G  +Y T   V+  AE L   F  + + N +
Sbjct: 61  VTSYADNQRAVDQTVDAF-GKLDCFVGNAGIWDYNT-SLVDIPAETLDTAFDEIFNVNVK 118

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
                ++ A P LKASG G++I   S         G +Y A+K A+  L + LA E A  
Sbjct: 119 GYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK 177

Query: 171 NIRINSVAPWFITTPLTEP--------YLSD-EKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            IR+N VAP    T L  P         +SD     + +   TP++   +P++ +     
Sbjct: 178 -IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVL 236

Query: 222 LCMPAAS-YITGQTICVDGGFTVNGFF 247
           L     S  +TG  I  DGG  + G  
Sbjct: 237 LASRRNSRALTGVVINADGGLGIRGIR 263

Length = 263

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 7e-25
 Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 30/252 (11%)

Query: 15  LQGMTALVTGGTKGLG--------NE------AELNECLREWKTKCFKVTGS-----VCD 55
                A+VTG   G+G         E      A++N    E   K     G        D
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP----TVEYMAEDLSFLMSTNFES 111
            S     + +     S F G ++ L+NN       K     TV +  +     MS N + 
Sbjct: 64  VSDPDSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPW--DYYKKFMSVNLDG 120

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           A   ++  +  +   G G I+  SS    L +N    Y   K  +N L + LA E    N
Sbjct: 121 ALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSN---FYGLAKVGLNGLTQQLARELGGMN 177

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           IR+N++AP  I T  T   ++ ++F+ ++    P+ R G P+++  +  FL    AS+IT
Sbjct: 178 IRVNAIAPGPIDTEATRT-VTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWIT 236

Query: 232 GQTICVDGGFTV 243
           GQ   VDGG  +
Sbjct: 237 GQIFNVDGGQII 248

Length = 250

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 97.7 bits (244), Expect = 1e-24
 Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 28/193 (14%)

Query: 63  EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL 122
            +L+    + F G+L+ L+NN  + Y T P           L ++N ++ + LSQ A P 
Sbjct: 73  PELVAACVAAF-GRLDALVNNASSFYPT-PLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130

Query: 123 LKASGAGNIILVSSVCGVLSTNLG-----------TIYAATKGAMNQLAKNLACEWARDN 171
           L+    G I+           N+             +Y A K A+  L ++LA E A   
Sbjct: 131 LRKQR-GAIV-----------NITDIHAERPLKGYPVYCAAKAALEMLTRSLALELA-PE 177

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +R+N+VAP  I  P       DE+  + +  RTP++R G P++++  V FL +  AS+IT
Sbjct: 178 VRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFL-LADASFIT 235

Query: 232 GQTICVDGGFTVN 244
           GQ + VDGG ++ 
Sbjct: 236 GQILAVDGGRSLT 248

Length = 249

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 97.4 bits (242), Expect = 2e-24
 Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 27/249 (10%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECL-REWKTKCFKVTGSV 53
            L G  A+VTGG KG+G                   +  E  E L  E   +   V    
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-EDLSFLMSTNFESA 112
            D S   +  +L+++  + F GK++IL+NN G   T   T + +  ED   ++  N  S 
Sbjct: 63  ADVSKVEDANRLVEEAVNHF-GKVDILVNNAGI--TRDRTFKKLNREDWERVIDVNLSSV 119

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           ++ +    P +  +  G II +SS+ G       T Y+A K  M    K+LA E A+ N+
Sbjct: 120 FNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNV 179

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N++ P FI T +       E+  +++  + P +R G+  E++  V +LC   A YITG
Sbjct: 180 TVNAICPGFIDTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITG 236

Query: 233 QTICVDGGF 241
           Q + ++GG 
Sbjct: 237 QQLNINGGL 245

Length = 247

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 97.1 bits (242), Expect = 2e-24
 Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 21/235 (8%)

Query: 19  TALVTGGTKGLGNEAELNECLREWK--------TKCFKVTGSVCDASSRAEREKLMKQVS 70
           T LVTG TKG+G    L       +           F      CD +   +    + Q++
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQIN 64

Query: 71  SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGN 130
                 ++ ++NNVG     +P  +     L  +   N  +A  ++Q     +K    G 
Sbjct: 65  E--IHPVDAIVNNVGI-ALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGR 121

Query: 131 IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL---T 187
           I+ + S   +      T Y+A K A+    +  A E A   I +N+VAP  I T L   T
Sbjct: 122 IVNICSR-AIFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT 180

Query: 188 EPYLSDE--KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
            P  S+E  + L  +    PM R G P+EV++ +AFL    A +ITGQ + VDGG
Sbjct: 181 RPVGSEEEKRVLASI----PMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 96.8 bits (241), Expect = 3e-24
 Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 27/248 (10%)

Query: 16  QGMTALVTGGTKGLGNEA--------------ELNECLREWKTKCFKVTGSVCDASSRAE 61
            G  AL+T   +G+G                 ++NE   +   +   +T  V D + + +
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGITTRVLDVTDKEQ 60

Query: 62  REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE-DLSFLMSTNFESAYHLSQLAH 120
              L K+      G++++L N  G  +    ++    + D  F M+ N  S Y + +   
Sbjct: 61  VAALAKEE-----GRIDVLFNCAG--FVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVL 113

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
           P + A   G+II +SSV   +       +Y+ TK A+  L K++A ++A+  IR N++ P
Sbjct: 114 PKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICP 173

Query: 180 WFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
             + TP  E  +      E+ L+    R P+ R   P+EV++L  +L    ++Y+TG  +
Sbjct: 174 GTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTGTAV 233

Query: 236 CVDGGFTV 243
            +DGG+++
Sbjct: 234 VIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  100 bits (252), Expect = 3e-24
 Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 35/259 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G  ALVTG   G+G                   +E        E      +  G  C
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG-GPDRALGVAC 477

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  A  +   ++ +  F G ++I+++N G    + P  E   ED       N    + 
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNAG-IAISGPIEETSDEDWRRSFDVNATGHFL 535

Query: 115 LSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +++ A  ++KA G G +I+ ++S   V        Y A K A   L + LA E   D IR
Sbjct: 536 VAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIR 595

Query: 174 INSVAP---------W---FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           +N V P         W   +I        LS+E+  E  + R  ++R   P++V+  V F
Sbjct: 596 VNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF 655

Query: 222 LCMPAASYITGQTICVDGG 240
           L     S  TG  I VDGG
Sbjct: 656 LASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 97.0 bits (242), Expect = 4e-24
 Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 45/263 (17%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV-- 53
           L G  ALVTG  +G+G                   + A               V G+   
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD---VAGARVL 61

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
               D +  A     +      F G L++L+NN G N    P +    ED     + + +
Sbjct: 62  AVPADVTDAASVAAAVAAAEEAF-GPLDVLVNNAGINVFADP-LAMTDEDWRRCFAVDLD 119

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI------YAATKGAMNQLAKNLA 164
            A++  +   P +   G G+I+       + ST+   I      Y   K  +  L + L 
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIV------NIASTHAFKIIPGCFPYPVAKHGLLGLTRALG 173

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT----PMERPGEPKEVSSLVA 220
            E+A  N+R+N++AP +I T LTE + + +      +  T    PM+R G P+EV+    
Sbjct: 174 IEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAV 233

Query: 221 FLCMPAASYITGQTICVDGGFTV 243
           FL    A +I    I +DGG +V
Sbjct: 234 FLASDEAPFINATCITIDGGRSV 256

Length = 260

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 96.9 bits (241), Expect = 4e-24
 Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 32/259 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +L G TA+VTG   G+G                   N+   N    E      K  G   
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D ++       + +V+  F G ++IL++N G      P   Y   D   + + + + A+ 
Sbjct: 64  DVTNEDAVNAGIDKVAERF-GSVDILVSNAGIQIVN-PIENYSFADWKKMQAIHVDGAFL 121

Query: 115 LSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            ++ A   + K    G +I + SV    ++ L + Y   K  +  LA+ LA E A+ N+R
Sbjct: 122 TTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVR 181

Query: 174 INSVAPWFITTPLTEPYLSDEK-----FLEEVKCR-----TPMERPGEPKEVSSLVAFLC 223
            + V P F+ TPL +  + ++        EEV  +     T        ++V+  V FL 
Sbjct: 182 SHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS 241

Query: 224 MPAASYITGQTICVDGGFT 242
              ++ +TGQ+  V  G+ 
Sbjct: 242 SFPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 4e-24
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 35/255 (13%)

Query: 15  LQGMTALVTGGTKGLGN---------------------EAELNECLREWKTKCFKVTGSV 53
           L+    +VTGG  G+G                      + E  E LR  + +   V   +
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDL 64

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D    A+    ++Q  + F G+++ L+NN G N      +E   E     +  N    Y
Sbjct: 65  TDD---AQCRDAVEQTVAKF-GRIDGLVNNAGVN--DGVGLEAGREAFVASLERNLIHYY 118

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            ++    P LKAS  G I+ +SS   +      + YAA KGA   L +  A   A+D +R
Sbjct: 119 VMAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVR 177

Query: 174 INSVAPWFITTPLTEPYLS-----DEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAA 227
           +N+V P  + TPL E +++     + K L  +  + P+  R    +E++    FL    +
Sbjct: 178 VNAVIPAEVMTPLYENWIATFDDPEAK-LAAITAKIPLGHRMTTAEEIADTAVFLLSERS 236

Query: 228 SYITGQTICVDGGFT 242
           S+ TGQ + VDGG+ 
Sbjct: 237 SHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 7e-24
 Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 21/251 (8%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G  A++TG + G+G                    +AEL++ + E + +  +      
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D    A  + L+      F G L+I  NN GT     P  E   E     ++TN  SA+ 
Sbjct: 63  DVRDEAYAKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFL 121

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT-IYAATKGAMNQLAKNLACEWARDNIR 173
            ++   P + A G G++I  S+  G  +   G   YAA+K  +  L + LA E+    IR
Sbjct: 122 GAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIR 181

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P    TP+        + L  V     ++R  +P+E++    FL   AAS++TG 
Sbjct: 182 VNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGT 241

Query: 234 TICVDGGFTVN 244
            + VDGG ++ 
Sbjct: 242 ALLVDGGVSIT 252

Length = 254

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 28/203 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAEL----NECLREWKTKCFKVTG 51
           LQG   ++TG + G+G                    E  L    +ECL         V  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D S   + E+++++   LF G L+ILINN G +  +    +   +    +M  N+  
Sbjct: 61  ---DMSDLEDAEQVVEEALKLF-GGLDILINNAGISMRS-LFHDTSIDVDRKIMEVNYFG 115

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              L++ A P L     G+I++VSS+ G +     T YAA+K A+     +L  E +  N
Sbjct: 116 PVALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPN 175

Query: 172 IRINSVAPWFITTPLTEPYLSDE 194
           I +  V P  I T +    LS +
Sbjct: 176 ISVTVVCPGLIDTNIAMNALSGD 198

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 95.5 bits (237), Expect = 1e-23
 Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 27/254 (10%)

Query: 11  DRWSLQGMTALVTGGTKGLGNEAEL---------------NECLREWKTKCFKVTGSV-- 53
           D + L G  AL+TG + G+G    L                + L +   +     G V  
Sbjct: 3   DLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVP 62

Query: 54  --CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
             CD S   +   ++ QV++   G ++I + N G   T  P ++   E+   L +TN   
Sbjct: 63  VCCDVSQHQQVTSMLDQVTAELGG-IDIAVCNAGI-ITVTPMLDMPLEEFQRLQNTNVTG 120

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTI--YAATKGAMNQLAKNLACEWA 168
            +  +Q A   ++K    G II  +S+ G +      +  Y A+K A+  L K +A E A
Sbjct: 121 VFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELA 180

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              IR+NSV+P +I T L EP  ++ + L E K   P+ R G P+E++ L  +L   A+S
Sbjct: 181 PHKIRVNSVSPGYILTELVEP-YTEYQPLWEPK--IPLGRLGRPEELAGLYLYLASEASS 237

Query: 229 YITGQTICVDGGFT 242
           Y+TG  I +DGG+T
Sbjct: 238 YMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 94.8 bits (236), Expect = 2e-23
 Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 45/263 (17%)

Query: 19  TALVTGGTKGLGN------------------------EAELNECLREW-KTKCFKVTGSV 53
            A+VTG ++G+G                            + E L    +   F+     
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQ----- 57

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFES 111
            D    ++ E L+ Q    F G+L+ L+NN G     +  +  + ED SF  L++ N   
Sbjct: 58  ADIGELSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTED-SFDRLIAINLRG 115

Query: 112 AYHLSQ------LAHPLLKASGAGNIILVSSV-CGVLSTNLGTIYAATKGAMNQLAKNLA 164
            + L+Q      +  P        +II V+S+   ++S N G  Y  +K  ++   + LA
Sbjct: 116 PFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGE-YCISKAGLSMATRLLA 174

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC-RTPMERPGEPKEVSSLVAFLC 223
              A + I ++ + P  I T +T P    EK+ E +     P+ R G+P++++  V  L 
Sbjct: 175 YRLADEGIAVHEIRPGLIHTDMTAP--VKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLA 232

Query: 224 MPAASYITGQTICVDGGFTVNGF 246
                Y TGQ I +DGG ++   
Sbjct: 233 SGLLPYSTGQPINIDGGLSMRRL 255

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 76/274 (27%), Positives = 117/274 (42%), Gaps = 54/274 (19%)

Query: 14  SLQGMTALVTGGT--------KGLG-----------NEAELNECLREWKTKCFKVTGSVC 54
           SL+G  A++TGG         K L            N+ +    + E K    +      
Sbjct: 7   SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNY----TTKPTVEYMAEDLSF--LMSTN 108
           D   +   E+  +Q+   F G  +ILIN  G N+    T     E +    +F  L    
Sbjct: 67  DVLDKESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125

Query: 109 FESAYHLSQL---------AHPLLKASGAGNIILVSSVCGVLSTNLGTI--YAATKGAMN 157
           FE  + L+ L         A  ++   G GNII +SS+     T L  +  Y+A K A++
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKG-GNIINISSMNAF--TPLTKVPAYSAAKAAIS 182

Query: 158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE---------KFLEEVKCRTPMER 208
              + LA  +A+  IR+N++AP F  T      L +E         K L      TPM R
Sbjct: 183 NFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH----TPMGR 238

Query: 209 PGEPKEVSSLVAFLCMP-AASYITGQTICVDGGF 241
            G+P+E+   + +L    A+S++TG  + VDGGF
Sbjct: 239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272

Length = 278

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 94.5 bits (235), Expect = 3e-23
 Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 34/253 (13%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTG T G+G                    E  L   ++E +    +  G  CD  S 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-LMSTNFESAYHLSQ- 117
            E E L+    + + G +++L+NN G   +       +A++L   ++ TN    + +++ 
Sbjct: 65  PEIEALVAAAVARY-GPIDVLVNNAGR--SGGGATAELADELWLDVVETNLTGVFRVTKE 121

Query: 118 -LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
            L    +   G G II ++S  G         Y+A+K  +    K L  E AR  I +N+
Sbjct: 122 VLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 181

Query: 177 VAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           V P F+ TP+     E Y     +S E+  + +  R P+ R   P+EV+ +VA+L    A
Sbjct: 182 VCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGA 241

Query: 228 SYITGQTICVDGG 240
           + +T Q + V GG
Sbjct: 242 AAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 94.0 bits (234), Expect = 4e-23
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 8/172 (4%)

Query: 75  GKLNILINNVGTNYTTKP-TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIIL 133
           G L++L+NN G         +E   ++   +M+ N ES +   + A P L+AS   +I+ 
Sbjct: 78  GGLSVLVNNAGVGSFGAIEQIEL--DEWRRVMAINVESIFLGCKHALPYLRASQPASIVN 135

Query: 134 VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD--NIRINSVAPWFITTPLTEPY- 190
           +SSV    +    T Y A+K A+  L K++A + AR   ++R NS+ P FI T + +P  
Sbjct: 136 ISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIF 195

Query: 191 --LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
             L +E+   ++    P+ R GEP +V+  V +L    + ++TG  + +DGG
Sbjct: 196 QRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247

Length = 251

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 92.2 bits (229), Expect = 2e-22
 Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 35/260 (13%)

Query: 10  QDRWSLQGMTALVTGGTKGLGNE-----------------------AELNECLREWKTKC 46
              + L G  A VTG   G+G                         AE  E +     + 
Sbjct: 1   PQLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRA 60

Query: 47  FKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS 106
            ++   V   +         +  + L  G L + +N  G      P  E   E    +M 
Sbjct: 61  IQIAADVTSKADLRAAVARTE--AEL--GALTLAVNAAGIA-NANPAEEMEEEQWQTVMD 115

Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI---YAATKGAMNQLAKNL 163
            N    +   Q     +  +G G+I+ ++S+ G++  N G +   Y A+K  +  L+K+L
Sbjct: 116 INLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIV-NRGLLQAHYNASKAGVIHLSKSL 174

Query: 164 ACEWARDNIRINSVAPWFITTPL-TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
           A EW    IR+NS++P +  TP+ T P +  +   +  + +TPM+R  +  E+     FL
Sbjct: 175 AMEWVGRGIRVNSISPGYTATPMNTRPEMVHQ--TKLFEEQTPMQRMAKVDEMVGPAVFL 232

Query: 223 CMPAASYITGQTICVDGGFT 242
              AAS+ TG  + VDGGF 
Sbjct: 233 LSDAASFCTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 90.7 bits (225), Expect = 6e-22
 Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 26/250 (10%)

Query: 13  WSLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCD 55
           + L G  A++TG   GLG                   AE  E   + +    K      D
Sbjct: 4   FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITAD 63

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
              + + + ++ Q   +  G ++ILINN G     +  +E+  +D   +++ N ++ + L
Sbjct: 64  LIQQKDIDSIVSQAVEVM-GHIDILINNAGI-IRRQDLLEFGNKDWDDVININQKTVFFL 121

Query: 116 SQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGT---IYAATKGAMNQLAKNLACEWARDN 171
           SQ +A   +K    G II ++S+   LS   G     Y A+K A+  L + LA E ++ N
Sbjct: 122 SQAVAKQFVKQGNGGKIINIASM---LSFQGGIRVPSYTASKSAVMGLTRALATELSQYN 178

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N++AP ++ T  T    +D    E +  R P  R G P +++    FL   A+ Y+T
Sbjct: 179 INVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVT 238

Query: 232 GQTICVDGGF 241
           G T+ VDGG+
Sbjct: 239 GYTLAVDGGW 248

Length = 251

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 89.6 bits (222), Expect = 1e-21
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 6/144 (4%)

Query: 99  EDLSFLMSTNFESAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAM 156
           ED   ++ TN +  Y++      P+++A   G II ++SV GV+  N G + Y+A K  +
Sbjct: 98  EDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG-NRGQVNYSAAKAGL 156

Query: 157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS 216
               K LA E A+  I +N +AP  I T +       E  L+E     PM R G+P EV+
Sbjct: 157 IGATKALAVELAKRKITVNCIAPGLIDTEMLA---EVEHDLDEALKTVPMNRMGQPAEVA 213

Query: 217 SLVAFLCMPAASYITGQTICVDGG 240
           SL  FL    ASY+T Q I V+GG
Sbjct: 214 SLAGFLMSDGASYVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 51/265 (19%)

Query: 15  LQGMTALVTGGTKG--LG-----------------NEAELNECLREWKTKCFKVTGSVCD 55
             G   +V GGT G  LG                 ++ +++  + + +    +  G   D
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN-FES--- 111
               A  E    Q++  F G +++L++    N+   P            MS N F++   
Sbjct: 67  VRDYAAVEAAFAQIADEF-GPIDVLVSGAAGNFPA-PAAG---------MSANGFKTVVD 115

Query: 112 -----AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
                 +++ + A+PLL+  GA +II +S+    +   +     A K  ++ L + LA E
Sbjct: 116 IDLLGTFNVLKAAYPLLRRPGA-SIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALE 174

Query: 167 WARDNIRINSVAPWFITTPLTE------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           W  + IR+NS+ P  I    TE      P     +    V    P++R G  +++++   
Sbjct: 175 WGPEGIRVNSIVPGPIAG--TEGMARLAP---SPELQAAVAQSVPLKRNGTKQDIANAAL 229

Query: 221 FLCMPAASYITGQTICVDGGFTVNG 245
           FL    ASYITG  + VDGG+++ G
Sbjct: 230 FLASDMASYITGVVLPVDGGWSLGG 254

Length = 264

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 90.7 bits (225), Expect = 2e-21
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 32/251 (12%)

Query: 15  LQGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSV 53
           LQG  AL+TG   G+G                      E +  E ++  + +  K     
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D    A   +L+++      G L+IL+N  G     K   +   E       TN  + +
Sbjct: 113 GDLKDEAFCRQLVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            L + A P L   GA +II   S+     +     YA+TK A+    K LA + A   IR
Sbjct: 172 WLCKAAIPHLPP-GA-SIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIR 229

Query: 174 INSVAPWFITTPLT----EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           +N+VAP  + TPL     +P    EK + +    TPM+RPG+P E++ L   L    +SY
Sbjct: 230 VNAVAPGPVWTPLQPSGGQP---PEK-IPDFGSETPMKRPGQPVEMAPLYVLLASQESSY 285

Query: 230 ITGQTICVDGG 240
           +TG+   V GG
Sbjct: 286 VTGEVFGVTGG 296

Length = 300

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 89.2 bits (221), Expect = 2e-21
 Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 35/250 (14%)

Query: 17  GMTALVTGGTKGLGNE----------------------AELNECLREWKTKCFKVTGSVC 54
           G  A+VTGG  G+G +                      A+  E         F V G V 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGP---NLFFVHGDVA 57

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +        M +      G++++L+NN     +       + E+   ++S N    Y 
Sbjct: 58  DETLVKFVVYAMLEKL----GRIDVLVNNAARG-SKGILSSLLLEEWDRILSVNLTGPYE 112

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     L  +  G II ++S     S      YAA+KG +  L   LA     D IR+
Sbjct: 113 LSRYCRDELIKNK-GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRV 170

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKC-RTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           N ++P +I T  TE        L +    + P  R G PK++++LV FLC   A +ITG+
Sbjct: 171 NCISPGWINT--TEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAGFITGE 228

Query: 234 TICVDGGFTV 243
           T  VDGG T 
Sbjct: 229 TFIVDGGMTK 238

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.9 bits (221), Expect = 4e-21
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 37/257 (14%)

Query: 18  MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
             ALVTGG +G+G                    ++ EL    +E +    +V     D +
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFESAYHL 115
             +  E ++    + + G+++ L+NN G     +  +  +  + SF  +++ N    + L
Sbjct: 63  DLSAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPE-SFDRVLAINLRGPFFL 120

Query: 116 SQ------LAHPLLKASGAGNIILVSSV-CGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           +Q      LA P  +     +I+ VSSV   ++S N G  Y  +K  ++  A+  A   A
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE-YCISKAGLSMAAQLFAARLA 179

Query: 169 RDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
            + I +  V P  I T +T P  +  D    + +    PM R GEP++V+  VA L    
Sbjct: 180 EEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGL---VPMPRWGEPEDVARAVAALASGD 236

Query: 227 ASYITGQTICVDGGFTV 243
             Y TGQ I VDGG ++
Sbjct: 237 LPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 88.2 bits (219), Expect = 6e-21
 Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 42/257 (16%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL--------- 65
           L G  A++TGG  G+G    L    R        V G +   + +A  +++         
Sbjct: 5   LAGRVAVITGGGSGIG----LATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDV 60

Query: 66  --MKQVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMS----------T 107
                V++LF+      G ++I  NN G +    P      ED S L +           
Sbjct: 61  TDEDAVNALFDTAAETYGSVDIAFNNAGIS----P-----PEDDSILNTGLDAWQRVQDV 111

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACE 166
           N  S Y   + A P +   G G+II  +S   V+ +    I Y A+KG +  +++ L  +
Sbjct: 112 NLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQ 171

Query: 167 WARDNIRINSVAPWFITTPL-TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           +AR  IR+N++ P  + TPL  E +  D +         PM R  EP+E+++ VAFL   
Sbjct: 172 FARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASD 231

Query: 226 AASYITGQTICVDGGFT 242
            AS+IT  T  VDGG +
Sbjct: 232 DASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 88.1 bits (219), Expect = 6e-21
 Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 31/253 (12%)

Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
            LVTG  +G+G                   N  +L E + + +   +       D +  A
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
             +++++++     G +++L+N  G             ED     + N    +++SQ   
Sbjct: 61  AVDEVVQRLERE-YGPIDVLVNVAGI-LRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 121 PLLKASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
           P +K   +G I+ V S    V    +   YAA+K A+  L K L  E A   IR N V+P
Sbjct: 119 PRMKRRRSGAIVTVGSNAANVPRMGMAA-YAASKAALTMLTKCLGLELAPYGIRCNVVSP 177

Query: 180 WFITTPLTEPYLSDEK--------FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
               T +     +DE           E+ +   P+ +  EP ++++ V FL    AS+IT
Sbjct: 178 GSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHIT 237

Query: 232 GQTICVDGGFTVN 244
              + VDGG T+ 
Sbjct: 238 MHDLVVDGGATLG 250

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 88.2 bits (219), Expect = 6e-21
 Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 35/254 (13%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           G  ALVTGG  G+G                   +     +     +     + G  CD +
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRAL-GVQCDVT 59

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
           S A+ +   +Q    F G L+I+++N G   T+ P  E   ED +  M  N    + +S+
Sbjct: 60  SEAQVQSAFEQAVLEFGG-LDIVVSNAGI-ATSSPIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 118 LAHPLLKASG-AGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            A  ++K+ G  GNI+  +S   V    N    Y+A K A   LA+ LA E   D IR+N
Sbjct: 118 EAFRIMKSQGIGGNIVFNASKNAVAPGPNAAA-YSAAKAAEAHLARCLALEGGEDGIRVN 176

Query: 176 SVAP--------WFITTPLTEPYLSDEKFLEE-VKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P         +               LEE  + R  ++R   P++V+  V  +    
Sbjct: 177 TVNPDAVFRGSKIW-EGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASED 235

Query: 227 ASYITGQTICVDGG 240
               TG  + VDGG
Sbjct: 236 FGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 87.7 bits (217), Expect = 9e-21
 Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 23/251 (9%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------KVTGSVCDASSRAE----- 61
           L+  TA+VTGG  G+G            K   F        KV   +      A+     
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 62  ---REKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
              R+ +   V++     G +++L+NN G +    P  +        L++ N   A H+ 
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMH 119

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
               P +   GAG I+ ++S    + ++   +YAA KG +   +K +A E AR  I +N 
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNV 179

Query: 177 VAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           V P    T L +         EK  E      P+ R G+P ++   + F     AS+ITG
Sbjct: 180 VCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG 239

Query: 233 QTICVDGGFTV 243
           Q + V GG T+
Sbjct: 240 QVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 86.6 bits (215), Expect = 1e-20
 Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 23/219 (10%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL------------- 65
            ALVTG ++G+G E         ++            A S +  +               
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDAR 61

Query: 66  -MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
            +        G++++L++N G         E    +L    S N  +   L++   P L+
Sbjct: 62  ALVDALRDRFGRIDVLVHNAGIG-RPTTLREGSDAELEAHFSINVIAPAELTRALLPALR 120

Query: 125 ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
            +G+G ++ ++S+ G         Y+A+K A+  LA  L  E     +R+++V P F+ T
Sbjct: 121 EAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPGFVDT 180

Query: 185 PLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           P+ +       F        P E   +PK++++LV  + 
Sbjct: 181 PMAQGLTLVGAF--------PPEEMIQPKDIANLVRMVI 211

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 86.8 bits (215), Expect = 2e-20
 Identities = 56/248 (22%), Positives = 91/248 (36%), Gaps = 32/248 (12%)

Query: 20  ALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK----------QV 69
            +VTG  +G+G         R        V           E    ++           V
Sbjct: 1   VIVTGAAQGIGRA-----VARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAAAV 55

Query: 70  SSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLL 123
             + +      G ++ L+N  G       T     ED     + N    ++L Q   P +
Sbjct: 56  REVCSRLLAEHGPIDALVNCAGV-LRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHM 114

Query: 124 KASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI 182
           K    G I+ V+S    V   ++   Y A+K A+  L+K L  E A   +R N V+P   
Sbjct: 115 KDRRTGAIVTVASNAAHVPRISMAA-YGASKAALASLSKCLGLELAPYGVRCNVVSPGST 173

Query: 183 TTPLTEPYLSDEK--------FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
            T +      DE           E+ +   P+ +  +P ++++ V FL    A +IT   
Sbjct: 174 DTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITMHD 233

Query: 235 ICVDGGFT 242
           + VDGG T
Sbjct: 234 LVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 50/234 (21%), Positives = 93/234 (39%), Gaps = 38/234 (16%)

Query: 19  TALVTGGTKGLGNE-------------------AELNECLREWKTKCFKVTGSVCDASSR 59
             L+TG + G+G                      +L             +     D +  
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLE---LDVTDE 58

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
              +  +K+V   F G++++L+NN G      P  E   E++  L   N      +++  
Sbjct: 59  ESIKAAVKEVIERF-GRIDVLVNNAGYGLF-GPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            PL++  G+G I+ VSSV G++ T     Y A+K A+  L+++L  E A   I++  + P
Sbjct: 117 LPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176

Query: 180 WFITTPLT-------------EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
             + T                 PY  + K ++E         PG+P++V+ ++ 
Sbjct: 177 GPVRTGFADNAAGSALEDPEISPYAPERKEIKENAAGVGSN-PGDPEKVADVIV 229

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 86.0 bits (213), Expect = 4e-20
 Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 39/260 (15%)

Query: 16  QGMTALVTGGTKGLGN--------------------------EAELNECLREWKTKCFKV 49
                +VTGG++G+G                           E+ELN   R     C  V
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELN---RAGPGSCKFV 64

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               CD +   + + L+      F G+++ L+NN G +   + T E  A++   L++ N 
Sbjct: 65  P---CDVTKEEDIKTLISVTVERF-GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNL 120

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S +  S+ A P L+ S  GNII +SS+ G +       Y ATKGA+  + K LA + +R
Sbjct: 121 ISYFLASKYALPHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESR 179

Query: 170 DNIRINSVAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
             +R+N ++P  I TPL E   +        ++E +    + R G   E      FL   
Sbjct: 180 YGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA-A 238

Query: 226 AASYITGQTICVDGGFTVNG 245
            A++ TG  + + GG  +  
Sbjct: 239 EATFCTGIDLLLSGGAELGY 258

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 5e-20
 Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 50/264 (18%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK------- 67
           L+G  ALVTG + GLG  A   + L +   K       V  AS R ER K ++       
Sbjct: 7   LEGKVALVTGASSGLG--ARFAQVLAQAGAK-------VVLASRRVERLKELRAEIEAEG 57

Query: 68  ---QVSSL-----------------FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
               V SL                   G ++IL+NN G + TT+  V+    D  F+  T
Sbjct: 58  GAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDT 116

Query: 108 NFESAYHLSQ-LAHPLL-KASGAGN------IILVSSVCG--VLSTNLGTIYAATKGAMN 157
           N   A+ ++Q +A  ++ +A GAGN      II ++SV G  VL   +G +Y  +K A+ 
Sbjct: 117 NTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP-QIG-LYCMSKAAVV 174

Query: 158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSS 217
            + + +A EW R  I +N++ P +I T +   +   E+  + V    P +R G+P+++  
Sbjct: 175 HMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSM-LPRKRVGKPEDLDG 233

Query: 218 LVAFLCMPAASYITGQTICVDGGF 241
           L+  L    + +I G  I  D GF
Sbjct: 234 LLLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 85.6 bits (212), Expect = 5e-20
 Identities = 51/256 (19%), Positives = 89/256 (34%), Gaps = 44/256 (17%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
             LVTG ++GLG                    +         E   +   +   V D   
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRDQ 61

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS---FLMSTNF--ESAY 113
                  M + +    G ++ ++NN   ++   P      + +    +        + A 
Sbjct: 62  VQA----MIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNL---GTI----YAATKGAMNQLAKNLACE 166
           +L Q   P  K  G+G +I +        TNL     +    Y   K A+    +N+A E
Sbjct: 118 NLLQAVLPDFKERGSGRVINIG-------TNLFQNPVVPYHDYTTAKAALLGFTRNMAKE 170

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
                I +N V+   +           E F + +   TP+ +   P++++  V F   P 
Sbjct: 171 LGPYGITVNMVSGGLLKVTDASAATPKEVF-DAIAQTTPLGKVTTPQDIADAVLFFASPW 229

Query: 227 ASYITGQTICVDGGFT 242
           A  +TGQ + VDGG  
Sbjct: 230 ARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 85.0 bits (211), Expect = 7e-20
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 6/193 (3%)

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILIN---NVGTNYTTKPTVEYMAEDLSFLMSTNF 109
             D +S  + ++L ++V     GK++ L++           KP ++   E     +  + 
Sbjct: 50  PLDVTSDEDIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISA 108

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S   L++ A PL+   G+  I+ +S +               K A+  LA+ LA E  R
Sbjct: 109 YSFISLAKAAKPLMNEGGS--IVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGR 166

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR+N+++     T         +K +E  +   P+ R    +EV++  AFL    A  
Sbjct: 167 KGIRVNTISAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSDLARG 226

Query: 230 ITGQTICVDGGFT 242
           ITGQ + VDGGF+
Sbjct: 227 ITGQILYVDGGFS 239

Length = 239

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 85.2 bits (211), Expect = 7e-20
 Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 25/247 (10%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L    A+VTG ++G+G                    + A  +E + E +    +      
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  A   +L     + F G++++L+NN G         ++  ED    ++TN   A+ 
Sbjct: 63  DVADAAAVTRLFDAAETAF-GRIDVLVNNAGV-MPLGTIADFDLEDFDRTIATNLRGAFV 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           + + A   L     G II +S+    L       YAA+K A+  L   LA E     I +
Sbjct: 121 VLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITV 178

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP  + T L     S E  ++++    P+ER G P+E+++ VAFL  P  +++ GQ 
Sbjct: 179 NAVAPGPVATELFFNGKSAE-QIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQV 237

Query: 235 ICVDGGF 241
           + V+GGF
Sbjct: 238 LRVNGGF 244

Length = 245

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 84.8 bits (210), Expect = 1e-19
 Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 37/250 (14%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           TALVTG   G+G                   + A L            +     CD +  
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA--RFVPVACDLTDA 61

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTN-----YTTKPTVEYMAEDLSFLMSTNFESAYH 114
           A     +   ++   G +++L+ N G       + T P        L      N E+AY 
Sbjct: 62  ASLAAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNAL------NLEAAYL 114

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
             +     +     G ++ + SV G+    LG   Y+A K  +    K LA E+ R  IR
Sbjct: 115 CVEAVLEGMLKRSRGAVVNIGSVNGM--AALGHPAYSAAKAGLIHYTKLLAVEYGRFGIR 172

Query: 174 INSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            N+VAP  + T   E  ++ + +  EE+K   P++    P +V++ V FL  PAA  ITG
Sbjct: 173 ANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITG 232

Query: 233 QTICVDGGFT 242
             + VDGG T
Sbjct: 233 VCLPVDGGLT 242

Length = 257

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 84.5 bits (209), Expect = 1e-19
 Identities = 74/254 (29%), Positives = 108/254 (42%), Gaps = 42/254 (16%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
            ALVTGG++G+G                    N     E +        K      D S 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL--- 115
             +   +   +    +  L  L+NN G  +T        AE ++ ++STN  + Y L   
Sbjct: 63  ENQVVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV-TGYFLCCR 120

Query: 116 ---SQLAHPLLKASGAGNIIL-VSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARD 170
               ++A    K  G+G  I+ VSS    L      + YAA+KGA++ L   L+ E A  
Sbjct: 121 EAVKRMAL---KHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQ 177

Query: 171 NIRINSVAPWFITTPL----TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
            IR+N V P FI T +     EP   D      VK   PM+R G+P+EV+  + +L    
Sbjct: 178 GIRVNCVRPGFIYTEMHASGGEPGRVD-----RVKSNIPMQRGGQPEEVAQAIVWLLSDK 232

Query: 227 ASYITGQTICVDGG 240
           ASY+TG  I + GG
Sbjct: 233 ASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 46/261 (17%)

Query: 16  QGMTALVTGGTKGLGNE-----------------AEL-NECLREWKTKCFKVTGSVCDAS 57
            G   +VTG  +G+G                   +EL +E   E +    +      D  
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLE 66

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-----LMSTNFESA 112
           + A  +  M      F G++++LINNVG     KP  EY  E +       L  T +   
Sbjct: 67  TYAGAQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLW--- 122

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVC--GVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
               +   P + A G G I+ VSS+   G+        Y+A KG +N L  +LA E+A  
Sbjct: 123 --CCRAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAEH 176

Query: 171 NIRINSVAPWFITTPL------TEPYLSDEK-----FLEEVKCRTPMERPGEPKEVSSLV 219
            IR+N+VAP     P         P    EK      +++    + M+R G   E  + +
Sbjct: 177 GIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAI 236

Query: 220 AFLCMPAASYITGQTICVDGG 240
            FL    ASYITG  + V GG
Sbjct: 237 LFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 34/257 (13%)

Query: 13  WSLQGMTALVTGGTKGLGNE-----AELNECL----REWKT------KCFKVTGSVCDAS 57
               G T  VTG  +G+G        E    +    + + T        F +   V DA+
Sbjct: 4   MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVL--DVSDAA 61

Query: 58  SRAER-EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           + A+  ++L+ +      G L++L+N  G       T     ED     + N   A++L 
Sbjct: 62  AVAQVCQRLLAE-----TGPLDVLVNAAGI-LRMGATDSLSDEDWQQTFAVNAGGAFNLF 115

Query: 117 QLAHPLLKASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +   P  +   +G I+ V S    V    +   Y A+K A+  LAK +  E A   +R N
Sbjct: 116 RAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA-YGASKAALTSLAKCVGLELAPYGVRCN 174

Query: 176 SVAPWFITTPLTEPYLSDEK--------FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
            V+P    T +      DE         F E+ K   P+ +   P+E+++ V FL    A
Sbjct: 175 VVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLA 234

Query: 228 SYITGQTICVDGGFTVN 244
           S+IT Q I VDGG T+ 
Sbjct: 235 SHITLQDIVVDGGATLG 251

Length = 252

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 82.7 bits (205), Expect = 4e-19
 Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 33/193 (17%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
            ALVTG  +G+G                    +       + + + +   V     D + 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNY----TTKPTVEYMAEDLSFLMSTNFESAYH 114
            A  E     V   + G L+IL+NN G  +     + PT E   E     M TNF     
Sbjct: 62  DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTREQARET----MKTNFFGTVD 116

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           ++Q   PLLK S AG I+ VSS  G L++     Y  +K A+N L + LA E     I++
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKETGIKV 172

Query: 175 NSVAPWFITTPLT 187
           N+  P ++ T + 
Sbjct: 173 NACCPGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 81.1 bits (201), Expect = 5e-19
 Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 28/172 (16%)

Query: 19  TALVTGGTKGLG----------------------NEAELNECLREWKTKCFKVTGSVCDA 56
           T L+TGGT GLG                            E + E +    +VT + CD 
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           + R     L+  + +   G L+ +++N G      P  E   E    +++     A++L 
Sbjct: 62  ADRDALAALLAALPAAL-GPLDGVVHNAGVL-DDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           +L   L      G  +L SSV GVL +     YAA   A++ LA++   E  
Sbjct: 120 ELTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 82.8 bits (204), Expect = 6e-19
 Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 30/254 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           +L G  ALVTG ++G+G                    N+   +E +RE ++   K     
Sbjct: 3   NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIE 62

Query: 54  CDASSRAEREKLMKQVSS-----LFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMST 107
            D +S    +KL++Q+ +     +   +++IL+NN G    T+ T+E   E++   +M+ 
Sbjct: 63  ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG--TQGTIENTTEEIFDEIMAV 120

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           N ++ + L Q   PLL+A G   +I +SS    L       Y  +KGA+N +   LA   
Sbjct: 121 NIKAPFFLIQQTLPLLRAEG--RVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHL 178

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
               I +N++ P +  T +    L D +        +   R G+ ++++  VAFL    +
Sbjct: 179 GERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDS 238

Query: 228 SYITGQTICVDGGF 241
            ++TGQ I V GGF
Sbjct: 239 RWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 83.1 bits (206), Expect = 6e-19
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 28/197 (14%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVC 54
           ++G TAL+TG + G+G                    E +L    +E + K   +V     
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP---TVEYMAEDLSFLMSTNFES 111
           D S     E+L  ++     G +++L+NN G          +++   E    ++  N  +
Sbjct: 64  DLSDPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEE----MIQLNILA 118

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              L++   P +   GAG+II + S  G++ T    +Y+ATK  +   ++ L  E     
Sbjct: 119 LTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTG 178

Query: 172 IRINSVAPWFITTPLTE 188
           +++ +V P    T   +
Sbjct: 179 VKVTAVCPGPTRTEFFD 195

Length = 265

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 82.5 bits (204), Expect = 8e-19
 Identities = 72/254 (28%), Positives = 106/254 (41%), Gaps = 31/254 (12%)

Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG  +G+G                   NE        +      K      D S R 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           +    ++QV   F G LN+++NN G   TT P      E    + + N        Q A 
Sbjct: 65  QVFAAVRQVVDTF-GDLNVVVNNAGVAPTT-PIETITEEQFDKVYNINVGGVIWGIQAAQ 122

Query: 121 PLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
              K  G  G II  +S  GV+      +Y++TK A+  L +  A + A + I +N+ AP
Sbjct: 123 EAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAP 182

Query: 180 WFITTPL---------TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
             + TP+               DE  +E+      + R  EP++V++ V+FL  P + YI
Sbjct: 183 GIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYI 242

Query: 231 TGQTICVDGGFTVN 244
           TGQTI VDGG   +
Sbjct: 243 TGQTIIVDGGMVFH 256

Length = 256

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 81.6 bits (202), Expect = 9e-19
 Identities = 47/197 (23%), Positives = 69/197 (35%), Gaps = 29/197 (14%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G T L+TGGT G+G                    E  L E  +E       +   V 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN----IHTIVL 57

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFES 111
           D       E L + + S +   L+ILINN G         P  +   +     + TN   
Sbjct: 58  DVGDAESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDPASD--LDKADTEIDTNLIG 114

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              L +   P LK      I+ VSS    +      +Y ATK A++     L  +     
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 172 IRINSVAPWFITTPLTE 188
           + +  + P  + T L E
Sbjct: 175 VEVVEIVPPAVDTELHE 191

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 82.3 bits (203), Expect = 9e-19
 Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 38/257 (14%)

Query: 15  LQGMTALVTGGTKGLGN---EAELNECLR----------------EWKTKCFKVTGSVCD 55
           L G TAL+TG  +G+G    +A + E  R                E       ++  V D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
              +A  ++ +  +   + G ++IL+NN    +   P V+   E    L + N      +
Sbjct: 61  ---QASIDRCVAALVDRW-GSIDILVNNAAL-FDLAPIVDITRESYDRLFAINVSGTLFM 115

Query: 116 SQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            Q     + A G  G II ++S  G     L  +Y ATK A+  L ++      R  I +
Sbjct: 116 MQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 175

Query: 175 NSVAPWFITTPLTEPYLSDEKFLE-----------EVKCRTPMERPGEPKEVSSLVAFLC 223
           N++AP  +     +    D KF              V    P  R G  ++++ +  FL 
Sbjct: 176 NAIAPGVVDGEHWDGV--DAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLA 233

Query: 224 MPAASYITGQTICVDGG 240
              A YI  QT  VDGG
Sbjct: 234 STDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +   +   L+      F G+++ L+NN     + KP  +        ++  N      
Sbjct: 62  DITDEDQCANLVALALERF-GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLR 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L+Q   P L  SG G+I++++S+    S      Y   KGA+   +++LA E     IR+
Sbjct: 121 LTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRV 179

Query: 175 NSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           NSVAP +I     + Y          + E+   E    + ++R     EV+S V FL   
Sbjct: 180 NSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASD 239

Query: 226 AASYITGQTICVDGG 240
            A  ITGQT+ V+ G
Sbjct: 240 LARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 54/264 (20%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+    ++TGG +GLG                   N+ +L E + E      +V G   +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGT------------NYTTKPTVE----YMAE 99
            +   + E    Q++  F G+LN LINN G               T+K ++E     +  
Sbjct: 63  VTDEEDVEATFAQIAEDF-GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 100 DL--SFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAM 156
           +L   FL     E+A  + +           G II +SS+    + N+G T Y+A+K  +
Sbjct: 122 NLTGVFL--CGREAAAKMIESGS-------KGVIINISSIA--RAGNMGQTNYSASKAGV 170

Query: 157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS 216
             +    A E AR  IR+ ++AP  I T +T   +  E  LE ++   P+ R GEP+E++
Sbjct: 171 AAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEA-LERLEKMIPVGRLGEPEEIA 228

Query: 217 SLVAFLCMPAASYITGQTICVDGG 240
             V F+      Y+TG+ + +DGG
Sbjct: 229 HTVRFII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 81.6 bits (202), Expect = 2e-18
 Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 34/255 (13%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKT---------KCFKVTGSV--------CDAS 57
           LQG  AL+TG   G+G EA     L E            +       +         D +
Sbjct: 4   LQGKVALLTGAASGIG-EAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVT 62

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
            +   ++++      F G ++IL NN    +   P ++   +    L + N +  + L Q
Sbjct: 63  RQDSIDRIVAAAVERF-GGIDILFNNAAL-FDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120

Query: 118 -LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
            +A  +++    G II ++S  G     L + Y ATK A+    ++ A    R  I +N+
Sbjct: 121 AVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNA 180

Query: 177 VAPWFITTPLTEPYLSDEKF-------LEEVKCRT----PMERPGEPKEVSSLVAFLCMP 225
           +AP  + TP+ +    D  F         E K       P+ R G P +++ +  FL   
Sbjct: 181 IAPGVVDTPMWD--QVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA 238

Query: 226 AASYITGQTICVDGG 240
            A YI  QT  VDGG
Sbjct: 239 DADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 81.0 bits (200), Expect = 4e-18
 Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 28/251 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV- 53
           S Q  T LVTGG  G+G                   N  +L     E +    K  G+V 
Sbjct: 4   SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEAL--KGAGAVR 61

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
               D +   +  + +   ++ ++G+L+ +++  G + T  P  +  ++     +  N  
Sbjct: 62  YEPADVTDEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120

Query: 111 -SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            + Y L   A  L++  G G+ + +SS+    +      Y  TK A++ L K  A E   
Sbjct: 121 GTMYVLKHAARELVRG-GGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGP 179

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             +R+NS+ P  I T L  P     +   + +  TP+ R GE ++V++L  FL   AAS+
Sbjct: 180 SWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASW 239

Query: 230 ITGQTICVDGG 240
           ITGQ I VDGG
Sbjct: 240 ITGQVINVDGG 250

Length = 276

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 80.6 bits (199), Expect = 5e-18
 Identities = 65/254 (25%), Positives = 101/254 (39%), Gaps = 36/254 (14%)

Query: 15  LQGMTALVTGGTKGLGN--EAELNE-----------CLREWKT----------KCFKVTG 51
           L G  ALVTG ++G+G     +L E            L +             KC  V  
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPV-- 58

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNV------GTNYTTKPTVEYMAEDLSFLM 105
             CD S   E E L ++V+    G+L+IL+NN             KP  E        + 
Sbjct: 59  -RCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDIN 117

Query: 106 STNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLAC 165
           +    + Y  S  A PL+  +G G I+++SS  G L       Y   K A++++A ++A 
Sbjct: 118 NVGLRAHYACSVYAAPLMVKAGKGLIVIISST-GGLEYLFNVAYGVGKAAIDRMAADMAH 176

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS--SLVAFLC 223
           E     + + S+ P F+ T L      D++     K R      GE  E S   +VA   
Sbjct: 177 ELKPHGVAVVSLWPGFVRTELVLEMPEDDEGSWHAKERDAF-LNGETTEYSGRCVVALAA 235

Query: 224 MPAASYITGQTICV 237
            P    ++G+ +  
Sbjct: 236 DPDLMELSGRVLIT 249

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 79.5 bits (196), Expect = 8e-18
 Identities = 69/246 (28%), Positives = 104/246 (42%), Gaps = 26/246 (10%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKT----------------KCFKVTGSVC----DASS 58
             L+TG ++G+G    +    R W                        G  C    D ++
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
            A+   +   V S F G+L+ L+NN G    + P  +  A  L  +  TN   AY  ++ 
Sbjct: 64  EADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE 122

Query: 119 AHPLLKAS---GAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           A   L        G I+ VSS+   L S N    YA +KGA++ L   LA E     +R+
Sbjct: 123 AARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRV 182

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  I T +        +    +  +TP+ R GE  EV+  + +L   AASY+TG  
Sbjct: 183 NAVRPGLIETEIHASGGQPGR-AARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL 241

Query: 235 ICVDGG 240
           + V GG
Sbjct: 242 LDVGGG 247

Length = 248

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 79.2 bits (196), Expect = 9e-18
 Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 27/193 (13%)

Query: 17  GMTALVTGGTKGLGNE---------------AELNECLREWKTKCF--------KVTGSV 53
           G   L+TGG+ G+G                 A     L E   +          KV+   
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S   E E+   Q      G  ++++N  G +       +  AE+    M  N+  + 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIP-GLFEDLTAEEFERGMDVNYFGSL 118

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
           +++    PL+K    G+I+ VSS   ++    G + Y  +K A+  LA++L  E    NI
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGI-YGYSAYCPSKFALRGLAESLRQELKPYNI 177

Query: 173 RINSVAPWFITTP 185
           R++ V P    TP
Sbjct: 178 RVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 79.1 bits (195), Expect = 1e-17
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 16/195 (8%)

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAY 113
           D +  A+  +L + V     G+L+ L+NN G     +  +E M A  L+ + +TN   ++
Sbjct: 60  DVADEADVLRLFEAVDREL-GRLDALVNNAGI-LEAQMRLEQMDAARLTRIFATNVVGSF 117

Query: 114 HLSQLAHPLL--KASGAGNIIL-VSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWAR 169
             ++ A   +  +  G G  I+ VSS+   L S      YAA+KGA++ +   LA E A 
Sbjct: 118 LCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAA 177

Query: 170 DNIRINSVAPWFITTPL----TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           + IR+N+V P  I T +     EP       ++ VK   PM R G  +EV+  + +L   
Sbjct: 178 EGIRVNAVRPGVIYTEIHASGGEP-----GRVDRVKAGIPMGRGGTAEEVARAILWLLSD 232

Query: 226 AASYITGQTICVDGG 240
            ASY TG  I V GG
Sbjct: 233 EASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 40/262 (15%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G  AL+TGG  GLG                   +  ++ E   ++      V G   D
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEG---D 58

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAEDLS--F--LMSTNFE 110
             S A+ E+ + +    F GKL+  I N G  +Y+T   V+   E L   F  L   N +
Sbjct: 59  VRSLADNERAVARCVERF-GKLDCFIGNAGIWDYSTS-LVDIPEEKLDEAFDELFHINVK 116

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
                ++ A P L A+  G++I   S  G      G +Y A+K A+  L K LA E A  
Sbjct: 117 GYILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELA-P 174

Query: 171 NIRINSVAPWFITTPLTEP--------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
           +IR+N VAP  + T L  P         +S     + +K   P+    EP++ +    FL
Sbjct: 175 HIRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFL 234

Query: 223 CMPAAS-YITGQTICVDGGFTV 243
                +   TG  I  DGG  V
Sbjct: 235 ASRGDNRPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.4 bits (191), Expect = 4e-17
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 21/192 (10%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SLQG  AL+TG  +G+G                    E  L     E +    KV  +  
Sbjct: 4   SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S   E    ++Q+ +   G ++ILINN G +   K  +E    +   ++  N    Y+
Sbjct: 64  DVSDYEEVTAAIEQLKNEL-GSIDILINNAGISKFGK-FLELDPAEWEKIIQVNLMGVYY 121

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            ++   P +    +G+II +SS  G     + + Y+A+K  +  L ++L  E  + NIR+
Sbjct: 122 ATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRV 181

Query: 175 NSVAPWFITTPL 186
            ++ P  + T +
Sbjct: 182 TALTPSTVATDM 193

Length = 239

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 76.9 bits (190), Expect = 7e-17
 Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 35/196 (17%)

Query: 20  ALVTGGTKGLG-------------------NEAELNECLRE------WKTKCFKVTGSVC 54
           A+VTG T G+G                    + +L+   +E       +TK         
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTI-----AA 58

Query: 55  DASSRAER-EKLMKQVSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESA 112
           D S+  +  E++ K++  L  G   IL+NNVG +++  +  +E   ++L  +++ N  + 
Sbjct: 59  DFSAGDDIYERIEKELEGLDIG---ILVNNVGISHSIPEYFLETPEDELQDIINVNVMAT 115

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             +++L  P +     G I+ +SS  G++ T L   Y+A+K  ++  ++ L  E+    I
Sbjct: 116 LKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGI 175

Query: 173 RINSVAPWFITTPLTE 188
            + S+ P+ + T +++
Sbjct: 176 DVQSLLPYLVATKMSK 191

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 75.9 bits (187), Expect = 1e-16
 Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 23/241 (9%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------TGSVCDASSRAE 61
             G   LV GG++G+G  A +   + +     F               TG+    +  A+
Sbjct: 4   FTGKKVLVLGGSRGIG-AAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSAD 62

Query: 62  REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP 121
           R+ ++  V    +G L+IL+ N G        +E  A+D+  L   N  + YH S  A  
Sbjct: 63  RDAVIDVVRK--SGALDILVVNAGIAVFGDA-LELDADDIDRLFKINIHAPYHASVEA-- 117

Query: 122 LLKASGAGNIILVSSVCG-VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW 180
             +    G II++ SV G  +       YAA+K A+  +A+ LA ++    I IN V P 
Sbjct: 118 ARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPG 177

Query: 181 FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
            I T       ++    + +     ++R G P+EV+ +VA+L  P AS++TG    +DG 
Sbjct: 178 PIDTDANP---ANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234

Query: 241 F 241
           F
Sbjct: 235 F 235

Length = 237

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 36/254 (14%)

Query: 15  LQGMTALVTGGTKGLG----------NEAELNECLR-----EWKTKCFKVTGSVC----- 54
           L G  ALVTGGT+GLG            A L  C R     E +    +  G+       
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT-VEYMAEDLSFLMSTNFESAY 113
           D S   +  +++      F G+L+ L+N  G   T + T ++   E      + N  + +
Sbjct: 64  DLSDVEDCRRVVAAADEAF-GRLDALVNAAGL--TDRGTILDTSPELFDRHFAVNVRAPF 120

Query: 114 HLSQLAHPLLKASGAG----NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            L Q A  L++   A     NI  +S+  G     L   Y A+KGA+  L +N A    R
Sbjct: 121 FLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ--PFL-AAYCASKGALATLTRNAAYALLR 177

Query: 170 DNIRINSVAPWFITTP-----LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           + IR+N +   ++ T        E + + + +LE+     P  R  +P EV+  VAFL  
Sbjct: 178 NRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLS 237

Query: 225 PAASYITGQTICVD 238
             +  +TG  I  D
Sbjct: 238 DESGLMTGSVIDFD 251

Length = 260

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 21/186 (11%)

Query: 63  EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL--AH 120
            ++   VS    G  +ILINN     T     E  AE L    + N  +   LS      
Sbjct: 83  NRVFYAVSERL-GDPSILINN-AAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ 140

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLGTI-----YAATKGAMNQLAKNLACEWARDNIRIN 175
              KA G   II ++S       +LG +     YAATKGA+    K+LA E A   I +N
Sbjct: 141 YDGKAGG--RIINLTS-----GQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVN 193

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +V P     P    ++++E     +  + P  R GEP + + L+AFL    A +ITGQ I
Sbjct: 194 AVNP----GPTDTGWITEE-LKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVI 248

Query: 236 CVDGGF 241
             +GGF
Sbjct: 249 HSEGGF 254

Length = 256

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 75.1 bits (185), Expect = 3e-16
 Identities = 53/223 (23%), Positives = 81/223 (36%), Gaps = 37/223 (16%)

Query: 15  LQGMTALVTGGTKGLGN-------------------------------EAELNECLREWK 43
           L G  A VTG ++G+G                                   + E   E +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 44  TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLS 102
               +    V D     +   L++     F G+L+IL+NN G  + +   VE   A+   
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLS--LVEDTPAKRFD 117

Query: 103 FLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
            +   N    Y LSQ A P +  +G G+I+ +S    +        YAA K  M++L   
Sbjct: 118 LMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLG 177

Query: 163 LACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP 205
           LA E  R  I +NS+ P           LS        + R+P
Sbjct: 178 LAAELRRHGIAVNSLWPSTAIETPAATELSGGSD--PARARSP 218

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 74.6 bits (184), Expect = 5e-16
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 29/188 (15%)

Query: 14  SLQGMTALVTGGTKGLGNE----------------------AELNECLREWKTKCFKVTG 51
           +L+G  AL+TG + G+G                          L + +         +  
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALAL-- 60

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D + RA  E  ++ +   F G+++IL+NN G      P  E   +D   ++ TN + 
Sbjct: 61  ---DVTDRAAVEAAIEALPEEF-GRIDILVNNAGL-ALGDPLDEADLDDWDRMIDTNVKG 115

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
             + ++   P +    +G+II + S+ G      G +Y ATK A+   +  L  E A   
Sbjct: 116 LLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTG 175

Query: 172 IRINSVAP 179
           IR+  ++P
Sbjct: 176 IRVTVISP 183

Length = 246

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 74.3 bits (183), Expect = 5e-16
 Identities = 55/203 (27%), Positives = 82/203 (40%), Gaps = 33/203 (16%)

Query: 20  ALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF------ 73
            L+TG ++G+G   EL   L         V  +  D S+  E   L    S L       
Sbjct: 1   VLITGASRGIG--LELVRQLLA--RGNNTVIATCRDPSAATELAALGASHSRLHILELDV 56

Query: 74  ----------------NGKLNILINNVG--TNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
                           +  L++LINN G   +Y     V+   EDL  +   N      L
Sbjct: 57  TDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDS--EDLLEVFQVNVLGPLLL 114

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLS-TNLGTIYA--ATKGAMNQLAKNLACEWARDNI 172
           +Q   PLL       II +SS  G +     G  Y+  A+K A+N L K+LA E  RD I
Sbjct: 115 TQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGI 174

Query: 173 RINSVAPWFITTPLTEPYLSDEK 195
            + S+ P ++ T +  P+  ++ 
Sbjct: 175 TVVSLHPGWVRTDMGGPFAKNKG 197

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 73.9 bits (182), Expect = 8e-16
 Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 31/193 (16%)

Query: 20  ALVTGGTKGLGNE---------AELNECLR----------EWKTKCFKVTGSVCDASSRA 60
            L+TG + G+G             +    R          E       V   + D +   
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-----LMSTNFESAYHL 115
             + ++ ++ +   G L+++I N G    T         DLSF      + TN   A  +
Sbjct: 61  RNQLVIAELEAELGG-LDLVIINAGVGKGTS------LGDLSFKAFRETIDTNLLGAAAI 113

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            + A P  +A G G+++L+SSV  +        Y+A+K A++ LA++L  +  +  IR+ 
Sbjct: 114 LEAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVT 173

Query: 176 SVAPWFITTPLTE 188
            + P FI TPLT 
Sbjct: 174 VINPGFIDTPLTA 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 46/265 (17%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
               ++TGG+ G+G                    + +L E   E +    +V     D  
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-----LMSTNFESA 112
           +  + +K+++Q+   F G+++ LINN   N+         AEDLS      ++       
Sbjct: 61  NPEDVQKMVEQIDEKF-GRIDALINNAAGNFICP------AEDLSVNGWNSVIDIVLNGT 113

Query: 113 YHLSQLAHPLLKASGA-GNII-LVSSVC-----GVLSTNLGTIYAATKGAMNQLAKNLAC 165
           ++ SQ         G  GNII +V++       GV+ +      AA K  +  + + LA 
Sbjct: 114 FYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHS------AAAKAGVLAMTRTLAV 167

Query: 166 EWARD-NIRINSVAPWFIT-TPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           EW R   IR+N++AP  I  T   +     E+  +      P+ R G P+E++ L  FL 
Sbjct: 168 EWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLL 227

Query: 224 MPAASYITGQTICVDGGFTVNGFFF 248
              A+YI G  I +DGG  +N + F
Sbjct: 228 SDEAAYINGTCITMDGGQWLNQYPF 252

Length = 252

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 46/221 (20%), Positives = 78/221 (35%), Gaps = 41/221 (18%)

Query: 20  ALVTGGTKGLG------------------------NEAELNECLREWKTKCFKVTGSVCD 55
           A++TGG  G+G                          AEL     + K    +     CD
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQ-----CD 57

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF----LMSTNFES 111
            +S  +     K+    F G+++ILINN G            A  L       +  N   
Sbjct: 58  VTSWEQLAAAFKKAIEKF-GRVDILINNAGIL---DEKSYLFAGKLPPPWEKTIDVNLTG 113

Query: 112 AYHLSQLAHPLLKAS---GAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
             + + LA   +  +     G I+ + SV G+       +Y+A+K  +    ++LA    
Sbjct: 114 VINTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLE 173

Query: 169 RD-NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMER 208
               +R+N++ P F  TPL    ++ E  +         E 
Sbjct: 174 YKTGVRVNAICPGFTNTPLLPDLVAKEAEMLPSAPTQSPEV 214

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 4/191 (2%)

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           +V   VCD +S A+ + L+        G+L++L+NN G      P V+   ++ S ++  
Sbjct: 70  RVEAVVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDV 127

Query: 108 NFESAYHLSQLAHPLLKASGAGNIIL-VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
                +  ++ A   ++A G G +I+  +SV G  + +    YAA K  +  L +  A E
Sbjct: 128 TLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALE 187

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
            A   +RIN+VAP     P      S E  L+E+  R    R  EP EV++++AFL    
Sbjct: 188 AAEYGVRINAVAPSIAMHPFLAKVTSAE-LLDELAAREAFGRAAEPWEVANVIAFLASDY 246

Query: 227 ASYITGQTICV 237
           +SY+TG+ + V
Sbjct: 247 SSYLTGEVVSV 257

Length = 262

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 73.6 bits (180), Expect = 2e-15
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 34/254 (13%)

Query: 15  LQGMTALVTGGTKGLG--------NEAEL-----NECLREWKTKCFKVTGSVCDASSRAE 61
           L+G  ALVTG ++G+G        N+  L          E +   +++  +   A S   
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 62  REKLMKQVSSLFNG------------KLNILINNVGTN---YTTKPTVEYMAEDLSFLMS 106
             + +  V +L++             K +ILINN G     +  + T ++       ++S
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR----MVS 117

Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            N ++ + + Q A   L+ +    II +SS    +S      Y+ TKGA+N +   LA +
Sbjct: 118 VNAKAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQ 175

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
                I +N++ P FI T +    LSD    +     +   R GE ++++   AFL  P 
Sbjct: 176 LGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPD 235

Query: 227 ASYITGQTICVDGG 240
           + ++TGQ I V GG
Sbjct: 236 SRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 37/190 (19%)

Query: 18  MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER-EKLMKQVSSLFNGK 76
            T L+TG + G+G         R +     K+         RAER ++L  ++ + F  K
Sbjct: 1   KTVLITGASSGIG-----EATARRFAKAGAKLIL----TGRRAERLQELADELGAKFPVK 51

Query: 77  ---------------------------LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
                                      ++IL+NN G      P  E   ED   ++ TN 
Sbjct: 52  VLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNV 111

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
           +   ++++L  P++ A   G+II + S+ G      G +Y ATK A+ Q + NL  +   
Sbjct: 112 KGLLNVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIG 171

Query: 170 DNIRINSVAP 179
             IR+ ++ P
Sbjct: 172 TGIRVTNIEP 181

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 4e-15
 Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 48/261 (18%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDAS 57
            A+V GG + LG                   N  +     +E   +       G   DA+
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN----FESAY 113
           S      L + V  +F G++++L+ N G       T ++   D    +  N    F  A 
Sbjct: 64  SEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFIT-DFQLGDFDRSLQVNLVGYFLCAR 121

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
             S+L   +++    G II ++S  G + +   + Y+A K     L ++LA + A   I 
Sbjct: 122 EFSRL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178

Query: 174 INSVAPW-FITTPLTEPYLS-------------DEKFLEEVKCRTPMERPGEPKEVSSLV 219
           ++S+     + +P+ +  L              ++ ++++V    P++R  + ++V +++
Sbjct: 179 VHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKV----PLKRGCDYQDVLNML 234

Query: 220 AFLCMPAASYITGQTICVDGG 240
            F   P ASY TGQ+I V GG
Sbjct: 235 LFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 72.4 bits (177), Expect = 4e-15
 Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 13/194 (6%)

Query: 51  GSVCD-ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV--EYMAEDLSFLMST 107
           G+V D  S++A  +K+  +V     G++++L+NN G    T+  V  +   ED + ++ T
Sbjct: 60  GNVGDWDSTKAAFDKVKAEV-----GEIDVLVNNAGI---TRDVVFRKMTREDWTAVIDT 111

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           N  S +++++     +   G G II +SSV G       T Y+  K  ++    +LA E 
Sbjct: 112 NLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 171

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A   + +N+V+P +I T + +    D   LE++    P+ R G P E+ S+VA+L    +
Sbjct: 172 ATKGVTVNTVSPGYIGTDMVKAIRPD--VLEKIVATIPVRRLGSPDEIGSIVAWLASEES 229

Query: 228 SYITGQTICVDGGF 241
            + TG    ++GG 
Sbjct: 230 GFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 72.3 bits (177), Expect = 5e-15
 Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 32/251 (12%)

Query: 15  LQGMTALVTGGTKGLGNEA------------------------ELNECLREWKTKCFKVT 50
           L+   ALVTGG  G+G  A                        ++ + + E   K   + 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106

Query: 51  GSVCDAS-SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
           G + D   +R+   +  K +     G L+I+    G         +  +E      + N 
Sbjct: 107 GDLSDEKFARSLVHEAHKAL-----GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINV 161

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            + + L+Q A PLL    +  II  SS+     +     YAATK A+   ++ LA + A 
Sbjct: 162 FALFWLTQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAE 219

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR+N VAP  I T L       +  + +   +TPM+R G+P E++ +  +L    +SY
Sbjct: 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY 279

Query: 230 ITGQTICVDGG 240
           +T +   V GG
Sbjct: 280 VTAEVHGVCGG 290

Length = 294

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 6e-15
 Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 45/264 (17%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLRE--WKTKCFKVTGSV 53
           L+G  A+VTGG+ G+G                   +E  L         K    ++  + 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD    A+       V + F G +++L+NN G    +    +   +     +   + S  
Sbjct: 66  CDVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVS-TFADTTDDAWRDELELKYFSVI 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLST----NLGTIYAATKGAMNQLAKNLACEWAR 169
           + ++   PLL+AS A +I+ V+S   +L+     ++    AA  G +N L K+LA E A 
Sbjct: 124 NPTRAFLPLLRASAAASIVCVNS---LLALQPEPHMVATSAARAGLLN-LVKSLATELAP 179

Query: 170 DNIRINSV-------APW---FITTPLTEPYLSDEKFLEEVKCR--TPMERPGEPKEVSS 217
             +R+NS+         W   +      +P  S E +   +  +   P+ R G P E + 
Sbjct: 180 KGVRVNSILLGLVESGQWRRRYEARA--DPGQSWEAWTAALARKKGIPLGRLGRPDEAAR 237

Query: 218 LVAFLCMPAASYITGQTICVDGGF 241
            + FL  P +SY TG  I V GGF
Sbjct: 238 ALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 6e-15
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 27/190 (14%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           G   ++TG ++G+G                   NE  L    +E      +      D S
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---LMSTNFESAYH 114
                E+L++   + F G ++IL+NN G   T     + +  DLS    +M  N+  A +
Sbjct: 61  DAEACERLIEAAVARF-GGIDILVNNAGI--TMWSRFDEL-TDLSVFERVMRVNYLGAVY 116

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            +  A P LKAS  G I++VSS+ G+      + YAA+K A++    +L  E A D + +
Sbjct: 117 CTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAV 175

Query: 175 NSVAPWFITT 184
             V P F+ T
Sbjct: 176 TVVCPGFVAT 185

Length = 263

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 73.4 bits (180), Expect = 6e-15
 Identities = 60/262 (22%), Positives = 100/262 (38%), Gaps = 38/262 (14%)

Query: 14  SLQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCF-------KVTGS 52
           +L    A VTGG  G+G E              A+LN    E             +    
Sbjct: 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVAL 470

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             D +     +     V+  + G ++I++NN G   T+ P  E   ++    +       
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGG-VDIVVNNAGI-ATSSPFEETTLQEWQLNLDILATGY 528

Query: 113 YHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           + +++ A   ++  G  GNI+ ++S   V +    + Y+A K A   LA+ LA E     
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588

Query: 172 IRINSVAP-------------WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSL 218
           IR+N+V P             W          +  ++  E    RT ++R   P +++  
Sbjct: 589 IRVNTVNPDAVLQGSGIWDGEWREER-AAAYGIPADELEEHYAKRTLLKRHIFPADIAEA 647

Query: 219 VAFLCMPAASYITGQTICVDGG 240
           V FL    +   TG  I VDGG
Sbjct: 648 VFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 71.6 bits (176), Expect = 8e-15
 Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 23/204 (11%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNV---GTNYTTK-PTVEYMAEDLSFLMSTNF 109
            D  +  E  +     S+   GK++  +N       +Y  K   V    +D +  +S + 
Sbjct: 62  LD-ITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSL--DDFNENLSLHL 118

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGV----LSTNLGTI------YAATKGAMNQL 159
            S++  SQ      K  G GN++ +SS+ GV         GT       YAA K  +  L
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHL 178

Query: 160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV 219
            K LA  +   NIR+N V+P  I           E FL   K     +   +P ++   +
Sbjct: 179 TKYLAKYFKDSNIRVNCVSPGGILDN------QPEAFLNAYKKCCNGKGMLDPDDICGTL 232

Query: 220 AFLCMPAASYITGQTICVDGGFTV 243
            FL    + YITGQ I VD GF++
Sbjct: 233 VFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 27/193 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
              G T L+TGG  G+G                   NE  L E   E       +   VC
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVC 57

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGT--NYTTKPTVEYMAEDLSFLMSTNFESA 112
           D + R  R +L++ +   +   LN+LINN G   N       + + +D    ++TN  + 
Sbjct: 58  DVADRDSRRELVEWLKKEYP-NLNVLINNAGIQRNEDLTGAEDLL-DDAEQEIATNLLAP 115

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             L+ L  P L       II VSS    +      +Y ATK A++     L  +    ++
Sbjct: 116 IRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSV 175

Query: 173 RINSVAPWFITTP 185
            +  +AP  + T 
Sbjct: 176 EVIELAPPLVDTT 188

Length = 245

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS-QLAHPLLKASGAGNIIL 133
           G  +IL+NN     T        AE+L      N  +   LS Q A    K SG G II 
Sbjct: 95  GYPHILVNN-AAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG-GRIIN 152

Query: 134 VSS--VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL 191
           ++S    G +   L   YAATKGA++ L  +LA E A   I +N++ P     P    ++
Sbjct: 153 MTSGQFQGPMVGELA--YAATKGAIDALTSSLAAEVAHLGITVNAINP----GPTDTGWM 206

Query: 192 SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           ++E   + +    P  R GEPK+ + L+ FL    A +ITGQ I  +GGF
Sbjct: 207 TEE-IKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 56/270 (20%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVC 54
           L G   L+TG +KG+G                   +   L     + +      V     
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY- 113
           D SS   RE+L  +      G ++IL+NN G               L  +    + + + 
Sbjct: 65  DLSSPEAREQLAAEA-----GDIDILVNNAG---------AIPGGGLDDVDDAAWRAGWE 110

Query: 114 -------HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY---AATKGAMNQLAKNL 163
                   L++LA+P +KA G+G I+   +V G    N    Y   +A   A+    + L
Sbjct: 111 LKVFGYIDLTRLAYPRMKARGSGVIV---NVIGAAGENPDADYICGSAGNAALMAFTRAL 167

Query: 164 ACEWARDNIRINSVAPWFITTPLTEPY--------LSDEKFLEEVKCRTPMERPGEPKEV 215
             +   D +R+  V P  + T              L DE   +E+    P+ RP  P+EV
Sbjct: 168 GGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEV 227

Query: 216 SSLVAFLCMPAASYITGQTICVDGGFTVNG 245
           + LVAFL  P + Y +G  + VDGG +  G
Sbjct: 228 ADLVAFLASPRSGYTSGTVVTVDGGISARG 257

Length = 259

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 41/269 (15%)

Query: 15  LQGMTALVTGGTKGLGNE----------------------AELNECLREWKTKCFKVTGS 52
           L G  ALVTGG  G+G                          + + L      CF     
Sbjct: 16  LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCF----F 71

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS---FLMSTNF 109
            CD +   +  + +      F G L+I++NN G   T  P  +    +LS    +   N 
Sbjct: 72  HCDVTVEDDVSRAVDFTVDKF-GTLDIMVNNAG--LTGPPCPDIRNVELSEFEKVFDVNV 128

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
           +  +   + A  ++     G+I+ + SV   +       Y  +K A+  L +++A E  +
Sbjct: 129 KGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGK 188

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEE--VKCRTPMERPGE-------PKEVSSLVA 220
             IR+N V+P+ + T L   +L +++  E+     R    +            +V++ V 
Sbjct: 189 HGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVL 248

Query: 221 FLCMPAASYITGQTICVDGGFTVNGFFFR 249
           FL    A YI+G  + +DGGFT      R
Sbjct: 249 FLASDEARYISGLNLMIDGGFTCTNHSLR 277

Length = 280

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 4e-14
 Identities = 40/127 (31%), Positives = 69/127 (54%)

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +Q A   ++  G G+II +SS   ++       +  +K A+  + K  A E    NIR+N
Sbjct: 132 AQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVN 191

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +V+   I T   + + + E+   + +  +P+ R G+P++++    FLC   AS++TGQTI
Sbjct: 192 AVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTI 251

Query: 236 CVDGGFT 242
            VDGG T
Sbjct: 252 VVDGGTT 258

Length = 260

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 68.7 bits (168), Expect = 5e-14
 Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 24/184 (13%)

Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG ++G+G                   +EA L     +       V G   D    A
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           +  + +  +   F G L+ L+NN G     KP  E   E+   ++ TN   A++    A 
Sbjct: 60  DVRRAVDAMEEAFGG-LDALVNNAGVGVM-KPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW 180
           P L   G G I+ V S+ G  +   G  Y A+K  +  L++    +    NIR+ +V P 
Sbjct: 118 PALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPG 177

Query: 181 FITT 184
            + T
Sbjct: 178 SVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 68.8 bits (169), Expect = 7e-14
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 32/209 (15%)

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVG---TNYTTKPTVEYMAEDLSFLMSTNF 109
            CD S+  E ++L  +V   + GKL+ L++++          P ++   +     +    
Sbjct: 58  PCDVSNDEEIKELFAEVKKDW-GKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDI-- 114

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK-----GAMNQLAK--- 161
            SAY L  LA   L     G      S+  +      +   + +       M  +AK   
Sbjct: 115 -SAYSLVSLAKAALPIMNPG-----GSIVTL------SYLGSERVVPGYNVMG-VAKAAL 161

Query: 162 -----NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS 216
                 LA E  R  IR+N+++   I T         +K LE  + R P+ R    +EV 
Sbjct: 162 ESSVRYLAYELGRKGIRVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVTAEEVG 221

Query: 217 SLVAFLCMPAASYITGQTICVDGGFTVNG 245
           +  AFL    +S ITG+ I VDGG+ + G
Sbjct: 222 NTAAFLLSDLSSGITGEIIYVDGGYHIMG 250

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 68.4 bits (168), Expect = 7e-14
 Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 47/245 (19%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
             L+TGG  G+G                   NE    E     +    KV    CD S R
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            E  +  K++     G + ILINN G   + K  +E   E++      N  + +  ++  
Sbjct: 61  EEVYEAAKKIKKEV-GDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE---WARDNIRINS 176
            P +     G+I+ ++SV G++S      Y A+K A     ++L  E   + +  I+   
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 177 VAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG---EPKEVSSLVA--------FLCMP 225
           V P+FI T + +              +TP        EP+ V+  +          L +P
Sbjct: 179 VCPYFINTGMFQ------------GVKTPRPLLAPILEPEYVAEKIVRAILTNQQMLYLP 226

Query: 226 AASYI 230
             +Y 
Sbjct: 227 FYAYF 231

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 43/258 (16%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
           T LVTGG++GLG                    +E        E   +   +   V D   
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD--- 63

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL-MSTNFES----AY 113
           R + + +    +  F   +  ++NN   +++        A+D+++       E     A 
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-------YAATKGAMNQLAKNLACE 166
           +  Q A P ++  G G II +        TNL          Y   K A+  L +NLA E
Sbjct: 124 NTIQAALPGMREQGFGRIINI-------GTNLFQNPVVPYHDYTTAKAALLGLTRNLAAE 176

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
                I +N V+   + T        DE F + +   TP+ +   P+E +  V F   P 
Sbjct: 177 LGPYGITVNMVSGGLLRTTDASAATPDEVF-DLIAATTPLRKVTTPQEFADAVLFFASPW 235

Query: 227 ASYITGQTICVDGGFTVN 244
           A  +TGQ + VDGG  +N
Sbjct: 236 ARAVTGQNLVVDGGLVMN 253

Length = 253

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 74/266 (27%), Positives = 110/266 (41%), Gaps = 40/266 (15%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G   LVTGG  GLG                   + A L E L         V G   D
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE-LE--AAHGDAVVGVEGD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAE--DLSF--LMSTNFE 110
             S  + ++ + +  + F GK++ LI N G  +Y+T   V+   +  D +F  +   N +
Sbjct: 60  VRSLDDHKEAVARCVAAF-GKIDCLIPNAGIWDYST-ALVDIPDDRIDEAFDEVFHINVK 117

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
                 + A P L AS  G++I   S  G      G +Y A K A+  L K LA E A  
Sbjct: 118 GYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA-P 175

Query: 171 NIRINSVAPWFITTPLTEPY--------LSDEKFLEEVKCRTPMERPGEPKEVS-SLVAF 221
            +R+N VAP  +++ L  P         +S     + +K   P+ R  + +E + + V F
Sbjct: 176 YVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFF 235

Query: 222 LCMPAASYITGQTICVDGGFTVNGFF 247
                    TG  +  DGG  V GFF
Sbjct: 236 ATRGDTVPATGAVLNYDGGMGVRGFF 261

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 23/191 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL+G  AL+TGG+KG+G                   ++ EL E   E   K   V G   
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAA 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D    A+ ++ +  + + F G L++LI N G  +   P  E   E+   ++ TN   A++
Sbjct: 62  DVRDEADVQRAVDAIVAAF-GGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFY 119

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
             + A P LK  G G II +SS+ G      G  Y A+K  +   ++    +  +  I++
Sbjct: 120 TIKAAVPALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKV 178

Query: 175 NSVAPWFITTP 185
           +++ P  + T 
Sbjct: 179 STIMPGSVATH 189

Length = 237

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.3 bits (168), Expect = 3e-13
 Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 48/255 (18%)

Query: 15  LQGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGS- 52
           L G  ALVTG  +G+G                         L             V G+ 
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR-------VGGTA 260

Query: 53  -VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFE 110
              D ++     ++ + ++    G L+I+++N G   T   T+  M E     +++ N  
Sbjct: 261 LALDITAPDAPARIAEHLAERH-GGLDIVVHNAGI--TRDKTLANMDEARWDSVLAVNLL 317

Query: 111 SAYHLSQ--LAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEW 167
           +   +++  LA   L   G   I+ VSS+ G+ + N G T YAA+K  +  L + LA   
Sbjct: 318 APLRITEALLAAGALGDGGR--IVGVSSISGI-AGNRGQTNYAASKAGVIGLVQALAPLL 374

Query: 168 ARDNIRINSVAPWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCM 224
           A   I IN+VAP FI T +T   P+        E   R   +++ G P +V+  +A+L  
Sbjct: 375 AERGITINAVAPGFIETQMTAAIPFA-----TREAGRRMNSLQQGGLPVDVAETIAWLAS 429

Query: 225 PAASYITGQTICVDG 239
           PA+  +TG  + V G
Sbjct: 430 PASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 5e-13
 Identities = 60/244 (24%), Positives = 96/244 (39%), Gaps = 44/244 (18%)

Query: 31  NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
           NE  L    +  +   F V+    D SSR   + L     +L  G +  L++  G + + 
Sbjct: 33  NEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL--GPVTGLVHTAGVSPSQ 90

Query: 91  KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG----VLSTNLG 146
                 +  DL       + +A  L +    ++   GAG  ++++S  G     L+    
Sbjct: 91  ASPEAILKVDL-------YGTALVLEEFGK-VIAPGGAG--VVIASQSGHRLPALTAEQE 140

Query: 147 TIYAAT------------------KGAMNQLAKNL--------ACEWARDNIRINSVAPW 180
              A T                       Q+AK          A +W     RINS++P 
Sbjct: 141 RALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPG 200

Query: 181 FITTPLTEPYLSDEK--FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD 238
            I+TPL +  L+  +      +  ++P  RPG P E+++L  FL  P  S+ITG    VD
Sbjct: 201 IISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVD 260

Query: 239 GGFT 242
           GG T
Sbjct: 261 GGAT 264

Length = 275

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 65.9 bits (161), Expect = 6e-13
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 1/135 (0%)

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D + RA     +   ++   G+L+ L NN G      P  +        ++  N +   +
Sbjct: 55  DVTDRAAWAAALADFAAATGGRLDALFNNAGVG-RGGPFEDVPLAAHDRMVDINVKGVLN 113

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            +  A P LKA+    +I  +S   +       +Y+ATK A+  L + L  EWAR  IR+
Sbjct: 114 GAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRV 173

Query: 175 NSVAPWFITTPLTEP 189
             V PWF+ TP+   
Sbjct: 174 ADVWPWFVDTPILTK 188

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 8e-13
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 34/163 (20%)

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGV------------LSTN----------- 144
           NF    HL++   P +   GA  I+ V+S+ G              +T            
Sbjct: 71  NFLGLRHLTEALLPRMAPGGA--IVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAA 128

Query: 145 ----LGTIYAATKGAMNQLAKNLACEWARD-NIRINSVAPWFITTPLTEPYLS--DEKFL 197
               L T Y  +K A+       A  W     IR+N VAP  + TP+   + S   ++ +
Sbjct: 129 HPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERV 188

Query: 198 EEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
           +       M RP    E ++++ FLC  AA +I G  + VDGG
Sbjct: 189 DSDA--KRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 65.7 bits (161), Expect = 9e-13
 Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 39/205 (19%)

Query: 17  GMTALVTGGTKGLGNE-----AELNECL-------------REW---KTKCFKVTGSVCD 55
           G   ++TG   G+G E     A+    +                   +T   KV     D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            SS A   +  ++  + F  +L+ILINN G      P      +      + N+   + L
Sbjct: 61  LSSLASVRQFAEEFLARFP-RLDILINNAGIMA---PPRRLTKDGFELQFAVNYLGHFLL 116

Query: 116 SQLAHPLLKASGAGNIILVSSV------------CGVLSTNLGT--IYAATKGAMNQLAK 161
           + L  P+LKAS    I+ VSS+                +        Y  +K A     +
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176

Query: 162 NLACEWARDNIRINSVAPWFITTPL 186
            LA       + +N++ P  + T L
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 37/200 (18%)

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE-- 110
           V +  S  + EK++K     F G+++IL+NN G           +  D SF   +  +  
Sbjct: 66  VANYDSVEDGEKIVKTAIDAF-GRVDILVNNAG-----------ILRDRSFAKMSEEDWD 113

Query: 111 --------SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAK 161
                    ++ +++ A P ++    G II  SS  G L  N G   Y+A K  +  L+ 
Sbjct: 114 LVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAG-LYGNFGQANYSAAKLGLLGLSN 172

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA E A+ NI  N++AP    + +TE  + ++ F + +K          P+ V+ LV +
Sbjct: 173 TLAIEGAKYNITCNTIAP-AAGSRMTETVMPEDLF-DALK----------PEYVAPLVLY 220

Query: 222 LCMPAASYITGQTICVDGGF 241
           LC   +  +TG    V  G+
Sbjct: 221 LC-HESCEVTGGLFEVGAGW 239

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 20/202 (9%)

Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM-------- 66
           ++  T LVTG  +G+G      E L     K  KV  +V D  S A              
Sbjct: 1   IKDKTVLVTGANRGIGKA--FVESLLAHGAK--KVYAAVRDPGSAAHLVAKYGDKVVPLR 56

Query: 67  ------KQVSSLFNG--KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
                 + + +       ++++INN G         E   E L   M  N      L+Q 
Sbjct: 57  LDVTDPESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQA 116

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
             P+LKA+G G I+ ++SV  + +      Y+A+K A   L + L  E A     + SV 
Sbjct: 117 FAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSVH 176

Query: 179 PWFITTPLTEPYLSDEKFLEEV 200
           P  I T +       ++  E V
Sbjct: 177 PGPIDTRMAAGAGGPKESPETV 198

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 63.4 bits (154), Expect = 6e-12
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           T+Y   K A+  L ++ A E A   IR+N VAP     P   P+   E +  +V    P+
Sbjct: 171 TMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKV----PL 226

Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            +R    ++++ +V FL  P A YITG  I VDGG ++
Sbjct: 227 GQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 42/256 (16%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           G+ A+VTGG  GLG                     +     + +    C  V     D +
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGET-VAKLGDNCRFVP---VDVT 57

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESA 112
           S  + +  +    + F G+L+I++N  G       Y  K    +  E    +++ N    
Sbjct: 58  SEKDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGT 116

Query: 113 YHLSQLAHPLLKASGA------GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
           +++ +LA   +  +        G II  +SV           Y+A+KG +  +   +A +
Sbjct: 117 FNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARD 176

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDE--KFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            A   IR+ ++AP    TPL    L ++   FL   K      R G+P E + LV  +  
Sbjct: 177 LAPQGIRVVTIAPGLFDTPLLAG-LPEKVRDFLA--KQVPFPSRLGDPAEYAHLVQHII- 232

Query: 225 PAASYITGQTICVDGG 240
               Y+ G+ I +DG 
Sbjct: 233 -ENPYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 63.0 bits (153), Expect = 7e-12
 Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 33/242 (13%)

Query: 15  LQGMTALVTGGTKGLGNEAELNEC--------LREWKTKCFKVTGSVCDASSRA------ 60
           L     LVTG + G+G EA L           L   + K  +V   + +   R       
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 61  --------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
                     ++L ++++  +  +L+ +++N G      P  E   +    +   N  + 
Sbjct: 62  DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           + L+Q   PLL  S AG+++  SS  G         YA +K A   L + LA E+ + N+
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNL 180

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N + P    T +       E          P +    P ++  L  +L    +   TG
Sbjct: 181 RVNCINPGGTRTAMRASAFPTED---------PQKLK-TPADIMPLYLWLMGDDSRRKTG 230

Query: 233 QT 234
            T
Sbjct: 231 MT 232

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 63.0 bits (153), Expect = 8e-12
 Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 27/246 (10%)

Query: 17  GMTALVTGGTKGLGN-----------EAELNECLREWKTKCFKVTGS-----VCDASSRA 60
           G  ALVTG  +G+G            +  L +  RE  +K  K  G        D +  A
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEA 69

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---LMSTNFESAYHLSQ 117
           +    + +V   F G+L+ L+ N         T+E +   L+    +++ N      L++
Sbjct: 70  QVAAGVAEVLGQF-GRLDALVCNAAIADPHNTTLESL--SLAHWNRVLAVNLTGPMLLAK 126

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
              P L+A   G I+ ++S     S      YAA+KG +  L   LA     + IR+N+V
Sbjct: 127 HCAPYLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNAV 184

Query: 178 APWFITTPLTEPYLSDEKFLEEVK-CRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC 236
           +P +I     +P     + L E    + P  R G  ++V+++VA+L    A ++TGQ   
Sbjct: 185 SPGWIDA--RDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFV 242

Query: 237 VDGGFT 242
           VDGG T
Sbjct: 243 VDGGMT 248

Length = 255

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 10/139 (7%)

Query: 104 LMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNL 163
            M + F  AY +++ A     A G G++  VS    V  +  G +  A   A+  LA+ L
Sbjct: 96  AMDSKFWGAYRVARAAR---IAPG-GSLTFVSGFAAVRPSASGVLQGAINAALEALARGL 151

Query: 164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEK--FLEEVKCRTPMERPGEPKEVSSLVAF 221
           A E A   +R+N+V+P  + TPL      D +         R P  R G+P++V++ + F
Sbjct: 152 ALELA--PVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILF 209

Query: 222 LCMPAASYITGQTICVDGG 240
           L   A  + TG T+ VDGG
Sbjct: 210 LA--ANGFTTGSTVLVDGG 226

Length = 230

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 8e-12
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 3/158 (1%)

Query: 31  NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT 90
           NEA L     E        TG++ D + RA  +  +   ++   G+L++L NN G     
Sbjct: 34  NEAGLAALAAELGAGNA-WTGAL-DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG- 90

Query: 91  KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA 150
            P  +   E    ++  N +   + +  A P LKA+    +I  SS   +       +Y+
Sbjct: 91  GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYS 150

Query: 151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE 188
           ATK A+  L + L  EW R  IR+  V P F+ T + +
Sbjct: 151 ATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLD 188

Length = 260

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 62.6 bits (153), Expect = 9e-12
 Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 20/188 (10%)

Query: 14  SLQGMTALVTGGTKGLGNEAELNECL--------------REWKTKCFKVTGSVCDASSR 59
            ++G   LVTG  +G+G  A + + L                      +V     D +  
Sbjct: 3   DIKGKVVLVTGANRGIG-RAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDP 61

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
           A      +  S +      IL+NN G   T    +E   + L   M TN+     +++  
Sbjct: 62  ASVAAAAEAASDV-----TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAF 116

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            P+L A+G G I+ V SV   ++      Y+A+K A   L + L  E A    R+  V P
Sbjct: 117 APVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHP 176

Query: 180 WFITTPLT 187
             I T + 
Sbjct: 177 GPIDTDMA 184

Length = 238

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 19/207 (9%)

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           K  G   DA++      L K V  +F  ++++L+ + G   + K T ++   D    +  
Sbjct: 53  KAYGFGADATNEQSVIALSKGVDEIFK-RVDLLVYSAGIAKSAKIT-DFELGDFDRSLQV 110

Query: 108 N----FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNL 163
           N    F  A   S+L   +++    G II ++S  G + +   + Y+A K     L ++L
Sbjct: 111 NLVGYFLCAREFSKL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSL 167

Query: 164 ACEWARDNIRINSVAPW-FITTPLTEPYLS--------DEKFLEEVKC-RTPMERPGEPK 213
           A + A   I +NS+     + +P+ +  L          E  +E+    + P++R  + +
Sbjct: 168 ALDLAEHGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQ 227

Query: 214 EVSSLVAFLCMPAASYITGQTICVDGG 240
           +V +++ F   P ASY TGQ+I + GG
Sbjct: 228 DVLNMLLFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 38/248 (15%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G    + G ++GLG                   NE +L   +++  +K   +   V D
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKR-MKKTLSKYGNIHYVVGD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            SS      ++++ + + N  ++ L+  VG  Y    TVE  +  L  +++ + +   + 
Sbjct: 62  VSSTESARNVIEKAAKVLNA-IDGLVVTVG-GYVED-TVEEFSG-LEEMLTNHIKIPLYA 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGV---LSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
              +   LK     +I+LVSS+ G+       L   YA  K  + +  + LA E     I
Sbjct: 118 VNASLRFLKE--GSSIVLVSSMSGIYKASPDQLS--YAVAKAGLAKAVEILASELLGRGI 173

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N +AP  I+    EP   +  + +  K    M     P++ + ++ +L    A ++ G
Sbjct: 174 RVNGIAPTTISGDF-EP---ERNWKKLRKLGDDM---APPEDFAKVIIWLLTDEADWVDG 226

Query: 233 QTICVDGG 240
             I VDGG
Sbjct: 227 VVIPVDGG 234

Length = 238

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 61.8 bits (150), Expect = 2e-11
 Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 24/227 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQG  ALVTG + G+G                       L     E + +  K      D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 56  -ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
               +     + + V +L  G+L+IL+NN G      P  +    D + ++ TN     +
Sbjct: 61  VTDEQQVDAAVERTVEAL--GRLDILVNNAGI-MLLGPVEDADTTDWTRMIDTNLLGLMY 117

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            +  A P       G I+ +SSV G ++     +Y ATK  +N  ++ L  E     +R+
Sbjct: 118 TTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
             + P  + T L + +++     E  + R    R  + +++++ V +
Sbjct: 178 VVIEPGTVDTELRD-HITHTITKEAYEERISTIRKLQAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 21/193 (10%)

Query: 68  QVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE-----SAYHLS 116
           Q+   F       GKL+IL++ +   +  K   E +  D S      F      SAY L+
Sbjct: 73  QIEETFETIKQKWGKLDILVHCLA--FAGK---EELIGDFSATSREGFARALEISAYSLA 127

Query: 117 QLAH---PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            L     PL+  S  G+I+ ++ + GV +     +    K A+    + LA E    NIR
Sbjct: 128 PLCKAAKPLM--SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIR 185

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+++   I T  +         +  V+ + P+ R     EV +  AFL    AS ITGQ
Sbjct: 186 VNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQ 245

Query: 234 TICVDGGFTVNGF 246
           TI VD G+ + G 
Sbjct: 246 TIYVDAGYCIMGM 258

Length = 258

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 16/202 (7%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVG---TNYTTKPTVEYMAEDLSFLMSTNFE 110
           CD ++    + L   +   + GKL+ L++++            ++   E     M     
Sbjct: 63  CDVTNDESIDALFATIKKKW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDI--- 118

Query: 111 SAYHLSQLAH---PLLKASGAGNIILVSSVCGVLST-NLGTIYAATKGAMNQLAKNLACE 166
           SAY  + LA    PL+   G+  I+ ++ +       N   +  A K A+    + LA +
Sbjct: 119 SAYSFTALAKAARPLMNNGGS--ILTLTYLGSERVVPNYNVMGVA-KAALEASVRYLAAD 175

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
             ++ IR+N+++   I T L    + D  K L+E +   P+ R    +EV +  AFL   
Sbjct: 176 LGKEGIRVNAISAGPIRT-LAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSD 234

Query: 226 AASYITGQTICVDGGFTVNGFF 247
            +S ITG+ I VD G+ + G  
Sbjct: 235 LSSGITGEIIYVDSGYHIMGMG 256

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 5e-11
 Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 48/263 (18%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVC 54
           L G  A  T  +KG+G                   NE  L +   + K++    V+  V 
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT--VEYMAEDLSFLMSTNFESA 112
           D + R + E+ +K++ ++  G+ +I   + G     KP   +E   ED    +      A
Sbjct: 66  DLTKREDLERTVKELKNI--GEPDIFFFSTGG---PKPGYFMEMSMEDWEGAVKLLLYPA 120

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVC------GVLSTNLGTIYAATKGAMNQLAKNLACE 166
            +L++   P ++  G G II  +SV        +  +N+  I      +M  L + LA E
Sbjct: 121 VYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRI------SMAGLVRTLAKE 174

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSS 217
                I +N + P  I T        D         E+ L+E     P+ R GEP+E+  
Sbjct: 175 LGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGY 234

Query: 218 LVAFLCMPAASYITGQTICVDGG 240
           LVAFL     SYI G  I VDGG
Sbjct: 235 LVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 60.1 bits (146), Expect = 6e-11
 Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 23/185 (12%)

Query: 22  VTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAER 62
           +TG + G+G                   +   L+E  RE +    +    V D +  A+ 
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64

Query: 63  EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL 122
           E+        F G+++  +NN G     +   +   E+   +   N+    + +  A P 
Sbjct: 65  ERAADTAVERF-GRIDTWVNNAGVAVFGR-FEDVTPEEFRRVFDVNYLGHVYGTLAALPH 122

Query: 123 LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD--NIRINSVAPW 180
           L+  G G +I V S+ G  S  L   Y+A+K A+    ++L  E A D   I +  V P 
Sbjct: 123 LRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPT 182

Query: 181 FITTP 185
            + TP
Sbjct: 183 AMNTP 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 26/189 (13%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKV------------------TGSVCDASSRA 60
           + L+TG + G+G EA L     E K + ++V                  TG + D     
Sbjct: 4   SVLITGCSSGIGLEAAL-----ELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPE 58

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
             E+   +V +L + +L  L NN G   Y    T+    + +    STNF   + L+ L 
Sbjct: 59  SVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTIS--RQQMEQQFSTNFFGTHQLTMLL 116

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            P +   G G I++ SSV G++ST     YAA+K A+   +  L  E     I+++ + P
Sbjct: 117 LPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEP 176

Query: 180 WFITTPLTE 188
             I T  T+
Sbjct: 177 GPIRTRFTD 185

Length = 256

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 68/261 (26%), Positives = 103/261 (39%), Gaps = 50/261 (19%)

Query: 14  SLQGMTALVTGGTKGLGN-EA-------------------ELNECLREWKTKCFKVTGSV 53
            L G  A+VTG   GLG  EA                   + ++ L E +    K     
Sbjct: 9   DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-----------S 102
            D S RA  ++L+     L  G L+I++NN G   T    +  M+++             
Sbjct: 69  GDISQRATADELVATAVGL--GGLDIVVNNAGI--TRDRMLFNMSDEEWDAVIAVHLRGH 124

Query: 103 FLMSTNFESAYHLSQLAHPLLKASGA---GNIILVSSVCGVLSTNLGTIYAATKGAMNQL 159
           FL+ T   +AY  ++      KA+G    G I+  SS  G++       Y A K  +  L
Sbjct: 125 FLL-TRNAAAYWRAKA-----KAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITAL 178

Query: 160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV 219
             + A    R  +R N++ P    T +T     D   +E       ++ P  P+ V  LV
Sbjct: 179 TLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEA----GGID-PLSPEHVVPLV 232

Query: 220 AFLCMPAASYITGQTICVDGG 240
            FL  PAA+ + GQ   V G 
Sbjct: 233 QFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 75  GKLNILINNVGTNYTTKPTVEYMAE-DLSFLMSTNFESAYHLSQLAHPLLKASGAGNIIL 133
           G+L+I++NN G  Y     +E + E +    + TNF  A  ++Q   P L+   +G+II 
Sbjct: 76  GRLDIVVNNAG--YGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQ 133

Query: 134 VSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP------WF----- 181
           +SS+ G+ +    G IY A+K A+  +++ LA E A   I++  V P      W      
Sbjct: 134 ISSIGGISAFPMSG-IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAK 192

Query: 182 ITTPLTE 188
             TPL  
Sbjct: 193 RATPLDA 199

Length = 275

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 58.7 bits (142), Expect = 3e-10
 Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 37/258 (14%)

Query: 18  MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
           M  LVT  ++G+G                   NE  L + L+E K    +V     D S 
Sbjct: 1   MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES---AYHL 115
           + + + L+K+   L  G ++ L+ N G N   +P + + A    +L +         Y  
Sbjct: 60  KDDLKNLVKEAWELL-GGIDALVWNAG-NVRCEPCMLHEAGYSDWLEAALLHLVAPGYLT 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA-ATKGAMNQLAKNLACEWARDNIRI 174
           + L    L+    G ++ +SSV  V       + A  T+  + QLAK ++  +    IR 
Sbjct: 118 TLLIQAWLEKKMKGVLVYLSSV-SVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRA 176

Query: 175 NSVAPWFITTPLTEPYLS----------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            +V      TP     L+          +E +  EV  RTP++R G  +E+ SL+AFL  
Sbjct: 177 YTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLS 236

Query: 225 PAASYITGQTICVDGGFT 242
             A Y+ G TI  DG  T
Sbjct: 237 ENAEYMLGSTIVFDGAMT 254

Length = 259

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 34/257 (13%)

Query: 14  SLQGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVT 50
           SL+G   L+ GG K LG                       ++A+  E +   K    K  
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
               D ++ A  EKL     + F G+ +I IN VG     KP VE    +   + + N +
Sbjct: 65  AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTVG-KVLKKPIVEISEAEYDEMFAVNSK 122

Query: 111 SAYHLSQLAHPLLKASGAGNII-LVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
           SA+   + A   L  +  G I+ LV+S+ G   T   + YA +K  +    +  + E+  
Sbjct: 123 SAFFFIKEAGRHL--NDNGKIVTLVTSLLGAF-TPFYSAYAGSKAPVEHFTRAASKEFGA 179

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEK--FLEEVKCRTPMERPG--EPKEVSSLVAFLCMP 225
             I + +V P  + TP   P    E   + +     +P  + G  + +++   + FL + 
Sbjct: 180 RGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFL-VT 238

Query: 226 AASYITGQTICVDGGFT 242
              +ITGQTI ++GG+T
Sbjct: 239 DGWWITGQTILINGGYT 255

Length = 257

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 32/195 (16%)

Query: 19  TALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
             ++TG ++G+G                     +E  L E   E      +VT    D S
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEE-LRPGLRVTTVKADLS 59

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
             A  E+L++ +  L +G+ ++LINN G+            ++L      N  S   L+ 
Sbjct: 60  DAAGVEQLLEAIRKL-DGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 118 LAHPLLKASGA-GNIILVSSVCGV---LSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
                 K  G    ++ VSS   V       L   Y ++K A +   + LA E    ++R
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGL---YCSSKAARDMFFRVLAAE--EPDVR 173

Query: 174 INSVAPWFITTPLTE 188
           + S AP  + T +  
Sbjct: 174 VLSYAPGVVDTDMQR 188

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 54.6 bits (132), Expect = 6e-09
 Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 20/200 (10%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT-----VEYMAEDLSFLMSTN 108
            D     + E +  +++  + G+L+ L++++   +  K       V+   E  +  M  +
Sbjct: 67  LDVREPGQLEAVFARIAEEW-GRLDFLLHSIA--FAPKEDLHGRVVDCSREGFALAMDVS 123

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCG----VLSTNL-GTIYAATKGAMNQLAKNL 163
             S   +++LA PL+   G+   +L  S  G    V + NL G + AA + +     + L
Sbjct: 124 CHSFIRMARLAEPLMTNGGS---LLTMSYYGAEKVVENYNLMGPVKAALESS----VRYL 176

Query: 164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           A E     IR+++++P  + T         +  LE+   R P+ R  +  +V ++ AFL 
Sbjct: 177 AAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLA 236

Query: 224 MPAASYITGQTICVDGGFTV 243
             AA  +TG T+ +DGG+ +
Sbjct: 237 SDAARRLTGNTLYIDGGYHI 256

Length = 258

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 23/184 (12%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV----------------CDASSRAER 62
            ALVTG + G+G  A   +  R      ++V G+                  D +  A  
Sbjct: 6   VALVTGASSGIG-RATAEKLAR----AGYRVFGTSRNPARAAPIPGVELLELDVTDDASV 60

Query: 63  EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL 122
           +  + +V +   G++++L+NN G         E        L  TN      +++   P 
Sbjct: 61  QAAVDEVIARA-GRIDVLVNNAGVG-LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH 118

Query: 123 LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI 182
           ++A G+G II +SSV G L      +YAA+K A+   +++L  E  +  IR++ V P + 
Sbjct: 119 MRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYT 178

Query: 183 TTPL 186
            T  
Sbjct: 179 KTNF 182

Length = 270

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 19/193 (9%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S+ A     + ++    +G L  +I+N       KP     A+ L+ +M  +  + Y
Sbjct: 53  ADFSTNAGIMAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPL-ADVLARMMQIHVNAPY 110

Query: 114 HLSQLAHPLLKASG--AGNIILVSSVCGVLSTNLGT----IYAATKGAMNQLAKNLACEW 167
            L+     LL+  G  A +II ++    V+    G+     YAA+K A++ +  + A + 
Sbjct: 111 LLNLALEDLLRGHGHAASDIIHITDY--VVEK--GSDKHIAYAASKAALDNMTLSFAAKL 166

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A   +++NS+AP  I   L      D  + ++   ++ ++     +E+  LV +L    +
Sbjct: 167 A-PEVKVNSIAPALI---LFNEG-DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLL--TS 219

Query: 228 SYITGQTICVDGG 240
            Y+TG+++ VDGG
Sbjct: 220 CYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 49/227 (21%), Positives = 87/227 (38%), Gaps = 31/227 (13%)

Query: 12  RWSLQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFKVTGSV--- 53
           RW   G  ALVTG + G+G                 A   + +     +C          
Sbjct: 3   RWR--GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFP 60

Query: 54  --CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
             CD S+  +   +   + +   G +++ INN G     +P +    E    +   N  +
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQG-VDVCINNAGLARP-EPLLSGKTEGWKEMFDVNVLA 118

Query: 112 AYHLSQLAHPLLKASGA--GNIILVSSVCG--VLSTNLGTIYAATKGAMNQLAKNLACE- 166
               ++ A+  +K      G+II ++S+ G  V   ++   YAATK A+  L + L  E 
Sbjct: 119 LSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQEL 178

Query: 167 -WARDNIRINSVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGE 211
             A+ +IR  S++P  + T        +D +         P  +P +
Sbjct: 179 REAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIPCLKPED 225

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 54/238 (22%), Positives = 91/238 (38%), Gaps = 40/238 (16%)

Query: 21  LVTGGTKGLGNEAELNECLREWKTKCFKVTG-------------SVCDASSRAEREK-LM 66
           LV GG   LG+       ++ +K++ + V                V D+ S  E+ K ++
Sbjct: 5   LVYGGRGALGSA-----VVQAFKSRGWWVASIDLAENEEADASIIVLDSDSFTEQAKQVV 59

Query: 67  KQVSSLFNGKLNILINNVG--TNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
             V+ L  GK++ LI   G     + K        DL +  +    +++  S LA   L 
Sbjct: 60  ASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLW--TSFIASHLATKHLL 116

Query: 125 ASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEW--ARDNIRINSVAPWF 181
               G ++L  +   +  T  G I Y A K A++QL ++LA E          N++ P  
Sbjct: 117 --SGGLLVLTGAKAALEPTP-GMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILPVT 173

Query: 182 ITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG 239
           + TP     + D  F                + ++ L+ F    AA   +G  I V  
Sbjct: 174 LDTPANRKAMPDADFSSWTP----------LEFIAELILFWASGAARPKSGSLIPVVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 51.4 bits (123), Expect = 5e-08
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 8/164 (4%)

Query: 72  LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS-TNFESAYHLSQLAHPLLKASGAGN 130
           L   + +++++N          +  +           N      L + A  L+KA   G 
Sbjct: 27  LVVSRRDVVVHNAAILDDG--RLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGR 84

Query: 131 IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY 190
            IL+SSV G+        YAA+K A++ LA+  A E   + +   +VA            
Sbjct: 85  FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKG 144

Query: 191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
               + +     R    R   P+EV+  +            G  
Sbjct: 145 PVAPEEILGN--RRHGVRTMPPEEVARALLNA---LDRPKAGVC 183

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 102 SFLMSTNFESAYHLSQLAH---PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ 158
            FL++ N  SAY L+ +A     L+  +  G+I+ ++ + G        +    K ++  
Sbjct: 114 GFLLAQNI-SAYSLTAVAREAKKLM--TEGGSIVTLTYLGGERVVQNYNVMGVAKASLEA 170

Query: 159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSS 217
             K LA +  +D IR+N+++   I T L+   +      L+E++ R P+ R    +EV  
Sbjct: 171 SVKYLANDLGKDGIRVNAISAGPIRT-LSAKGVGGFNSILKEIEERAPLRRTTTQEEVGD 229

Query: 218 LVAFLCMPAASYITGQTICVDGGF 241
             AFL    +  +TG+ I VD G+
Sbjct: 230 TAAFLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 15/136 (11%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +  A  + L ++V     G  + +++  G      P  E    D    +++      
Sbjct: 37  VDITDEASIKALFEKV-----GHFDAIVSTAGDA-EFAPLAELTDADFQRGLNSKLLGQI 90

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTN---LGTIYAATKGAMNQLAKNLACEWARD 170
           +L +   P L  +  G+I L S   G+L+      G   A   GA+    +  A E  R 
Sbjct: 91  NLVRHGLPYL--NDGGSITLTS---GILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG 145

Query: 171 NIRINSVAPWFITTPL 186
            IRIN+V+P  +   L
Sbjct: 146 -IRINAVSPGVVEESL 160

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 45/251 (17%)

Query: 18  MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
             ALVTG  + +G                    +  E      E +    +      D +
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
             AE   L+ + S+   G + +L+NN     Y +  +    + D    M+TN  + + L+
Sbjct: 70  DEAEVRALVARASAAL-GPITLLVNNASLFEYDSAASFTRASWDR--HMATNLRAPFVLA 126

Query: 117 QLAHPLLKASGAG---NII---LVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           Q     L A   G   N+I   + +     LS      Y  +K A+    + LA   A  
Sbjct: 127 QAFARALPADARGLVVNMIDQRVWNLNPDFLS------YTLSKAALWTATRTLAQALAPR 180

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL-CMPAASY 229
            IR+N++ P   T P      S E F  +    TP+ R   P+E+++ V +L   P+   
Sbjct: 181 -IRVNAIGPG-PTLP--SGRQSPEDFARQHA-ATPLGRGSTPEEIAAAVRYLLDAPS--- 232

Query: 230 ITGQTICVDGG 240
           +TGQ I VDGG
Sbjct: 233 VTGQMIAVDGG 243

Length = 258

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 25/185 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+    L+TG + G+G                   N  +L E L        +    V D
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-EALAARLPYPGRHRWVVAD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAYH 114
            +S A RE +    +    G +N+LINN G N      +E    E +  L++ N  +   
Sbjct: 62  LTSEAGREAV-LARAREM-GGINVLINNAGVN--HFALLEDQDPEAIERLLALNLTAPMQ 117

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L++   PLL+A  +  ++ V S  G +       Y A+K A+   ++ L  E A   +R+
Sbjct: 118 LTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRV 177

Query: 175 NSVAP 179
             +AP
Sbjct: 178 LYLAP 182

Length = 263

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 12/97 (12%)

Query: 107 TNFESAYHLSQL--AHPLLKASGAGNIILVSSVCGV--LSTNLGTIYAATKGAMNQLAKN 162
           TNF +A  L+Q   A  + +  G+G+++L+SSV  V  L       YAA+K  +  L + 
Sbjct: 111 TNFVAA--LAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVK-AAYAASKAGVASLGEG 167

Query: 163 LACEWARDNIRINSVAPWFITTPLTE-----PYLSDE 194
           L  E A+  I+++++ P +I + +       P++ D 
Sbjct: 168 LRAELAKTPIKVSTIEPGYIRSEMNAKAKSTPFMVDT 204

Length = 248

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 48.4 bits (116), Expect = 8e-07
 Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 43/194 (22%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER-EKL------------ 65
            ALVTG + G+G         R    + + V G    A+ R ++ E L            
Sbjct: 5   VALVTGASSGIGKATA-----RRLAAQGYTVYG----AARRVDKMEDLASLGVHPLSLDV 55

Query: 66  -----MKQVSSLF---NGKLNILINNVGTNYTTKPTVEYMA-EDLSFL-----MSTNFES 111
                +K          G++++L+NN G  Y +     Y A ED+           N   
Sbjct: 56  TDEASIKAAVDTIIAEEGRIDVLVNNAG--YGS-----YGAIEDVPIDEARRQFEVNLFG 108

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           A  L+QL  P ++A  +G II +SS+ G + T LG  Y ATK A+   +  L  E A   
Sbjct: 109 AARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFG 168

Query: 172 IRINSVAPWFITTP 185
           I +  + P  I T 
Sbjct: 169 IDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 38/204 (18%)

Query: 15  LQGMTALVTGGTKGLGNEA------------------ELNECLREWKTKCFKVTGSVCDA 56
           L G   L+TG + G+G  A                  +L + + +      ++T +  DA
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVAD------RITRAGGDA 91

Query: 57  SSRA-------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE--DLSFLMST 107
            +           + L+  V     G ++ILINN G +   +P  E +    D+   M  
Sbjct: 92  MAVPCDLSDLDAVDALVADVEKRI-GGVDILINNAGRS-IRRPLAESLDRWHDVERTMVL 149

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS--TNLGTIYAATKGAMNQLAKNLAC 165
           N+ +   L +   P +   G G+II V++  GVLS  + L ++Y A+K A++ +++ +  
Sbjct: 150 NYYAPLRLIRGLAPGMLERGDGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRVIET 208

Query: 166 EWARDNIRINSVAPWFITTPLTEP 189
           EW    +   ++    + TP+  P
Sbjct: 209 EWGDRGVHSTTLYYPLVATPMIAP 232

Length = 293

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 45/224 (20%)

Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
            R  R  L G   L+TG + G+G                   N   L+E + E + K   
Sbjct: 362 RRDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT 421

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY--TTKPTVEYMAEDLSFLMS 106
                CD +  A  +  +K + +   G ++ L+NN G +   + + + +    D    M+
Sbjct: 422 AHAYTCDLTDSAAVDHTVKDILAEH-GHVDYLVNNAGRSIRRSVENSTDRF-HDYERTMA 479

Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLAC 165
            N+  A  L     P ++    G+++ VSS+ GV +     + Y A+K A++  +   A 
Sbjct: 480 VNYFGAVRLILGLLPHMRERRFGHVVNVSSI-GVQTNAPRFSAYVASKAALDAFSDVAAS 538

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP 209
           E   D I   +     I  PL                RTPM  P
Sbjct: 539 ETLSDGITFTT-----IHMPLV---------------RTPMIAP 562

Length = 657

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 24/191 (12%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           G  A++TGG  G+G                   ++  L + +   + + F V G +CD  
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
            R E   L  +   L  G ++++ +N G      P VE   +D  +++  +   + H  +
Sbjct: 66  HREEVTHLADEAFRLL-GHVDVVFSNAGI-VVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123

Query: 118 LAHP-LLKASGAGNIILVSSVCG-VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
              P LL+    G+++  +S  G V +  LG  Y   K  +  LA+ LA E   D I ++
Sbjct: 124 AFLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-YGVAKYGVVGLAETLAREVTADGIGVS 182

Query: 176 SVAPWFITTPL 186
            + P  + T L
Sbjct: 183 VLCPMVVETNL 193

Length = 275

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 23/188 (12%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            AL+TG + G+G                   ++  L     E ++   K      D S+ 
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
                 + ++   F G  ++LINN G  YT  P +E    D  +++  N  S +      
Sbjct: 68  EAIAPGIAELLEQF-GCPDVLINNAGMAYTG-PLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 120 HPLLKASGAGNIILVSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
            P ++A G G II VSS+    +    G  Y  +K A+    K LA E     IR+ ++ 
Sbjct: 126 LPGMRARGGGLIINVSSIAARNAFPQWGA-YCVSKAALAAFTKCLAEEERSHGIRVCTIT 184

Query: 179 PWFITTPL 186
              + TPL
Sbjct: 185 LGAVNTPL 192

Length = 241

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 26/195 (13%)

Query: 18  MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL------------ 65
           M  L+ GG+ G+G +A + + L  +      V  +        + + +            
Sbjct: 1   MNILIVGGSGGIG-KAMVKQLLERYPDA--TVHATYRHHKPDFQHDNVQWHALDVTDEAE 57

Query: 66  MKQVSSLFNGKLNILINNVGTNYT-TK-PTVEYMAEDLSFL---MSTNFESAYHLSQLAH 120
           +KQ+S  F  +L+ LIN VG  +T  K P     A D  F    ++ N   +  L++   
Sbjct: 58  IKQLSEQFT-QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFT 116

Query: 121 PLLKASGAGNIILVSSVCGVLSTN-LGTIYA--ATKGAMNQLAKNLACEWARD--NIRIN 175
           P LK S +    ++S+  G +S N LG  Y+  A+K A+N   K L+ EW R   +  + 
Sbjct: 117 PKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVL 176

Query: 176 SVAPWFITTPLTEPY 190
           ++ P    T L++P+
Sbjct: 177 ALHPGTTDTALSKPF 191

Length = 235

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 18/163 (11%)

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED-LSFLMSTNFES 111
           VCD+ S A        V  +    +++L+ N G        +E ++ED ++ +   N   
Sbjct: 62  VCDSKSVAA------AVERVTERHVDVLVCNAGVGLLGP--LEALSEDAMASVFDVNVFG 113

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              + Q   P +K  G+G I++ SSV G+       +Y A+K A+  L ++LA +    N
Sbjct: 114 TVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFN 173

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKE 214
           + ++ +    + T         EK L        +        
Sbjct: 174 VHLSLIECGPVHTAF------MEKVLGSP---EEVLDRTADDI 207

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G L++LINN G      P ++   E +     TN  +   +++   PLL+    G ++ +
Sbjct: 71  GGLDVLINNAGYG-AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR-RSRGLVVNI 128

Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
            SV GVL T     Y A+K A++ L+  L  E A   +++  V P  I +
Sbjct: 129 GSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIAS 178

Length = 274

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 9/115 (7%)

Query: 79  ILINNVGTNYTTKPTVEYMAED----LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           +LINNVG +Y   P   +  E     L  L+  N E    ++Q   P +     G II +
Sbjct: 135 VLINNVGVSY---PYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINI 191

Query: 135 SSVCGVL--STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT 187
            S   ++  S  L  +YAATK  ++Q ++ L  E+ +  I +    P ++ T + 
Sbjct: 192 GSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 27/185 (14%)

Query: 75  GKLNILINNVGTN-YTTKPTVE-----YMAEDLSFLMSTNFESAYHL-SQLAH--PLLKA 125
           G ++IL++++  +   +KP +E     Y+A      +ST   S+Y   S L+H  P++  
Sbjct: 118 GHIDILVHSLANSPEISKPLLETSRKGYLAA-----LST---SSYSFVSLLSHFGPIMNP 169

Query: 126 SGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD-NIRINSVAPWFITT 184
            G+  I L            G   ++ K A+    K LA E  R   IR+N+++      
Sbjct: 170 GGS-TISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS----AG 224

Query: 185 PLTEPYLSDEKFLEEV----KCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
           PL         F+E +    +   P+  P E ++V +  AFL  P AS ITG+T+ VD G
Sbjct: 225 PLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284

Query: 241 FTVNG 245
             V G
Sbjct: 285 ANVMG 289

Length = 299

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 14/201 (6%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD +S  E  ++   +   ++G L+ L++++G      P      + L  +    F +A+
Sbjct: 63  CDVASDDEINQVFADLGKHWDG-LDGLVHSIGF----APKEALSGDFLDSISREAFNTAH 117

Query: 114 HLSQLAHPLLKASG-------AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            +S  + P L  +           I+ +S +  V +     +    K ++    +  A  
Sbjct: 118 EISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAAC 177

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
             ++ IR N ++   I T L    ++D  K L  V    P+ R    +EV +  AFL   
Sbjct: 178 LGKEGIRCNGISAGPIKT-LAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSD 236

Query: 226 AASYITGQTICVDGGFTVNGF 246
            +S ITG+   VDGG+++N  
Sbjct: 237 LSSGITGEITYVDGGYSINAL 257

Length = 261

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 29/201 (14%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
             G  A++TG   G G                    +  L+  + E + +  +V G   D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S  A+ E L       F G +++L NN G         E    D  +++  N     H 
Sbjct: 64  VSDAAQVEALADAALERF-GAVHLLFNNAGVG-AGGLVWENSLADWEWVLGVNLWGVIHG 121

Query: 116 SQLAHPLLKASGA------GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNL--ACEW 167
            +   PL+ A+        G+I+  +S+ G+L+     IY  +K A+  L + L      
Sbjct: 122 VRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSL 181

Query: 168 ARDNIRINSVAPWFITTPLTE 188
             D +  + + P+F+ T + +
Sbjct: 182 VTDQVGASVLCPYFVPTGIWQ 202

Length = 287

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 15/179 (8%)

Query: 75  GKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH--PLLKASGAGNI 131
           G ++IL++++      TKP +E   +   +L + +  S   +S L H  P++   GA +I
Sbjct: 119 GSIDILVHSLANGPEVTKPLLETSRK--GYLAAISASSYSFVSLLQHFGPIMNPGGA-SI 175

Query: 132 ILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD-NIRINSVAPWFITTPLTEPY 190
            L       +    G   ++ K A+    + LA E  R   IR+N+++      PL    
Sbjct: 176 SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTIS----AGPLGSRA 231

Query: 191 LSDEKFLEEV----KCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
                F++++        P+++     EV +  AFL  P AS ITG TI VD G    G
Sbjct: 232 AKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG 290

Length = 303

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 29/189 (15%)

Query: 21  LVTGGTKGLG-------------------NEAELNEC---LREWKTKCFKVTGSVCDASS 58
           ++TG   GLG                   NE    E    LRE     F     V D S 
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 59  -RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
             A  +   ++      G +++++NN G           + ED  + ++ N        +
Sbjct: 64  LTALAQACEEKW-----GGIDVIVNNAGVASGGFFEELSL-EDWDWQIAINLMGVVKGCK 117

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
              PL K   +G I+ ++S+ G++     + Y   K  +  L++ L  E A D I ++ V
Sbjct: 118 AFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVV 177

Query: 178 APWFITTPL 186
            P F  T L
Sbjct: 178 CPSFFQTNL 186

Length = 270

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 31/125 (24%)

Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSF-----LMSTNFESAYHLSQLAHPLLKASGAG 129
           G++++L+NN G             E++          TN   A  ++Q   P ++   +G
Sbjct: 80  GRIDLLVNNAGYANGG------FVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG 133

Query: 130 NIILVSSVCG-----VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
            II +SS+ G      LS      Y ++K A+   +++L  E          + P+ I  
Sbjct: 134 KIINISSISGRVGFPGLSP-----YVSSKYALEGFSESLRLE----------LKPFGIDV 178

Query: 185 PLTEP 189
            L EP
Sbjct: 179 ALIEP 183

Length = 280

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 18/196 (9%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS---FLMSTNFE 110
           CD +S    E+    +     GK++ +++ +   Y  K  +     D S   + ++ +  
Sbjct: 62  CDVASDESIERAFATIKERV-GKIDGIVHAIA--YAKKEELGGNVTDTSRDGYALAQDI- 117

Query: 111 SAYHL---SQLAHPLLKASGAGNIIL--VSSVCGVLSTN-LGTIYAATKGAMNQLAKNLA 164
           SAY L   ++ A PLL   GA  + L    S   + + N +G   AA + ++  LA++L 
Sbjct: 118 SAYSLIAVAKYARPLLN-PGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLG 176

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
               +  IR+N+++   + T         +  L+E   RT        +EV +  AFL  
Sbjct: 177 ----KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLS 232

Query: 225 PAASYITGQTICVDGG 240
             ++ +TG  I VD G
Sbjct: 233 DLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.6 bits (100), Expect = 8e-05
 Identities = 23/91 (25%), Positives = 45/91 (49%)

Query: 153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEP 212
           K ++    + +A     + +R+N+++   I T          K L   +  TP+ R    
Sbjct: 163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI 222

Query: 213 KEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 223 EDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

Length = 262

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 26/129 (20%)

Query: 125 ASGAGN-----IILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIRINSVA 178
            S AG      II  SS  G L  ++G   Y+A K  +  L    A E  R  + +N++A
Sbjct: 141 ESKAGRAVDARIINTSSGAG-LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIA 199

Query: 179 PWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE-------PKEVSSLVAFLCMPAASYIT 231
           P    T +TE   ++            M +P E       P+ VS LV +L    +  +T
Sbjct: 200 P-AARTRMTETVFAEM-----------MAKPEEGEFDAMAPENVSPLVVWLGSAESRDVT 247

Query: 232 GQTICVDGG 240
           G+   V+GG
Sbjct: 248 GKVFEVEGG 256

Length = 286

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 25/193 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L+G    +TGG +G+G                   +EA   E   E       V G   
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGL----VVGGPL 57

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  A     +  V +   G +++L+NN G      P ++        ++  N      
Sbjct: 58  DVTDPASFAAFLDAVEADL-GPIDVLVNNAGVMPVG-PFLDEPDAVTRRILDVNVYGVIL 115

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            S+LA P +   G G+++ V+S+ G +       Y A+K A+         E     + +
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 175 NSVAPWFITTPLT 187
           + V P F+ T L 
Sbjct: 176 SVVLPSFVNTELI 188

Length = 273

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 1/110 (0%)

Query: 80  LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG 139
           L+NN G             +D    M  N      +++   PLL+ +  G ++ VSS+ G
Sbjct: 82  LVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKAFLPLLRRA-KGRVVNVSSMGG 140

Query: 140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP 189
            +    G  Y A+K A+   + +L  E     ++++ + P    T +T  
Sbjct: 141 RVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGN 190

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 26/187 (13%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKT-KCFK---VTGSVCDASSRAEREKL-------MK 67
             L+TG T G+G +  L+   + W+   C +   V   +   S+               K
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTK 62

Query: 68  QVSSLFNGKLNILINNVGTNYTTKPTVEYM------AEDLSFLMSTNFESAYHLSQLAHP 121
              S       + I N G         EYM      A  ++ + + N     +  +   P
Sbjct: 63  AALSQLPFIPELWIFNAGD-------CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQP 115

Query: 122 LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWF 181
            L  S    +++V S+   L+      Y A+K A+   A+ L  +     I + +V P F
Sbjct: 116 HL--SCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGF 173

Query: 182 ITTPLTE 188
           + TPLT+
Sbjct: 174 VATPLTD 180

Length = 240

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 26/188 (13%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV------------------CDASSRA 60
           + L+TG + G+G       C R  ++  ++V  +                    D +   
Sbjct: 6   SILITGCSSGIGAY-----CARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPE 60

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-EDLSFLMSTNFESAYHLSQLA 119
               L+ QV  L  G+L+ L NN G  Y     VE +  E L      NF   + L++  
Sbjct: 61  SIAALVAQVLELSGGRLDALFNN-GA-YGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV 118

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            P+++  G G I+  SS+ G++       Y A+K A+  L+  L  E     I ++ + P
Sbjct: 119 IPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEP 178

Query: 180 WFITTPLT 187
             I T   
Sbjct: 179 GPIETRFR 186

Length = 277

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 6/131 (4%)

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED-LSFLMSTNF 109
             + D +     + ++    + F G +++L+NN G  Y  +  +E      +      N 
Sbjct: 54  ARLLDVTDFDAIDAVVADAEATF-GPIDVLVNNAG--YGHEGAIEESPLAEMRRQFEVNV 110

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT-IYAATKGAMNQLAKNLACEWA 168
             A  +++   P ++A   G+I+ ++S+ G L T  G   Y  +K A+  ++++LA E A
Sbjct: 111 FGAVAMTKAVLPGMRARRRGHIVNITSMGG-LITMPGIGYYCGSKFALEGISESLAKEVA 169

Query: 169 RDNIRINSVAP 179
              I + +V P
Sbjct: 170 PFGIHVTAVEP 180

Length = 277

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 23/181 (12%)

Query: 18  MTALVTGGTKGLGN-------------------EAELNECLREWKTKCFKVTGSVCDASS 58
           M  LVTG T G G                    +  L E   E     +       D  +
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQ---LDVRN 57

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
           RA  E+++  + + +   +++L+NN G     +P  +   ED   ++ TN +   ++++ 
Sbjct: 58  RAAIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
             P +     G+II + S  G      G +Y ATK  + Q + NL  +     +R+  + 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 179 P 179
           P
Sbjct: 177 P 177

Length = 248

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 9e-04
 Identities = 45/214 (21%), Positives = 76/214 (35%), Gaps = 29/214 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC--FKVTGS 52
           SL G   +VTG  +G+G                    EAEL     E         V   
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLSFLMSTNFES 111
           V D    A  +   ++    F G +++++ N G  +  +   V+   +    ++  N   
Sbjct: 66  VTD---LAAMQAAAEEAVERF-GGIDVVVANAGIASGGSVAQVD--PDAFRRVIDVNLLG 119

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            +H  +   P L     G ++ VSS+    +      Y A+K  +   A  L  E A   
Sbjct: 120 VFHTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHG 178

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP 205
           + + S    +I T L     +D     E++ R P
Sbjct: 179 VTVGSAYLSWIDTDLVRDADADLPAFRELRARLP 212

Length = 296

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+L+ +++N G      P  +   E    +M  N  + + L+Q   PLL  S A +++  
Sbjct: 91  GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFT 150

Query: 135 SSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
           SS  G     N G  YA +K A   + + LA E+   N+R+N + P
Sbjct: 151 SSSVGRQGRANWGA-YAVSKFATEGMMQVLADEYQGTNLRVNCINP 195

Length = 247

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 12/198 (6%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK-----PTVEYMAEDLSFLMSTN 108
            D S     + L + +     GK++ ++++V   +  K       +E   E  +  M  +
Sbjct: 62  LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVA--FAPKEALEGSFLETSKEAFNIAMEIS 118

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
             S   L++   PLL    +  ++ +S + GV       +    K A+    + LA +  
Sbjct: 119 VYSLIELTRALLPLLNDGAS--VLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLG 176

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKF-LEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           +  IR+N+++   I T L    + D +  L+  +   P+++    +EV +   +L    +
Sbjct: 177 KKGIRVNAISAGPIKT-LAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLS 235

Query: 228 SYITGQTICVDGGFTVNG 245
           S +TG+   VD G+ + G
Sbjct: 236 SGVTGEIHYVDAGYNIMG 253

Length = 274

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 136 SVCGVLSTNL--GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
           S+  V+  N   G+  AA K A++      A  +    I IN+VA      P  +  LS 
Sbjct: 125 SIISVVPENPPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG-LS- 182

Query: 194 EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
                    RTP   P    E++ L  FL  PAA +ITGQT+ V  G
Sbjct: 183 ---------RTP---PPVAAEIARLALFLTTPAARHITGQTLHVSHG 217

Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.98
PRK07024	257	short chain dehydrogenase; Provisional	99.98
COG1028	251	FabG Dehydrogenases with different specificities (	99.98
PRK07806	248	short chain dehydrogenase; Provisional	99.98
PLN02780	320	ketoreductase/ oxidoreductase	99.98
PRK06924	251	short chain dehydrogenase; Provisional	99.98
PRK06194	287	hypothetical protein; Provisional	99.98
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
PRK05854	313	short chain dehydrogenase; Provisional	99.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK09072	263	short chain dehydrogenase; Provisional	99.97
PRK07904	253	short chain dehydrogenase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08251	248	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.96
PRK07326	237	short chain dehydrogenase; Provisional	99.96
PRK07102	243	short chain dehydrogenase; Provisional	99.96
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.96
KOG1208	314	consensus Dehydrogenases with different specificit	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.95
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.95
PRK06101	240	short chain dehydrogenase; Provisional	99.95
PRK08177	225	short chain dehydrogenase; Provisional	99.95
PRK09291	257	short chain dehydrogenase; Provisional	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.94
PRK06953	222	short chain dehydrogenase; Provisional	99.94
PRK08219	227	short chain dehydrogenase; Provisional	99.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.91
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.81
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.81
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.78
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.78
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.78
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.78
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.75
PLN02572	442	UDP-sulfoquinovose synthase	99.73
PLN02653	340	GDP-mannose 4,6-dehydratase	99.72
PRK06720	169	hypothetical protein; Provisional	99.72
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.71
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.69
PLN00198	338	anthocyanidin reductase; Provisional	99.68
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.68
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.68
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.68
PLN02650	351	dihydroflavonol-4-reductase	99.67
PLN02214	342	cinnamoyl-CoA reductase	99.67
PLN02583	297	cinnamoyl-CoA reductase	99.66
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.66
PLN02240	352	UDP-glucose 4-epimerase	99.65
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.65
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.62
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.62
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.61
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.61
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.59
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.58
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.57
PLN02686	367	cinnamoyl-CoA reductase	99.57
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.56
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.56
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.56
PLN02427	386	UDP-apiose/xylose synthase	99.54
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.52
PLN02260	668	probable rhamnose biosynthetic enzyme	99.51
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.51
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.51
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.5
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.48
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.46
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.46
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.45
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.44
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.43
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.43
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.42
PLN02778	298	3,5-epimerase/4-reductase	99.41
PLN02206	442	UDP-glucuronate decarboxylase	99.39
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.32
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.31
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.27
CHL00194	317	ycf39 Ycf39; Provisional	99.26
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.25
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.24
PLN02996	491	fatty acyl-CoA reductase	99.24
PRK05865	854	hypothetical protein; Provisional	99.21
PRK07201	657	short chain dehydrogenase; Provisional	99.16
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.15
PLN02260	668	probable rhamnose biosynthetic enzyme	99.15
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.05
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.04
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.02
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.01
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.93
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.85
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.8
PRK12320	699	hypothetical protein; Provisional	98.78
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.71
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.68
PLN00016	378	RNA-binding protein; Provisional	98.66
PLN02503	605	fatty acyl-CoA reductase 2	98.63
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.49
PRK08309	177	short chain dehydrogenase; Provisional	98.33
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.3
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.27
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.11
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.09
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.98
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.86
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.84
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.8
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.61
COG2910	211	Putative NADH-flavin reductase [General function p	97.54
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.45
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.42
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.38
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.35
KOG2774	366	consensus NAD dependent epimerase [General functio	97.31
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.15
PRK14982	340	acyl-ACP reductase; Provisional	96.88
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	96.71
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.7
PRK09620	229	hypothetical protein; Provisional	96.68
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.6
PLN00106	323	malate dehydrogenase	96.53
KOG2733	423	consensus Uncharacterized membrane protein [Functi	96.34
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.24
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.23
PTZ00325	321	malate dehydrogenase; Provisional	96.05
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.8
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.8
PRK05086	312	malate dehydrogenase; Provisional	95.58
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.5
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.28
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	94.92
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	94.61
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.22
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	94.14
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.85
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	93.61
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	93.49
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	93.41
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	93.26
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.91
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	92.72
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	92.33
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	92.25
PRK15116	268	sulfur acceptor protein CsdL; Provisional	92.03
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	91.79
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	91.68
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	91.58
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	91.54
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	91.47
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	91.37
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	91.31
PRK06849	389	hypothetical protein; Provisional	91.25
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	91.14
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	90.84
PF12241	237	Enoyl_reductase: Trans-2-enoyl-CoA reductase catal	90.73
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	90.65
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	90.55
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	90.51
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	90.38
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	90.33
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	89.77
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	89.66
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	89.34
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	88.97
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	88.9
PRK13940	414	glutamyl-tRNA reductase; Provisional	88.82
PRK08306	296	dipicolinate synthase subunit A; Reviewed	88.71
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	88.6
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	88.34
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	88.33
PRK06719	157	precorrin-2 dehydrogenase; Validated	88.09
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	87.99
KOG3851	446	consensus Sulfide:quinone oxidoreductase/flavo-bin	87.68
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	87.46
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	87.25
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.96
COG2894	272	MinD Septum formation inhibitor-activating ATPase	86.71
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	86.52
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	86.3
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	86.3
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	86.24
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	86.22
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	86.11
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	85.75
TIGR03029	274	EpsG chain length determinant protein tyrosine kin	85.47
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	85.12
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	85.06
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	84.76
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	84.67
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	84.23
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.13
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	83.95
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	83.58
TIGR01007	204	eps_fam capsular exopolysaccharide family. This mo	83.52
PF13614	157	AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ	83.38
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	83.26
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	83.25
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	83.17
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	83.08
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	82.98
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	82.86
TIGR03018	207	pepcterm_TyrKin exopolysaccharide/PEPCTERM locus t	82.84
PLN02740	381	Alcohol dehydrogenase-like	82.77
PRK12480	330	D-lactate dehydrogenase; Provisional	82.48
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	82.47
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	82.24
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	82.18
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	82.16
PF04723	150	GRDA: Glycine reductase complex selenoprotein A; I	82.13
PRK13771	334	putative alcohol dehydrogenase; Provisional	82.01
PRK13886	241	conjugal transfer protein TraL; Provisional	81.9
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.47
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	81.42
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	81.4
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	81.1
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	80.85
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	80.76

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2.2e-48  Score=289.67  Aligned_cols=228  Identities=32%  Similarity=0.438  Sum_probs=203.2

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ....+..|+++||||++|||                   +....++.+..+... .....+.||++++++++.++++..+
T Consensus         8 ~~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k   86 (256)
T KOG1200|consen    8 VVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEK   86 (256)
T ss_pred             HHHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHH
Confidence            34567889999999999999                   223344444444433 2456789999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH--hCCCceEEEecccccccCCCCChhh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK--ASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~--~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+ +.++++|||||+.. +..+.....++|+..+.+|+.+.|.++|++.+.|.  ++++++||++||+.+..+.-+...|
T Consensus        87 ~~-g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnY  164 (256)
T KOG1200|consen   87 SL-GTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNY  164 (256)
T ss_pred             hc-CCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhh
Confidence            99 89999999999986 77788899999999999999999999999999954  4445699999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +++|+++.+|+|++|+|++++|||||.|+||++.|||....  .+.....+...+|++|++++||||..+.||+|+.++|
T Consensus       165 AAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssY  242 (256)
T KOG1200|consen  165 AASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSY  242 (256)
T ss_pred             hhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhcccccc
Confidence            99999999999999999999999999999999999999876  4677888899999999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +||+.+.|+||+.|
T Consensus       243 iTG~t~evtGGl~m  256 (256)
T KOG1200|consen  243 ITGTTLEVTGGLAM  256 (256)
T ss_pred             ccceeEEEeccccC
Confidence            99999999999875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-45  Score=295.68  Aligned_cols=229  Identities=28%  Similarity=0.417  Sum_probs=199.1

Q ss_pred             cCCCCCEEEEecCCCCcC-----------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           13 WSLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +++++|++|||||++|||                 .....++..+.+.+.+.++.++.+|++++++++++++++.+.+ +
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   82 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM-G   82 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc-C
Confidence            467899999999999999                 1111223334444445678889999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.++..+.+....|++||+
T Consensus        83 ~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~  161 (251)
T PRK12481         83 HIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKS  161 (251)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHH
Confidence            9999999999876 56777889999999999999999999999999998765 589999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |+++|+++++.|++++||+||.|+||+++|++.+.....+.....+....|.+++.+|+|+|+++.||+++.+.+++||.
T Consensus       162 a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~  241 (251)
T PRK12481        162 AVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYT  241 (251)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCce
Confidence            99999999999999999999999999999998766543344444556678999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      |.+|||+..
T Consensus       242 i~vdgg~~~  250 (251)
T PRK12481        242 LAVDGGWLA  250 (251)
T ss_pred             EEECCCEec
Confidence            999999754

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-44  Score=296.61  Aligned_cols=229  Identities=29%  Similarity=0.347  Sum_probs=200.4

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++|||||++|||                   +.++++++.+++... +.++.++.+|++|+++++++++++. ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh
Confidence            57899999999999999                   445566666666543 4568889999999999999999986 57


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|+++|
T Consensus        84 -g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         84 -GEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             -CCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence             89999999999865 5677889999999999999999999999999999988889999999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +|+.+|+++++.|++++|||||+|+||+++|++.....         ..++..+.+....|.+++.+|+|+|++++||++
T Consensus       162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s  241 (263)
T PRK08339        162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLAS  241 (263)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999854321         113344555667899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccc
Q 041276          225 PAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      +.+.++||+.+.+|||+.++-
T Consensus       242 ~~~~~itG~~~~vdgG~~~~~  262 (263)
T PRK08339        242 DLGSYINGAMIPVDGGRLNSV  262 (263)
T ss_pred             chhcCccCceEEECCCccccC
Confidence            999999999999999988753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.8e-44  Score=292.63  Aligned_cols=231  Identities=26%  Similarity=0.325  Sum_probs=197.0

Q ss_pred             cCCCCCEEEEecCC--CCcCc---------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGT--KGLGN---------------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        13 ~~l~~k~vlItGas--~giG~---------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +++++|+++||||+  +|||.                     ..+.++..+++.+.+.++.++.+|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89990                     01234444555544445678899999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC
Q 041276           70 SSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG  146 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  146 (251)
                      .+++ +++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+.+
T Consensus        82 ~~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         82 KQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence            9999 899999999997642   256778899999999999999999999999999975  3899999999999998999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+.....++..+......|.+++.+|+|+|+.+.||+++.
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999999999999987544222333445556778999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccccc
Q 041276          227 ASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~~~~  246 (251)
                      +.++|||+|.+|||+.+.++
T Consensus       239 ~~~~tG~~i~vdgg~~~~~~  258 (258)
T PRK07370        239 ASGITGQTIYVDAGYCIMGM  258 (258)
T ss_pred             hccccCcEEEECCcccccCC
Confidence            99999999999999887653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.7e-44  Score=290.81  Aligned_cols=225  Identities=18%  Similarity=0.237  Sum_probs=192.6

Q ss_pred             CCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||+  +|||                  +.+++.+..+++.  ..++.++.+|++++++++++++++.+++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3689999999999  8999                  1112222222222  2356788999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|++|||||...+   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||+++|.++..+.+.+..|+
T Consensus        82 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~  158 (252)
T PRK06079         82 -GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMG  158 (252)
T ss_pred             -CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhH
Confidence             899999999998642   256778899999999999999999999999999975  38999999999998888999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++.......++..+.+..+.|.+++.+|+|||+++.||+++.++++
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~i  238 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGV  238 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999999876544334555556667899999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      +|++|.+|||+++
T Consensus       239 tG~~i~vdgg~~~  251 (252)
T PRK06079        239 TGDIIYVDKGVHL  251 (252)
T ss_pred             cccEEEeCCceec
Confidence            9999999999754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-44  Score=291.65  Aligned_cols=231  Identities=22%  Similarity=0.264  Sum_probs=194.6

Q ss_pred             CCCCCEEEEecC--CCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGG--TKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGa--s~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||  ++|||                  ..++..+..+++.........+.+|++|+++++++++++.+++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            478999999997  67999                  1122333444444332345678999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC---CC-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           74 NGKLNILINNVGTNYTT---KP-TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                       +++|++|||||+....   .+ +.+.+.++|+..+++|+.+++.+++.++|.|++++ |+||++||.++..+.+++..|
T Consensus        83 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~~~~~~~Y  160 (261)
T PRK08690         83 -DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRAIPNYNVM  160 (261)
T ss_pred             -CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccCCCCcccc
Confidence             8999999999986421   12 34678899999999999999999999999997654 899999999999888999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +++|+|+.+|+++++.|++++||+||.|+||+++|++.+.....++..+.+....|.+++.+|+|||+.+.||+++.+.+
T Consensus       161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~  240 (261)
T PRK08690        161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSG  240 (261)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999999999999999987654333344445556689999999999999999999999999


Q ss_pred             ccccEEEeCCCcccccc
Q 041276          230 ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~  246 (251)
                      +||+.|.+|||+.+.+.
T Consensus       241 ~tG~~i~vdgG~~~~~~  257 (261)
T PRK08690        241 ITGEITYVDGGYSINAL  257 (261)
T ss_pred             cceeEEEEcCCcccccc
Confidence            99999999999988664

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.7e-44  Score=292.65  Aligned_cols=229  Identities=17%  Similarity=0.237  Sum_probs=190.2

Q ss_pred             CCCCEEEEecCCC--CcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTK--GLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~--giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++|++|||||++  |||                  +.....+..+++.+......++++|++|.++++++++++.+++ 
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~-   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW-   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh-
Confidence            6789999999996  999                  1111112223332221223578999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           75 GKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      +++|++|||||.....   .++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+.+..|++
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhh
Confidence            8999999999976421   46678899999999999999999999999999974  389999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|+.+|+++|+.|++++|||||+|+||+++|++.......+..........|++++.+|+|+|+.++||+++.+.++|
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~it  241 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVT  241 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccC
Confidence            99999999999999999999999999999999998654322222233444567889999999999999999999999999


Q ss_pred             ccEEEeCCCcccccc
Q 041276          232 GQTICVDGGFTVNGF  246 (251)
Q Consensus       232 G~~i~vdgG~~~~~~  246 (251)
                      |+.|.+|||+.+..+
T Consensus       242 G~~i~vdgG~~~~~~  256 (271)
T PRK06505        242 GEIHFVDSGYNIVSM  256 (271)
T ss_pred             ceEEeecCCcccCCc
Confidence            999999999876654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-43  Score=289.78  Aligned_cols=230  Identities=19%  Similarity=0.241  Sum_probs=192.5

Q ss_pred             CCCCCEEEEecCCC--CcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTK--GLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~--giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||++  |||                  +.+..++..+++........++.+|++|+++++++++++.+++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            46789999999998  888                  1122233344444331223467899999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|++|||+|....   ..++.+.+.++|++.+++|+.+++.+++.+.|+|++  .|+||++||.++..+.+.+..|+
T Consensus        85 -g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         85 -GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             -CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence             899999999997542   245678899999999999999999999999999964  38999999999988888899999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++.......++..+......|.+++.+|+|+|+.++||+++.+.++
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~i  241 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGV  241 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccC
Confidence            99999999999999999999999999999999999865332223334445567899999999999999999999999999


Q ss_pred             cccEEEeCCCcccccc
Q 041276          231 TGQTICVDGGFTVNGF  246 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~  246 (251)
                      ||+.|.+|||+.+.+.
T Consensus       242 tG~~i~vdgG~~~~~~  257 (260)
T PRK06603        242 TGEIHYVDCGYNIMGS  257 (260)
T ss_pred             cceEEEeCCcccccCc
Confidence            9999999999887553

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-43  Score=289.33  Aligned_cols=232  Identities=21%  Similarity=0.320  Sum_probs=194.5

Q ss_pred             CCcccCCCCCEEEEecCC--CCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGT--KGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas--~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +.+.+++++|++|||||+  +|||                   +.+. .+..+++.+....+.++.+|+++.++++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   80 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELDAPIFLPLDVREPGQLEAVFA   80 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhccceEEecCcCCHHHHHHHHH
Confidence            456677899999999999  4999                   1111 11122222221235678999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN  144 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~  144 (251)
                      ++.+.+ +++|++|||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+
T Consensus        81 ~~~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~  157 (258)
T PRK07533         81 RIAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVE  157 (258)
T ss_pred             HHHHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCc
Confidence            999999 899999999997642   245678899999999999999999999999999964  48999999999988888


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      .+..|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.....++..+......|.+++.+|+|+|+.++||++
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s  237 (258)
T PRK07533        158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLAS  237 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999976543334444555667899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 041276          225 PAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +.+.++||+.+.+|||+++.
T Consensus       238 ~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        238 DAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             hhhccccCcEEeeCCccccc
Confidence            99999999999999998754

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-43  Score=286.59  Aligned_cols=231  Identities=29%  Similarity=0.413  Sum_probs=204.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++++|++|||||++|||                   +.++++++.+++...+.++.++.+|++++++++++++++.+++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            457889999999999999                   4556666677776666778899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~s  152 (251)
                       +++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||.++. .+.+.+..|++|
T Consensus        82 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  160 (254)
T PRK07478         82 -GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS  160 (254)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence             899999999998654567778899999999999999999999999999998888999999999887 567888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|++.++++++.|+.++||+||+|+||+++|++.+.....++.........|.+++.+|+|+|+.++||+++.+.++||
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  240 (254)
T PRK07478        161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTG  240 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCC
Confidence            99999999999999999999999999999999988765444444445555678888999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                      +.|.+|||+.+.
T Consensus       241 ~~~~~dgg~~~~  252 (254)
T PRK07478        241 TALLVDGGVSIT  252 (254)
T ss_pred             CeEEeCCchhcc
Confidence            999999998754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-43  Score=291.15  Aligned_cols=227  Identities=19%  Similarity=0.235  Sum_probs=188.5

Q ss_pred             CCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++|++|||||+  +|||                  ....+.+..+++.+. +.. .++.+|++|.++++++++++.+.
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999997  7999                  111112223333222 333 57899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           73 FNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      + +++|++|||||+..+   ..++.+.+.++|++++++|+.+++.+++.++|+|+++  |+||++||.++..+.+.+..|
T Consensus        81 ~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         81 L-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             c-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCCCcchhh
Confidence            9 899999999998642   2567788999999999999999999999999999763  899999999999888889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++..................|++++.+|+|+|++++||+++.+.+
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~  237 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSG  237 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhc
Confidence            99999999999999999999999999999999999876543211111222234578899999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      +||++|.+|||+.+.
T Consensus       238 itG~~i~vdGG~~~~  252 (274)
T PRK08415        238 VTGEIHYVDAGYNIM  252 (274)
T ss_pred             ccccEEEEcCccccc
Confidence            999999999998764

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-43  Score=284.97  Aligned_cols=226  Identities=32%  Similarity=0.517  Sum_probs=197.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++++|++|||||++|||                   +.++++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999                   4455666677776666678889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCC-C-CChhhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLST-N-LGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~-~-~~~~Y~  150 (251)
                       +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ +|+||++||.++.... + .+..|+
T Consensus        85 -g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~  162 (253)
T PRK05867         85 -GGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYC  162 (253)
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchH
Confidence             89999999999875 56777889999999999999999999999999998764 5799999999886543 3 457899


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      ++|+|+++|++++++|++++||+||+|+||+++|++.....   +....+....|.+++.+|+|+|++++||+++.+.++
T Consensus       163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~  239 (253)
T PRK05867        163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYM  239 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999999876532   233444556789999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      |||.|.+|||+.+
T Consensus       240 tG~~i~vdgG~~~  252 (253)
T PRK05867        240 TGSDIVIDGGYTC  252 (253)
T ss_pred             CCCeEEECCCccC
Confidence            9999999999864

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-43  Score=285.72  Aligned_cols=231  Identities=27%  Similarity=0.401  Sum_probs=201.9

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh--cCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT--KCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++|++|||||++|||                   +.+.+++..+++..  .+.++.++.+|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999                   44556666666665  3557889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||||... ..+..+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|+++
T Consensus        84 ~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         84 F-GPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             h-CCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            9 89999999999865 455567889999999999999999999999999998878999999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---CC-HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---SD-EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+|+.+|+++++.|++++||+||+|+||+++|++.....   .. +..........|.+++.+|+|+|+.++||+++.+.
T Consensus       162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~  241 (260)
T PRK07063        162 KHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAP  241 (260)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999875432   12 22333445667899999999999999999999999


Q ss_pred             CccccEEEeCCCcccccc
Q 041276          229 YITGQTICVDGGFTVNGF  246 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~~~  246 (251)
                      ++||+.|.+|||+.+..+
T Consensus       242 ~itG~~i~vdgg~~~~~~  259 (260)
T PRK07063        242 FINATCITIDGGRSVLYH  259 (260)
T ss_pred             ccCCcEEEECCCeeeecc
Confidence            999999999999887543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=6.2e-43  Score=289.99  Aligned_cols=229  Identities=23%  Similarity=0.275  Sum_probs=191.5

Q ss_pred             ccCCCCCEEEEecC--CCCcCcHHHHHHHHHHHHhcCCee------------------------------------EEEe
Q 041276           12 RWSLQGMTALVTGG--TKGLGNEAELNECLREWKTKCFKV------------------------------------TGSV   53 (251)
Q Consensus        12 ~~~l~~k~vlItGa--s~giG~~~~~~~~~~~~~~~~~~~------------------------------------~~~~   53 (251)
                      .++++||++|||||  |+|||     .++++.+.+.|.++                                    ..+.
T Consensus         4 ~~~l~gk~alITGa~~s~GIG-----~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYG-----WAIAKALAAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYP   78 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHH-----HHHHHHHHHCCCEEEEEeCcchhhHHHHhhhccccchhhhcccccccCcCeeee
Confidence            34589999999999  89999     44444444333332                                    4466


Q ss_pred             ccC--CC------------------HHHHHHHHHHHHHhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHH
Q 041276           54 CDA--SS------------------RAEREKLMKQVSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESA  112 (251)
Q Consensus        54 ~D~--~~------------------~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~  112 (251)
                      +|+  ++                  .++++++++++.+.+ +++|+||||||.... ..++.+.+.++|++++++|+.++
T Consensus        79 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~  157 (303)
T PLN02730         79 LDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSF  157 (303)
T ss_pred             cceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHH
Confidence            788  33                  448999999999999 899999999986431 36788899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCceEEEecccccccCCCCC-hhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCC
Q 041276          113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPY  190 (251)
Q Consensus       113 ~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~  190 (251)
                      +.+++.++|+|+++  |+||++||.++..+.+.+ ..|++||+|+.+|+++|+.|+++ +|||||+|+||+++|+|.+..
T Consensus       158 ~~l~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~  235 (303)
T PLN02730        158 VSLLQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI  235 (303)
T ss_pred             HHHHHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc
Confidence            99999999999764  999999999998888765 58999999999999999999986 799999999999999998653


Q ss_pred             CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccccccc
Q 041276          191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFF  248 (251)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~~~  248 (251)
                      ...++.........|+.++.+|+|+|+.++||+++.+++++|+.+.+|||+.+.+++.
T Consensus       236 ~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~  293 (303)
T PLN02730        236 GFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLAL  293 (303)
T ss_pred             cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCC
Confidence            2233434444455688899999999999999999999999999999999999998764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-42  Score=283.77  Aligned_cols=230  Identities=27%  Similarity=0.434  Sum_probs=199.8

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------c-HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------N-EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +++++++|++|||||++|||                   + ...++++.+.+...+.++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45678999999999999999                   1 223455566666556678889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC--Chh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL--GTI  148 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--~~~  148 (251)
                      +.+ +++|++|||||... ..+..+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.++..+.+.  ...
T Consensus        82 ~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  159 (254)
T PRK06114         82 AEL-GALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAH  159 (254)
T ss_pred             HHc-CCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcch
Confidence            999 89999999999875 56677889999999999999999999999999999888899999999998876653  679


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+++|+|+.+++++++.|+.++||+||.|+||+++|++.... ...+..+.+....|++++.+|+|+|+.++||+++.++
T Consensus       160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~  238 (254)
T PRK06114        160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAAS  238 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999999986531 1122334455678999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      ++|||+|.+|||+.+
T Consensus       239 ~~tG~~i~~dgg~~~  253 (254)
T PRK06114        239 FCTGVDLLVDGGFVC  253 (254)
T ss_pred             CcCCceEEECcCEec
Confidence            999999999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.3e-42  Score=283.31  Aligned_cols=237  Identities=42%  Similarity=0.577  Sum_probs=201.6

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC---FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ++.++||++||||+++|||                   +++.+++..+.+...+   .++..+.+|+++.+++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            5678999999999999999                   5566666666666543   45899999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHH-HHHHHHHHHHHHHhCCCceEEEecccccccCCCCC-h
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES-AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-T  147 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~  147 (251)
                      .+++.|++|++|||||......+..+.++++|++.+++|+.+ .+.+.+.+.++++++++|.|+++||.++..+.... .
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence            999338999999999998755578999999999999999995 66677777777888788999999999999886666 7


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHH--HhhCCCCCCCCCHHHHHHHHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEE--VKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      .|+++|+|+.+|+|++|.|++++|||||+|+||++.|++.......   +++.+.  .....|.++++.|+|+|+.+.+|
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fl  242 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFL  242 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhh
Confidence            9999999999999999999999999999999999999982222221   233333  34467899999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccccccc
Q 041276          223 CMPAASYITGQTICVDGGFTVNGFFF  248 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~~~~~  248 (251)
                      ++++++|++||.|.+|||+++....+
T Consensus       243 a~~~asyitG~~i~vdgG~~~~~~~~  268 (270)
T KOG0725|consen  243 ASDDASYITGQTIIVDGGFTVVGPSL  268 (270)
T ss_pred             cCcccccccCCEEEEeCCEEeecccc
Confidence            99987899999999999999977643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-43  Score=285.45  Aligned_cols=232  Identities=25%  Similarity=0.362  Sum_probs=202.3

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +.++++|++|||||++|||                    +.+.++...+++... +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3467899999999999999                    234445555555433 4578899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC-----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC
Q 041276           71 SLFNGKLNILINNVGTNYT-----TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  145 (251)
                      +.+ +++|++|||||....     ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+.
T Consensus        83 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         83 EDF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             Hhc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            999 899999999986531     24566788999999999999999999999999999887799999999999888889


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.+...++..+......|.+++.+|+|+|+.++||+++
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~  241 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSE  241 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence            99999999999999999999999999999999999999999776544455556666678899999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 041276          226 AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+.+++|+.+.+|||++++
T Consensus       242 ~~~~~~G~~i~vdgg~~~~  260 (260)
T PRK08416        242 KASWLTGQTIVVDGGTTFK  260 (260)
T ss_pred             hhhcccCcEEEEcCCeecC
Confidence            9999999999999998763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-42  Score=281.33  Aligned_cols=229  Identities=28%  Similarity=0.491  Sum_probs=205.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++++|++|||||++|||                   +..++.+..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999                   3455566666666656678889999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+.++|++++.++||++||..+..+.+....|+++|
T Consensus        85 -~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         85 -GPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             -CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence             89999999999865 5677889999999999999999999999999999887779999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +|++.++++++.|++++||++|+|+||+++|++.+.....+...+......|.+++.+|+|+|+.+.+|+++.++++||+
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            99999999999999999999999999999999887654445555666677899999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .|.+|||+++
T Consensus       243 ~i~~dgg~~~  252 (254)
T PRK08085        243 LLFVDGGMLV  252 (254)
T ss_pred             EEEECCCeee
Confidence            9999999865

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.4e-43  Score=284.76  Aligned_cols=226  Identities=21%  Similarity=0.275  Sum_probs=191.1

Q ss_pred             cCCCCCEEEEecCC--CCcC------------------c----HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGT--KGLG------------------N----EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        13 ~~l~~k~vlItGas--~giG------------------~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +++++|++|||||+  +|||                  +    .+.++++.+++.  +.++.++.+|++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            45789999999997  8999                  0    122333333332  35678899999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC
Q 041276           69 VSSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  145 (251)
                      +.+++ +++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+.
T Consensus        81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~  157 (257)
T PRK08594         81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN  157 (257)
T ss_pred             HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence            99999 899999999997632   245678899999999999999999999999999965  389999999999999888


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +..|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.....++..+......|.+++.+|+|+|+.++||+++
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~  237 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSD  237 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999999997643322223334445567888999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                      .++++||+.+.+|||+.+
T Consensus       238 ~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        238 LSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             ccccccceEEEECCchhc
Confidence            999999999999999764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-42  Score=283.54  Aligned_cols=227  Identities=20%  Similarity=0.236  Sum_probs=186.2

Q ss_pred             CCCCCEEEEecC--CCCcCc------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGG--TKGLGN------------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGa--s~giG~------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||  ++|||.                  ..+..+..+++.+......++.+|++|+++++++++++.+++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            468899999996  689990                  111122222232221223468999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC---CC-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           74 NGKLNILINNVGTNYTT---KP-TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                       +++|++|||||.....   .+ +.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+.+..|
T Consensus        83 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y  159 (260)
T PRK06997         83 -DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTM  159 (260)
T ss_pred             -CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchH
Confidence             8999999999986421   12 346788999999999999999999999999953  3899999999998888889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+.+|+++++.|++++||+||.|+||+++|++.......++..+......|++++.+|+|||+.+.||+++.+.+
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  239 (260)
T PRK06997        160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASG  239 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999976543222333344455678999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +||+.|.+|||++.
T Consensus       240 itG~~i~vdgg~~~  253 (260)
T PRK06997        240 VTGEITHVDSGFNA  253 (260)
T ss_pred             cceeEEEEcCChhh
Confidence            99999999999753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.9e-42  Score=280.60  Aligned_cols=230  Identities=30%  Similarity=0.459  Sum_probs=198.7

Q ss_pred             ccCCCCCEEEEecCCCCcCc-----------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           12 RWSLQGMTALVTGGTKGLGN-----------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~-----------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+++++|++|||||++|||.                 .....+..+++...+.++.++.+|++|.++++++++++.+++ 
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   83 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-   83 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            34688999999999999991                 111223333444334567788999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++++ .|+||++||..+..+.+....|+++|
T Consensus        84 ~~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (253)
T PRK08993         84 GHIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASK  162 (253)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHH
Confidence            89999999999865 56677889999999999999999999999999998764 58999999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +|+++++++++.|+.++||+||.|+||+++|++.......++....+.+..|.+++.+|+|+|+.+.+|+++.+++++|+
T Consensus       163 aa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~  242 (253)
T PRK08993        163 SGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGY  242 (253)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            99999999999999999999999999999999987654444444455667899999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+|||+.+
T Consensus       243 ~~~~dgg~~~  252 (253)
T PRK08993        243 TIAVDGGWLA  252 (253)
T ss_pred             EEEECCCEec
Confidence            9999999765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-42  Score=281.21  Aligned_cols=229  Identities=17%  Similarity=0.277  Sum_probs=190.3

Q ss_pred             CCCCEEEEecCCC--CcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTK--GLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~--giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++|++|||||++  |||                  +...+++..+++......+.++.+|++|+++++++++++.+.+ 
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW-   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc-
Confidence            6789999999986  899                  1122334445554444456778999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           75 GKLNILINNVGTNYTT----KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +++|++|||||+....    ..+.+.+.++|++.+++|+.+++.+++.+.|.|++  .|+||++||.++..+.+.+..|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhH
Confidence            8999999999976421    12456789999999999999999999999987653  38999999999988888899999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++.+.++
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~i  240 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI  240 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccc
Confidence            99999999999999999999999999999999998754332222333444556789999999999999999999999999


Q ss_pred             cccEEEeCCCcccccc
Q 041276          231 TGQTICVDGGFTVNGF  246 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~  246 (251)
                      +|+.|.+|||+.+..+
T Consensus       241 tG~~i~vdgg~~~~~~  256 (262)
T PRK07984        241 SGEVVHVDGGFSIAAM  256 (262)
T ss_pred             cCcEEEECCCcccccc
Confidence            9999999999775443

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.6e-42  Score=281.75  Aligned_cols=228  Identities=32%  Similarity=0.537  Sum_probs=198.1

Q ss_pred             CCCCCEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           14 SLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        14 ~l~~k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .+++|++|||||++|||                  +.+.+++..+++.+.+.++.++.+|++++++++++++++.+.+ +
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-G   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-C
Confidence            46899999999999999                  2255566666676666678899999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||......++.+.+.+.|++++++|+.+++.+++.++|+|++++ |+||++||.++..+.+....|++||+|
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGA  160 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHH
Confidence            9999999999875345677889999999999999999999999999998775 899999999999988889999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-H-H----HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-E-K----FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-~-~----~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++.|+++++.|++++||+||+|+||+++|++.+..... + .    +........|.+++.+|+|+|+.+++|+++.+.+
T Consensus       161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  240 (272)
T PRK08589        161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF  240 (272)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999999987654322 1 1    1122233568889999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      ++|+.|.+|||...
T Consensus       241 ~~G~~i~vdgg~~~  254 (272)
T PRK08589        241 ITGETIRIDGGVMA  254 (272)
T ss_pred             cCCCEEEECCCccc
Confidence            99999999999764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-42  Score=283.04  Aligned_cols=228  Identities=19%  Similarity=0.264  Sum_probs=188.7

Q ss_pred             CCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||+  +|||                  +.+...+..+++.+.......+.+|++|+++++++++++.+.+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            4578999999997  8999                  1122222333333221235578999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+.+..|+
T Consensus        87 -g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~  163 (272)
T PRK08159         87 -GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMG  163 (272)
T ss_pred             -CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhh
Confidence             899999999998642   246678899999999999999999999999999964  38999999999988889999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++.......+..........|.+++.+|+|+|+.++||+++.+.++
T Consensus       164 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~i  243 (272)
T PRK08159        164 VAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGV  243 (272)
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999998765432212222222346788999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      ||+.|.+|||+.+.
T Consensus       244 tG~~i~vdgG~~~~  257 (272)
T PRK08159        244 TGEVHHVDSGYHVV  257 (272)
T ss_pred             cceEEEECCCceee
Confidence            99999999998754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=278.41  Aligned_cols=231  Identities=35%  Similarity=0.538  Sum_probs=202.4

Q ss_pred             ccCCCCCEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           12 RWSLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..++++|+||||||++|||                  .....+++.+.+...+.++.++.+|+++.++++++++++.+.+
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3468899999999999999                  1133344444554445678899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+.+..|+++|
T Consensus        90 -g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (258)
T PRK06935         90 -GKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASK  167 (258)
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHH
Confidence             89999999999875 5677788999999999999999999999999999988889999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +|++++++++++|+.++||+||.|+||+++|++.+.....+...+......|.+++.+|+|+|+.+.||+++.+++++|+
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  247 (258)
T PRK06935        168 HGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGH  247 (258)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCC
Confidence            99999999999999999999999999999999876554444444455567889999999999999999999999999999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      +|.+|||+.++
T Consensus       248 ~i~~dgg~~~~  258 (258)
T PRK06935        248 ILAVDGGWLVR  258 (258)
T ss_pred             EEEECCCeecC
Confidence            99999998764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=7.7e-42  Score=266.00  Aligned_cols=209  Identities=24%  Similarity=0.346  Sum_probs=183.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|+++|||||||||                   +.++|+++..++.+  ..+.++.+|++|.++++++++.+.++|
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            456789999999999999                   66778888888765  578999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|+.++++|+.+.++.+++++|.|.+++.|.||++||++|..++++...|+++|
T Consensus        80 -g~iDiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK  157 (246)
T COG4221          80 -GRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATK  157 (246)
T ss_pred             -CcccEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhH
Confidence             89999999999988 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +++..|.+.|++|+..++|||..|.||.+.|..+......  .+..+...   ......+|+|||+++.|..+...+
T Consensus       158 ~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y---~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         158 AAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY---KGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             HHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh---ccCCCCCHHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999988766554432  22222221   223456899999999999986544

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.7e-41  Score=277.62  Aligned_cols=225  Identities=30%  Similarity=0.426  Sum_probs=197.4

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      .++++|++|||||++|||     .++++.+.+.|.+             +.++.+|++++++++++++++.+.+ +++|+
T Consensus         2 ~~l~gk~vlItGas~gIG-----~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~   75 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIG-----KAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKY-GRIDI   75 (258)
T ss_pred             CCCCCCEEEEECCCchHH-----HHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            457899999999999999     8888888776543             4567899999999999999999999 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+.+..|++||+|++++
T Consensus        76 li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~  154 (258)
T PRK06398         76 LVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGL  154 (258)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHH
Confidence            999999865 6778889999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-----CHH----HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLS-----DEK----FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +++++.|+.+. |+||+|+||+++|++......     .++    ....+....|.+++.+|+|+|+.++||+++.+.++
T Consensus       155 ~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~  233 (258)
T PRK06398        155 TRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFI  233 (258)
T ss_pred             HHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCC
Confidence            99999999875 999999999999998754311     111    11223445788899999999999999999999999


Q ss_pred             cccEEEeCCCccccc
Q 041276          231 TGQTICVDGGFTVNG  245 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~  245 (251)
                      +|+.+.+|||+....
T Consensus       234 ~G~~i~~dgg~~~~~  248 (258)
T PRK06398        234 TGECVTVDGGLRALI  248 (258)
T ss_pred             CCcEEEECCccccCC
Confidence            999999999987654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-41  Score=279.25  Aligned_cols=234  Identities=28%  Similarity=0.409  Sum_probs=203.4

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +..+++++|+++||||++|||                   +.+.++++.+++...+.++.++.+|+++++++..+++++.
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQIL   82 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            445578899999999999999                   3445556666666656678899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--------------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecc
Q 041276           71 SLFNGKLNILINNVGTNYTT--------------KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSS  136 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss  136 (251)
                      +.+ +++|++|||||...+.              .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||
T Consensus        83 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         83 EDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HHc-CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            999 8999999999965422              2466788999999999999999999999999999888899999999


Q ss_pred             cccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-----HHHHHHHhhCCCCCCCCC
Q 041276          137 VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-----EKFLEEVKCRTPMERPGE  211 (251)
Q Consensus       137 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  211 (251)
                      .++..+.+....|++||+|++.++++++.|++++||+||.|+||+++|++.+.+...     .+..+......|.+++.+
T Consensus       162 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  241 (278)
T PRK08277        162 MNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGK  241 (278)
T ss_pred             chhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCC
Confidence            999999999999999999999999999999999999999999999999986543221     233445556789999999


Q ss_pred             HHHHHHHHHHHcCC-CCCCccccEEEeCCCcccc
Q 041276          212 PKEVSSLVAFLCMP-AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       212 ~~dva~~~~~l~~~-~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+|+|++++||+++ .+.++||+.|.+|||+++.
T Consensus       242 ~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        242 PEELLGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             HHHHHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            99999999999999 8999999999999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-41  Score=278.22  Aligned_cols=230  Identities=27%  Similarity=0.401  Sum_probs=198.1

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++|++|||||++|||                   +.+++++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999                   344555555565544  24678899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|++
T Consensus        84 ~~-g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         84 RF-GGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             hc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            99 89999999999865 56778899999999999999999999999999999887899999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--------CHHHHHHH--hhCCCCCCCCCHHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--------DEKFLEEV--KCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~dva~~~~~  221 (251)
                      +|+|+.+|+++++.|+.++||+||+|+||+++|++......        .++..+.+  ....|.+++.+|+|+|+.+++
T Consensus       162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~  241 (265)
T PRK07062        162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFF  241 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998643211        11111111  245788999999999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+++.+.++|||.|.+|||+..+
T Consensus       242 L~s~~~~~~tG~~i~vdgg~~~~  264 (265)
T PRK07062        242 LASPLSSYTTGSHIDVSGGFARH  264 (265)
T ss_pred             HhCchhcccccceEEEcCceEee
Confidence            99999999999999999997653

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=5.2e-41  Score=279.54  Aligned_cols=227  Identities=27%  Similarity=0.331  Sum_probs=196.4

Q ss_pred             CCCCCEEEEecCCCCcC---------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG---------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++|++|||||++|||                     +.+.++++.+.+...+.++.++.+|+++.+++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999                     122334444445455667888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|++.  ++||++||.++..+.+....|+++
T Consensus       126 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 L-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             h-CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEECCchhccCCCCcchhHHH
Confidence            9 8999999999975434567788999999999999999999999999999753  899999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+++++++++.|++++||+||+|+||+++|++.......++....+....|.+++.+|+|+|++++||+++.+.+++|
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG  282 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTA  282 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccc
Confidence            99999999999999999999999999999999986432223344455666789999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.|.+|||+.+
T Consensus       283 ~~i~vdgG~~~  293 (294)
T PRK07985        283 EVHGVCGGEHL  293 (294)
T ss_pred             cEEeeCCCeeC
Confidence            99999999764

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-41  Score=272.78  Aligned_cols=230  Identities=27%  Similarity=0.429  Sum_probs=205.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++++|++|||||++|||                   +.+.++.+.+++.+.+.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578899999999999999                   345566666666666667888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++||++|......++.+.+.+++++.+++|+.+++.++++++|+|++++.++|+++||..+..+.+++..|++|
T Consensus        83 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         83 H-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             c-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence            9 899999999997643456778899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.|+.++||+|++|+||+++|++.......+..........|.++..+|+|+|+.+++|+++.+.+++|
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  241 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTG  241 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999998776555555666667788999999999999999999999999999


Q ss_pred             cEEEeCCCcc
Q 041276          233 QTICVDGGFT  242 (251)
Q Consensus       233 ~~i~vdgG~~  242 (251)
                      +.+.+|||+.
T Consensus       242 ~~~~~dgg~~  251 (252)
T PRK07035        242 ECLNVDGGYL  251 (252)
T ss_pred             CEEEeCCCcC
Confidence            9999999974

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-41  Score=273.34  Aligned_cols=230  Identities=31%  Similarity=0.457  Sum_probs=204.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.+++|+++||||++|||                   +.+.++...+.+.+.+.++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999                   3444555556666556678899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|......++.+.+.+++++.+++|+.+++.+++.++|+|++++.+++|++||..+..+.+.+..|+++|
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 -GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence             8999999999987544557788999999999999999999999999999888779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      +|++.|+++++.|+.++||+|++|+||+++|++.+.... .++..+.+..+.|.++..+|+|+++.++||+++.+.+++|
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G  241 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTG  241 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCC
Confidence            999999999999999999999999999999999876543 4555666667788899999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.|.+|||+++
T Consensus       242 ~~i~~dgg~~~  252 (253)
T PRK06172        242 HALMVDGGATA  252 (253)
T ss_pred             cEEEECCCccC
Confidence            99999999865

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-41  Score=279.38  Aligned_cols=228  Identities=23%  Similarity=0.269  Sum_probs=193.6

Q ss_pred             ccCCCCCEEEEecCC--CCcCcHHHHHHHHHHHHhcCCeeEEE-------------------------------------
Q 041276           12 RWSLQGMTALVTGGT--KGLGNEAELNECLREWKTKCFKVTGS-------------------------------------   52 (251)
Q Consensus        12 ~~~l~~k~vlItGas--~giG~~~~~~~~~~~~~~~~~~~~~~-------------------------------------   52 (251)
                      +.+++||++||||++  +|||     .+.+..+.++|.++.+.                                     
T Consensus         3 ~~~~~gk~alITGa~~~~GIG-----~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   77 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYG-----WGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYP   77 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHH-----HHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHH
Confidence            456789999999995  9999     78888888777766552                                     


Q ss_pred             -eccCCCHH------------------HHHHHHHHHHHhcCCCccEEEEcccCCC-CCCCCCCCCHHHHHHHHHhhhHHH
Q 041276           53 -VCDASSRA------------------EREKLMKQVSSLFNGKLNILINNVGTNY-TTKPTVEYMAEDLSFLMSTNFESA  112 (251)
Q Consensus        53 -~~D~~~~~------------------~~~~~~~~i~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~  112 (251)
                       .+|+++++                  +++++++++.+++ +++|+||||||... ...++.+.+.++|++.+++|+.++
T Consensus        78 ~~~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~  156 (299)
T PRK06300         78 MDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSF  156 (299)
T ss_pred             hhhhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHH
Confidence             13444443                  5899999999999 89999999998753 246788999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCceEEEecccccccCCCCCh-hhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCC
Q 041276          113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT-IYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPY  190 (251)
Q Consensus       113 ~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~  190 (251)
                      +.++++++|+|+++  |+||+++|..+..+.+.+. .|++||+|+.+|+++++.|+++ +|||||+|+||+++|++....
T Consensus       157 ~~l~~a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~  234 (299)
T PRK06300        157 VSLLSHFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI  234 (299)
T ss_pred             HHHHHHHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc
Confidence            99999999999764  7999999999988888765 8999999999999999999987 599999999999999987543


Q ss_pred             CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccccc
Q 041276          191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      ...++..+......|.++..+|+|+|+.++||+++.+.++||+.+.+|||+.+.++-
T Consensus       235 ~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  291 (299)
T PRK06300        235 GFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIG  291 (299)
T ss_pred             cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCC
Confidence            223344445556678899999999999999999999999999999999999887653

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.7e-41  Score=279.10  Aligned_cols=227  Identities=30%  Similarity=0.412  Sum_probs=198.5

Q ss_pred             CCCCCEEEEecCCCCcC---------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG---------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++|++|||||++|||                     +....++..+.+...+.++.++.+|+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            57889999999999999                     112334455555555667888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|++  .++||++||..++.+.+....|++|
T Consensus       132 ~-g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 L-GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             h-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence            9 899999999998654567788999999999999999999999999999975  3799999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|++.|+++++.|+.++||+||+|+||+++|++.......++....+....|.+++..|+|+|..+++|+++.+.+++|
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G  288 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTG  288 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999999999999999999987543223455555666789999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.|.+|||+.+
T Consensus       289 ~~~~v~gg~~~  299 (300)
T PRK06128        289 EVFGVTGGLLL  299 (300)
T ss_pred             cEEeeCCCEeC
Confidence            99999999865

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=272.36  Aligned_cols=231  Identities=30%  Similarity=0.519  Sum_probs=206.2

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++++|++|||||++|||                   +..++++..+.++..+.++.++.+|+++.++++++++++.+.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3468899999999999999                   344555566666655667888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+.++|++++.|+||++||..+..+.+.+..|+++
T Consensus        85 ~-~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s  162 (255)
T PRK07523         85 I-GPIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTAT  162 (255)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHH
Confidence            8 89999999999876 667888999999999999999999999999999998878999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.|++++||+||.|+||+++|++.+.....+.....+....|.+++..|+|+|+.+++|+++.+.++||
T Consensus       163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  242 (255)
T PRK07523        163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNG  242 (255)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence            99999999999999999999999999999999987665444555566677789999999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                      +.|.+|||+.++
T Consensus       243 ~~i~~~gg~~~~  254 (255)
T PRK07523        243 HVLYVDGGITAS  254 (255)
T ss_pred             cEEEECCCeecc
Confidence            999999998754

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-41  Score=275.16  Aligned_cols=225  Identities=20%  Similarity=0.176  Sum_probs=185.9

Q ss_pred             CCCCCEEEEecC--CCCcCc---------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGG--TKGLGN---------------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        14 ~l~~k~vlItGa--s~giG~---------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ++++|+++||||  ++|||.                     .+.++++.+++   +.++.++.+|++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            467899999999  899991                     11122222222   2356788999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           71 SLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      +.+ +++|++|||||+....   .++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++++.. ..+.+.+.
T Consensus        81 ~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         81 EHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccc
Confidence            998 8999999999986421   35667889999999999999999999999999974  38999998753 45567788


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC-CCCCHHHHHHHHHHHcCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~  226 (251)
                      .|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.....++..+.+....|.+ ++.+|+|+|+.+++|+++.
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcc
Confidence            899999999999999999999999999999999999998765533333344445567887 5899999999999999999


Q ss_pred             CCCccccEEEeCCCccccc
Q 041276          227 ASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~~~  245 (251)
                      +.+++|+.+.+|||+.+.+
T Consensus       237 ~~~~tG~~i~vdgg~~~~~  255 (256)
T PRK07889        237 FPATTGEIVHVDGGAHAMG  255 (256)
T ss_pred             cccccceEEEEcCceeccC
Confidence            9999999999999987653

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-40  Score=271.57  Aligned_cols=226  Identities=28%  Similarity=0.369  Sum_probs=191.0

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh--
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL--   72 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~--   72 (251)
                      +++|++|||||++|||                    +.+.+++...++...+.++..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            3689999999999999                    234444555556555566778889999999999999988753  


Q ss_pred             --cC-CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           73 --FN-GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        73 --~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                        ++ +++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++.  |+||++||.++..+.+....|
T Consensus        82 ~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y  158 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAY  158 (252)
T ss_pred             hhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCchhH
Confidence              31 38999999999864 5667888999999999999999999999999999764  899999999999999899999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+++++++++.|++++||+||+|+||+++|++.......+..........|.+++.+|+|+|+.+.||+++.+.+
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  238 (252)
T PRK12747        159 SMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW  238 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999999997655444332222223347788999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      ++|+.+.+|||..+
T Consensus       239 ~~G~~i~vdgg~~~  252 (252)
T PRK12747        239 VTGQLIDVSGGSCL  252 (252)
T ss_pred             cCCcEEEecCCccC
Confidence            99999999999753

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.1e-40  Score=270.97  Aligned_cols=234  Identities=46%  Similarity=0.770  Sum_probs=209.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .++++++|+++||||++|||                   +.+.+++..+++...  +.++.++.+|+++.++++++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999                   344555566666544  457888999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+ +++|++||++|... ..+..+.+.++|++.+++|+.+++.++++++|+|++++.++||++||.++..+.+....|
T Consensus        83 ~~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y  160 (257)
T PRK09242         83 EDHW-DGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPY  160 (257)
T ss_pred             HHHc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcch
Confidence            9999 89999999999865 566778899999999999999999999999999998878999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +++|+++..++++++.|+.++||+++.|+||+++|++.+.....++..+.+..+.|.+++.+|+|+++.+.+|+++...+
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  240 (257)
T PRK09242        161 GMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY  240 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccc
Confidence            99999999999999999999999999999999999998877666666777777788899999999999999999988889


Q ss_pred             ccccEEEeCCCcccccc
Q 041276          230 ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~  246 (251)
                      ++|+.|.+|||....++
T Consensus       241 ~~g~~i~~~gg~~~~~~  257 (257)
T PRK09242        241 ITGQCIAVDGGFLRYGF  257 (257)
T ss_pred             ccCCEEEECCCeEeecC
Confidence            99999999999887764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.7e-40  Score=269.97  Aligned_cols=228  Identities=30%  Similarity=0.453  Sum_probs=196.0

Q ss_pred             CCCCCEEEEecCCCCcC-----------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           14 SLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ++++|++|||||++|||                 ......+..+.+...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF-GH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            57899999999999999                 1111223333344444567889999999999999999999988 79


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ .|+||++||.++..+.+....|+++|++
T Consensus        81 ~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  159 (248)
T TIGR01832        81 IDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHG  159 (248)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHH
Confidence            999999999876 55677889999999999999999999999999998765 6899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      +..++++++.|+.++||+||+|+||++.|++.+.....+........+.|.+++.+|+|+|+++++|+++.+.+++|+.+
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  239 (248)
T TIGR01832       160 VAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTL  239 (248)
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEE
Confidence            99999999999999999999999999999987655443333344556788899999999999999999999999999999


Q ss_pred             EeCCCccc
Q 041276          236 CVDGGFTV  243 (251)
Q Consensus       236 ~vdgG~~~  243 (251)
                      .+|||+.+
T Consensus       240 ~~dgg~~~  247 (248)
T TIGR01832       240 AVDGGWLA  247 (248)
T ss_pred             EeCCCEec
Confidence            99999764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=275.90  Aligned_cols=223  Identities=22%  Similarity=0.305  Sum_probs=191.6

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cH---------HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NE---------AELNECLREWKTKCFKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   65 (251)
                      .+++|++|||||++|||                   +.         +.++++.+++...+.++.++.+|++|.++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            46789999999999999                   11         445566666766667788999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC------CceEEEeccccc
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG------AGNIILVSSVCG  139 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~------~g~iv~vss~~~  139 (251)
                      ++++.+.+ +++|++|||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|+|+++.      .|+||++||.++
T Consensus        83 ~~~~~~~~-g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETF-GGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999 89999999999876 56778899999999999999999999999999998642      379999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC--CCCCHHHHHH
Q 041276          140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME--RPGEPKEVSS  217 (251)
Q Consensus       140 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~  217 (251)
                      ..+.+++..|++||+|+.+|+++++.|++++||+||+|+|| +.|++....      ........+.+  +..+|+|+|+
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~------~~~~~~~~~~~~~~~~~pedva~  233 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV------FAEMMAKPEEGEFDAMAPENVSP  233 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh------HHHHHhcCcccccCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999 788876432      11122222333  3568999999


Q ss_pred             HHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          218 LVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      .++||+++.+.++||+.|.+|||.....
T Consensus       234 ~~~~L~s~~~~~itG~~i~vdgG~~~~~  261 (286)
T PRK07791        234 LVVWLGSAESRDVTGKVFEVEGGKISVA  261 (286)
T ss_pred             HHHHHhCchhcCCCCcEEEEcCCceEEe
Confidence            9999999999999999999999988753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=273.19  Aligned_cols=229  Identities=28%  Similarity=0.389  Sum_probs=190.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.+++|++|||||++|||                   +.+.++++.+++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            346889999999999999                   222222222222   2356788999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHH----HHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAED----LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                       +++|++|||||+.....++.+.+.++    |++.+++|+.+++.+++.++|.|++++ |+||+++|.++..+.++...|
T Consensus        79 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y  156 (263)
T PRK06200         79 -GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLY  156 (263)
T ss_pred             -CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCCCCchh
Confidence             89999999999864334555566554    899999999999999999999998764 899999999999988888999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      ++||+|++.|+++++.|+++. |+||+|+||+++|++.....         ..++..+......|++++.+|+|+|+.++
T Consensus       157 ~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~  235 (263)
T PRK06200        157 TASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYV  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhh
Confidence            999999999999999999884 99999999999999864211         11223445566789999999999999999


Q ss_pred             HHcCCC-CCCccccEEEeCCCccccccc
Q 041276          221 FLCMPA-ASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       221 ~l~~~~-~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      ||+++. +.++||+.|.+|||+.+.+++
T Consensus       236 fl~s~~~~~~itG~~i~vdgG~~~~~~~  263 (263)
T PRK06200        236 LLASRRNSRALTGVVINADGGLGIRGIR  263 (263)
T ss_pred             heecccccCcccceEEEEcCceeecccC
Confidence            999998 999999999999999888753

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-40  Score=269.83  Aligned_cols=227  Identities=30%  Similarity=0.430  Sum_probs=191.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999                   222222222222   3467889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||||... ... .+.+.++|++.+++|+.+++.+++.++|+|+ ++.|+||++||.++..+.+.+..|+++|
T Consensus        79 -g~id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asK  154 (261)
T PRK08265         79 -GRVDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASK  154 (261)
T ss_pred             -CCCCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHH
Confidence             89999999999764 332 3678899999999999999999999999998 5569999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-HHHHHHHh-hCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVK-CRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +++..++++++.|++++||+||+|+||+++|++....... ....+.+. ...|.+++.+|+|+|++++||+++.+.++|
T Consensus       155 aa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~t  234 (261)
T PRK08265        155 AAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVT  234 (261)
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999999987654322 22222222 346888999999999999999999999999


Q ss_pred             ccEEEeCCCcccccc
Q 041276          232 GQTICVDGGFTVNGF  246 (251)
Q Consensus       232 G~~i~vdgG~~~~~~  246 (251)
                      ||.|.+|||+++.+.
T Consensus       235 G~~i~vdgg~~~~~~  249 (261)
T PRK08265        235 GADYAVDGGYSALGP  249 (261)
T ss_pred             CcEEEECCCeeccCC
Confidence            999999999887654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-40  Score=269.83  Aligned_cols=224  Identities=29%  Similarity=0.323  Sum_probs=191.0

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +++|||||++|||                   +.+.+++..+++.+.+ ++.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4799999999999                   3455555666665443 67889999999999999999999998 8999


Q ss_pred             EEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-CCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           79 ILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        79 ~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +||||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+ ++.|+||++||.++..+.+....|+++|+|+
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~  158 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL  158 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence            99999997531 335667889999999999999999999999999874 4568999999999998888899999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHH-HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEK-FLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      .+|+++++.|++++||+||+|+||+++|++.+...         ..++ ....+..+.|++++.+|+|||+++.||+++.
T Consensus       159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999864211         1112 2234456789999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 041276          227 ASYITGQTICVDGGFTV  243 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~  243 (251)
                      ++++||++|.+|||+.+
T Consensus       239 ~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        239 AEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccccCceEeecCCcCC
Confidence            99999999999999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=267.46  Aligned_cols=232  Identities=33%  Similarity=0.498  Sum_probs=202.6

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++|||||++|||                    +...+....+++...+.++.++.+|+++.++++++++.+.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999                    2233444555565556678889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|++|||+|... ..++.+.+.+.|++.+++|+.+++.+++.++++|++++ .|+||++||..+..+.+.+..|+++
T Consensus        84 -g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  161 (261)
T PRK08936         84 -GTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAAS  161 (261)
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHH
Confidence             89999999999866 56677889999999999999999999999999998765 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+..++++++.|+.++||+|+.|+||+++|++.......++.........|.+++.+|+|+++.+.||+++.+.+++|
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  241 (261)
T PRK08936        162 KGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccC
Confidence            99999999999999999999999999999999987654444444555556788899999999999999999999999999


Q ss_pred             cEEEeCCCccccccc
Q 041276          233 QTICVDGGFTVNGFF  247 (251)
Q Consensus       233 ~~i~vdgG~~~~~~~  247 (251)
                      +.|.+|||+.+.-++
T Consensus       242 ~~i~~d~g~~~~~~~  256 (261)
T PRK08936        242 ITLFADGGMTLYPSF  256 (261)
T ss_pred             cEEEECCCcccCccc
Confidence            999999998865543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.2e-41  Score=274.26  Aligned_cols=208  Identities=40%  Similarity=0.579  Sum_probs=185.8

Q ss_pred             cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHH
Q 041276           31 NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMS  106 (251)
Q Consensus        31 ~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~  106 (251)
                      +.++++...+++.+. +.+  ++.+|++++++++++++++.+.+++++|++|||+|...+   ..++.+.+.++|++.++
T Consensus        29 ~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~  106 (241)
T PF13561_consen   29 NEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFD  106 (241)
T ss_dssp             SHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHH
Confidence            444444555555543 333  599999999999999999999985699999999998763   36788899999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCC
Q 041276          107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTP  185 (251)
Q Consensus       107 ~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~  185 (251)
                      +|+++++.+++++.|+|+++  |+||++||.++..+.+.+..|+++|+|+++|+|++|.|+++ +|||||+|+||+++|+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~  184 (241)
T PF13561_consen  107 INVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP  184 (241)
T ss_dssp             HHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred             HHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence            99999999999999988876  89999999999999999999999999999999999999999 9999999999999999


Q ss_pred             CCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcc
Q 041276          186 LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      +.+.....++..+...+..|++++.+|+|||++++||+++.++++|||+|.||||++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  185 MTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             HHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTTGG
T ss_pred             chhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECCCcC
Confidence            876554557788888899999999999999999999999999999999999999985

...

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-39  Score=266.39  Aligned_cols=223  Identities=33%  Similarity=0.496  Sum_probs=192.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+++|+++||||++|||     .++++.+.+.|.                   .+.++.+|++++++++++++++.+.+ 
T Consensus         4 ~l~~k~~lItGas~gIG-----~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   77 (255)
T PRK06463          4 RFKGKVALITGGTRGIG-----RAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEF-   77 (255)
T ss_pred             CcCCCEEEEeCCCChHH-----HHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHc-
Confidence            46789999999999999     445544444332                   24577899999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~Y~~sK  153 (251)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++.. +.++...|++||
T Consensus        78 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  156 (255)
T PRK06463         78 GRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITK  156 (255)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence            89999999999865 5677788999999999999999999999999999987789999999998875 345678899999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +|+++|+++++.|+.++||+||.|+||+++|++.......   +...+.+..+.|.+++.+|+|+|+.+++|+++.+.++
T Consensus       157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  236 (255)
T PRK06463        157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYI  236 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCC
Confidence            9999999999999999999999999999999987543222   2344455667888999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      ||+.+.+|||..-
T Consensus       237 ~G~~~~~dgg~~~  249 (255)
T PRK06463        237 TGQVIVADGGRID  249 (255)
T ss_pred             CCCEEEECCCeee
Confidence            9999999999753

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-39  Score=265.04  Aligned_cols=222  Identities=29%  Similarity=0.341  Sum_probs=194.9

Q ss_pred             cCCCCCEEEEecCC--CCcCc------------------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           13 WSLQGMTALVTGGT--KGLGN------------------------------EAELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        13 ~~l~~k~vlItGas--~giG~------------------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      .++++|++|||||+  +|||.                              ...+.++.+++.+.+.++.++++|+++.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46889999999999  49991                              11223344555555678889999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc
Q 041276           61 EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV  140 (251)
Q Consensus        61 ~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~  140 (251)
                      +++++++++.+.+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++.
T Consensus        82 ~i~~~~~~~~~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  159 (256)
T PRK12859         82 APKELLNKVTEQL-GYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHHc-CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence            9999999999998 89999999999865 567889999999999999999999999999999998878999999999999


Q ss_pred             cCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          141 LSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       141 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      .+.+++..|+++|+++..|+++++.++.++||+|+.|+||+++|++..     +...+......|.++..+|+|+|+.+.
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~  234 (256)
T PRK12859        160 GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPFGRIGEPKDAARLIK  234 (256)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999643     233444555678888899999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCc
Q 041276          221 FLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      +|+++.+.++||+.|.+|||+
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        235 FLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHhCccccCccCcEEEeCCCc
Confidence            999999999999999999996

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=265.45  Aligned_cols=226  Identities=26%  Similarity=0.400  Sum_probs=199.3

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC----------------CeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC----------------FKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +++++|++|||||++|||     .++++.+.+.+                .++.++.+|++++++++++++.+.+.+ ++
T Consensus         2 ~~~~~k~~lItGas~gIG-----~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   75 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIG-----AGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERH-GR   75 (252)
T ss_pred             CCCCCCEEEEeCCCchHH-----HHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            457899999999999999     66666665433                246678999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhHHhHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +|++|||||... ..+..+.+.+.|++.+++|+.+++.+++.+.|+|.++ +.|+||++||..+..+.+.+..|+++|++
T Consensus        76 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  154 (252)
T PRK07856         76 LDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAG  154 (252)
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHH
Confidence            999999999865 5667788999999999999999999999999999875 45899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.|+++++.|++++ |++|.|+||+++|++.......++....+....|.++..+|+|+|+.+++|+++.+.++||+.|
T Consensus       155 ~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i  233 (252)
T PRK07856        155 LLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANL  233 (252)
T ss_pred             HHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEE
Confidence            999999999999987 9999999999999987654445555555666788899999999999999999999999999999


Q ss_pred             EeCCCcccccc
Q 041276          236 CVDGGFTVNGF  246 (251)
Q Consensus       236 ~vdgG~~~~~~  246 (251)
                      .+|||....++
T Consensus       234 ~vdgg~~~~~~  244 (252)
T PRK07856        234 EVHGGGERPAF  244 (252)
T ss_pred             EECCCcchHHH
Confidence            99999887654

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-39  Score=263.96  Aligned_cols=230  Identities=29%  Similarity=0.463  Sum_probs=202.1

Q ss_pred             CCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           17 GMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        17 ~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +|++|||||++|||                    +.+.++.+.+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            58999999999999                    2334445555666566678899999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.++|.+++ .|+||++||..+..+.++...|+++|++
T Consensus        81 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  159 (256)
T PRK12743         81 IDVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA  159 (256)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence            999999999876 55677889999999999999999999999999997653 5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      +..++++++.++.++||+++.|+||+++|++....  .++.........|.++..+|+|+|+.+.+|+++.+.+++|+.+
T Consensus       160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  237 (256)
T PRK12743        160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSL  237 (256)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEE
Confidence            99999999999999999999999999999987543  2333444556678889999999999999999999999999999


Q ss_pred             EeCCCcccccccccc
Q 041276          236 CVDGGFTVNGFFFRR  250 (251)
Q Consensus       236 ~vdgG~~~~~~~~~~  250 (251)
                      .+|||..+..++|+.
T Consensus       238 ~~dgg~~~~~~~~~~  252 (256)
T PRK12743        238 IVDGGFMLANPQFNS  252 (256)
T ss_pred             EECCCccccCCcccc
Confidence            999999999898873

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-40  Score=269.11  Aligned_cols=226  Identities=30%  Similarity=0.402  Sum_probs=193.7

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe---------------eEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK---------------VTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~---------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      .+++++|++|||||++|||     .++++.+.+.|.+               +.++.+|++++++++++++++.+.+ ++
T Consensus         4 ~~~l~~k~vlItG~s~gIG-----~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   77 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIG-----LAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKF-GR   77 (266)
T ss_pred             cccCCCCEEEEeCCCChHH-----HHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            3468899999999999999     7777777665433               4567899999999999999999999 89


Q ss_pred             ccEEEEcccCCCCC--------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           77 LNILINNVGTNYTT--------KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        77 id~lv~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      +|++|||||...+.        .+..+.+.++|++.+++|+.+++.+++++.++|++++.|+||++||.++..+.+....
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSC  157 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCch
Confidence            99999999975421        1234678999999999999999999999999999888899999999999999888999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCccc-CCCCCCCC----------CCHHHHHHHhh--CCCCCCCCCHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFIT-TPLTEPYL----------SDEKFLEEVKC--RTPMERPGEPKEV  215 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~-t~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~dv  215 (251)
                      |+++|+++++|+++++.|++++||+||.|+||+++ |++.....          ..++..+.+..  ..|++++.+|+||
T Consensus       158 Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ev  237 (266)
T PRK06171        158 YAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEV  237 (266)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHh
Confidence            99999999999999999999999999999999997 66643211          11233344444  6799999999999


Q ss_pred             HHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          216 SSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       216 a~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      |+++.||+++.++++||+.|.+|||+..
T Consensus       238 a~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        238 ADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             hhheeeeeccccccceeeEEEecCcccC
Confidence            9999999999999999999999999764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-39  Score=262.73  Aligned_cols=227  Identities=29%  Similarity=0.454  Sum_probs=198.0

Q ss_pred             ccCCCCCEEEEecCCC-CcC-------------------cHHHHHHHHHHHHhc-C-CeeEEEeccCCCHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTK-GLG-------------------NEAELNECLREWKTK-C-FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        12 ~~~l~~k~vlItGas~-giG-------------------~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ...+++|++|||||++ |||                   +.+++++..++++.. + .++.++.+|++++++++++++++
T Consensus        12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3456789999999985 999                   334455555555542 3 36888999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~  148 (251)
                      .+.+ +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ .|+||+++|..+..+.+.+..
T Consensus        92 ~~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~  169 (262)
T PRK07831         92 VERL-GRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAH  169 (262)
T ss_pred             HHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcc
Confidence            9998 89999999999865 56778889999999999999999999999999998876 789999999999988889999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+++|+|+++++++++.|++++||+||.|+||+++|++..... .++..+.+....|.+++.+|+|+|+.++||+++.+.
T Consensus       170 Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~  248 (262)
T PRK07831        170 YAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSS  248 (262)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999999999876543 344455566678899999999999999999999999


Q ss_pred             CccccEEEeCCCc
Q 041276          229 YITGQTICVDGGF  241 (251)
Q Consensus       229 ~~~G~~i~vdgG~  241 (251)
                      ++||+.|.+|+++
T Consensus       249 ~itG~~i~v~~~~  261 (262)
T PRK07831        249 YLTGEVVSVSSQH  261 (262)
T ss_pred             CcCCceEEeCCCC
Confidence            9999999999975

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.3e-39  Score=263.72  Aligned_cols=226  Identities=31%  Similarity=0.428  Sum_probs=196.0

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||++|||                   +.+.++.+.+++...+.++.++.+|++++++++++++++.+++ +++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999                   3344555556665555678889999999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      |++|||||... ..++.+.+.+.|++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|+++
T Consensus        81 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         81 NVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             CEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999999865 66777889999999999999999999999999998764 47999999999999988899999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CCHH-HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SDEK-FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      +.+++.++.|+.++||+||+|+||+++|++.....        ..+. ....+....|.+++.+|+|+|+.+.+|+++.+
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~  239 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDS  239 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999865321        1111 12344556788899999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 041276          228 SYITGQTICVDGGFTVN  244 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~  244 (251)
                      +++||+.|.+|||++++
T Consensus       240 ~~~~G~~i~vdgg~~~~  256 (256)
T PRK08643        240 DYITGQTIIVDGGMVFH  256 (256)
T ss_pred             cCccCcEEEeCCCeecC
Confidence            99999999999998763

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-39  Score=262.39  Aligned_cols=231  Identities=31%  Similarity=0.518  Sum_probs=206.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ...+++|+++||||++|||                   +.+.+.++.++++..+.++.++.+|+++++++.++++++...
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            5568999999999999999                   345556666666666667889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++
T Consensus        86 ~-~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (256)
T PRK06124         86 H-GRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAA  163 (256)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHH
Confidence            9 89999999999866 567788899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+++.+++++++.|+.++||+++.|+||+++|++.+.....++....+....|.+++.+|+|++..+++|+++.++++||
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G  243 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNG  243 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCC
Confidence            99999999999999999999999999999999987665445555666667788889999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                      +.|.+|||+..+
T Consensus       244 ~~i~~dgg~~~~  255 (256)
T PRK06124        244 HVLAVDGGYSVH  255 (256)
T ss_pred             CEEEECCCcccc
Confidence            999999998753

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-39  Score=262.27  Aligned_cols=224  Identities=29%  Similarity=0.489  Sum_probs=195.5

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------CeeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC---------------------FKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ++++.+|++|||||++|||     ..+++.+.+.|                     .++.++.+|++++++++++++++.
T Consensus        10 ~~~~~~k~vlItGas~~IG-----~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIG-----HAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             hcCCCCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            3578899999999999999     33333333222                     245578999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.+.|+|++++.++||++||..+..+.+.+..|+
T Consensus        85 ~~~-~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  162 (255)
T PRK06841         85 SAF-GRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYC  162 (255)
T ss_pred             HHh-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHH
Confidence            998 89999999999875 5667788999999999999999999999999999988789999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      ++|++++.++++++.|++++||+||.|+||+++|++.+..... ..........|.+++.+|+|+|+.+++|+++.+.++
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  241 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMI  241 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch-hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999999987654322 223344567788999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      ||+.|.+|||+++
T Consensus       242 ~G~~i~~dgg~~~  254 (255)
T PRK06841        242 TGENLVIDGGYTI  254 (255)
T ss_pred             cCCEEEECCCccC
Confidence            9999999999865

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-39  Score=264.44  Aligned_cols=227  Identities=28%  Similarity=0.392  Sum_probs=195.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++++|++|||||++|||                   +.+.+++..+++... +.++.++.+|++++++++++++.    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            357899999999999999                   344455555555543 45688899999999999988864    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||+|... ..++.+.+.++|+..+++|+.+++.++++++|.|++++.|+||+++|..+..+.+.+..|+++
T Consensus        79 ~-g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 A-GDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             h-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence            4 78999999999875 667889999999999999999999999999999998877899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--------CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      |+|+.+++++++.|+.++||+||+|+||+++|++....        ...++.+..+....|.+++.+|+|+|+.+++|++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS  236 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999964322        1234445555567788899999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccc
Q 041276          225 PAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      +.+.++||+.|.+|||+..+.
T Consensus       237 ~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        237 PRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             chhccccCceEEecCCeeecC
Confidence            999999999999999987654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=7.2e-39  Score=261.61  Aligned_cols=227  Identities=31%  Similarity=0.485  Sum_probs=197.3

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+.+++|+|+||||++|||                   +...++.+.+++...+.++.++.+|+++.++++++++.+.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999                   334444555555555567888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||+|... ..++ +.+.++|++.+++|+.+++.+++++.|+|.+.+.++||++||.++..+.+.+..|+++
T Consensus        86 ~-~~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  162 (255)
T PRK06113         86 L-GKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_pred             c-CCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHH
Confidence            8 89999999999865 3344 6789999999999999999999999999988777899999999999999889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+++|+++++.++.++||+||.|+||+++|++...... +..........|.+++.+|+|+++++.+|+++.+.++||
T Consensus       163 K~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G  241 (255)
T PRK06113        163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSG  241 (255)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999999998765432 344455556778888999999999999999999999999


Q ss_pred             cEEEeCCCcc
Q 041276          233 QTICVDGGFT  242 (251)
Q Consensus       233 ~~i~vdgG~~  242 (251)
                      +.|.+|||..
T Consensus       242 ~~i~~~gg~~  251 (255)
T PRK06113        242 QILTVSGGGV  251 (255)
T ss_pred             CEEEECCCcc
Confidence            9999999943

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-39  Score=264.08  Aligned_cols=232  Identities=31%  Similarity=0.490  Sum_probs=198.0

Q ss_pred             cCCCCCEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           13 WSLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ..+.+|++|||||++|||                  +.....+..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE-   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            457889999999999999                  1122333444444445578889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK  153 (251)
                      +++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+. .+.+.+..|+++|
T Consensus        81 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         81 GRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence            89999999999875 567778899999999999999999999999999988777899999998874 5667788999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      ++++.++++++.++.++||+|++|+||+++|++.+...      ..+.....+....|.+++.+|+|+|+.+.+|+++.+
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~  239 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDES  239 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999999875432      123345556667888999999999999999999999


Q ss_pred             CCccccEEEeCCCcccccc
Q 041276          228 SYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~~~  246 (251)
                      .++||++|.+|||+++..+
T Consensus       240 ~~~~g~~i~~dgg~~~~~~  258 (263)
T PRK08226        240 SYLTGTQNVIDGGSTLPET  258 (263)
T ss_pred             cCCcCceEeECCCcccCce
Confidence            9999999999999887644

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-39  Score=262.54  Aligned_cols=231  Identities=29%  Similarity=0.545  Sum_probs=202.6

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.+++.+|+++||||++|||                   +.+++++..+.+...+.++.++++|+++.++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44578899999999999999                   34555566666666666788999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+.+..|++
T Consensus        84 ~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         84 EV-GVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             hC-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence            98 89999999999876 56778899999999999999999999999999999888899999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC------CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +|+++..++++++.|+.++||+|++|+||+++|++......      ...+........|..++.+|+|+|+.+.+|+++
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  241 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASD  241 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999998754321      122333445567888899999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                      .+.+++|+.+.+|||...
T Consensus       242 ~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        242 ASNFVNGHILYVDGGILA  259 (265)
T ss_pred             ccCCCCCCEEEECCCcee
Confidence            899999999999999654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-38  Score=259.19  Aligned_cols=226  Identities=26%  Similarity=0.377  Sum_probs=195.3

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||++|||                   +...++++.+.+...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence            58999999999999                   3444555556665555678899999999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      |++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|+|.++ ..|+||++||..+..+.+....|++||+|+
T Consensus        80 d~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         80 DALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             cEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999999754 5567789999999999999999999999999999765 358999999999988888889999999999


Q ss_pred             HHHHHHHHHHHcc-CCeEEEEEecCcccCC-CCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          157 NQLAKNLACEWAR-DNIRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       157 ~~~~~~la~e~~~-~~i~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      .+|+++++.|+.+ +||++|.|+||+++|+ +.......++..+.+....|.+++.+|+|+|+.+.+|+++.+.++||+.
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTC  238 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCE
Confidence            9999999999974 7999999999999964 3333333455566666778888999999999999999999889999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      +.+|||..+.
T Consensus       239 ~~~~gg~~~~  248 (252)
T PRK07677        239 ITMDGGQWLN  248 (252)
T ss_pred             EEECCCeecC
Confidence            9999997764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=2e-39  Score=265.88  Aligned_cols=226  Identities=29%  Similarity=0.410  Sum_probs=185.3

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHh---------------------cCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKT---------------------KCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~---------------------~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++++|+++||||++|||     ..+++.+.+                     .+.++.++.+|+++.+++.++++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLG-----RAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CcCCcEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            46789999999999999     222222221                     1345778899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCH----HHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMA----EDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      + +++|++|||||......++.+.+.    ++|++.+++|+.+++.++++++|+|++++ |++|+++|..+..+.+....
T Consensus        77 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~  154 (262)
T TIGR03325        77 F-GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPL  154 (262)
T ss_pred             h-CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCch
Confidence            9 899999999997542333333333    57999999999999999999999998765 89999999999988888889


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---CC-----HHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---SD-----EKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      |++||+|++.|+++++.|++++ |+||+|+||+++|+|.....   ..     ....+......|.+++.+|+|+|+.++
T Consensus       155 Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~  233 (262)
T TIGR03325       155 YTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYV  233 (262)
T ss_pred             hHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhhee
Confidence            9999999999999999999987 99999999999999865321   11     112233445679999999999999999


Q ss_pred             HHcCCC-CCCccccEEEeCCCccccccc
Q 041276          221 FLCMPA-ASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       221 ~l~~~~-~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      ||+++. +.++||+.|.+|||+.+.+++
T Consensus       234 ~l~s~~~~~~~tG~~i~vdgg~~~~~~~  261 (262)
T TIGR03325       234 FFATRGDTVPATGAVLNYDGGMGVRGFF  261 (262)
T ss_pred             eeecCCCcccccceEEEecCCeeecccc
Confidence            999974 678999999999999887754

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.1e-38  Score=263.95  Aligned_cols=239  Identities=23%  Similarity=0.326  Sum_probs=193.6

Q ss_pred             CCCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 041276            6 DHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus         6 ~~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      ..+......+++|++|||||++|||                   +.+..++..+++. .+.++.++.+|++|.+++++++
T Consensus         7 ~~~~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~   85 (280)
T PLN02253          7 SASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAV   85 (280)
T ss_pred             hhccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHH
Confidence            3344456678899999999999999                   1222333333332 1346788999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  145 (251)
                      +++.+.+ +++|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||+++|.++..+.+.
T Consensus        86 ~~~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  164 (280)
T PLN02253         86 DFTVDKF-GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG  164 (280)
T ss_pred             HHHHHHh-CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC
Confidence            9999999 899999999997642 24577889999999999999999999999999998877799999999999888888


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH----HHHH----HHhhCCCC-CCCCCHHHHH
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE----KFLE----EVKCRTPM-ERPGEPKEVS  216 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~----~~~~----~~~~~~~~-~~~~~~~dva  216 (251)
                      ...|++||+|++.++++++.|++++||+||.++||+++|++.....+..    ....    ......+. ++..+|+|+|
T Consensus       165 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva  244 (280)
T PLN02253        165 PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVA  244 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHH
Confidence            8899999999999999999999999999999999999999764332221    1111    11122333 4557899999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCCCcccccc
Q 041276          217 SLVAFLCMPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      +++++|+++.+.+++|+.|.+|||....-.
T Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        245 NAVLFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             HHHHhhcCcccccccCcEEEECCchhhccc
Confidence            999999999999999999999999875443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.9e-39  Score=256.73  Aligned_cols=204  Identities=24%  Similarity=0.327  Sum_probs=184.1

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+.++++||||||+|||                   ++++|+++.+++... +.++.++++|+++++++.++.+++.+.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            46789999999999999                   788999999999875 5789999999999999999999999987


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       ..||+||||||+.. .+++.+.+.++..+++++|+.+.+.++++++|.|.+++.|.||+++|.++..+.|..+.|++||
T Consensus        83 -~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 -GPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             -CcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence             79999999999987 7899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +++.+|+++|+.|+.+.||+|..++||++.|++.+. .....     ....+...+.+|+++|+..+..+..
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~~~~-----~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KGSDV-----YLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-ccccc-----ccccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999862 11111     1123455678999999999998854

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-39  Score=269.29  Aligned_cols=224  Identities=21%  Similarity=0.279  Sum_probs=181.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------c----------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------N----------EAELNECLREWKTKCFKVTGSVCDASSRAER   62 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   62 (251)
                      +.++++|++|||||++|||                   +          .+.++++.+.+...+.++.++.+|+++++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            3568899999999999999                   2          2345556666666666788899999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcc-cCCC---CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc
Q 041276           63 EKLMKQVSSLFNGKLNILINNV-GTNY---TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC  138 (251)
Q Consensus        63 ~~~~~~i~~~~~~~id~lv~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~  138 (251)
                      +++++++.+.+ +++|++|||| |...   ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..
T Consensus        83 ~~~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         83 RALVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            99999999999 8999999999 7531   12466778899999999999999999999999999887779999999976


Q ss_pred             ccc---CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCC-CCCCCCHH
Q 041276          139 GVL---STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTP-MERPGEPK  213 (251)
Q Consensus       139 ~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~  213 (251)
                      +..   +.+....|++||+|+.+|+++|+.|++++||+||+|+||+++|+|...... .++.+.....+.| .++..+|+
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~pe  241 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPR  241 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHH
Confidence            643   233567899999999999999999999999999999999999998532211 1111222222456 46677999


Q ss_pred             HHHHHHHHHcCCCC-CCccccEEE
Q 041276          214 EVSSLVAFLCMPAA-SYITGQTIC  236 (251)
Q Consensus       214 dva~~~~~l~~~~~-~~~~G~~i~  236 (251)
                      |+|+.+++|+++.. .++|||.|.
T Consensus       242 evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        242 YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHcCcchhhcCCcEEE
Confidence            99999999999874 689999875

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-38  Score=285.09  Aligned_cols=226  Identities=31%  Similarity=0.544  Sum_probs=194.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ....+|++|||||++|||                   +.+.++++.+++   +.++..+.+|++|+++++++++++.+.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999                   233333333332   3456778999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||......++.+.+.++|++++++|+.+++.+++.++|+|+  +.|+||++||.++..+.++...|+++|
T Consensus       342 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK  418 (520)
T PRK06484        342 -GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASK  418 (520)
T ss_pred             -CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHH
Confidence             89999999999865345777889999999999999999999999999993  348999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      +++++|+++++.|+.++||+||+|+||+++|++...... .+...+.+....|.++..+|+|+|+.++||+++.+.++||
T Consensus       419 aal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G  498 (520)
T PRK06484        419 AAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNG  498 (520)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            999999999999999999999999999999998765432 2333445566778899999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                      +.|.+|||+...
T Consensus       499 ~~i~vdgg~~~~  510 (520)
T PRK06484        499 ATLTVDGGWTAF  510 (520)
T ss_pred             cEEEECCCccCC
Confidence            999999997543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=259.24  Aligned_cols=225  Identities=28%  Similarity=0.388  Sum_probs=189.4

Q ss_pred             CCCCCEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           14 SLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        14 ~l~~k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .+++|++|||||++|||                  +.....++.+++...+.++.++.+|+++.+++.++++++.+.+ +
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF-G   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-C
Confidence            36789999999999999                  1122334445555556678889999999999999999999998 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..  .....|++||+|
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a  161 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGG  161 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHH
Confidence            999999999975435677789999999999999999999999999999988778999999987752  345689999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC------CC-----CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY------LS-----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ++.|+++++.|++++||+|+.|+||++.||+....      ..     .+++........|++++.+|+|+|+++++|++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  241 (260)
T PRK12823        162 VNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLAS  241 (260)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999863210      00     12333445556788999999999999999999


Q ss_pred             CCCCCccccEEEeCCCc
Q 041276          225 PAASYITGQTICVDGGF  241 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~  241 (251)
                      +.+.+++|+.+.+|||.
T Consensus       242 ~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        242 DEASYITGTVLPVGGGD  258 (260)
T ss_pred             cccccccCcEEeecCCC
Confidence            99999999999999986

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=258.88  Aligned_cols=226  Identities=30%  Similarity=0.386  Sum_probs=192.2

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------eeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------KVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ..++++|++|||||++|||     .++++.+.+.|.               ++.++.+|++++++++++++++.+.+ ++
T Consensus         4 ~~~~~~k~vlItGas~gIG-----~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   77 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIG-----AATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERL-GG   77 (260)
T ss_pred             CcCCCCCEEEEECCCCchh-----HHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHc-CC
Confidence            3457899999999999999     677777665543               35578899999999999999999998 89


Q ss_pred             ccEEEEcccCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-CChhhHHhHH
Q 041276           77 LNILINNVGTNY-TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-LGTIYAATKG  154 (251)
Q Consensus        77 id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~  154 (251)
                      +|++|||||... ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+ ....|+++|+
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~  157 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKA  157 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHH
Confidence            999999999753 23456778999999999999999999999999999988779999999999988855 7889999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--------C-HHHHHH---HhhCCCCCCCCCHHHHHHHHHHH
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--------D-EKFLEE---VKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--------~-~~~~~~---~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      +++.|+++++.++.++||++|.|+||+++|++......        . ++....   .....|.++..+|+|+|+.+.||
T Consensus       158 a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l  237 (260)
T PRK06523        158 ALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFL  237 (260)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999998643210        1 111111   12357888999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 041276          223 CMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++.+++++|+.+.+|||...
T Consensus       238 ~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        238 ASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             hCcccccccCceEEecCCccC
Confidence            999999999999999999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-39  Score=259.51  Aligned_cols=179  Identities=27%  Similarity=0.344  Sum_probs=161.0

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-C-eeEEEeccCCCHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-F-KVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~-~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ...+..+++|+|+|||||+|||                   ...+++.+.+++++.+ . +++++++|++|.++++++++
T Consensus         4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~   83 (282)
T KOG1205|consen    4 NLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE   83 (282)
T ss_pred             cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH
Confidence            3456788999999999999999                   4455666666666542 2 58999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++..+| |++|+||||||... .....+.+.++++++|++|++|++.|++.++|+|++++.|+||++||++|..+.|...
T Consensus        84 ~~~~~f-g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~  161 (282)
T KOG1205|consen   84 WAIRHF-GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRS  161 (282)
T ss_pred             HHHHhc-CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccc
Confidence            999999 89999999999988 8888889999999999999999999999999999999899999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCC--eEEEEEecCcccCCCCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDN--IRINSVAPWFITTPLTEPY  190 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pG~v~t~~~~~~  190 (251)
                      .|++||+|+.+|+.+|+.|+.+++  |++ .|+||+|+|++....
T Consensus       162 ~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  162 IYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             ccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            999999999999999999999877  566 999999999976543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.8e-38  Score=256.24  Aligned_cols=223  Identities=25%  Similarity=0.374  Sum_probs=190.3

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc----------------------CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK----------------------CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~----------------------~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+++|++|||||++|||     .++++.+.+.                      +.++.++.+|++++++++++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG-----~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          2 QISEQTVLVTGGSRGLG-----AAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCEEEEeCCCCcHH-----HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999     3333333222                      23567789999999999999999999


Q ss_pred             hcCCC-ccEEEEcccCCC-----CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC
Q 041276           72 LFNGK-LNILINNVGTNY-----TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        72 ~~~~~-id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  145 (251)
                      .+ ++ +|++|||||...     ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||+++|..+..+..+
T Consensus        77 ~~-g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  155 (253)
T PRK08642         77 HF-GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP  155 (253)
T ss_pred             Hh-CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC
Confidence            88 66 999999998642     123567889999999999999999999999999998877799999999888777777


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +..|+++|+|++.|+++++++++++||+||+|+||+++|+...... .+.....+....|.+++.+|+|+|+.+.+|+++
T Consensus       156 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  234 (253)
T PRK08642        156 YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASP  234 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCc
Confidence            8899999999999999999999999999999999999998654432 344455566778889999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                      .+.+++|+.|.+|||+.+
T Consensus       235 ~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        235 WARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             hhcCccCCEEEeCCCeec
Confidence            999999999999999765

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-38  Score=259.52  Aligned_cols=215  Identities=25%  Similarity=0.394  Sum_probs=180.0

Q ss_pred             CCEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           17 GMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        17 ~k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +|++||||+ +|||                  +.++++++.+++...+.++.++.+|++|+++++++++++ +++ +++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVGAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCCC
Confidence            589999998 6999                  344555666666655667889999999999999999998 457 7999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC---------------
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST---------------  143 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~---------------  143 (251)
                      +||||||...        ..++|++.+++|+.+++.+++.+.|+|+++  |++|+++|.++..+.               
T Consensus        79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccc
Confidence            9999999753        135699999999999999999999999764  778999998876542               


Q ss_pred             ---------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHHHHhhCCCC
Q 041276          144 ---------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPM  206 (251)
Q Consensus       144 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~  206 (251)
                                     +.+..|++||+|+..++++++.|++++||+||+|+||+++|++......  .++..+......|.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  228 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence                           2467899999999999999999999999999999999999998754221  12333444556789


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       207 ~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++.+|+|+|+.++||+++.++++||+.|.+|||..+.
T Consensus       229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            99999999999999999999999999999999997654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-38  Score=255.90  Aligned_cols=224  Identities=25%  Similarity=0.381  Sum_probs=192.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.+.+|++|||||++|||     .++++.+.++                     +.++.++.+|++++++++++++++.+
T Consensus         2 ~~l~~~~vlItGas~~iG-----~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIG-----EAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHH-----HHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            457789999999999999     3333333222                     23467889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      .+ +++|++|||+|... ..++.+.+.++++..+++|+.+++.+++++.++|.+++ .++||++||..+..+.+....|+
T Consensus        77 ~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  154 (257)
T PRK07067         77 RF-GGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYC  154 (257)
T ss_pred             Hc-CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhh
Confidence            98 89999999999875 56777889999999999999999999999999998764 47999999999999988999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      +||++++.++++++.|+.++||+++.|+||+++|++.+...         ...+....+....|.+++.+|+|+|+++++
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (257)
T PRK07067        155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALF  234 (257)
T ss_pred             hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999864321         112233445567889999999999999999


Q ss_pred             HcCCCCCCccccEEEeCCCccc
Q 041276          222 LCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      |+++.+.+++|+++.+|||..+
T Consensus       235 l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        235 LASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HhCcccccccCcEEeecCCEeC
Confidence            9999999999999999999765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-37  Score=252.90  Aligned_cols=227  Identities=29%  Similarity=0.459  Sum_probs=199.8

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++|++|||||++|||                    +...++++.++++..+.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4679999999999999                    2334445555666556678889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||+|... ..++.+.+.+.++..+++|+.+++.+++++.++|++++.|+||++||..+..+.+....|+++|+
T Consensus        81 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         81 GRLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            89999999999865 56778889999999999999999999999999999888899999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.|+++++.++.+.||+++.|+||+++|++...+....+.........|.++..+++|+|+.+++++++...+++|+.
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  239 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQT  239 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            99999999999999999999999999999998766544455555556667777889999999999999998888999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      +.+|||.++
T Consensus       240 ~~~~gg~~~  248 (250)
T PRK08063        240 IIVDGGRSL  248 (250)
T ss_pred             EEECCCeee
Confidence            999999874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.7e-37  Score=252.12  Aligned_cols=225  Identities=26%  Similarity=0.411  Sum_probs=195.1

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++|++|||||++|||                    +....++..+++...+.++..+.+|++|.++++++++++.+.+ 
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-   79 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            4689999999999999                    1222333334444445567778899999999999999999998 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+++..|+++|+
T Consensus        80 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         80 GEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            89999999999875 55777889999999999999999999999999999887789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.++++++.++.++||++++|+||++.|++.+...  ++..+......|.++..+|+|+++.+.+|+++.+.+++|+.
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~  236 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR--PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGAD  236 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC--hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcE
Confidence            9999999999999999999999999999999876542  34445555567888899999999999999999899999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      +.+|||+.+
T Consensus       237 ~~~~~g~~~  245 (246)
T PRK12938        237 FSLNGGLHM  245 (246)
T ss_pred             EEECCcccC
Confidence            999999764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=250.81  Aligned_cols=214  Identities=21%  Similarity=0.312  Sum_probs=182.0

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFK-------------------VTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||++|||     .++++.+.+.|.+                   +.++.+|+++.++++++++++.+.+ +++
T Consensus         2 ~k~vlItGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIG-----LALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHT-DGL   75 (236)
T ss_pred             CceEEEECCCChHH-----HHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence            58999999999999     4444444433322                   4567899999999999999999998 799


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccCCCCChhhHHhHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      |++|||||... .....+.+.++|++.+++|+.+++.+++.++|.|++.+  .|+||++||..+..+.+.+..|++||+|
T Consensus        76 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa  154 (236)
T PRK06483         76 RAIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAA  154 (236)
T ss_pred             cEEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence            99999999865 34456778999999999999999999999999998875  6899999999998888889999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.|+++++.|+++ +||||+|+||++.++..    ..+........+.|.++...|+|+|+.+.||++  +.++||+.|
T Consensus       155 l~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i  227 (236)
T PRK06483        155 LDNMTLSFAAKLAP-EVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSL  227 (236)
T ss_pred             HHHHHHHHHHHHCC-CcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEE
Confidence            99999999999987 59999999999987642    123334444556788899999999999999996  678999999


Q ss_pred             EeCCCcccc
Q 041276          236 CVDGGFTVN  244 (251)
Q Consensus       236 ~vdgG~~~~  244 (251)
                      .+|||+.++
T Consensus       228 ~vdgg~~~~  236 (236)
T PRK06483        228 PVDGGRHLK  236 (236)
T ss_pred             EeCcccccC
Confidence            999998764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2e-37  Score=252.54  Aligned_cols=225  Identities=28%  Similarity=0.364  Sum_probs=196.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------CeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC---------------FKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +++++|++|||||+++||     ..+++.+.+.|               .++.++++|++++++++++++++.+.+ +++
T Consensus         4 ~~~~~k~vlItGas~~iG-----~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   77 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIG-----YAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAET-GPL   77 (252)
T ss_pred             cCCCCCEEEEeCCCchHH-----HHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            457899999999999999     66666665544               346678899999999999999999998 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++|||+|... ..++.+.+.+++++.+++|+.+++.+++++.++|++++.|+||++||..+..+.+....|+++|++++
T Consensus        78 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  156 (252)
T PRK08220         78 DVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALT  156 (252)
T ss_pred             CEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHH
Confidence            99999999876 56677889999999999999999999999999999888899999999999988888999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH--------HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK--------FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      .++++++.|++++||+|+.++||++.|++.......+.        ..+......|.+++.+|+|+|+++++|+++.+.+
T Consensus       157 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  236 (252)
T PRK08220        157 SLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASH  236 (252)
T ss_pred             HHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcC
Confidence            99999999999999999999999999998754432211        1233445567888999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      ++|++|.+|||..+.
T Consensus       237 ~~g~~i~~~gg~~~~  251 (252)
T PRK08220        237 ITLQDIVVDGGATLG  251 (252)
T ss_pred             ccCcEEEECCCeecC
Confidence            999999999998875

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-37  Score=253.85  Aligned_cols=231  Identities=24%  Similarity=0.448  Sum_probs=196.6

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++++|++|||||++|||                   +.+.+....+.+...+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999                   33444455555555555678899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ |+||++||.++..+.+.+..|++
T Consensus        83 ~~-~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~~~~~~Y~a  159 (264)
T PRK07576         83 EF-GPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCA  159 (264)
T ss_pred             Hc-CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCCCCccHHHH
Confidence            88 89999999999765 56677889999999999999999999999999997654 89999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCccc-CCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFIT-TPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +|++++.|+++++.|+.++||+|+.|+||+++ |+......+.+.....+....|.++..+|+|+|+.+++|+++.+.++
T Consensus       160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  239 (264)
T PRK07576        160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYI  239 (264)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCc
Confidence            99999999999999999999999999999997 56444333444444444455788888999999999999999888999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      +|+.+.+|||+.+.
T Consensus       240 ~G~~~~~~gg~~~~  253 (264)
T PRK07576        240 TGVVLPVDGGWSLG  253 (264)
T ss_pred             cCCEEEECCCcccC
Confidence            99999999998643

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-37  Score=252.28  Aligned_cols=230  Identities=26%  Similarity=0.423  Sum_probs=200.4

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+..++++|+++||||++|||                   +.+.++.+..++...+.++.++.+|+++.++++++++++.
T Consensus         2 ~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          2 GRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             CcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            345568899999999999999                   4455566666666555678899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--------CceEEEecccccccC
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--------AGNIILVSSVCGVLS  142 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--------~g~iv~vss~~~~~~  142 (251)
                      +.+ +++|++|||+|... ..++.+.+.++|+.++++|+.+++.+++.+.|.|+++.        .+++|+++|..+..+
T Consensus        82 ~~~-~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  159 (258)
T PRK06949         82 TEA-GTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV  159 (258)
T ss_pred             Hhc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence            988 89999999999865 55667788999999999999999999999999998664        479999999999888


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      .+....|+++|++++.++++++.++.++||+|+.|+||+++|++....... +....+....|.++.+.|+|+++.++||
T Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l  238 (258)
T PRK06949        160 LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLL  238 (258)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            888899999999999999999999999999999999999999997654332 3334555677888999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcc
Q 041276          223 CMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~  242 (251)
                      +++.++++||+.|.+|||+.
T Consensus       239 ~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        239 AADESQFINGAIISADDGFG  258 (258)
T ss_pred             hChhhcCCCCcEEEeCCCCC
Confidence            99999999999999999973

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=250.25  Aligned_cols=218  Identities=27%  Similarity=0.423  Sum_probs=187.6

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe---------------eEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK---------------VTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~---------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      ++++|+++||||++|||     ..+++.+.+.|.+               +.++.+|++++      ++++.+.+ +++|
T Consensus         2 ~l~~k~~lVtGas~~iG-----~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~------~~~~~~~~-~~id   69 (235)
T PRK06550          2 EFMTKTVLITGAASGIG-----LAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD------LEPLFDWV-PSVD   69 (235)
T ss_pred             CCCCCEEEEcCCCchHH-----HHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHH------HHHHHHhh-CCCC
Confidence            57889999999999999     7777777665533               44667788776      44455556 7999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      ++|||+|......++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++++
T Consensus        70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  149 (235)
T PRK06550         70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAG  149 (235)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHH
Confidence            99999997643456778899999999999999999999999999998878999999999999988889999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      ++++++.|+.++||+++.|+||+++|++.......+..........|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|
T Consensus       150 ~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~  229 (235)
T PRK06550        150 FTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPID  229 (235)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEEC
Confidence            99999999999999999999999999987654444444455556788899999999999999999998999999999999


Q ss_pred             CCccc
Q 041276          239 GGFTV  243 (251)
Q Consensus       239 gG~~~  243 (251)
                      ||+++
T Consensus       230 gg~~~  234 (235)
T PRK06550        230 GGWTL  234 (235)
T ss_pred             Cceec
Confidence            99865

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-37  Score=250.15  Aligned_cols=229  Identities=28%  Similarity=0.388  Sum_probs=201.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|+++||||++|||                   +.+.+....++++..+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            456789999999999999                   3444555555665555678899999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|... ..+..+.+.+.+++.++.|+.+++.+++.+.|+|.+++.|++|++||..+..+.+....|+++|
T Consensus        83 -~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         83 -GGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence             89999999999876 5667788999999999999999999999999999988789999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.+++.++.++.+++|+++.|+||+++|++.+.... ......+....|..++.+|+|+|+.+++++++..++++|+
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQ  239 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCc
Confidence            999999999999999999999999999999999876533 2444455556788889999999999999999888899999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .|.+|||++|+
T Consensus       240 ~i~~~gg~~~~  250 (250)
T PRK12939        240 LLPVNGGFVMN  250 (250)
T ss_pred             EEEECCCcccC
Confidence            99999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-37  Score=255.09  Aligned_cols=230  Identities=34%  Similarity=0.514  Sum_probs=198.2

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------c-HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------N-EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.++++|++|||||++|||                   + ...++...+.+...+.++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578899999999999999                   1 1233444445555456788999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||......++.+.+.++|.+.+++|+.+++.+++++.++|++.  ++||++||.++..+.+.+..|++
T Consensus       121 ~~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 EL-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--SAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             Hc-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--CeEEEEecccccCCCCCcchhHH
Confidence            98 8999999999987545667789999999999999999999999999999653  79999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|+|++.++++++.++.++||+|++|+||+++|++...... ++....+....+.+++.+|+|+|+++++|+++.+.+++
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~  276 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYIT  276 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999999999999999999999998765432 33344455667888899999999999999999999999


Q ss_pred             ccEEEeCCCccccc
Q 041276          232 GQTICVDGGFTVNG  245 (251)
Q Consensus       232 G~~i~vdgG~~~~~  245 (251)
                      |+.|.+|||+...+
T Consensus       277 G~~i~idgg~~~~~  290 (290)
T PRK06701        277 GQMLHVNGGVIVNG  290 (290)
T ss_pred             CcEEEeCCCcccCC
Confidence            99999999987653

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-37  Score=250.64  Aligned_cols=228  Identities=28%  Similarity=0.338  Sum_probs=197.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+++|+++||||++|||                   +...++++.+++...+.++.++.+|+++.++++++++++.+.+ 
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-   80 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-
Confidence            46789999999999999                   3444555556665556678899999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||...+..++.+.+.++|++.+++|+.+++.+++++.++|++.+ ++||++||..+..+.+++..|+++|+
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK~  159 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKG  159 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHHH
Confidence            89999999999865446777889999999999999999999999999998764 79999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +++.++++++.|++++||+++.++||++.|++.....         ..+.....+....+.+++.+|+|+|+++.+|+++
T Consensus       160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCH
Confidence            9999999999999999999999999999999764321         1234444555567888899999999999999998


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                      .+.+++||.|.+|||..+
T Consensus       240 ~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        240 LARAITGQTLDVNCGEYH  257 (258)
T ss_pred             hhhCccCcEEEeCCcccc
Confidence            888999999999999765

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-36  Score=246.22  Aligned_cols=228  Identities=32%  Similarity=0.497  Sum_probs=198.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||+++||                   +...++++...+.. +.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF-   79 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            46889999999999999                   23334444444433 4567889999999999999999998888 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+|||++|......++.+.+.+.+++.+++|+.+++.+++.++++|++++.++||++||..+..+.++...|+.+|+
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKG  159 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHH
Confidence            89999999999865456677889999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      ++..+++.++.+++++||++++++||++.|++.......  ++....+....|.+++.+|+|+|+++++|+++...+++|
T Consensus       160 ~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  239 (251)
T PRK07231        160 AVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITG  239 (251)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            999999999999998899999999999999987665431  234445556778888899999999999999988889999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.+.+|||..+
T Consensus       240 ~~~~~~gg~~~  250 (251)
T PRK07231        240 VTLVVDGGRCV  250 (251)
T ss_pred             CeEEECCCccC
Confidence            99999999765

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=254.78  Aligned_cols=226  Identities=26%  Similarity=0.372  Sum_probs=190.3

Q ss_pred             CCcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      .....++++|++|||||++|||                    +...++++.+++...+.++.++.+|+++.++++++++.
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4456778999999999999999                    22345566677766677889999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-------CceEEEeccccccc
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-------AGNIILVSSVCGVL  141 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-------~g~iv~vss~~~~~  141 (251)
                      +.+ + +++|+||||||... ...+.+.+.++|+..+++|+.+++.+++++.++|+++.       .|+||++||.++..
T Consensus        84 ~~~-~-g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         84 AVG-L-GGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             HHH-h-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            998 8 89999999999876 55677889999999999999999999999999997541       37999999999998


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-HHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      +.+....|+++|+|++.|+++++.|+.++||+||+|+||. .|+|....... +....      ......+|+++|+.+.
T Consensus       161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~------~~~~~~~pe~va~~v~  233 (306)
T PRK07792        161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEA------GGIDPLSPEHVVPLVQ  233 (306)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhh------hccCCCCHHHHHHHHH
Confidence            8888999999999999999999999999999999999994 88876543221 11100      1112347999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCcccc
Q 041276          221 FLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ||+++.+.++||+.+.+|||....
T Consensus       234 ~L~s~~~~~~tG~~~~v~gg~~~~  257 (306)
T PRK07792        234 FLASPAAAEVNGQVFIVYGPMVTL  257 (306)
T ss_pred             HHcCccccCCCCCEEEEcCCeEEE
Confidence            999998999999999999998653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.8e-39  Score=237.08  Aligned_cols=219  Identities=31%  Similarity=0.365  Sum_probs=195.7

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++|++|++||+.-|||     ++....+...                     ...+..+..|+++.+.+.+++..+   
T Consensus         4 ~laG~~vlvTgagaGIG-----~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v---   75 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIG-----KEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV---   75 (245)
T ss_pred             cccceEEEeeccccccc-----HHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc---
Confidence            57999999999999999     4444444333                     334667789999988877777554   


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                        +.+|.++||||+.. ..++.+.+.+.+++.|++|+++.+.++|...+-+..+ ..|.||++||.++.++..+...|++
T Consensus        76 --~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             --Cchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence              78999999999987 7889999999999999999999999999987766543 4588999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|+|+.+++|++|.|+++++||||.+.|-.+.|.|.+.-.+++........++|++++.+.+|+.+++.||+|+.++..|
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmtt  232 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTT  232 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCccc
Confidence            99999999999999999999999999999999999999889988888888999999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |..+.++|||+.
T Consensus       233 GstlpveGGfs~  244 (245)
T KOG1207|consen  233 GSTLPVEGGFSN  244 (245)
T ss_pred             CceeeecCCccC
Confidence            999999999975

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=247.18  Aligned_cols=232  Identities=30%  Similarity=0.472  Sum_probs=201.1

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.+.++++.+.+...+.++.++.+|++++++++++++++.+.+ 
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF-   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            57899999999999999                   3344555555665556678889999999999999999999998 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-CCCceEEEecccccccCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      +++|+|||+||... ...+.+.+.+++++.+++|+.+++.+++++.++|++ .+.++||++||..+..+.++...|+++|
T Consensus        86 ~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         86 GRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            89999999999865 566778899999999999999999999999999987 4668999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.++++++.|+.+ +|+++.|+||++.|++.......+..........+..+..+|+|+|+.+++++++...+++|+
T Consensus       165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  243 (263)
T PRK07814        165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGK  243 (263)
T ss_pred             HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCC
Confidence            9999999999999987 699999999999999876543345555555566788888999999999999999888999999


Q ss_pred             EEEeCCCcccccccc
Q 041276          234 TICVDGGFTVNGFFF  248 (251)
Q Consensus       234 ~i~vdgG~~~~~~~~  248 (251)
                      .+.+|||...-..++
T Consensus       244 ~~~~~~~~~~~~~~~  258 (263)
T PRK07814        244 TLEVDGGLTFPNLDL  258 (263)
T ss_pred             EEEECCCccCCCCCC
Confidence            999999987754443

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=245.14  Aligned_cols=224  Identities=29%  Similarity=0.423  Sum_probs=195.3

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++++|+++||||++|||                    +....+++.+.+...+.++.++.+|++++++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357889999999999999                    122344455555555667888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|++  .++||++||.++..+.+.+..|+++
T Consensus        81 ~-~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (245)
T PRK12937         81 F-GRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAAS  156 (245)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHH
Confidence            9 89999999999865 567778899999999999999999999999999965  3799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.++.+.|++++.++||+++|++..... .+.....+....|.++..+|+|+|+.+.+|+++.+.+++|
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g  235 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNG  235 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccc
Confidence            999999999999999999999999999999999864322 2344566667788899999999999999999998999999


Q ss_pred             cEEEeCCCc
Q 041276          233 QTICVDGGF  241 (251)
Q Consensus       233 ~~i~vdgG~  241 (251)
                      +.|.+|||+
T Consensus       236 ~~~~~~~g~  244 (245)
T PRK12937        236 QVLRVNGGF  244 (245)
T ss_pred             cEEEeCCCC
Confidence            999999986

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.7e-36  Score=246.40  Aligned_cols=226  Identities=25%  Similarity=0.323  Sum_probs=189.8

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHh---------------------cCCeeEEEeccCCCHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKT---------------------KCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~---------------------~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +.+.+.++||+++||||++|||     .++++.+.+                     .+.++.++.+|+++.++++++++
T Consensus         2 ~~~~~~~~~k~vlItG~sg~IG-----~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   76 (255)
T PRK05717          2 SEPNPGHNGRVALVTGAARGIG-----LGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVA   76 (255)
T ss_pred             CCCCcccCCCEEEEeCCcchHH-----HHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHH
Confidence            3456788999999999999999     222222221                     13357788999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG  146 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  146 (251)
                      ++.+.+ +++|++|||||...+ ..++.+.+.++|++.+++|+.+++.+++++.|+|++.. |+||++||..+..+.+..
T Consensus        77 ~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~ii~~sS~~~~~~~~~~  154 (255)
T PRK05717         77 EVLGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQSEPDT  154 (255)
T ss_pred             HHHHHh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-cEEEEEcchhhcCCCCCC
Confidence            999998 899999999998653 24667889999999999999999999999999998764 899999999999998889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|+++|+|++.++++++.++.. +|+|++|+||+++|++..... ............|.+++.+|+|+|+.+.+|+++.
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        155 EAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            99999999999999999999986 499999999999999754321 1222233334568889999999999999999988


Q ss_pred             CCCccccEEEeCCCccc
Q 041276          227 ASYITGQTICVDGGFTV  243 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~  243 (251)
                      +.+++|+.+.+|||+..
T Consensus       233 ~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        233 AGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             hcCccCcEEEECCCceE
Confidence            88999999999999764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.6e-36  Score=245.27  Aligned_cols=217  Identities=29%  Similarity=0.429  Sum_probs=190.2

Q ss_pred             EEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           20 ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        20 vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++||||++|||                    +.+.++...++++..+.++.++.+|+++.++++++++++.+.+ +++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            58999999999                    2344556666666666788999999999999999999999988 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH-PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      ++||+|... ..++.+.+.++|+..+++|+.+++.+++.++ |.+++++.++||++||.++..+.+....|+++|+++..
T Consensus        80 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        80 VVLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999999876 5567788999999999999999999999875 55565666899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      ++++++.|+.++||+++.|+||+++|++.....   +..+......|+++..+|+|+|+.++||+++.+.+++|+.|.+|
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~  235 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVN  235 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            999999999999999999999999999986542   22344456788999999999999999999999999999999999


Q ss_pred             CCc
Q 041276          239 GGF  241 (251)
Q Consensus       239 gG~  241 (251)
                      ||+
T Consensus       236 gg~  238 (239)
T TIGR01831       236 GGM  238 (239)
T ss_pred             CCc
Confidence            996

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2.1e-36  Score=246.72  Aligned_cols=224  Identities=31%  Similarity=0.460  Sum_probs=195.5

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |+++||||++|||                   +...++++.+.+...+.++.++.+|++|+++++++++.+.+.+ +++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6899999999999                   3344555666666666678899999999999999999999998 7999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      ++|||+|... ..++.+.+.+.|++.+++|+.+++.+++.+++.|++.+ .+++|++||..+..+.+....|+++|++++
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        80 VMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            9999999865 66778899999999999999999999999999998865 479999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---------HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      .++++++.++.+.||+|+.++||+++|++.+.....         ......+....+.+++.+|+|+++++.+|+++.+.
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  238 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSD  238 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccC
Confidence            999999999999999999999999999986543211         12234445567888999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      +++|+.+.+|||+.+
T Consensus       239 ~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       239 YITGQSILVDGGMVY  253 (254)
T ss_pred             CccCcEEEecCCccC
Confidence            999999999999765

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2.8e-36  Score=245.42  Aligned_cols=227  Identities=28%  Similarity=0.452  Sum_probs=197.8

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +++|++|||||+++||                   +.....++.+.+.+.+.++.++.+|+++.++++++++.+.+.+ +
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4689999999999999                   2333444444555445578889999999999999999999998 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|++||++|... ..++.+.+.+++++.+++|+.+++.+++.+.++|++.+.++||++||.++..+.+....|+++|+|
T Consensus        80 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        80 PVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            9999999999865 566778889999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ++.++++++.++.+.|++++.++||+++|++.....    ..+.....+....|.++..+|+|+|+.+.+|+++...+++
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFIT  238 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCc
Confidence            999999999999888999999999999999865432    2233455666778888899999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |+++.+|||+++
T Consensus       239 g~~~~~~~g~~~  250 (250)
T TIGR03206       239 GQVLSVSGGLTM  250 (250)
T ss_pred             CcEEEeCCCccC
Confidence            999999999764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.4e-37  Score=244.24  Aligned_cols=201  Identities=25%  Similarity=0.354  Sum_probs=177.5

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+..+++|++||||||++|||                   +.+...+..++++..| +++.+.||+++.+++.++.++++
T Consensus        31 ~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   31 KPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             cchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHH
Confidence            367789999999999999999                   4445556666666664 89999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      ++. |.+|+||||||+.. ..++.+.+++++++.+++|+.++++.+++++|.|.+.+.|+||.++|.+|..+.++...|+
T Consensus       110 ~e~-G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Yc  187 (300)
T KOG1201|consen  110 KEV-GDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYC  187 (300)
T ss_pred             Hhc-CCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhh
Confidence            999 89999999999987 7888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHc---cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          151 ATKGAMNQLAKNLACEWA---RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~---~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +||+|+.+|+++|+.|+.   .+||+...++|+.++|.|.....+.+          .+....+|+.+|+.++.-+
T Consensus       188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~----------~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP----------TLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc----------cccCCCCHHHHHHHHHHHH
Confidence            999999999999999985   46799999999999999987622211          2334567899999887766

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-36  Score=243.10  Aligned_cols=214  Identities=30%  Similarity=0.458  Sum_probs=178.6

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe--------------------eEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK--------------------VTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~--------------------~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+++|++|||||++|||     .++++.+.+.|.+                    +.++.+|+++.+++.+++++    
T Consensus         2 ~~~~~k~vlItGasggIG-----~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~----   72 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIG-----AAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK----   72 (237)
T ss_pred             CCCCCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH----
Confidence            357899999999999999     4444444433322                    34567899999888777653    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~  151 (251)
                      + +++|++|||+|... ..+..+.+.++|++.+++|+.+++.+++.++++|++  .+++|++||..+. .+.++...|++
T Consensus        73 ~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~  148 (237)
T PRK12742         73 S-GALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAA  148 (237)
T ss_pred             h-CCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHH
Confidence            4 78999999999875 455667889999999999999999999999999964  3899999998884 56778899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|++++.++++++.++.++||+||.|+||+++|++.....   ...+......|.+++.+|+|+|+.+.||+++.++++|
T Consensus       149 sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~  225 (237)
T PRK12742        149 SKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVT  225 (237)
T ss_pred             hHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCccc
Confidence            9999999999999999999999999999999999865422   2233344556888999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 041276          232 GQTICVDGGFT  242 (251)
Q Consensus       232 G~~i~vdgG~~  242 (251)
                      |+.|.+|||+.
T Consensus       226 G~~~~~dgg~~  236 (237)
T PRK12742        226 GAMHTIDGAFG  236 (237)
T ss_pred             CCEEEeCCCcC
Confidence            99999999974

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=246.91  Aligned_cols=225  Identities=24%  Similarity=0.352  Sum_probs=192.8

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKC--FKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +|++|||||+++||                   +...++...+.+....  .++.++.+|+++.++++++++++.+.+ +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            68999999999999                   3344455555554432  468899999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|++++ .++||++||.++..+.+....|++||+
T Consensus        81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         81 RVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            9999999999876 56778899999999999999999999999999998876 689999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcc-cCCCCCCCCC---------CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFI-TTPLTEPYLS---------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      |+++++++++.|++++||+|+.|+||++ .+++.....+         .++..+.+....|.+++.+|+|+++.+++|++
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~  239 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYAS  239 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999975 6666543221         23444455567889999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 041276          225 PAASYITGQTICVDGGFTV  243 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~  243 (251)
                      +.+.+++|+.+.+|||..+
T Consensus       240 ~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        240 PKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             cccccccCceEEEcCCEEe
Confidence            8889999999999999864

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-36  Score=244.67  Aligned_cols=226  Identities=33%  Similarity=0.525  Sum_probs=194.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +...++...+.+...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~-   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF-   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            47899999999999999                   3344445555555555678889999999999999999999988 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH-HHhCCCceEEEecccccccCCCC----Chhh
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL-LKASGAGNIILVSSVCGVLSTNL----GTIY  149 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-m~~~~~g~iv~vss~~~~~~~~~----~~~Y  149 (251)
                      +++|++|||+|... ..+..+.+.+.|++.+++|+.+++.+++++.++ |.+++.+++|++||..+..+.+.    ...|
T Consensus        88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         88 GHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence            79999999999765 556677889999999999999999999999998 77777789999999887766543    4889


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +++|++++.++++++.++.++||+++.++||+++|++.+...  +...+......|..++++|+|+|+.+.+|+++.+.+
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  244 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKH  244 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999999876543  233444556778888999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      ++|+.+.+|||+++
T Consensus       245 ~~G~~~~~~~~~~~  258 (259)
T PRK08213        245 ITGQILAVDGGVSA  258 (259)
T ss_pred             ccCCEEEECCCeec
Confidence            99999999999763

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=247.21  Aligned_cols=226  Identities=29%  Similarity=0.403  Sum_probs=189.6

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||++|||                   +...+ +..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            468899999999999999                   22223 4455555556678899999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|... .....+.. ++|++.+++|+.+++.+++.+.|+|++.. ++||++||..+..+.+.+..|++||
T Consensus        82 -~~id~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         82 -GRIDGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             -CCCCEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-cEEEEECCHHhccCCCCCchhHHHH
Confidence             89999999999754 33444444 99999999999999999999999998654 8999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---CC-HHHHHHHhhCCCCC-CCCCHHHHHHHHHHHcCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---SD-EKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~~-~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +++++++++++.|+.++||+++.|+||+++|++.+...   .. ...........|.+ ++.+|+|+|+.+++++++.+.
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  237 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSS  237 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhc
Confidence            99999999999999999999999999999999864321   11 22233344455654 788999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      +.+|+.+.+|||.+.
T Consensus       238 ~~~g~~~~~~gg~~~  252 (258)
T PRK08628        238 HTTGQWLFVDGGYVH  252 (258)
T ss_pred             cccCceEEecCCccc
Confidence            999999999999754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-36  Score=242.80  Aligned_cols=221  Identities=29%  Similarity=0.418  Sum_probs=188.1

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |++|||||++|||                    +.+.++...+.+...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            7999999999999                    2344445555555555678899999999999999999999988 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCC-ChhhHHhH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNL-GTIYAATK  153 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~-~~~Y~~sK  153 (251)
                      |++|||||......++.+.+.++++..+++|+.+++.+++.+++.|..++   .++||++||.++..+.+. +..|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            99999999876455677889999999999999999999999999987653   478999999998887664 56899999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.++++++.++.++||+|+.|+||+++|++.... ..++.........|.++..+|+|+|+.+++|+++.+.+++|+
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~  240 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGA  240 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCc
Confidence            9999999999999999999999999999999986532 223333344456677888999999999999999999999999


Q ss_pred             EEEeCCC
Q 041276          234 TICVDGG  240 (251)
Q Consensus       234 ~i~vdgG  240 (251)
                      .|.+|||
T Consensus       241 ~~~~~gg  247 (248)
T PRK06947        241 LLDVGGG  247 (248)
T ss_pred             eEeeCCC
Confidence            9999998

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9.1e-36  Score=242.07  Aligned_cols=225  Identities=29%  Similarity=0.494  Sum_probs=194.2

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+++|+++||||++|||                    +...+++..+.+.+.+.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999                    234444555666666668899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||||... ...+.+.+.+.+++.+++|+.+++.+++.++|+|.+++.+++|++||..+..+.+++..|+++
T Consensus        82 ~-~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  159 (247)
T PRK12935         82 F-GKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAA  159 (247)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHH
Confidence            9 89999999999875 556678889999999999999999999999999988777899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.++.+.||+++.++||+++|++....  .+..........+..++..|+|+++++++++.. ..+++|
T Consensus       160 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g  236 (247)
T PRK12935        160 KAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITG  236 (247)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccC
Confidence            99999999999999998999999999999999986643  233334444556777889999999999999975 458999


Q ss_pred             cEEEeCCCcc
Q 041276          233 QTICVDGGFT  242 (251)
Q Consensus       233 ~~i~vdgG~~  242 (251)
                      +.+.+|||..
T Consensus       237 ~~~~i~~g~~  246 (247)
T PRK12935        237 QQLNINGGLY  246 (247)
T ss_pred             CEEEeCCCcc
Confidence            9999999974

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-36  Score=242.90  Aligned_cols=222  Identities=31%  Similarity=0.461  Sum_probs=187.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+++|+++||||++|||                   +.+.+++..+++   +.++.++.+|+++.+++.++++.+.+.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            46789999999999999                   111222222222   3467788999999999999999999998 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++.|+|++.  +++|+++|.++..+.+....|+++|+
T Consensus        79 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~i~~~S~~~~~~~~~~~~Y~~sK~  155 (249)
T PRK06500         79 GRLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP--ASIVLNGSINAHIGMPNSSVYAASKA  155 (249)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechHhccCCCCccHHHHHHH
Confidence            89999999999875 5667788999999999999999999999999998653  78999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-C---CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-S---DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +++.++++++.|+.++||+++.|+||+++|++.+... .   .+.....+....|..+..+|+|+|+++++|+++.+.++
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  235 (249)
T PRK06500        156 ALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFI  235 (249)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999865421 1   12333445556788888999999999999999888999


Q ss_pred             cccEEEeCCCcc
Q 041276          231 TGQTICVDGGFT  242 (251)
Q Consensus       231 ~G~~i~vdgG~~  242 (251)
                      +|+.|.+|||.+
T Consensus       236 ~g~~i~~~gg~~  247 (249)
T PRK06500        236 VGSEIIVDGGMS  247 (249)
T ss_pred             cCCeEEECCCcc
Confidence            999999999964

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.3e-35  Score=240.67  Aligned_cols=223  Identities=30%  Similarity=0.454  Sum_probs=192.4

Q ss_pred             CEEEEecCCCCcC-------------------c-HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG-------------------N-EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG-------------------~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |++|||||++|||                   + .+...+....+...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            7899999999999                   1 111112222222234468889999999999999999999998 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++|||+|... ..++.+.+.+.|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+++|+|+.
T Consensus        82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         82 DILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            99999999875 56677889999999999999999999999999999888899999999999998889999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      .++++++.++.++|++++.++||++.|++.+...  +.....+....|.++..+++|+++.+.+|+++.+.+++|+.+.+
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~  238 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQMG--PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISI  238 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEE
Confidence            9999999999999999999999999999876543  34445556677888889999999999999998888999999999


Q ss_pred             CCCcccc
Q 041276          238 DGGFTVN  244 (251)
Q Consensus       238 dgG~~~~  244 (251)
                      |||+.|+
T Consensus       239 ~~g~~~~  245 (245)
T PRK12824        239 NGGLYMH  245 (245)
T ss_pred             CCCeecC
Confidence            9999874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.3e-35  Score=240.72  Aligned_cols=222  Identities=32%  Similarity=0.443  Sum_probs=190.5

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++|++|||||++|||     .++++.+.+.                     +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG-----~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          2 FDLSGRKALVTGASGGIG-----EEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             cCCCCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            457889999999999999     3333332221                     23567889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|++|||||... ..+..+.+.+++++.+++|+.+++.+++.+.+.|++++.++||++||..+..+.+....|++
T Consensus        77 ~~-~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  154 (245)
T PRK12936         77 DL-EGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCA  154 (245)
T ss_pred             Hc-CCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHH
Confidence            98 89999999999876 55667788899999999999999999999999988777799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|+++..+++.++.++.+.|++++.|+||+++|++.....  +...+......|..++.+|+|+++.+.+|+++...+++
T Consensus       155 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~  232 (245)
T PRK12936        155 SKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN--DKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVT  232 (245)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC--hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            9999999999999999999999999999999999875532  22233344567888889999999999999998888999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |+.+.+|||+.+
T Consensus       233 G~~~~~~~g~~~  244 (245)
T PRK12936        233 GQTIHVNGGMAM  244 (245)
T ss_pred             CCEEEECCCccc
Confidence            999999999764

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-36  Score=250.11  Aligned_cols=219  Identities=21%  Similarity=0.268  Sum_probs=186.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+.++++|++|||||++|||                   +.+.++++.+++.. +.++..+.+|++|.++++++++++.+
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34568899999999999999                   34445555555432 34566778999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|.+++ |+||++||.++..+.+....|++
T Consensus        82 ~~-g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  158 (296)
T PRK05872         82 RF-GGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCA  158 (296)
T ss_pred             Hc-CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHhhcCCCCCchHHHH
Confidence            98 89999999999876 67788899999999999999999999999999998754 89999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC--CCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR--TPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ||++++.|+++++.|+.++||+|+.++||+++|++.+...........+...  .|.++..+|+|+|+.++++++....+
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~  238 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARR  238 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCE
Confidence            9999999999999999999999999999999999987654432333333333  36678899999999999999988887


Q ss_pred             cccc
Q 041276          230 ITGQ  233 (251)
Q Consensus       230 ~~G~  233 (251)
                      ++|+
T Consensus       239 i~~~  242 (296)
T PRK05872        239 VYAP  242 (296)
T ss_pred             EEch
Confidence            7775

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=241.61  Aligned_cols=222  Identities=30%  Similarity=0.363  Sum_probs=189.8

Q ss_pred             CCCCCEEEEecCCC--CcC-------------------c-----------HHHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 041276           14 SLQGMTALVTGGTK--GLG-------------------N-----------EAELNECLREWKTKCFKVTGSVCDASSRAE   61 (251)
Q Consensus        14 ~l~~k~vlItGas~--giG-------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   61 (251)
                      .+++|++|||||++  |||                   +           ......+.+.+...+.++.++.+|+++.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            56889999999994  999                   1           011111333344445678899999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL  141 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~  141 (251)
                      ++++++++.+.+ +++|+||||||... ..+..+.+.+++++.+++|+.+++.+++++.+.|.++..++||++||..+..
T Consensus        82 ~~~~~~~~~~~~-g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERL-GDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhC-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            999999999999 89999999999865 5677788999999999999999999999999999887778999999999988


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      +.++...|+++|+|++.++++++.|+..+||+|+.++||+++|++..     +..........+..+..+|+|+|+.+.|
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~  234 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFPQGRVGEPVDAARLIAF  234 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCCCCCCcCHHHHHHHHHH
Confidence            88888999999999999999999999999999999999999998753     2233334445677778899999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcc
Q 041276          222 LCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      |+++.+.+++|+.+.+|||+.
T Consensus       235 l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        235 LVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HhCcccccccCCEEEecCCcc
Confidence            999999999999999999974

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-36  Score=246.39  Aligned_cols=218  Identities=22%  Similarity=0.277  Sum_probs=186.8

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHH-------HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEA-------ELNECLREWKTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      +.+++|++|||||++|||                   +..       .+++..+++...+.++.++.+|+++++++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            457889999999999999                   111       244555666666677889999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--C
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--N  144 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--~  144 (251)
                      +++.+.+ +++|++|||||... ..+..+.+.++|++.+++|+.+++.+++++.|+|++++.|+|++++|..+..+.  +
T Consensus        82 ~~~~~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         82 AKAVERF-GGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHh-CCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            9999998 89999999999865 566778899999999999999999999999999998877999999999888776  7


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecC-cccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW-FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ++..|++||+|++.++++++.|+.++||+||+|+|| +++|++.+.....         ..+..+..+|+++|+.+++|+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~---------~~~~~~~~~p~~va~~~~~l~  230 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG---------DEAMRRSRTPEIMADAAYEIL  230 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc---------cccccccCCHHHHHHHHHHHh
Confidence            889999999999999999999999999999999999 6888865543221         124456789999999999999


Q ss_pred             CCCCCCccccEEEeCCCcc
Q 041276          224 MPAASYITGQTICVDGGFT  242 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~  242 (251)
                      ++...++||+.+ +|++..
T Consensus       231 ~~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        231 SRPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             cCccccceeEEE-eccchh
Confidence            998889999988 677654

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=243.01  Aligned_cols=229  Identities=28%  Similarity=0.381  Sum_probs=197.3

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++++|++|||||+++||                   +.+.++...+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999                   233444444444433  246788899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||+|......+..+.+.+++...+++|+.+++.+++.+.++|.+++.++|+++||..+..+.+....|+++
T Consensus        84 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         84 H-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             c-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence            8 899999999997643456677889999999999999999999999999988777899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.++...+|+++.|+||+++|++.......+..........|..++..|+|+|+++++|++....+++|
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  242 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITG  242 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence            99999999999999999999999999999999988665444444444555677888899999999999999988889999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.+.+|||..+
T Consensus       243 ~~~~~~~g~~~  253 (276)
T PRK05875        243 QVINVDGGHML  253 (276)
T ss_pred             CEEEECCCeec
Confidence            99999999876

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-36  Score=243.52  Aligned_cols=224  Identities=27%  Similarity=0.441  Sum_probs=179.7

Q ss_pred             cCCCCCEEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..+++|++|||||++|||                       +.+.+++..+++...+.++.++.+|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            346789999999999999                       112333444445444556788999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEe-cccccccCCCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV-SSVCGVLSTNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~v-ss~~~~~~~~~~~~  148 (251)
                      .+.+ +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.|+|++.  ++++++ +|..+ .+.+.+..
T Consensus        84 ~~~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~-~~~~~~~~  158 (257)
T PRK12744         84 KAAF-GRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLG-AFTPFYSA  158 (257)
T ss_pred             HHhh-CCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhc-ccCCCccc
Confidence            9988 89999999999865 5667788999999999999999999999999999754  677776 44434 34567889


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH---HHhhCCCCC--CCCCHHHHHHHHHHHc
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE---EVKCRTPME--RPGEPKEVSSLVAFLC  223 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~dva~~~~~l~  223 (251)
                      |++||+|++.|+++++.|+.++||+|+.++||++.|++..+.... +...   ......+..  ++.+|+|+|+.+.+|+
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (257)
T PRK12744        159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA-EAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLV  237 (257)
T ss_pred             chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc-chhhcccccccccccccCCCCCHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999976442221 1111   111122333  6789999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 041276          224 MPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++ ..+++|+.+.+|||+.+
T Consensus       238 ~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        238 TD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             cc-cceeecceEeecCCccC
Confidence            85 67899999999999765

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=238.85  Aligned_cols=222  Identities=27%  Similarity=0.376  Sum_probs=189.3

Q ss_pred             CCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           17 GMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        17 ~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +|++|||||++|||                    +.+.+....+.+...+.++.++.+|+++.++++++++++.+.+ ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence            57999999999999                    2233444445555445567889999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCC-ChhhHHh
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNL-GTIYAAT  152 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~-~~~Y~~s  152 (251)
                      +|+||||||......++.+.+.++|++.+++|+.+++.+++.+++.|+++.   .|+||++||.++..+.+. +..|+++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            999999999875445677889999999999999999999999999997652   478999999998888776 4679999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.++.++||+++.|+||++.|++..... .+..........|.++..+|+|+++.+++|+++...+++|
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g  239 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTG  239 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            999999999999999999999999999999999865432 3344445566778888899999999999999988889999


Q ss_pred             cEEEeCCC
Q 041276          233 QTICVDGG  240 (251)
Q Consensus       233 ~~i~vdgG  240 (251)
                      +.+.+|||
T Consensus       240 ~~~~~~gg  247 (248)
T PRK06123        240 TFIDVSGG  247 (248)
T ss_pred             CEEeecCC
Confidence            99999997

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-35  Score=265.63  Aligned_cols=226  Identities=33%  Similarity=0.527  Sum_probs=191.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..++|++|||||++|||     .++++.+.+.                     +.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~k~~lITGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIG-----RAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            35789999999999999     3333333222                     345667899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCc-eEEEecccccccCCCCChhhH
Q 041276           73 FNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      + +++|+||||||+..+ ..++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||.++..+.+.+..|+
T Consensus        77 ~-g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~  155 (520)
T PRK06484         77 F-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYS  155 (520)
T ss_pred             h-CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHH
Confidence            9 899999999998532 3466788999999999999999999999999999876655 999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH-HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK-FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++|+|+.+|+++++.|+.++||+|+.|+||+++|++......... .........|.++..+|+|+|+.+.+|+++.+.+
T Consensus       156 asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~  235 (520)
T PRK06484        156 ASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASY  235 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999998765432211 1233344567888889999999999999999999


Q ss_pred             ccccEEEeCCCccccc
Q 041276          230 ITGQTICVDGGFTVNG  245 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~  245 (251)
                      ++|+.+.+|||+....
T Consensus       236 ~~G~~~~~~gg~~~~~  251 (520)
T PRK06484        236 ITGSTLVVDGGWTVYG  251 (520)
T ss_pred             ccCceEEecCCeeccc
Confidence            9999999999986543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=4.2e-35  Score=237.26  Aligned_cols=222  Identities=31%  Similarity=0.449  Sum_probs=192.7

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |++|||||++|||                    +...+++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            7899999999999                    1222333333444344578889999999999999999999998 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+||||+|... ...+.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+++..|+++|+++.
T Consensus        80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        80 DVLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             cEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            99999999875 55677889999999999999999999999999999888789999999999988888999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      .++++++.++.+.|++++.++||++.|++.....  +.....+....|..+..+|+|+++.+.+|++++..+++|+.|.+
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~  236 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSI  236 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEe
Confidence            9999999999999999999999999999876542  34455555667888899999999999999998888999999999


Q ss_pred             CCCccc
Q 041276          238 DGGFTV  243 (251)
Q Consensus       238 dgG~~~  243 (251)
                      |||.++
T Consensus       237 ~gg~~~  242 (242)
T TIGR01829       237 NGGLYM  242 (242)
T ss_pred             cCCccC
Confidence            999764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=237.99  Aligned_cols=203  Identities=17%  Similarity=0.188  Sum_probs=173.9

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|+++||||++|||                   +.++++++.+++.+.+.++..+.+|++++++++++++++.+++ 
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF-   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            57899999999999999                   5566777777777667778889999999999999999999999 


Q ss_pred             C-CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHh
Q 041276           75 G-KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        75 ~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + ++|++|||+|......++.+.+.++|.+.+++|+.+++.+++.++|+|++++ .|+||++||..+.   +.+..|+++
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~as  157 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESS  157 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHH
Confidence            7 8999999998665456788899999999999999999999999999998764 6899999997653   567889999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+.+|+++++.|++++||+||.|+||+++|+...    .++.++..           .+|++.+..||++  +.++||
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----~~~~~~~~-----------~~~~~~~~~~l~~--~~~~tg  220 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----DAVHWAEI-----------QDELIRNTEYIVA--NEYFSG  220 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----CHHHHHHH-----------HHHHHhheeEEEe--cccccc
Confidence            999999999999999999999999999999998321    22323222           1799999999996  779999


Q ss_pred             cEEEe
Q 041276          233 QTICV  237 (251)
Q Consensus       233 ~~i~v  237 (251)
                      +.|.-
T Consensus       221 ~~~~~  225 (227)
T PRK08862        221 RVVEA  225 (227)
T ss_pred             eEEee
Confidence            98864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.4e-35  Score=242.47  Aligned_cols=221  Identities=26%  Similarity=0.345  Sum_probs=177.2

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHH----HHHHHHHHHh
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAER----EKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~----~~~~~~i~~~   72 (251)
                      ++++||||++|||                    +.++++++.+++... +.++.++.+|++|.+++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            6899999999999                    234555555555432 34677889999999855    5666676777


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCH-----------HHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCceEEEec
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMA-----------EDLSFLMSTNFESAYHLSQLAHPLLKAS------GAGNIILVS  135 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~~g~iv~vs  135 (251)
                      + +++|+||||||... ..++.+.+.           ++|.+++++|+.+++.+++.++|+|+..      ..++|++++
T Consensus        82 ~-g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 F-GRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             c-CCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            8 79999999999765 333333322           3689999999999999999999999643      246899999


Q ss_pred             ccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC-CCCCHHH
Q 041276          136 SVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-RPGEPKE  214 (251)
Q Consensus       136 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d  214 (251)
                      |..+..+.+++..|++||+|+++|+++++.|+.++||+|+.|+||++.++...   . ....+.+....|.. +..+|+|
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---P-FEVQEDYRRKVPLGQREASAEQ  235 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---c-hhHHHHHHHhCCCCcCCCCHHH
Confidence            99999888899999999999999999999999999999999999999876321   1 22223333445664 6789999


Q ss_pred             HHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          215 VSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       215 va~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++.+++|+++.+++++|+.+.+|||+++.
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       236 IADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHHhCcccCCcccceEEECCceecc
Confidence            999999999999999999999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=9.5e-36  Score=243.36  Aligned_cols=217  Identities=23%  Similarity=0.261  Sum_probs=177.9

Q ss_pred             EEEEecCCCCcC-----------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           19 TALVTGGTKGLG-----------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        19 ~vlItGas~giG-----------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++|||||++|||                       +.+.++++.+++...  +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            699999999999                       123334444445431  3468889999999999999999998876


Q ss_pred             CCC----ccEEEEcccCCCCCC-CCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccCCCC
Q 041276           74 NGK----LNILINNVGTNYTTK-PTVE-YMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        74 ~~~----id~lv~~ag~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~  145 (251)
                       ++    .|+||||||...... ...+ .+.++|++.+++|+.+++.+++.++|+|++++  .++||++||.++..+.+.
T Consensus        82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence             44    369999999754222 2333 35789999999999999999999999998753  479999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---SDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      +..|++||+|++.|+++++.|++++||+||+|+||+++|+|.+...   ..++..+.+....|.+++.+|+|+|+.+++|
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999875432   1234445556667889999999999999999


Q ss_pred             cCCCCCCccccEEEe
Q 041276          223 CMPAASYITGQTICV  237 (251)
Q Consensus       223 ~~~~~~~~~G~~i~v  237 (251)
                      ++ +++++||+.++.
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            96 578999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.1e-35  Score=239.40  Aligned_cols=221  Identities=29%  Similarity=0.393  Sum_probs=183.1

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++|++|||||++|||                   +.+.++++.+++...  +..+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999                   334455555555432  2245667999999999999999999998


Q ss_pred             CCCccEEEEcccCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-------
Q 041276           74 NGKLNILINNVGTNYT--TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-------  144 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-------  144 (251)
                       +++|++|||||....  ..++.+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+..       
T Consensus        82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence             899999999986421  3456788999999999999999999999999999988888999999987754321       


Q ss_pred             ---CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          145 ---LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       145 ---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                         ....|++||+++++++++++.|+.++||+|+.++||++.++..      ......+....+..++.+|+|+|+.+++
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCCccCCCCHHHhhhhHhh
Confidence               2246999999999999999999999999999999999887642      2334444455667788999999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcc
Q 041276          222 LCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      ++++.+.+++|+.+.+|||+.
T Consensus       235 l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        235 LLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eeccccccccCceEEecCCcc
Confidence            999989999999999999975

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.5e-35  Score=239.05  Aligned_cols=222  Identities=30%  Similarity=0.462  Sum_probs=190.0

Q ss_pred             EEEecCCCCcC-------------------c-HHHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           20 ALVTGGTKGLG-------------------N-EAELNECLREWKTKC--FKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        20 vlItGas~giG-------------------~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ++||||++|||                   + .+.++++.+.+....  ..+..+.+|++++++++++++++.+.+ +++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence            89999999999                   2 344445555554332  234568899999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||.++..+.+.+..|+++|+++.
T Consensus        81 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         81 SVLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             cEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999999876 56677889999999999999999999999999999887899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCC--eEEEEEecCcccCCCCCCCC---CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          158 QLAKNLACEWARDN--IRINSVAPWFITTPLTEPYL---SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       158 ~~~~~la~e~~~~~--i~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      .++++++.|+.+++  |+|+.|+||+++|++.....   ..++....+....|.+++.+|+|+|+.+++|+++.+.++||
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  239 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTG  239 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999997664  99999999999999875432   23344455556678888999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.|.+|||.+.
T Consensus       240 ~~i~~~~g~~~  250 (251)
T PRK07069        240 AELVIDGGICA  250 (251)
T ss_pred             CEEEECCCeec
Confidence            99999999653

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-35  Score=237.17  Aligned_cols=228  Identities=29%  Similarity=0.452  Sum_probs=193.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++++|++|||||+++||                   +.+.+.+..+.+. .+.++.++.+|++|+++++++++++.+.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999                   2222333333333 24467889999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||+|... ...+.+.+.+++++.+++|+.+++.+++.++++|++++.++|+++||..+..+.+....|+.+|
T Consensus        80 -~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  157 (252)
T PRK06138         80 -GRLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASK  157 (252)
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHH
Confidence             89999999999876 5667788999999999999999999999999999988889999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++++.++++++.|+...|++++.++||++.|++......    .+..........+..++.+++|+|+.+++++.+...+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  237 (252)
T PRK06138        158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSF  237 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999998765432    1222233334456667889999999999999988899


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      .+|+.+.+|||++.
T Consensus       238 ~~g~~~~~~~g~~~  251 (252)
T PRK06138        238 ATGTTLVVDGGWLA  251 (252)
T ss_pred             ccCCEEEECCCeec
Confidence            99999999999764

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-35  Score=237.96  Aligned_cols=223  Identities=27%  Similarity=0.432  Sum_probs=186.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+++|+|+||||++|||     ..+++.+.+.|.                   ...++.+|++++++++++++++.+.+ 
T Consensus         4 ~~~~~~vlItGasggIG-----~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (255)
T PRK06057          4 RLAGRVAVITGGGSGIG-----LATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETY-   77 (255)
T ss_pred             cCCCCEEEEECCCchHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            37899999999999999     333333332221                   12467899999999999999999988 


Q ss_pred             CCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-CCChhhHHh
Q 041276           75 GKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-NLGTIYAAT  152 (251)
Q Consensus        75 ~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~~~~Y~~s  152 (251)
                      +++|++|||||...+ ..++.+.+.+.+++.+++|+.+++.+++.++|+|++++.++||++||..+..+. +++..|+++
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s  157 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS  157 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence            899999999997642 245667889999999999999999999999999998777999999998877765 367789999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      |+++..++++++.++.++||+++.|+||+++|++...... .+....+.....|.+++.+|+|+++++.+|+++.+.+++
T Consensus       158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  237 (255)
T PRK06057        158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFIT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999998765432 222223333456788899999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 041276          232 GQTICVDGGFT  242 (251)
Q Consensus       232 G~~i~vdgG~~  242 (251)
                      |+.+.+|||+.
T Consensus       238 g~~~~~~~g~~  248 (255)
T PRK06057        238 ASTFLVDGGIS  248 (255)
T ss_pred             CcEEEECCCee
Confidence            99999999975

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-35  Score=239.29  Aligned_cols=228  Identities=26%  Similarity=0.386  Sum_probs=193.5

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||+++||                   +....++..+.+...+.++.++.+|+++.++++++++.+.+.+ 
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   82 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF-   82 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            46789999999999999                   3444555666666556678889999999999999999999988 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHH-HhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLL-KASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m-~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      +++|++|||+|... ..+..+.+.++++..+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++|
T Consensus        83 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk  161 (262)
T PRK13394         83 GSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAK  161 (262)
T ss_pred             CCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence            89999999999875 5666778899999999999999999999999999 766778999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---------HHHHH-HHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---------EKFLE-EVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +++..+++.++.++.+.+|+++.++||++.|++.......         ++... .+....+..++.+++|+++++++++
T Consensus       162 ~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~  241 (262)
T PRK13394        162 HGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS  241 (262)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999998999999999999999975433211         11111 2223456678899999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 041276          224 MPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +.....++|+.+.+|||+.+
T Consensus       242 ~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        242 SFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             CccccCCcCCEEeeCCceec
Confidence            98778899999999999865

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=236.06  Aligned_cols=228  Identities=29%  Similarity=0.423  Sum_probs=194.0

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .++++|+++||||++|||                    +.+.+++..+.+...+.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            357789999999999999                    233344444555444556888999999999999999999887


Q ss_pred             cC-----CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           73 FN-----GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        73 ~~-----~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++     +++|++||+||... .....+.+.+.|+..+++|+.+++.+++.++++|.+.  +++|++||..+..+.+++.
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~  158 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSI  158 (254)
T ss_pred             hccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCc
Confidence            61     36999999999865 5667788999999999999999999999999998654  7999999999998888999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .|+++|++++.++++++.++.++|++++.++||++.|++.+.....+..........+.++..+++|+|+.+.+++++.+
T Consensus       159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  238 (254)
T PRK12746        159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDS  238 (254)
T ss_pred             chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999999987665555555544556677788899999999999999888


Q ss_pred             CCccccEEEeCCCccc
Q 041276          228 SYITGQTICVDGGFTV  243 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~  243 (251)
                      .+++|+.+.++||+.+
T Consensus       239 ~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        239 RWVTGQIIDVSGGFCL  254 (254)
T ss_pred             CCcCCCEEEeCCCccC
Confidence            8899999999999753

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=235.50  Aligned_cols=228  Identities=25%  Similarity=0.348  Sum_probs=193.7

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      |.++++|++|||||++|||                   +...+..+.+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3457889999999999999                   233444555555554556788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           73 FNGKLNILINNVGTNYT--TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      + +++|+||||||....  ..++.+.+.+.+++.+++|+.+++.++++++|+|.+.+.++||++||.++..   +...|+
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~  156 (250)
T PRK07774         81 F-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYG  156 (250)
T ss_pred             h-CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccH
Confidence            8 799999999998641  3456778899999999999999999999999999887779999999988754   356799


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||++++.+++++++++.+.||+++.++||+++|++.+...+ +........+.+..+..+|+|+|+.+++++++.....
T Consensus       157 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~  235 (250)
T PRK07774        157 LAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWI  235 (250)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCc
Confidence            999999999999999999999999999999999999776543 3445555667777788899999999999998777778


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      +|+.+.+++|.++.
T Consensus       236 ~g~~~~v~~g~~~~  249 (250)
T PRK07774        236 TGQIFNVDGGQIIR  249 (250)
T ss_pred             CCCEEEECCCeecc
Confidence            99999999998875

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=236.66  Aligned_cols=228  Identities=26%  Similarity=0.361  Sum_probs=192.7

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+++|+++||||++|||                    +.+.+....+.+...+.++.++.+|+++++++.++++.+.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357889999999999999                    123333444445444557788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|++||++|... ..++.+.+.+.|+..+++|+.+++.+++.++++|.+++ .|++|++||.++..+.+....|++
T Consensus        82 ~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         82 F-GRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             h-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            8 79999999999875 55677889999999999999999999999999998764 589999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-----CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +|+++++++++++.|+...||+++.++||++.|++.....     ....+........|.++..+++|+|+.+++|+++.
T Consensus       160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChh
Confidence            9999999999999999999999999999999999753211     11233444445667788899999999999999988


Q ss_pred             CCCccccEEEeCCCcc
Q 041276          227 ASYITGQTICVDGGFT  242 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~  242 (251)
                      +.+++|+.|.+|||-.
T Consensus       240 ~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        240 SGLMTGSVIDFDQSVW  255 (260)
T ss_pred             hCCccCceEeECCccc
Confidence            8999999999999854

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=235.05  Aligned_cols=227  Identities=27%  Similarity=0.434  Sum_probs=195.0

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +++|++|||||+++||                   +.+.++...+++...+.++.++.+|++++++++++++++.+.+ +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5679999999999999                   3444555555665556678889999999999999999999998 7


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|++|||+|... ..+..+.+.+.++..+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|++
T Consensus        81 ~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         81 GVDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            9999999999876 566778899999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----------CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +..+++.++.++.+.||+++.++||++.|++......          .......+....+.+++.+++|+|+.+++|+.+
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  239 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF  239 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999998643211          111122333445667889999999999999988


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                      ....++|+.+.+|||+++
T Consensus       240 ~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        240 AAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             cccCccCCeEEeCCCEec
Confidence            888899999999999875

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=231.06  Aligned_cols=218  Identities=28%  Similarity=0.346  Sum_probs=188.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------EEEeccCCCHHHHHHHHHHHHHhcCCCccEEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------TGSVCDASSRAEREKLMKQVSSLFNGKLNILIN   82 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~   82 (251)
                      .+|+++||||++|||     ..+++.+.+.|.++             .++.+|+++.++++++++++.+.+  ++|++||
T Consensus         2 ~~k~vlItG~s~~iG-----~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~   74 (234)
T PRK07577          2 SSRTVLVTGATKGIG-----LALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIH--PVDAIVN   74 (234)
T ss_pred             CCCEEEEECCCCcHH-----HHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhC--CCcEEEE
Confidence            579999999999999     78888887776554             457899999999999999998875  6999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHH
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN  162 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~  162 (251)
                      |+|... ..++.+.+.+++++.+++|+.+++.+.+.++|.|++++.++||++||... .+.+....|+++|+++++++++
T Consensus        75 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~~~~~~  152 (234)
T PRK07577         75 NVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALVGCTRT  152 (234)
T ss_pred             CCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHHHHHHH
Confidence            999876 56677889999999999999999999999999999887899999999864 4667788999999999999999


Q ss_pred             HHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          163 LACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       163 la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      ++.|+.++||++++|+||++.|++.+.... .+..........+.++..+|+|+|+.+++|+++...+++|+.+.+|||.
T Consensus       153 ~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        153 WALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence            999999999999999999999998764432 1223333445667777889999999999999988889999999999996


Q ss_pred             c
Q 041276          242 T  242 (251)
Q Consensus       242 ~  242 (251)
                      .
T Consensus       233 ~  233 (234)
T PRK07577        233 S  233 (234)
T ss_pred             c
Confidence            5

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=243.71  Aligned_cols=206  Identities=24%  Similarity=0.301  Sum_probs=178.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++.+|+|||||||+|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            457889999999999999                   5566777777777777788899999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|++++.|+||+++|..+..+.+....|++||
T Consensus        83 -g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asK  160 (330)
T PRK06139         83 -GRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASK  160 (330)
T ss_pred             -CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHH
Confidence             89999999999876 6678899999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccC-CeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          154 GAMNQLAKNLACEWARD-NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~-~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +|+.+|+++++.|+.+. ||+|+.|+||+++|++........   .  ....+.....+|+++|+.+++++..
T Consensus       161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~---~--~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT---G--RRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc---c--ccccCCCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999874 999999999999999875321110   0  0112333467899999999998853

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-34  Score=231.74  Aligned_cols=222  Identities=26%  Similarity=0.382  Sum_probs=187.2

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++++++|+++||||++|||     ..+++.+.+.|.                   .+.++.+|+++.++++++++.    
T Consensus         4 ~~~~~~~~~lItGa~g~iG-----~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIG-----RACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH----
Confidence            4568899999999999999     344443333322                   244678999999988888765    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|++|||+|... ..+..+.+.+++++.+++|+.+++.+++++.+.+++++ .++||++||..+..+.+.+..|++
T Consensus        75 ~-~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  152 (245)
T PRK07060         75 A-GAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCA  152 (245)
T ss_pred             h-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHH
Confidence            3 78999999999875 55666788999999999999999999999999998664 489999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|++++.++++++.++.+.|++++.++||++.|++.+.....+.....+....|.+++.+++|+|+.+++++++.+.+++
T Consensus       153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~  232 (245)
T PRK07060        153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVS  232 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999999899999999999999998654444444444555567888899999999999999998889999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||.|.+|||++++
T Consensus       233 G~~~~~~~g~~~~  245 (245)
T PRK07060        233 GVSLPVDGGYTAR  245 (245)
T ss_pred             CcEEeECCCccCC
Confidence            9999999998753

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-34  Score=231.65  Aligned_cols=224  Identities=23%  Similarity=0.268  Sum_probs=187.5

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ++...+|++|||||++|||                    +...++.+.+++...+.++.++.+|++|.+++.++++++.+
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4456789999999999999                    22334455555555566788999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++.+.+.+++++.+++|+.+++.+++++.++|++...+++|+++|..+..+.+.+..|++
T Consensus        84 ~~-~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~  161 (258)
T PRK09134         84 AL-GPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTL  161 (258)
T ss_pred             Hc-CCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHH
Confidence            88 79999999999876 55677889999999999999999999999999998877789999999888777788889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||++++.++++++.++.+. |+|+.|+||++.|+...    ............+.++..+|+|+|++++++++  ..+++
T Consensus       162 sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~~  234 (258)
T PRK09134        162 SKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ----SPEDFARQHAATPLGRGSTPEEIAAAVRYLLD--APSVT  234 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCccc----ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcC
Confidence            9999999999999999765 99999999999887532    12222333445677788899999999999996  45689


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      |+.+.+|||..+.
T Consensus       235 g~~~~i~gg~~~~  247 (258)
T PRK09134        235 GQMIAVDGGQHLA  247 (258)
T ss_pred             CCEEEECCCeecc
Confidence            9999999997543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.6e-34  Score=231.00  Aligned_cols=224  Identities=29%  Similarity=0.437  Sum_probs=189.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++++++|||||++|||                   +..+++...+++...+.++.++.+|+++.++++++++.+.+.+ 
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF-   80 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            47799999999999999                   3344555555565556678889999999999999999999888 


Q ss_pred             CCccEEEEcccCCCCC-------CCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCC
Q 041276           75 GKLNILINNVGTNYTT-------KPT-VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~  145 (251)
                      +++|++|||+|.....       ... .+.+.+.++..+++|+.+++.+++.+++.|.++ ..+.|+++||.. ..+.+.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence            7999999999975421       111 567889999999999999999999999999876 457899998874 456778


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ...|+++|+|++.++++++.++.++||+++.++||+++|++....  .+...+.+....|.+++.+|+|+|+.+.+|+. 
T Consensus       160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-  236 (253)
T PRK08217        160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIE-  236 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc-
Confidence            899999999999999999999999999999999999999987654  34555666677788888999999999999995 


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                       +.+++|+.+.+|||+++
T Consensus       237 -~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        237 -NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             -CCCcCCcEEEeCCCccC
Confidence             46789999999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-34  Score=231.07  Aligned_cols=222  Identities=36%  Similarity=0.522  Sum_probs=189.2

Q ss_pred             CCCCCEEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ++.+|+++||||++|||                       +.+..+++.+++...+.++.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999                       1222333334444445567789999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHhCCCceEEEecccccccCCCCChhh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH-PLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      +.+ +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+. +.|++++.+++|++||..+..+.+++..|
T Consensus        83 ~~~-~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         83 EEF-GRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchh
Confidence            988 79999999999876 5677788999999999999999999999999 66776777899999999999988899999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +.+|++++.++++++.++.+.|++++.++||+++|++.......    .......|..++.+++|+|+.+++|+++...+
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPDEVAALVAFLVSDAASY  236 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999998999999999999999987654321    23344566777789999999999999988889


Q ss_pred             ccccEEEeCCCc
Q 041276          230 ITGQTICVDGGF  241 (251)
Q Consensus       230 ~~G~~i~vdgG~  241 (251)
                      ++|+.+.+|||+
T Consensus       237 ~~g~~~~~~~g~  248 (249)
T PRK12827        237 VTGQVIPVDGGF  248 (249)
T ss_pred             ccCcEEEeCCCC
Confidence            999999999996

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.2e-33  Score=229.24  Aligned_cols=227  Identities=33%  Similarity=0.502  Sum_probs=195.5

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||+++||                    .....+...+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999                    1122334444444445677888999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++||++|... .....+.+.+.+++.+++|+.+++.+.+.+.+++.+.+.+++|++||..+..+.+....|+++|
T Consensus        82 -~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         82 -GGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             -CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence             79999999999876 5666678899999999999999999999999999988778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.+++.++.++.+.|++++.++||++++++.+..  .+..........+.+++.+++|+|+.+.+|+.+...+++|+
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQ  237 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcccc
Confidence            9999999999999998999999999999999987654  23344455556677788899999999999998878889999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .+.+|||++|.
T Consensus       238 ~~~i~~~~~~~  248 (248)
T PRK05557        238 TLHVNGGMVMG  248 (248)
T ss_pred             EEEecCCccCC
Confidence            99999999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-33  Score=228.58  Aligned_cols=226  Identities=35%  Similarity=0.532  Sum_probs=193.5

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++.+|++|||||+++||                    +...+....+.+...+.++.++.+|+++++++.++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999                    1233333344444444568889999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++||++|... ..+..+.+.+.+++.+++|+.+++.+++.+.+.+++++.+++|++||..+..+.+....|+.+|
T Consensus        82 -~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         82 -GKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             -CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence             79999999999874 6677788999999999999999999999999999988889999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.++++++.++.+.|++++.++||+++|++.+....  ..........+..+..+++++++.+++++++....++|+
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE--EDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQ  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCc
Confidence            999999999999999899999999999999998876542  222333334566677899999999999999999999999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+|+|+++
T Consensus       238 ~~~~~~~~~~  247 (247)
T PRK05565        238 IITVDGGWTC  247 (247)
T ss_pred             EEEecCCccC
Confidence            9999999763

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=3e-34  Score=233.17  Aligned_cols=207  Identities=17%  Similarity=0.252  Sum_probs=176.0

Q ss_pred             CEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG------------------NEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |+++||||++|||                  +.++++++.+++++.+. .+.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCHGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCCC
Confidence            5799999999999                  45667777777776553 47889999999999999999999988 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      ++|||||... ..+..+.+.+.+.+.+++|+.+.+.+++.++|.|++++ .|+||++||.++..+.+.+..|+++|+|+.
T Consensus        80 ~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999865 33455677788899999999999999999999998764 589999999999999989999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      +|+++++.|++++||+||+++||+++|++.....+             .....+|+|+|+.++++++....   ++.+.+
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-------------~~~~~~pe~~a~~~~~~~~~~~~---~~~~~~  222 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-------------APMSVYPRDVAAAVVSAITSSKR---STTLWI  222 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-------------CCCCCCHHHHHHHHHHHHhcCCC---CceEEe
Confidence            99999999999999999999999999998654321             11125799999999999976432   567888


Q ss_pred             CCCcc
Q 041276          238 DGGFT  242 (251)
Q Consensus       238 dgG~~  242 (251)
                      +++..
T Consensus       223 ~~~~~  227 (246)
T PRK05599        223 PGRLR  227 (246)
T ss_pred             CccHH
Confidence            87764

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=229.82  Aligned_cols=196  Identities=27%  Similarity=0.319  Sum_probs=158.7

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      +++||||++|||     .++++.+.+.+.                   .+.++.+|++++++++++++++.    +++|+
T Consensus         2 ~vlItGas~giG-----~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~----~~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLG-----RTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP----HHLDT   72 (223)
T ss_pred             eEEEEeCCchHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence            589999999999     334433333221                   24567899999999999988763    26999


Q ss_pred             EEEcccCCCC---C--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           80 LINNVGTNYT---T--KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        80 lv~~ag~~~~---~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +|||+|....   .  .++.+ +.++|++.+++|+.+++.+++.++|+|++  .|+||+++|.+    .+....|++||+
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa  145 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA  145 (223)
T ss_pred             EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence            9999985321   1  12333 57899999999999999999999999975  38999999976    345678999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |+.+|+++++.|++++||+||+|+||+++|++....           ...|.   .+|+|+++.+.||+++.+.++||+.
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p~---~~~~~ia~~~~~l~s~~~~~v~G~~  211 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTPP---PVAAEIARLALFLTTPAARHITGQT  211 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCCC---CCHHHHHHHHHHHcCchhhccCCcE
Confidence            999999999999999999999999999999864321           11232   3899999999999999999999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      +.+|||...+
T Consensus       212 i~vdgg~~~~  221 (223)
T PRK05884        212 LHVSHGALAH  221 (223)
T ss_pred             EEeCCCeecc
Confidence            9999998765

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-33  Score=231.10  Aligned_cols=224  Identities=27%  Similarity=0.431  Sum_probs=189.2

Q ss_pred             CCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           17 GMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        17 ~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      .|++|||||++|||                    ....+++..+.++..+.++.++.+|+++++++.++++++.+.+ ++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            48999999999999                    1233344445555555678899999999999999999999998 89


Q ss_pred             ccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC------CceEEEecccccccCCCCChhh
Q 041276           77 LNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG------AGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        77 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~------~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      +|++|||+|.... ..++.+.+.+.|++.+++|+.+++.+++.+.+.|+++.      .++||++||..+..+.+....|
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  160 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY  160 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence            9999999998642 34567888999999999999999999999999998764      3579999999999998889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHh-hCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVK-CRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +.+|++++.++++++.++.++|++++.++||++.|++.....  +.....+. ...|..++.+|+|+++.+.+++++...
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~  238 (256)
T PRK12745        161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLP  238 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999999876542  22222222 245777888999999999999998888


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      +++|+.+.+|||+..
T Consensus       239 ~~~G~~~~i~gg~~~  253 (256)
T PRK12745        239 YSTGQAIHVDGGLSI  253 (256)
T ss_pred             ccCCCEEEECCCeec
Confidence            999999999999875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.8e-34  Score=249.30  Aligned_cols=224  Identities=25%  Similarity=0.326  Sum_probs=188.9

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe---------------------eEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK---------------------VTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~---------------------~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ...+++|++|||||++|||     ..+++.+.+.|.+                     ..++.+|+++.++++++++.+.
T Consensus       205 ~~~~~g~~vlItGasggIG-----~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        205 DRPLAGKVALVTGAARGIG-----AAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             ccCCCCCEEEEecCCCHHH-----HHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            3456899999999999999     4444444333222                     2457789999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|++|||||+.. ...+.+.+.+.|+..+++|+.+++.+++.+.+.+..++.++||++||.++..+.++...|+
T Consensus       280 ~~~-g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~  357 (450)
T PRK08261        280 ERH-GGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYA  357 (450)
T ss_pred             HhC-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHH
Confidence            988 79999999999876 6677788999999999999999999999999976656668999999999999998999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      ++|+++++|+++++.++.++||++|.|+||+++|++........  .+......+..+...|+|+|+++.||+++.+.++
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~--~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~i  435 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFAT--REAGRRMNSLQQGGLPVDVAETIAWLASPASGGV  435 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhH--HHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCC
Confidence            99999999999999999999999999999999999876542211  1112223456677899999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      ||+.|.+|||..+.
T Consensus       436 tG~~i~v~g~~~~~  449 (450)
T PRK08261        436 TGNVVRVCGQSLLG  449 (450)
T ss_pred             CCCEEEECCCcccC
Confidence            99999999998764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.5e-33  Score=257.30  Aligned_cols=232  Identities=24%  Similarity=0.333  Sum_probs=194.0

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +....+++|++|||||++|||                   +.+.++...+.+...  ...+..+.+|+++++++++++++
T Consensus       407 ~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            344568899999999999999                   333444444444432  13567889999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCCh
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~  147 (251)
                      +.+.+ +++|++|||||... ..++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||.++..+.++..
T Consensus       487 i~~~~-g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~  564 (676)
T TIGR02632       487 VALAY-GGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNAS  564 (676)
T ss_pred             HHHhc-CCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCH
Confidence            99999 89999999999865 56777889999999999999999999999999998875 57999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC--CCCCCC----------CCHHHHHHHhhCCCCCCCCCHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP--LTEPYL----------SDEKFLEEVKCRTPMERPGEPKEV  215 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dv  215 (251)
                      .|++||++++.++++++.|++++||+||+|+||.+.++  +.....          ..++..+.+..+.++++..+|+|+
T Consensus       565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDV  644 (676)
T TIGR02632       565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADI  644 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHH
Confidence            99999999999999999999999999999999998643  322110          122333445667888999999999


Q ss_pred             HHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          216 SSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       216 a~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      |+++++|+++.+.++||+.|.+|||+..
T Consensus       645 A~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       645 AEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHHHhCCcccCCcCcEEEECCCchh
Confidence            9999999998888999999999999754

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=229.08  Aligned_cols=215  Identities=23%  Similarity=0.257  Sum_probs=179.8

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCCC--HHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDASS--RAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~~--~~~~~~~~~~i~   70 (251)
                      ..+++|+++||||++|||                   +.+.+++..+++.+.+ ..+.++.+|+++  .++++++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            457889999999999999                   3444445555554332 356678899975  578999999998


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+.+++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+++++++|..+..+.+.+..|+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            87745899999999976534577889999999999999999999999999999988779999999999999988889999


Q ss_pred             HhHHHHHHHHHHHHHHHccC-CeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          151 ATKGAMNQLAKNLACEWARD-NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~-~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +||++++.|+++++.|+.++ +|+|+.|+||+++|++.......+.          .....+++|+++.+.|++++.+.+
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  231 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAESKG  231 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999876 6999999999999998765432211          112458999999999999999999


Q ss_pred             ccccEEEe
Q 041276          230 ITGQTICV  237 (251)
Q Consensus       230 ~~G~~i~v  237 (251)
                      +||++|.|
T Consensus       232 ~~g~~~~~  239 (239)
T PRK08703        232 RSGEIVYL  239 (239)
T ss_pred             cCCeEeeC
Confidence            99999875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=2.1e-35  Score=225.70  Aligned_cols=218  Identities=27%  Similarity=0.357  Sum_probs=179.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++.||.|++||+.||||                   +.+. .++..+|++.  ...+.|+++|+++..+++++++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            467899999999999999                   1122 2333444443  24788999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCCChh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~  148 (251)
                      ++ |.+|++||+||+..         +.+|++.+.+|+.+.++-+...+|+|.++.   +|-||++||.+|..|.+..+.
T Consensus        80 ~f-g~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV  149 (261)
T KOG4169|consen   80 TF-GTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV  149 (261)
T ss_pred             Hh-CceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh
Confidence            99 89999999999875         556999999999999999999999998764   578999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHH--ccCCeEEEEEecCcccCCCCCCCC------CCHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEW--ARDNIRINSVAPWFITTPLTEPYL------SDEKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~--~~~~i~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      |++||+++.+|+||+|...  .+.||+++++|||+++|.+...+.      +..+......++.   ..++|.+++..++
T Consensus       150 Y~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~---~~q~~~~~a~~~v  226 (261)
T KOG4169|consen  150 YAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERA---PKQSPACCAINIV  226 (261)
T ss_pred             hhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHc---ccCCHHHHHHHHH
Confidence            9999999999999998864  567999999999999999876552      2222222222233   3568999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCcccccccc
Q 041276          221 FLCMPAASYITGQTICVDGGFTVNGFFF  248 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~~~~~~~~  248 (251)
                      ..+..   ..||+...+|+|. ++..++
T Consensus       227 ~aiE~---~~NGaiw~v~~g~-l~~~~~  250 (261)
T KOG4169|consen  227 NAIEY---PKNGAIWKVDSGS-LEPVFK  250 (261)
T ss_pred             HHHhh---ccCCcEEEEecCc-EEEeee
Confidence            98844   5799999999998 665544

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=6.4e-33  Score=225.57  Aligned_cols=227  Identities=33%  Similarity=0.458  Sum_probs=196.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+.+|++|||||+++||                   +..++....+.+...+.++.++.+|++++++++++++++.+.+ 
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            46789999999999999                   3344455555666556678889999999999999999999998 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK  153 (251)
                      +++|++||++|... ..++.+.+.++++..++.|+.+++.+++.++|+|++++.+++|++||..+. .+.+....|+++|
T Consensus        82 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         82 GRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            89999999999876 566778899999999999999999999999999988878899999999988 7778889999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.+++.++.++.+.|++++.+.||++.++..+..... .....+....|.+++.+++|+|+.++++++....+++|+
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  239 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA-QWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQ  239 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence            9999999999999998999999999999999987654322 223344456687788999999999999998888889999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+|||+.+
T Consensus       240 ~~~~~~g~~~  249 (251)
T PRK12826        240 TLPVDGGATL  249 (251)
T ss_pred             EEEECCCccC
Confidence            9999999875

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=231.86  Aligned_cols=210  Identities=22%  Similarity=0.363  Sum_probs=173.9

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999                   3455666666676666678889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.+....|+++
T Consensus        82 -g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         82 -GHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             -CCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence             89999999999875 66788899999999999999999999999999998775 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH---HH---HHHhhCCC-CCCCCCHHHHHHHHHHHcC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK---FL---EEVKCRTP-MERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~---~~---~~~~~~~~-~~~~~~~~dva~~~~~l~~  224 (251)
                      |+|+.+|+++++.|+.++||+|+.|+||+++|++.........   ..   .......+ .....+|+|+|+.++..+.
T Consensus       160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998654211000   00   00000111 1235689999999987773

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.5e-33  Score=227.36  Aligned_cols=205  Identities=24%  Similarity=0.307  Sum_probs=170.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc------------------CCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK------------------CFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |+|+||||++|||     .++++.+.+.                  ..++.++++|+++.++++++.+    ++ +++|+
T Consensus         1 ~~vlItGas~gIG-----~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~----~~-~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIG-----KAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQLSE----QF-TQLDW   70 (235)
T ss_pred             CEEEEECCCChHH-----HHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCHHHHHHHHH----hc-CCCCE
Confidence            5799999999999     5555554432                  1356678999999999888543    45 78999


Q ss_pred             EEEcccCCCC-----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc---CCCCChhhHH
Q 041276           80 LINNVGTNYT-----TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL---STNLGTIYAA  151 (251)
Q Consensus        80 lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~---~~~~~~~Y~~  151 (251)
                      +|||+|....     ..++.+.+.+.|++.+++|+.+++.+++.++|+|++++.++++++||..+..   +.+.+..|++
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~a  150 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRA  150 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhh
Confidence            9999998642     2346678889999999999999999999999999988778999999865533   3456779999


Q ss_pred             hHHHHHHHHHHHHHHHcc--CCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          152 TKGAMNQLAKNLACEWAR--DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~--~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +|+++..|+++|+.|+.+  ++|+|+.|+||+++|++.++..          ...|.++..+|+|+|+.+++++++.+++
T Consensus       151 sK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~a~~~~~l~~~~~~~  220 (235)
T PRK09009        151 SKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----------QNVPKGKLFTPEYVAQCLLGIIANATPA  220 (235)
T ss_pred             hHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----------hccccCCCCCHHHHHHHHHHHHHcCChh
Confidence            999999999999999986  6999999999999999975421          2346666789999999999999998889


Q ss_pred             ccccEEEeCCCcc
Q 041276          230 ITGQTICVDGGFT  242 (251)
Q Consensus       230 ~~G~~i~vdgG~~  242 (251)
                      .+|+.+.+|||..
T Consensus       221 ~~g~~~~~~g~~~  233 (235)
T PRK09009        221 QSGSFLAYDGETL  233 (235)
T ss_pred             hCCcEEeeCCcCC
Confidence            9999999999975

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-33  Score=226.47  Aligned_cols=228  Identities=27%  Similarity=0.350  Sum_probs=189.1

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||++|||                   +...++.+.+.+.  +.++.++.+|+++.+++.++++++.+++ +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            58999999999999                   2233333333332  2357788999999999999999999998 789


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++||++|... ..+..+.+.++|...+++|+.+++.+++++++.|++++.++||++||..+... .+...|+.+|++++
T Consensus        79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~  156 (257)
T PRK07074         79 DVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLI  156 (257)
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHH
Confidence            99999999876 45677889999999999999999999999999999887899999999877543 35678999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                      .++++++.++.++||+|+.++||++.|++..... ..+..........|..++..++|+++++++|+++...+++|+.+.
T Consensus       157 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  236 (257)
T PRK07074        157 HYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLP  236 (257)
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEE
Confidence            9999999999999999999999999999865322 223444444445677888999999999999999888899999999


Q ss_pred             eCCCccccccccc
Q 041276          237 VDGGFTVNGFFFR  249 (251)
Q Consensus       237 vdgG~~~~~~~~~  249 (251)
                      +|||+........
T Consensus       237 ~~~g~~~~~~~~~  249 (257)
T PRK07074        237 VDGGLTAGNREMA  249 (257)
T ss_pred             eCCCcCcCChhhh
Confidence            9999887554443

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=223.48  Aligned_cols=221  Identities=30%  Similarity=0.382  Sum_probs=186.4

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |++|||||+++||                    +.+..++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence            6899999999999                    2233334444444445567789999999999999999999888 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCC-ChhhHHhH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNL-GTIYAATK  153 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~-~~~Y~~sK  153 (251)
                      |++|||+|......+..+.+.++++..+++|+.+++.+++.+++.|.++.   .|+||++||..+..+.+. +..|+++|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            99999999865456677889999999999999999999999999998753   478999999988887765 46899999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.+++.++.++.++|++++.++||++.||+..... .+..........|..+..+|+|+|+.+++++++...+++|+
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  239 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGS  239 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCc
Confidence            99999999999999999999999999999999765432 23344445556777777899999999999999888889999


Q ss_pred             EEEeCCC
Q 041276          234 TICVDGG  240 (251)
Q Consensus       234 ~i~vdgG  240 (251)
                      .+.+|||
T Consensus       240 ~~~~~g~  246 (247)
T PRK09730        240 FIDLAGG  246 (247)
T ss_pred             EEecCCC
Confidence            9999997

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-32  Score=222.25  Aligned_cols=226  Identities=33%  Similarity=0.504  Sum_probs=189.8

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+..|++|||||+++||                    +....+...+.+...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            35568999999999999                    1112222333333334457788999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++||++|... ...+.+.+.+.+++.+++|+.+.+.+++.+.+++++.+.+++|++||..+..+.+.+..|+.+|
T Consensus        83 -~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         83 -GRIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             -CCCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence             79999999999765 5666778899999999999999999999999999988889999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.+++.++.++.+.|++++.++||++.+++........... . ....|..++.+++|+++.+.++++....+++|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  238 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREA-K-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQ  238 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHh-h-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCC
Confidence            99999999999999989999999999999999876653322111 1 224577778899999999999998888889999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.++||..+
T Consensus       239 ~~~i~~g~~~  248 (249)
T PRK12825        239 VIEVTGGVDV  248 (249)
T ss_pred             EEEeCCCEee
Confidence            9999999764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.2e-33  Score=235.22  Aligned_cols=220  Identities=18%  Similarity=0.157  Sum_probs=173.4

Q ss_pred             EEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           21 LVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        21 lItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      |||||++|||                    +.+.++++.+++...+.++.++.+|+++.++++++++++.+.+ +++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence            6999999999                    2233333444443334467788999999999999999999887 799999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccC----------------
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLS----------------  142 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~----------------  142 (251)
                      |||||+..+..+..+.+.++|++.+++|+.+++.+++.++|.|++++  .|+||++||.++..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            99999864334566788999999999999999999999999998876  589999999876421                


Q ss_pred             -------------------CCCChhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcc-cCCCCCCCCCCHHHHHHHh
Q 041276          143 -------------------TNLGTIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFI-TTPLTEPYLSDEKFLEEVK  201 (251)
Q Consensus       143 -------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~  201 (251)
                                         ...+..|++||+|...+++.+++++.+ .||+|++++||++ .|+|.+.............
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~  239 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF  239 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence                               123567999999999999999999975 6999999999999 7898765322111111111


Q ss_pred             hCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          202 CRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       202 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      .+.+.+++.+|++.|+.+++++++.....+|+.+..+|+.
T Consensus       240 ~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        240 QKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            2345566789999999999999987778999999999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-33  Score=234.87  Aligned_cols=207  Identities=19%  Similarity=0.244  Sum_probs=179.1

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++.+.+.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            457889999999999999                   4566777777777777789999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|... ..++.+.+.+++++.+++|+.+.+.+++.++|+|++++.|+||++||..+..+.+....|+++|
T Consensus        84 -g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  161 (334)
T PRK07109         84 -GPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAK  161 (334)
T ss_pred             -CCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHH
Confidence             89999999999865 5677889999999999999999999999999999998789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcc--CCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          154 GAMNQLAKNLACEWAR--DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~--~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +++.+|+++++.|+..  .+|+++.|+||.++||+......   ...  ....|..+..+|+|+|+.++++++..
T Consensus       162 ~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~---~~~--~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS---RLP--VEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh---hcc--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999975  47999999999999997643211   010  11234556789999999999999754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-32  Score=222.24  Aligned_cols=225  Identities=32%  Similarity=0.395  Sum_probs=183.0

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++++|++|||||+++||                    +...+....+.+.+.+.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            567789999999999999                    112223333344444456678889999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||||... ..+..+.+.+.+++.+++|+.+.+.+++++.|+|++.  ++||++||.++..+.++...|+++
T Consensus        82 ~-~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         82 Y-GVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHHHH
Confidence            8 89999999999865 5667788899999999999999999999999999764  799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH--HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK--FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      |++++.+++++++|+.+ +++++.+.||+++|++.........  .........+.+++.+|+|+|+.++++++  ....
T Consensus       158 K~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~--~~~~  234 (252)
T PRK06077        158 KAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK--IESI  234 (252)
T ss_pred             HHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC--cccc
Confidence            99999999999999987 9999999999999998643221100  00111122345577899999999999995  3457


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      +|+.+.+|+|..+.
T Consensus       235 ~g~~~~i~~g~~~~  248 (252)
T PRK06077        235 TGQVFVLDSGESLK  248 (252)
T ss_pred             CCCeEEecCCeecc
Confidence            89999999998764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=9.2e-33  Score=211.52  Aligned_cols=232  Identities=22%  Similarity=0.287  Sum_probs=205.0

Q ss_pred             cCCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..|+||++||+|-.  +.|+                  -.+++++-.+++.+.-.....++||+++.+++++++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            46899999999965  4454                  223555555555544334667999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           73 FNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      + +++|+|||+.++.+.   .+.+.+.+.+.+...+++..++...+++++.|.|..  +|+|+.++-..+.+..|++...
T Consensus        82 ~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvM  158 (259)
T COG0623          82 W-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVM  158 (259)
T ss_pred             h-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchh
Confidence            9 899999999998752   346778999999999999999999999999999986  4899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +.+|++++.-+|.||.+++++|||||+|+-|+++|--.+....-.....+.+.+.|+++..++|||++..+||+|+.++.
T Consensus       159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssg  238 (259)
T COG0623         159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSG  238 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcc
Confidence            99999999999999999999999999999999999877776666788888899999999999999999999999999999


Q ss_pred             ccccEEEeCCCccccccc
Q 041276          230 ITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~~  247 (251)
                      +||+++.||+|+.+.++.
T Consensus       239 iTGei~yVD~G~~i~~m~  256 (259)
T COG0623         239 ITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             cccceEEEcCCceeeccC
Confidence            999999999999998775

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=5.9e-32  Score=219.11  Aligned_cols=226  Identities=37%  Similarity=0.499  Sum_probs=194.4

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++.+|++|||||+++||                   +...++.....+...+.++.++.+|+++++++.++++++...+ 
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF-   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            45679999999999999                   3344445555555556678888999999999999999998888 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|.+||++|... ..+..+.+.++++..++.|+.+.+.+++.+.++|.+.+.++||++||..+..+......|+.+|+
T Consensus        81 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         81 GALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            79999999999876 46667888999999999999999999999999998887789999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.+++++++++.+.|++++.++||.+.+++....  .+..........|.+++.+++|+++.+.+++++....++|+.
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  237 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL--PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQV  237 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            999999999999988899999999999999987542  223334444556777888999999999999998888999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      +.++||..+
T Consensus       238 ~~~~gg~~~  246 (246)
T PRK05653        238 IPVNGGMYM  246 (246)
T ss_pred             EEeCCCeeC
Confidence            999999864

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.2e-32  Score=225.52  Aligned_cols=203  Identities=23%  Similarity=0.293  Sum_probs=170.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ++|+++||||++|||     .++++.+.+.|.                  .+.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~~k~vlItGasggiG-----~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIG-----KATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEE-GRI   75 (273)
T ss_pred             CCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            579999999999999     444444433322                  35678899999999999999999998 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++|||||... ..++.+.+.++++..+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|++++
T Consensus        76 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         76 DVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             CEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999999875 66778889999999999999999999999999999888899999999998888888889999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CC--HH----HHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SD--EK----FLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~--~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +|+++++.|+.++||+++.|+||+++|++.....        ..  .+    ..+.+....+.++..+|+|+|+.+++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999853211        00  11    1123333446678889999999999999


Q ss_pred             CC
Q 041276          224 MP  225 (251)
Q Consensus       224 ~~  225 (251)
                      +.
T Consensus       235 ~~  236 (273)
T PRK06182        235 TA  236 (273)
T ss_pred             hC
Confidence            74

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=225.24  Aligned_cols=226  Identities=16%  Similarity=0.212  Sum_probs=186.7

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK-VTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |+++||||++|||                   +.+.+++..+++...+.. +.++.+|++++++++++++++.+.+ +++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            5799999999999                   345555566666544433 4557899999999999999999998 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      |++|||+|... ..++.+.+.++++..+++|+.+++.++++++|+|.++ ..++||++||..+..+.+....|+++|+++
T Consensus        80 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         80 DVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            99999999875 6677889999999999999999999999999999765 358999999999988888889999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-----CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      .+++++++.|+.++||+|+.|+||+++|++.+....     .+......... ..++..+|+|+|+.+++++. ..++++
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~~~~~~  236 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-KNRYLV  236 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-cCCeEE
Confidence            999999999999999999999999999998765321     11111111111 23456799999999999994 678899


Q ss_pred             ccEEEeCCCccccccc
Q 041276          232 GQTICVDGGFTVNGFF  247 (251)
Q Consensus       232 G~~i~vdgG~~~~~~~  247 (251)
                      ++.+.+++|+.+....
T Consensus       237 ~~~~~~~~~~~~~~~~  252 (272)
T PRK07832        237 YTSPDIRALYWFKRKA  252 (272)
T ss_pred             ecCcchHHHHHHHhcC
Confidence            9999999998877643

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.4e-32  Score=246.52  Aligned_cols=230  Identities=28%  Similarity=0.387  Sum_probs=195.7

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ...+.||++|||||+||||                   +...++.+.+.+... .++.++.+|++++++++++++++.+.
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3456899999999999999                   334444444444433 36778899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|++|||||... ..++.+.+.+.|+..+++|+.+++.+++.+.+.|++++. |+||++||..+..+.++...|++
T Consensus       496 ~-g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~a  573 (681)
T PRK08324        496 F-GGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGA  573 (681)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHH
Confidence            8 89999999999876 677788899999999999999999999999999998764 89999999999999989999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcc--cCCCCCCCC----------CCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFI--TTPLTEPYL----------SDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      +|++++.++++++.+++++||++|.|+||.+  .|++.....          ..++..+.+..+.+.+++..++|+|+++
T Consensus       574 sKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~  653 (681)
T PRK08324        574 AKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAV  653 (681)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHH
Confidence            9999999999999999999999999999999  887654321          1122233455667888889999999999


Q ss_pred             HHHcCCCCCCccccEEEeCCCcccc
Q 041276          220 AFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++++++.....+|+.+.+|||....
T Consensus       654 ~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        654 VFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HHHhCccccCCcCCEEEECCCchhc
Confidence            9999877888999999999997654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-32  Score=222.44  Aligned_cols=196  Identities=21%  Similarity=0.291  Sum_probs=168.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++||||||+|||     ..+++.+.+.|.                    ++.++.+|++++++++++++.+.+.+
T Consensus         2 ~~~~~~ilVtGasggiG-----~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          2 DLRGKVVAITGGARGIG-----LATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCCEEEEeCCCchHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999     333333332221                    36678899999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||||... ..++.+.+.+.+++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|++||
T Consensus        77 -~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  154 (273)
T PRK07825         77 -GPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASK  154 (273)
T ss_pred             -CCCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHH
Confidence             89999999999876 6677788999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      +++..|+++++.|+.+.||+++.|+||+++|++......           .......+|+|+|+.++.++....
T Consensus       155 aa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        155 HAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999998654311           012235689999999999996543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-31  Score=217.18  Aligned_cols=216  Identities=23%  Similarity=0.270  Sum_probs=183.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCC--CHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDAS--SRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~i~   70 (251)
                      ..+++|+++||||+++||                   +.+++.++.+++...+ .++.++.+|++  +.++++++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            467899999999999999                   3344445555554432 35666777775  7899999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|+||||||......+..+.+.+.|++.+++|+.+++.++++++++|++++.++||++||..+..+.+.+..|+
T Consensus        88 ~~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~  166 (247)
T PRK08945         88 EQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYA  166 (247)
T ss_pred             HHh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccH
Confidence            998 8999999999987545667788899999999999999999999999999988889999999999999888999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||++++.++++++.++...||+++.++||++.|++.....+..          ...++.+|+|+++.+++++++.+.++
T Consensus       167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (247)
T PRK08945        167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDSRRK  236 (247)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999999765433221          12356799999999999999999999


Q ss_pred             cccEEEeCC
Q 041276          231 TGQTICVDG  239 (251)
Q Consensus       231 ~G~~i~vdg  239 (251)
                      +|+.+...-
T Consensus       237 ~g~~~~~~~  245 (247)
T PRK08945        237 NGQSFDAQP  245 (247)
T ss_pred             CCeEEeCCC
Confidence            999987654

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=221.23  Aligned_cols=206  Identities=20%  Similarity=0.297  Sum_probs=174.2

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |++|||||+||||                   +.+.++++.+.+...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5799999999999                   3444555666666666678889999999999999999999998 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      +||||+|... ...+.+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+++|+++.+
T Consensus        80 ~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         80 VIVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999999876 567788899999999999999999999999999998878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ++++++.|+.+.||+++.|+||+++|++........................+++|+|+.++..+..
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998876543322222211111223346899999999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.9e-32  Score=243.85  Aligned_cols=213  Identities=21%  Similarity=0.232  Sum_probs=179.1

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ...+.++++|||||++|||                   +.++++++.+.+...+.++.++.+|++|+++++++++++.+.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4556789999999999999                   445566666777666778889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|+|++++ .|+||++||.++..+.++...|++
T Consensus       390 ~-g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  467 (582)
T PRK05855        390 H-GVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYAT  467 (582)
T ss_pred             c-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHH
Confidence            8 89999999999876 66778899999999999999999999999999999876 489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HH---HHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EK---FLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ||+|+++++++++.|+.++||+|++|+||+++|+|.+...-.   ++   .........+..+..+|+++|+.+++.+..
T Consensus       468 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        468 SKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999999987653210   10   011111122233446899999999999964


Q ss_pred             C
Q 041276          226 A  226 (251)
Q Consensus       226 ~  226 (251)
                      .
T Consensus       548 ~  548 (582)
T PRK05855        548 N  548 (582)
T ss_pred             C
Confidence            3

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=218.35  Aligned_cols=228  Identities=35%  Similarity=0.488  Sum_probs=188.8

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +..+++|++|||||+++||                   +.+.++.+.+.....  ++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457889999999999999                   122222222222211  4578899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|+|||++|...+.......+.+++.+.+++|+.+++.+++.+++.|...+. ++|+++||.++..+.+.+..|+.
T Consensus        84 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~  162 (264)
T PRK12829         84 F-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA  162 (264)
T ss_pred             h-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence            8 799999999998744666778899999999999999999999999999988766 78999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---------CHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---------DEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      +|++++.+++.++.++...+++++.+.||++.|++......         ............|..++.+++|+|+.+.++
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  242 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFL  242 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999998889999999999999997644321         122333444556777889999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcc
Q 041276          223 CMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~  242 (251)
                      +++.....+|+.+.+|||..
T Consensus       243 ~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        243 ASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             cCccccCccCcEEEeCCCcc
Confidence            98777788999999999975

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=222.19  Aligned_cols=207  Identities=21%  Similarity=0.303  Sum_probs=171.4

Q ss_pred             CCCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 041276            6 DHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus         6 ~~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      +++..+...+++|+++||||++|||                   +.+.++++.+++...+.++.++.+|++|.+++++++
T Consensus        29 ~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  108 (293)
T PRK05866         29 NRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALV  108 (293)
T ss_pred             CCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            3455567788999999999999999                   445556666666655667888999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCC--CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEY--MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-ST  143 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~  143 (251)
                      +++.+.+ +++|++|||||... ..++.+.  +.++++..+++|+.+++.+++.++|+|++++.|+||++||.++.. +.
T Consensus       109 ~~~~~~~-g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  186 (293)
T PRK05866        109 ADVEKRI-GGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS  186 (293)
T ss_pred             HHHHHHc-CCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC
Confidence            9999998 89999999999875 4444332  467899999999999999999999999988889999999987655 35


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +....|++||+|+++|+++++.|+.++||+|+.++||+++|++.+.....           ......+|+++|+.++..+
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-----------~~~~~~~pe~vA~~~~~~~  255 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-----------DGLPALTADEAAEWMVTAA  255 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-----------cCCCCCCHHHHHHHHHHHH
Confidence            67789999999999999999999999999999999999999987542110           0112358999999998888


Q ss_pred             CC
Q 041276          224 MP  225 (251)
Q Consensus       224 ~~  225 (251)
                      ..
T Consensus       256 ~~  257 (293)
T PRK05866        256 RT  257 (293)
T ss_pred             hc
Confidence            53

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=215.06  Aligned_cols=214  Identities=28%  Similarity=0.376  Sum_probs=181.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC----------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF----------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~----------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +.+++|++|||||+++||     ..+++.+.++|.                      .+..+.+|++|.++++++++++.
T Consensus         3 ~~~~~k~vlItGatg~iG-----~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLG-----RATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCEEEEECCCCcHh-----HHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHH
Confidence            357789999999999999     333333333222                      24456799999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|++||++|... .....+.+.+++++.+++|+.+++.+++.++++|++++.+++|++||..+..+.+....|+
T Consensus        78 ~~~-~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  155 (239)
T PRK12828         78 RQF-GRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYA  155 (239)
T ss_pred             HHh-CCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhH
Confidence            999 89999999999865 5566778899999999999999999999999999988889999999999998888889999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      ++|+++..+++.++.++.+.|++++.+.||++.+++.+......          +...+.+++|+|+.+.+++++...++
T Consensus       156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~~l~~~~~~~  225 (239)
T PRK12828        156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDA----------DFSRWVTPEQIAAVIAFLLSDEAQAI  225 (239)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCch----------hhhcCCCHHHHHHHHHHHhCcccccc
Confidence            99999999999999999888999999999999998654332211          12345789999999999999877889


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      +|+.+.+|||+++
T Consensus       226 ~g~~~~~~g~~~~  238 (239)
T PRK12828        226 TGASIPVDGGVAL  238 (239)
T ss_pred             cceEEEecCCEeC
Confidence            9999999999865

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=219.86  Aligned_cols=218  Identities=22%  Similarity=0.258  Sum_probs=177.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+|++|||||++|||     ..+++.+.+.                     +..+.++.+|++++++++++++.+.+.+ 
T Consensus         2 ~~k~vlItGasg~iG-----~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (275)
T PRK08263          2 MEKVWFITGASRGFG-----RAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF-   75 (275)
T ss_pred             CCCEEEEeCCCChHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc-
Confidence            468999999999999     3333333222                     2356678999999999999999999988 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||.++..+.+....|+++|+
T Consensus        76 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKa  154 (275)
T PRK08263         76 GRLDIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKW  154 (275)
T ss_pred             CCCCEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHH
Confidence            89999999999876 66778889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-------CHHHHHHHhhCCCCCCC-CCHHHHHHHHHHHcCCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-------DEKFLEEVKCRTPMERP-GEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~~~~  226 (251)
                      +++.++++++.++.++||+++.++||++.|++......       .+..........+..++ .+|+|+|+.++.++...
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~  234 (275)
T PRK08263        155 ALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE  234 (275)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999998742211       11222223333455566 89999999999999754


Q ss_pred             CCCccccEEEeCCCcc
Q 041276          227 ASYITGQTICVDGGFT  242 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~  242 (251)
                      .  .+++.+...++..
T Consensus       235 ~--~~~~~~~~~~~~~  248 (275)
T PRK08263        235 N--PPLRLFLGSGVLD  248 (275)
T ss_pred             C--CCeEEEeCchHHH
Confidence            2  3566665555433

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-31  Score=213.05  Aligned_cols=209  Identities=24%  Similarity=0.305  Sum_probs=176.9

Q ss_pred             CCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           16 QGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        16 ~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ++|+++||||++|||                   +.+....+.+.+.+.+.++.++.+|+++++++.++++++.+.+ ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            468999999999999                   3344555555555555678899999999999999999999998 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|++|||+|... ..+..+.+.++++..+++|+.+++.+++.++++|++++.++||++||..+..+.+.+..|+++|+++
T Consensus        84 id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         84 PDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            999999999876 5667788899999999999999999999999999988789999999999998888899999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +.++++++.++.++|++++.|.||+++|++.......        ......+..+|+|+|+.+++|+++....+.+..
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--------~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--------ADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--------cccccccCCCHHHHHHHHHHHHcCCccceeeeE
Confidence            9999999999999999999999999999986431111        111223457899999999999997766555544

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=209.88  Aligned_cols=191  Identities=23%  Similarity=0.268  Sum_probs=162.8

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE-------EEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVT-------GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT   90 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~-------~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~   90 (251)
                      +++|||||++|||     .++++.+.+. .++.       .+.+|+++++++++++++    + +++|++|||+|... .
T Consensus         1 ~~vlItGas~giG-----~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~----~-~~id~lv~~ag~~~-~   68 (199)
T PRK07578          1 MKILVIGASGTIG-----RAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEK----V-GKVDAVVSAAGKVH-F   68 (199)
T ss_pred             CeEEEEcCCcHHH-----HHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHh----c-CCCCEEEECCCCCC-C
Confidence            3799999999999     7777777765 4444       357899999999998875    3 78999999999765 5


Q ss_pred             CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccC
Q 041276           91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD  170 (251)
Q Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  170 (251)
                      .++.+.+.++|++.+++|+.+++.+++.+.|+|++.  ++|+++||..+..+.+.+..|+++|+|+++|+++++.|+ ++
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~  145 (199)
T PRK07578         69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PR  145 (199)
T ss_pred             CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cC
Confidence            677788999999999999999999999999999754  799999999999999999999999999999999999999 88


Q ss_pred             CeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       171 ~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      ||+||.|+||+++|++....           ...+.....+|+|+|+.+..+++   ...+|+.+.+
T Consensus       146 gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~a~~~~~~~~---~~~~g~~~~~  198 (199)
T PRK07578        146 GIRINVVSPTVLTESLEKYG-----------PFFPGFEPVPAARVALAYVRSVE---GAQTGEVYKV  198 (199)
T ss_pred             CeEEEEEcCCcccCchhhhh-----------hcCCCCCCCCHHHHHHHHHHHhc---cceeeEEecc
Confidence            99999999999999864210           11234456789999999999985   3589998875

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-31  Score=219.15  Aligned_cols=204  Identities=21%  Similarity=0.297  Sum_probs=166.4

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +|+||||||++|||     ..+++.+.+.|.                  .+.++.+|++|.++++++++++.+.+++++|
T Consensus         4 ~k~vlItGasggiG-----~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          4 KRSILITGCSSGIG-----AYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            58999999999999     444444444332                  2456789999999999999999777646899


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      ++|||||... ..++.+.+.++++..+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|++||+++++
T Consensus        79 ~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  157 (277)
T PRK05993         79 ALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG  157 (277)
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence            9999999876 667778899999999999999999999999999999888999999999999999899999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------------HHH---HHHHhh-CCCCCCCCCHHHHHHHHHH
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------------EKF---LEEVKC-RTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------------~~~---~~~~~~-~~~~~~~~~~~dva~~~~~  221 (251)
                      |+++++.|+.++||+|+.|+||+++|++.......             +..   ...... ..+.....+|+++|+.++.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~  237 (277)
T PRK05993        158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLH  237 (277)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999987543110             000   001111 1122234689999999999


Q ss_pred             HcCCC
Q 041276          222 LCMPA  226 (251)
Q Consensus       222 l~~~~  226 (251)
                      .+...
T Consensus       238 a~~~~  242 (277)
T PRK05993        238 ALTAP  242 (277)
T ss_pred             HHcCC
Confidence            88643

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-31  Score=216.85  Aligned_cols=204  Identities=18%  Similarity=0.237  Sum_probs=169.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------CeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC---------------------FKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+|++|||||+||||     ..+++.+.+.|                     .++.++.+|++|++++.++++.+.+.+ 
T Consensus         3 ~~~~vlVtGasggiG-----~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-   76 (277)
T PRK06180          3 SMKTWLITGVSSGFG-----RALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATF-   76 (277)
T ss_pred             CCCEEEEecCCChHH-----HHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-
Confidence            468999999999999     44444443322                     356678899999999999999999998 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||... ..+..+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||.++..+.+++..|+++|+
T Consensus        77 ~~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~  155 (277)
T PRK06180         77 GPIDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKF  155 (277)
T ss_pred             CCCCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHH
Confidence            89999999999865 56777889999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-----CHHHHH------HHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-----DEKFLE------EVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +++.++++++.|++++|++++.|+||++.|++......     .++...      ......+..++.+|+|+|+.++.++
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l  235 (277)
T PRK06180        156 ALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAV  235 (277)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999987543211     111111      1112234556789999999999998


Q ss_pred             CCC
Q 041276          224 MPA  226 (251)
Q Consensus       224 ~~~  226 (251)
                      ...
T Consensus       236 ~~~  238 (277)
T PRK06180        236 ESD  238 (277)
T ss_pred             cCC
Confidence            654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3.9e-31  Score=222.08  Aligned_cols=222  Identities=18%  Similarity=0.153  Sum_probs=168.0

Q ss_pred             CCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .+|++|||||++|||                    +.++++++.+++...+.++.++.+|+++.++++++++++.+.+ +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-R   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence            478999999999999                    2233334444443334456778999999999999999998888 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccC-----------
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLS-----------  142 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~-----------  142 (251)
                      ++|++|||||+..+..+..+.+.++|++.+++|+.+++.+++.++|+|++++  .|+||++||.++...           
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            9999999999864333345678999999999999999999999999998764  489999999877421           


Q ss_pred             ----------------------CCCChhhHHhHHHHHHHHHHHHHHHc-cCCeEEEEEecCcc-cCCCCCCCCCCHH-HH
Q 041276          143 ----------------------TNLGTIYAATKGAMNQLAKNLACEWA-RDNIRINSVAPWFI-TTPLTEPYLSDEK-FL  197 (251)
Q Consensus       143 ----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pG~v-~t~~~~~~~~~~~-~~  197 (251)
                                            ..++..|++||+|+..+++.+++++. +.||+|++|+||++ .|++.+....... ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                                  12356799999999999999999985 46999999999999 6998765321111 11


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCC
Q 041276          198 EEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       198 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      ..+. +.....+.+|++.|+.++.++.+.....+|..+..++
T Consensus       241 ~~~~-~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       241 PPFQ-KYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHH-HHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            1111 1112335689999999999887654445787776544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=3.6e-31  Score=222.54  Aligned_cols=218  Identities=23%  Similarity=0.245  Sum_probs=165.9

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|+||||||++|||                   +.+++++..+++.    .+.++.+|++|.++++++++++.+.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            467899999999999999                   2222333333332    26678999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc------------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL------------  141 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~------------  141 (251)
                       +++|+||||||.....   .+.+.+.|+..+++|+.+++.+++.++|.|++++.++||++||..+..            
T Consensus        98 -~~iD~li~nAg~~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  173 (315)
T PRK06196         98 -RRIDILINNAGVMACP---ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTR  173 (315)
T ss_pred             -CCCCEEEECCCCCCCC---CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccC
Confidence             8999999999976421   345677899999999999999999999999988778999999976532            


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHH-HHHHhh-CCCCC-CCCCHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKF-LEEVKC-RTPME-RPGEPKEVSSL  218 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~dva~~  218 (251)
                      +.+.+..|+.||++++.+++.++.++.++||+++.|+||++.|++.+........ ...+.. ..+.. ++.+|+++|..
T Consensus       174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  253 (315)
T PRK06196        174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAAT  253 (315)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHH
Confidence            2344578999999999999999999999999999999999999987654322111 011111 12222 46789999999


Q ss_pred             HHHHcCCCCCCccccEEEeC
Q 041276          219 VAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vd  238 (251)
                      +++|++......+|..+..|
T Consensus       254 ~~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        254 QVWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             HHHHhcCCccCCCCCeEeCC
Confidence            99999754433333344333

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.8e-30  Score=211.72  Aligned_cols=225  Identities=33%  Similarity=0.478  Sum_probs=186.0

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||+++||                   +....+++.+.+...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            47999999999999                   2334444444444445568889999999999999999999988 789


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++||++|... .....+.+.+++++.++.|+.+++.+++.++++|++.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        80 d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        80 DILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             CEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999999875 45566778899999999999999999999999999888889999999999888888999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---------CHHHH-HHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---------DEKFL-EEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .++++++.++.+.+++++.++||++.+++......         ..... .......+...+.+++|+|+.+++++++..
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  238 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAA  238 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccc
Confidence            99999999998889999999999999987532211         11111 112223355567899999999999998766


Q ss_pred             CCccccEEEeCCCccc
Q 041276          228 SYITGQTICVDGGFTV  243 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~  243 (251)
                      ...+|+.+.+|||+..
T Consensus       239 ~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       239 AGITGQAIVLDGGWTA  254 (255)
T ss_pred             cCccceEEEEcCcccc
Confidence            7789999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-31  Score=212.50  Aligned_cols=208  Identities=26%  Similarity=0.447  Sum_probs=170.3

Q ss_pred             EEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           21 LVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        21 lItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      |||||++|||                   +.+.++...+.+. .+.++.++.+|++++++++++++++     +++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence            6999999999                   2233333333333 2456888999999999999988763     7899999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK  161 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  161 (251)
                      ||+|... ..++.+.+.+++++++++|+.+++.+++  .+.|.  +.++||++||.++..+.+....|+++|++++++++
T Consensus        75 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~  149 (230)
T PRK07041         75 ITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALAR  149 (230)
T ss_pred             ECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHH
Confidence            9999876 5667788999999999999999999999  44453  35899999999999999999999999999999999


Q ss_pred             HHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCC
Q 041276          162 NLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       162 ~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      +++.|+.+  |+++.++||+++|++.......  ...........|.++..+|+|+|+.+++|+++  .+++|+.+.+||
T Consensus       150 ~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~g  225 (230)
T PRK07041        150 GLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDG  225 (230)
T ss_pred             HHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCC
Confidence            99999875  9999999999999986543221  22334445567778888999999999999974  579999999999


Q ss_pred             Cccc
Q 041276          240 GFTV  243 (251)
Q Consensus       240 G~~~  243 (251)
                      |..+
T Consensus       226 g~~~  229 (230)
T PRK07041        226 GHAI  229 (230)
T ss_pred             Ceec
Confidence            9865

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=3.8e-30  Score=209.03  Aligned_cols=224  Identities=29%  Similarity=0.442  Sum_probs=183.5

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ...+|++|||||+++||                    ....++.+.+.+... +..+.++.+|+++.+++.++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34679999999999999                    112233333333332 235778899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+|||+||... ..++.+.+.++++..+++|+.+++.+.+++.|+|.+++ +.+++++|..+..+.++...|+.|
T Consensus        83 ~-~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~s  159 (249)
T PRK09135         83 F-GRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-GAIVNITDIHAERPLKGYPVYCAA  159 (249)
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-eEEEEEeChhhcCCCCCchhHHHH
Confidence            8 89999999999876 45666778899999999999999999999999987754 789988888888888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.+++.++.++.+ +++++.+.||++.||+...... .........+.+.....+++|+|+++.+++.+ ....+|
T Consensus       160 K~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g  236 (249)
T PRK09135        160 KAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFD-EEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITG  236 (249)
T ss_pred             HHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccC
Confidence            99999999999999865 7999999999999998755433 33344444556777788999999999999875 556799


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      +.+.+++|...
T Consensus       237 ~~~~i~~g~~~  247 (249)
T PRK09135        237 QILAVDGGRSL  247 (249)
T ss_pred             cEEEECCCeec
Confidence            99999999864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=2.5e-30  Score=208.83  Aligned_cols=218  Identities=37%  Similarity=0.574  Sum_probs=187.3

Q ss_pred             EEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           20 ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        20 vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      +||||++++||                    +...+....+.+...+.++.++.+|+++.++++++++.+.+.+ +++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            58999999999                    1233444455555556678899999999999999999999988 79999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      +||++|... ...+.+.+.+.+++.+++|+.+.+.+++.+.+++.+.+.++++++||.++..+.+.+..|+++|++++.+
T Consensus        80 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        80 LVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999999865 4556678889999999999999999999999999877778999999999999988999999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCC
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      ++.++.++...|++++.++||++.+++.....  ...........+..++.+++|+++.+++++.+...+.+|+.+++++
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKLS--EKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhcC--hHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence            99999999889999999999999998765532  3333444556777888999999999999998877889999999999


Q ss_pred             Cc
Q 041276          240 GF  241 (251)
Q Consensus       240 G~  241 (251)
                      |+
T Consensus       237 g~  238 (239)
T TIGR01830       237 GM  238 (239)
T ss_pred             Cc
Confidence            97

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=6.6e-31  Score=201.09  Aligned_cols=207  Identities=22%  Similarity=0.249  Sum_probs=167.8

Q ss_pred             CCCEEEEecCCCCcC---------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG---------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ..|.++||||++|||                     +.++..+..+.......+++.+++|+++.++++.+++++.+--+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            346799999999999                     34433222222222356899999999999999999999988631


Q ss_pred             -CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-----------CceEEEecccccccC
Q 041276           75 -GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-----------AGNIILVSSVCGVLS  142 (251)
Q Consensus        75 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-----------~g~iv~vss~~~~~~  142 (251)
                       .++|++|+|||+...-....+.+.+.|.+.+++|..+++.++|+++|++++..           ++.|||+||..+-.+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence             57999999999987666777888999999999999999999999999998754           247999998776644


Q ss_pred             C---CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          143 T---NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       143 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      .   ..+.+|.+||+|++.++|+++.|+.+.+|-|..+|||||+|+|...-                 ...++||.+..+
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-----------------a~ltveeSts~l  224 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-----------------AALTVEESTSKL  224 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-----------------cccchhhhHHHH
Confidence            2   34679999999999999999999999999999999999999998621                 124788888888


Q ss_pred             HHHcCCCCCCccccEEEeCC
Q 041276          220 AFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdg  239 (251)
                      +.-.......-||..++-|+
T Consensus       225 ~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  225 LASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHHhcCcccCcceEccCC
Confidence            87777666667887777665

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-31  Score=220.44  Aligned_cols=233  Identities=20%  Similarity=0.157  Sum_probs=177.2

Q ss_pred             CCccCCCCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCH
Q 041276            1 MAQAYDHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSR   59 (251)
Q Consensus         1 m~~~~~~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   59 (251)
                      |++.|+  ..+++++++|+||||||++|||                   +.+.+++..+.+...  +.++.++.+|++|.
T Consensus         2 ~~~~~~--~~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~   79 (306)
T PRK06197          2 KMTKWT--AADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL   79 (306)
T ss_pred             CCCCCC--ccccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCH
Confidence            455564  3467889999999999999999                   334444445555432  34678899999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           60 AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        60 ~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++++++++++.+.+ +++|+||||||...+.   .+.+.+.++..+++|+.+++.+++.++|.|++.+.++||++||.++
T Consensus        80 ~~v~~~~~~~~~~~-~~iD~li~nAg~~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  155 (306)
T PRK06197         80 ASVRAAADALRAAY-PRIDLLINNAGVMYTP---KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGH  155 (306)
T ss_pred             HHHHHHHHHHHhhC-CCCCEEEECCccccCC---CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHH
Confidence            99999999999998 8999999999976422   3456778999999999999999999999999887789999999875


Q ss_pred             cc-------------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEE--ecCcccCCCCCCCCCCHHHHHHHhhCC
Q 041276          140 VL-------------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV--APWFITTPLTEPYLSDEKFLEEVKCRT  204 (251)
Q Consensus       140 ~~-------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i--~pG~v~t~~~~~~~~~~~~~~~~~~~~  204 (251)
                      ..             +.++...|+.||++++.|++.++++++++|++++++  +||+++|++.+.....  ....+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~~  233 (306)
T PRK06197        156 RIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVLA  233 (306)
T ss_pred             hccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHHH
Confidence            43             233457899999999999999999998888877665  6999999998765321  111111111


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      |. ...++++-+...++++.+ ....+|+.+..||+...
T Consensus       234 ~~-~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~~~  270 (306)
T PRK06197        234 PL-LAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFGEQ  270 (306)
T ss_pred             hh-hcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccccc
Confidence            11 234677777777777653 34568999888876644

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=214.94  Aligned_cols=204  Identities=23%  Similarity=0.331  Sum_probs=171.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC----------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF----------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++|+++||||+||||     .++++++.+.|.                .+.++.+|++|+++++++++.+.+.+ +++|+
T Consensus         3 ~~~~vlVtGasg~iG-----~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIG-----RATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARA-GRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHH-----HHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhC-CCCCE
Confidence            468999999999999     666666665542                35678999999999999999999999 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ||||||... ..+..+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+++|++++.+
T Consensus        77 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (270)
T PRK06179         77 LVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY  155 (270)
T ss_pred             EEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            999999876 5677788999999999999999999999999999998889999999999999998899999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH-------HHHHHHh--hCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE-------KFLEEVK--CRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +++++.|++++||+++.|+||+++|++........       .......  ...+..+..+|+++|+.++.++...
T Consensus       156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999876542211       0001000  0123455678999999999999754

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=9.1e-33  Score=202.71  Aligned_cols=220  Identities=29%  Similarity=0.427  Sum_probs=187.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHH---------------------HhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREW---------------------KTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~---------------------~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+|-+.|||||.||+|     ...++.+                     ++-|.++.|.++|++++.++...+...+.+
T Consensus         6 s~kglvalvtggasglg-----~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLG-----KATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCccccc-----HHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhh
Confidence            45789999999999999     2222222                     223678999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC-----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC------CceEEEeccccccc
Q 041276           73 FNGKLNILINNVGTNYTT-----KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG------AGNIILVSSVCGVL  141 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~------~g~iv~vss~~~~~  141 (251)
                      | ||+|.++||||+....     ....-.+.|++++.+++|+.++|++++.....|-++.      +|.||+..|.++..
T Consensus        81 f-grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   81 F-GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             c-cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            9 9999999999986422     2233468899999999999999999999999997642      57899999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC-CCCCHHHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-RPGEPKEVSSLVA  220 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~  220 (251)
                      +..+..+|++||.++.+|+--++++++..|||+++|.||.++||+....  .+.........+|.. |.+.|.|.++.+-
T Consensus       160 gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl--pekv~~fla~~ipfpsrlg~p~eyahlvq  237 (260)
T KOG1199|consen  160 GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL--PEKVKSFLAQLIPFPSRLGHPHEYAHLVQ  237 (260)
T ss_pred             CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh--hHHHHHHHHHhCCCchhcCChHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765  344445555566766 7899999999988


Q ss_pred             HHcCCCCCCccccEEEeCCCccc
Q 041276          221 FLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .+.  +..++||++|.+||-..|
T Consensus       238 aii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  238 AII--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHH--hCcccCCeEEEecceecC
Confidence            888  788999999999998765

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=213.20  Aligned_cols=196  Identities=19%  Similarity=0.231  Sum_probs=164.1

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|+||||||++|||                   +.+.+++..+.+...+ ++.++.+|+++++++.++++++.+++ +++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            47999999999999                   2334444444443333 68899999999999999999999998 789


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++|||+|.........+.+.++++..+++|+.+++.+++.++|.|++++.++||++||.++..+.+....|++||++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI  159 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            99999999865222333478899999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      .++++++.|+.++||++++++||++.|++.....            .+.....+|+++|+.++..+...
T Consensus       160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999764311            11123468999999999988643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.98  E-value=3.5e-30  Score=209.76  Aligned_cols=223  Identities=38%  Similarity=0.557  Sum_probs=180.4

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHH--HHHHHHHHHHhcC-CeeEEEeccCCC-HHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEA--ELNECLREWKTKC-FKVTGSVCDASS-RAEREKLMKQVS   70 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~--~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~i~   70 (251)
                      .+.+|++|||||++|||                   +..  .++++.+.....+ ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            56789999999999999                   111  1222222222111 257788899998 999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC-hhh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~Y  149 (251)
                      +.+ |++|++|||||......++.+.+.++|++.+++|+.+.+.+++.+.|.|+++   +||++||..+. +.+.. ..|
T Consensus        82 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence            999 8999999999987622478889999999999999999999999888888844   99999999999 77774 999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH-HHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC-C
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK-FLEEVKCRTPMERPGEPKEVSSLVAFLCMPA-A  227 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~  227 (251)
                      ++||+|+.+|++.++.|+.++||+++.|+||+++|++.+....... .........+..+...|+++++.+.++.+.. .
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAA  236 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchh
Confidence            9999999999999999999999999999999999999876543320 0111112225557888999999999998764 7


Q ss_pred             CCccccEEEeCCCc
Q 041276          228 SYITGQTICVDGGF  241 (251)
Q Consensus       228 ~~~~G~~i~vdgG~  241 (251)
                      .+++|+.+.+|||.
T Consensus       237 ~~~~g~~~~~~~~~  250 (251)
T COG1028         237 SYITGQTLPVDGGL  250 (251)
T ss_pred             ccccCCEEEeCCCC
Confidence            78999999999986

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.2e-31  Score=215.45  Aligned_cols=217  Identities=23%  Similarity=0.242  Sum_probs=171.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------c-HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------N-EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+++|+++||||++|||                   + ...++.+.+.++..+.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            347789999999999999                   1 12344445555554556788999999999999999999998


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-----cCCCCCh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-----LSTNLGT  147 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-----~~~~~~~  147 (251)
                      + +++|++|||||... ..   ..   .+...+++|+.+++.+++.+.|+|.+  .+++|++||..+.     .+.+.+.
T Consensus        82 ~-~~~d~vi~~ag~~~-~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~  151 (248)
T PRK07806         82 F-GGLDALVLNASGGM-ES---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYE  151 (248)
T ss_pred             C-CCCcEEEECCCCCC-CC---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcccc
Confidence            8 79999999998643 11   11   24567899999999999999999864  3799999996553     2234467


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      .|++||++++.++++++.|++++||+|+.|.||++.+++......  .+....  ..+.|.+++.+|+|+|+++.++++ 
T Consensus       152 ~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~-  228 (248)
T PRK07806        152 PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARAVT-  228 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHHhh-
Confidence            899999999999999999999999999999999999987543221  122111  224577889999999999999996 


Q ss_pred             CCCCccccEEEeCCCccc
Q 041276          226 AASYITGQTICVDGGFTV  243 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~  243 (251)
                       +.+.+|+.+.++||...
T Consensus       229 -~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        229 -APVPSGHIEYVGGADYF  245 (248)
T ss_pred             -ccccCccEEEecCccce
Confidence             56789999999999764

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.98  E-value=1.6e-30  Score=218.51  Aligned_cols=195  Identities=24%  Similarity=0.309  Sum_probs=157.1

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..|++++|||||+|||                   +.++++++.+++.+.  +.++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            4689999999999999                   566777777777654  3467888999985  2233333444433


Q ss_pred             C-CCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-C-CCCChhh
Q 041276           74 N-GKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-S-TNLGTIY  149 (251)
Q Consensus        74 ~-~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~-~~~~~~Y  149 (251)
                      + .++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||.++.. + .+....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            1 257799999998652 2457788999999999999999999999999999998889999999999865 3 5778999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ++||+|+.+|+++++.|++++||+|++|+||+++|+|.....          .  . ....+|+++|+.++..+.
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~----------~--~-~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR----------S--S-FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC----------C--C-CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999865210          0  0 113479999999998885

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6e-31  Score=214.23  Aligned_cols=215  Identities=19%  Similarity=0.169  Sum_probs=175.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHH----------------------hcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWK----------------------TKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~----------------------~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      |++|||||++|||     ..+++++.                      ..+.+++++.+|++++++++++++++.+.+ +
T Consensus         2 k~vlItGasggiG-----~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   75 (251)
T PRK06924          2 RYVIITGTSQGLG-----EAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSI-Q   75 (251)
T ss_pred             cEEEEecCCchHH-----HHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            7899999999999     22222221                      123467789999999999999999998776 3


Q ss_pred             C--cc--EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhH
Q 041276           76 K--LN--ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        76 ~--id--~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      .  ++  ++|+|+|...+..++.+.+.++|.+.+++|+.+++.+++.++|+|++. ..++||++||..+..+.+....|+
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  155 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYC  155 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHh
Confidence            2  22  899999987655677889999999999999999999999999999875 357999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHc--cCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          151 ATKGAMNQLAKNLACEWA--RDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ++|+|++.+++.++.|++  +.+|+|++|.||+++|++......    .....+.+....+.+++.+|+|+|+.+++|++
T Consensus       156 ~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  235 (251)
T PRK06924        156 SSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLE  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHh
Confidence            999999999999999985  468999999999999998643211    11112333344567788999999999999998


Q ss_pred             CCCCCccccEEEeCC
Q 041276          225 PAASYITGQTICVDG  239 (251)
Q Consensus       225 ~~~~~~~G~~i~vdg  239 (251)
                      +. .+++|+.+.+|+
T Consensus       236 ~~-~~~~G~~~~v~~  249 (251)
T PRK06924        236 TE-DFPNGEVIDIDE  249 (251)
T ss_pred             cc-cCCCCCEeehhh
Confidence            64 789999999885

>PRK06194 hypothetical protein; Provisional

Probab=99.98  E-value=3.1e-30  Score=214.10  Aligned_cols=211  Identities=22%  Similarity=0.323  Sum_probs=170.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.+.+++..+++...+.++.++.+|++|.++++++++.+.+.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999                   2334455555555555678889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC------ceEEEecccccccCCCCCh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA------GNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~------g~iv~vss~~~~~~~~~~~  147 (251)
                       +++|+||||||... ..++.+.+.++|+..+++|+.+++.+++.++|+|+++..      |+||++||.++..+.+...
T Consensus        82 -g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  159 (287)
T PRK06194         82 -GAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMG  159 (287)
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence             89999999999876 566778899999999999999999999999999987754      7999999999999988899


Q ss_pred             hhHHhHHHHHHHHHHHHHHHcc--CCeEEEEEecCcccCCCCCCCCCCH-H------------HHHHHhhCCCCCCCCCH
Q 041276          148 IYAATKGAMNQLAKNLACEWAR--DNIRINSVAPWFITTPLTEPYLSDE-K------------FLEEVKCRTPMERPGEP  212 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~--~~i~v~~i~pG~v~t~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~  212 (251)
                      .|+++|++++.|+++++.++..  .+|+++.++||++.|++.......+ .            ...............++
T Consensus       160 ~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  239 (287)
T PRK06194        160 IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTA  239 (287)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCH
Confidence            9999999999999999999874  5799999999999999875432110 0            11111111111123689


Q ss_pred             HHHHHHHHHHcCC
Q 041276          213 KEVSSLVAFLCMP  225 (251)
Q Consensus       213 ~dva~~~~~l~~~  225 (251)
                      +|+|+.++.++..
T Consensus       240 ~dva~~i~~~~~~  252 (287)
T PRK06194        240 EEVAQLVFDAIRA  252 (287)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999998743

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=3.8e-30  Score=209.32  Aligned_cols=211  Identities=21%  Similarity=0.293  Sum_probs=170.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ++++||||++|||     ..+++.+.+.                     +.++.++.+|+++.++++++++++.+.+ ++
T Consensus         1 ~~vlItGasg~iG-----~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~   74 (248)
T PRK10538          1 MIVLVTGATAGFG-----ECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEW-RN   74 (248)
T ss_pred             CEEEEECCCchHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            4799999999999     3333332222                     2357788999999999999999999998 79


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|++||++|......+..+.+.+++++++++|+.+++.+++.++|+|++++.++||++||..+..+.++...|+++|+++
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  154 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFV  154 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHH
Confidence            99999999976434566788999999999999999999999999999988889999999999988888889999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC-C-CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPY-L-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +.+++.++.++.++||+++.|+||++.+++.... . ........   ......+.+|+|+|+.++++++....+.+++.
T Consensus       155 ~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~  231 (248)
T PRK10538        155 RQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK---TYQNTVALTPEDVSEAVWWVATLPAHVNINTL  231 (248)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh---hccccCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence            9999999999999999999999999985544321 1 12111111   11122446899999999999987777777766


Q ss_pred             EEe
Q 041276          235 ICV  237 (251)
Q Consensus       235 i~v  237 (251)
                      ..+
T Consensus       232 ~~~  234 (248)
T PRK10538        232 EMM  234 (248)
T ss_pred             ccc
Confidence            544

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=216.28  Aligned_cols=226  Identities=21%  Similarity=0.162  Sum_probs=172.8

Q ss_pred             CCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHH
Q 041276            7 HDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKL   65 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~   65 (251)
                      ++..+++++++|+++||||++|||                   +.++++++.+++.+.  +.++.++.+|+++.++++++
T Consensus         4 ~~~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854          4 PLDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             CccccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence            345567889999999999999999                   455666666666543  34688999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---  142 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---  142 (251)
                      ++++.+.+ +++|+||||||....  +..+.+.+.++..+++|+.+++.+++.++|.|++. .++||++||.++..+   
T Consensus        84 ~~~~~~~~-~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~  159 (313)
T PRK05854         84 GEQLRAEG-RPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAIN  159 (313)
T ss_pred             HHHHHHhC-CCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcC
Confidence            99999998 899999999998652  33456788999999999999999999999999876 489999999887653   


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHH--ccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCC-C-
Q 041276          143 ---------TNLGTIYAATKGAMNQLAKNLACEW--ARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRT-P-  205 (251)
Q Consensus       143 ---------~~~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~-~-  205 (251)
                               .+.+..|+.||+|+..|++.|++++  ...||+||+++||++.|++......    .......+.... . 
T Consensus       160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (313)
T PRK05854        160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSAR  239 (313)
T ss_pred             cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhc
Confidence                     2446789999999999999999864  4578999999999999998754211    111111111100 0 


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          206 MERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      .....++++.|...++++..... .+|..+.-
T Consensus       240 ~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~  270 (313)
T PRK05854        240 GFLVGTVESAILPALYAATSPDA-EGGAFYGP  270 (313)
T ss_pred             ccccCCHHHHHHHhhheeeCCCC-CCCcEECC
Confidence            11246889999999888864322 24666543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.6e-29  Score=204.43  Aligned_cols=202  Identities=24%  Similarity=0.335  Sum_probs=172.6

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|+++||||++|||                   +...+++..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL-   82 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            46789999999999999                   3344555555665556678899999999999999999999998 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++||++|... ..++.+.+.+++++.+++|+.+++.+++.+.++|.+++.+++|++||..+..+.+....|+.+|+
T Consensus        83 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  161 (239)
T PRK07666         83 GSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKF  161 (239)
T ss_pred             CCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHH
Confidence            89999999999875 55677889999999999999999999999999999888899999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ++..++++++.|+.++||+++.|+||++.|++.......        .. ......+++|+|+.+..+++..
T Consensus       162 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~-~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        162 GVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--------DG-NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------cc-CCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999976432110        01 1224568999999999999753

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=206.60  Aligned_cols=211  Identities=17%  Similarity=0.223  Sum_probs=172.3

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++.+|+++||||++|||                   +...+.+..+.+...+.++.++.+|+++.+++.++++++.+.+
T Consensus         6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            356779999999999999                   2333444444455445677888999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||||... .....+.+.+.+++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|
T Consensus        86 -~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (274)
T PRK07775         86 -GEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAK  163 (274)
T ss_pred             -CCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHH
Confidence             79999999999865 5566778899999999999999999999999999888778999999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhh--CCCCCCCCCHHHHHHHHHHHcCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKC--RTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ++++.++++++.++.+.||+++.++||+++|++.......  .........  .....++..++|+|++++++++.
T Consensus       164 ~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        164 AGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            9999999999999988899999999999999975433221  111111111  12234578999999999999974

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=208.10  Aligned_cols=202  Identities=23%  Similarity=0.297  Sum_probs=168.8

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.+.++.+.+++ ..+.++.++.+|++|+++++++++.+.+ + 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~-   78 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M-   78 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c-
Confidence            56789999999999999                   233444444444 2345678899999999999999999877 6 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|.+++.+++|++||..+..+.++...|+++|+
T Consensus        79 ~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  157 (263)
T PRK09072         79 GGINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF  157 (263)
T ss_pred             CCCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence            79999999999865 56677889999999999999999999999999999887799999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ++..++++++.++.++||+|+.++||+++|++......      ..... ...+..+|+|+|+.+++++...
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~------~~~~~-~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ------ALNRA-LGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc------ccccc-ccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999998643211      11111 1224678999999999999643

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-30  Score=208.63  Aligned_cols=194  Identities=19%  Similarity=0.205  Sum_probs=160.7

Q ss_pred             CCCEEEEecCCCCcC--------------------cHHH-HHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           16 QGMTALVTGGTKGLG--------------------NEAE-LNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        16 ~~k~vlItGas~giG--------------------~~~~-~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+|+||||||++|||                    +.+. ++++.+++...+. ++.++.+|++|.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            458999999999999                    2232 5556666665443 688999999999999999999886 5


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++|||+|..... .....+.+...+.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++||
T Consensus        86 -g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 -GDVDVAIVAFGLLGDA-EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             -CCCCEEEEeeecCCch-hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence             7999999999986422 22223455667889999999999999999999998889999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +|+.+|+++++.|+.++||+|+.|+||+++|++......             .....+|+|+|+.++..+..
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------------~~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------------APLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------------CCCCCCHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999998754321             11235899999999999964

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=208.71  Aligned_cols=222  Identities=19%  Similarity=0.257  Sum_probs=176.4

Q ss_pred             CCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++|++|||||+||||                   +.+.+++..+.+...  +.++.++.+|++|++++++ ++++.+.+ 
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~-   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI-   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-
Confidence            578999999999999                   233333443333332  2467889999999999999 99998888 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||+|... .....+.+.+++++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.++...|+++|+
T Consensus        80 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         80 GRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             CCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence            89999999999876 56667889999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--------C---HHHHHHHhh--CCCCCCCCCHHHHHHHHHH
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--------D---EKFLEEVKC--RTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--------~---~~~~~~~~~--~~~~~~~~~~~dva~~~~~  221 (251)
                      +++.|+++++.++.++||+++.++||+++|++......        .   ......+..  ..+..++.+|+|+|+++++
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE  238 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            99999999999999999999999999999997643211        0   111111111  1244567899999999999


Q ss_pred             HcCCCCCCccccEEEeCCCccc
Q 041276          222 LCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++....   +..+.+..|..+
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~  257 (280)
T PRK06914        239 IAESKRP---KLRYPIGKGVKL  257 (280)
T ss_pred             HHcCCCC---CcccccCCchHH
Confidence            9975443   234566555443

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=4e-29  Score=210.82  Aligned_cols=222  Identities=17%  Similarity=0.109  Sum_probs=167.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.++++++.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            456789999999999999                   3444555555554334568889999999999999999987776


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--ceEEEeccccccc----------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA--GNIILVSSVCGVL----------  141 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--g~iv~vss~~~~~----------  141 (251)
                       +++|+||||||+........+.+.+.++..+++|+.+++.+++.++|+|++.+.  ++||++||.....          
T Consensus        82 -~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 -KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             -CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence             789999999998653333456789999999999999999999999999988753  6999999976432          


Q ss_pred             -------------------------CCCCChhhHHhHHHHHHHHHHHHHHHc-cCCeEEEEEecCcc-cCCCCCCCCCCH
Q 041276          142 -------------------------STNLGTIYAATKGAMNQLAKNLACEWA-RDNIRINSVAPWFI-TTPLTEPYLSDE  194 (251)
Q Consensus       142 -------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pG~v-~t~~~~~~~~~~  194 (251)
                                               +..+...|+.||.+...+++.+++++. .+||++++++||++ .|++.+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  240 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF  240 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence                                     112346899999999999999999985 46999999999999 588865532211


Q ss_pred             -HHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          195 -KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       195 -~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                       .+...+. +.......++++.++.+++++.+.....+|..+.
T Consensus       241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        241 QKLFPWFQ-KNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHH-HHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence             1111111 1112234578888888888886554446887776

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-30  Score=207.82  Aligned_cols=177  Identities=27%  Similarity=0.386  Sum_probs=149.2

Q ss_pred             EEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCc
Q 041276           50 TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG  129 (251)
Q Consensus        50 ~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g  129 (251)
                      .++.+|+++.++++++++++.    +++|+||||||... .        +.+++.+++|+.+++.+++.++|+|++.  |
T Consensus        26 ~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~-~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g   90 (241)
T PRK12428         26 GFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPG-T--------APVELVARVNFLGLRHLTEALLPRMAPG--G   90 (241)
T ss_pred             HhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCC-C--------CCHHHhhhhchHHHHHHHHHHHHhccCC--c
Confidence            357899999999999998762    58999999999753 1        2478999999999999999999999653  8


Q ss_pred             eEEEeccccccc---------------------------CCCCChhhHHhHHHHHHHHHHHH-HHHccCCeEEEEEecCc
Q 041276          130 NIILVSSVCGVL---------------------------STNLGTIYAATKGAMNQLAKNLA-CEWARDNIRINSVAPWF  181 (251)
Q Consensus       130 ~iv~vss~~~~~---------------------------~~~~~~~Y~~sK~a~~~~~~~la-~e~~~~~i~v~~i~pG~  181 (251)
                      +||++||.++..                           +.+....|++||+|++.+++.++ .|++++||+||+|+||+
T Consensus        91 ~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~  170 (241)
T PRK12428         91 AIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGP  170 (241)
T ss_pred             EEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCC
Confidence            999999998863                           45667899999999999999999 99999999999999999


Q ss_pred             ccCCCCCCCCCC--HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          182 ITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       182 v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++|+|.+.....  +....  ....|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+..
T Consensus       171 v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        171 VFTPILGDFRSMLGQERVD--SDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             ccCcccccchhhhhhHhhh--hcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCchHH
Confidence            999997654321  11111  1235778889999999999999998899999999999999764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.1e-29  Score=204.01  Aligned_cols=199  Identities=24%  Similarity=0.311  Sum_probs=164.1

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh-cCCCc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL-FNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~~i   77 (251)
                      |++|||||++|||                   +.+.++++.+.+.  +.++.++.+|+++.+++.++++.+.+. + +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG-GRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC-CCC
Confidence            7899999999999                   2223333333222  346788899999999999999998876 5 799


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+||||||... ...+.+.+.+++++.+++|+.+++.+++.+.++|++++.++||++||..+..+.+....|+.||++++
T Consensus        79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  157 (260)
T PRK08267         79 DVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVR  157 (260)
T ss_pred             CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHH
Confidence            99999999876 56677889999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +++++++.++.++||+++.|+||+++|++.+..... ..... ..  ......+|+|+|+.++.++.
T Consensus       158 ~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~~~~-~~--~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        158 GLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE-VDAGS-TK--RLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCCcCCcccccccch-hhhhh-Hh--hccCCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999999987642111 11111 11  12234689999999999985

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=8.8e-30  Score=204.53  Aligned_cols=172  Identities=22%  Similarity=0.253  Sum_probs=153.9

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc----------------------CCeeEEEeccCCCHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTK----------------------CFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~----------------------~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      ...++.+|.|+|||+.+|+|     ..++.++.+.                      ..+...+.+|++++++++++.+.
T Consensus        23 ~~~~~~~k~VlITGCDSGfG-----~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~   97 (322)
T KOG1610|consen   23 VLDSLSDKAVLITGCDSGFG-----RLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQW   97 (322)
T ss_pred             cccccCCcEEEEecCCcHHH-----HHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHH
Confidence            44567899999999999999     3344333322                      34667789999999999999999


Q ss_pred             HHHhcC-CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           69 VSSLFN-GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        69 i~~~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      +++..+ .++-.||||||+....++.+..+.+++++.+++|++|++.+++.++|++++.+ ||||++||+.|..+.|..+
T Consensus        98 V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g  176 (322)
T KOG1610|consen   98 VKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALG  176 (322)
T ss_pred             HHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccc
Confidence            988763 35999999999887788888999999999999999999999999999999876 9999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE  188 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~  188 (251)
                      .|++||+|++.|+.++++|+.+.||+|..|.||.++|++..
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            99999999999999999999999999999999999999986

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=203.62  Aligned_cols=200  Identities=24%  Similarity=0.350  Sum_probs=162.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |++|||||++|||     ..+++.+...|.+                  +.++.+|+++.++++++++.+.+.+ +++|+
T Consensus         2 k~vlItGasggiG-----~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIG-----RALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEH-GGLDV   75 (274)
T ss_pred             CEEEEecCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            7899999999999     5555555443322                  4567899999999999999999988 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      +|||||... ..+..+.+.+++++.+++|+.+++.+++.++|+|++. .|+||++||..+..+.+....|+++|++++.+
T Consensus        76 vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         76 LINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            999999865 5677788999999999999999999999999999765 48999999999999888899999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH-----------HHHHHHhhC--CCCCCCCCHHHHHHHHHHHcCC
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE-----------KFLEEVKCR--TPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +++++.|++++||+|+.++||+++|++.+......           ...+.+...  .......+|+++|+.++..+..
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999876432110           011111110  1112345899999999988753

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=8.6e-30  Score=195.04  Aligned_cols=219  Identities=22%  Similarity=0.191  Sum_probs=175.1

Q ss_pred             CCCEEEEecCCCCcC----------cHHHHHHHHHHHHhc--------CCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLG----------NEAELNECLREWKTK--------CFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG----------~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      .+|++|+||+|+|||          +.+.+.....+....        +........|++......++++..+..+ ++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-GKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-Cce
Confidence            579999999999999          111111111222111        1122234456667777888888888887 899


Q ss_pred             cEEEEcccCCCCCCCCC--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHH
Q 041276           78 NILINNVGTNYTTKPTV--EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      |++|||||...+.....  ..+.++|++.+++|+++.+.+.+.++|.+++.+ .+.+|++||.++..+...|+.||.+|+
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            99999999887544433  789999999999999999999999999999885 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      |.++|.+.+|.|-. .+|++.++.||.++|+|.....    -+++....+++....++..+|...|+.+..|+-... +.
T Consensus       164 Ar~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~  241 (253)
T KOG1204|consen  164 ARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FV  241 (253)
T ss_pred             HHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-cc
Confidence            99999999999955 7999999999999999985543    245666677777778888999999999999984333 89


Q ss_pred             cccEEEe
Q 041276          231 TGQTICV  237 (251)
Q Consensus       231 ~G~~i~v  237 (251)
                      +||.++.
T Consensus       242 sG~~vdy  248 (253)
T KOG1204|consen  242 SGQHVDY  248 (253)
T ss_pred             ccccccc
Confidence            9998864

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=202.32  Aligned_cols=205  Identities=25%  Similarity=0.315  Sum_probs=169.3

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ++++|||||++|||                   +....+++.+.+...+.++.++.+|+++.++++++++++.+++ +++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            47899999999999                   3344455555666556678889999999999999999999998 799


Q ss_pred             cEEEEcccCCCCCCCCCCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           78 NILINNVGTNYTTKPTVEY-MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      |++|||+|... ...+.+. +.+++++.+++|+.+++.+++.+.|+|.+.. +++|++||..+..+.++...|+++|+++
T Consensus        80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         80 DILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             CEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CEEEEEecccccCCCCCccHHHHHHHHH
Confidence            99999999876 5566677 8999999999999999999999999997654 8999999999998888899999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +.++++++.++.+++++++.+.||++.|++.+......... .........++.+|+|+|+.+++++..
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKP-LGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccc-cccccccccCCCCHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999876443211100 000001123678999999999999964

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.5e-29  Score=202.31  Aligned_cols=204  Identities=21%  Similarity=0.240  Sum_probs=165.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------CeeEEEeccCCCHHHHHHHHHH-HHHhcC--C
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKC-------------------FKVTGSVCDASSRAEREKLMKQ-VSSLFN--G   75 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~-------------------~~~~~~~~D~~~~~~~~~~~~~-i~~~~~--~   75 (251)
                      +++|||||++|||     ..+++.+.+.|                   .++.++.+|+++.+++++++++ +.+.++  +
T Consensus         2 ~~vlItGasggiG-----~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLG-----AALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchH-----HHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            4799999999999     44444444332                   3566788999999999998877 555441  4


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|++|||+|...+..++.+.+.+.+++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            79999999998764566778899999999999999999999999999998777999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----HHHHHHHhhCCCCCCCCCHHHHHH-HHHHHcCCCC
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSS-LVAFLCMPAA  227 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~~~~~  227 (251)
                      ++.+++.++.+ .+.||+++.|+||+++|++.......    ......+....+.++..+|+|+|+ .+.+|+++..
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcccc
Confidence            99999999999 77899999999999999975432110    112233444567788899999999 5667776543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.8e-28  Score=196.96  Aligned_cols=216  Identities=21%  Similarity=0.333  Sum_probs=173.1

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|+|+||||++|||                   +.+.+..+.+.+... ..+.++.+|++++++++++++++...+ 
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   79 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL-   79 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            46789999999999999                   233333333444332 257889999999999999999998888 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~Y~~sK  153 (251)
                      +++|.+++++|... ..+..  +.+.+++.+++|+.+++.+.+.++|+|++.  +++|++||..+.. +.+....|+++|
T Consensus        80 ~~id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         80 NAIDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             CCCCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecchhcccCCCCchHHHHHH
Confidence            78999999998754 33332  348899999999999999999999998653  7999999987743 556778899999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +++..++++++.++..+||+++.|+||++.|++...     ..+.....  ......+++|+++.+++++++.+.+++|+
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-----~~~~~~~~--~~~~~~~~~~va~~~~~~~~~~~~~~~g~  227 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-----RNWKKLRK--LGDDMAPPEDFAKVIIWLLTDEADWVDGV  227 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-----hhhhhhcc--ccCCCCCHHHHHHHHHHHhcccccCccCC
Confidence            999999999999999999999999999999987421     11111110  11235689999999999999888889999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+|||..+
T Consensus       228 ~~~~~~~~~~  237 (238)
T PRK05786        228 VIPVDGGARL  237 (238)
T ss_pred             EEEECCcccc
Confidence            9999999765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-28  Score=198.88  Aligned_cols=195  Identities=21%  Similarity=0.253  Sum_probs=165.0

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +|+++||||++|||                   +.++++++.+.+...  +.++.++.+|+++++++.++++++.+.+ +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            68999999999999                   233444444444433  4578889999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC-ChhhHHhHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL-GTIYAATKG  154 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-~~~Y~~sK~  154 (251)
                      ++|++|||||+.. .....+.+.+.+++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.+. ...|+.||+
T Consensus        81 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         81 GLDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            9999999999876 55666778899999999999999999999999999888889999999998888775 688999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +++.+++.++.++...|++++.|+||+++|++.+....             .....+++++|+.++..+...
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhcC
Confidence            99999999999999889999999999999998754321             123467999999998888643

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.4e-29  Score=227.34  Aligned_cols=200  Identities=23%  Similarity=0.300  Sum_probs=170.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|+++||||++|||                   +.+.++++.+++...+.++.++.+|++|.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999                   4555666666676666788899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCC--CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           74 NGKLNILINNVGTNYTTKPTVE--YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                       +++|++|||||... .....+  .+.+++++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++
T Consensus       447 -g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  524 (657)
T PRK07201        447 -GHVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVA  524 (657)
T ss_pred             -CCCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHH
Confidence             89999999999764 333322  23688999999999999999999999999888899999999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ||+++++|+++++.|+.++||+|+.|+||+++|+|......           .......+|+++|+.++..+..
T Consensus       525 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        525 SKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998754211           0122346899999999987754

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-28  Score=199.11  Aligned_cols=215  Identities=17%  Similarity=0.230  Sum_probs=170.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .|++|||||++|||     ..+++.+.+.                     +.++.++.+|++|.++++++++++.+.+ +
T Consensus         2 ~k~vlVtGasg~IG-----~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   75 (276)
T PRK06482          2 SKTWFITGASSGFG-----RGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAAL-G   75 (276)
T ss_pred             CCEEEEecCCCHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            37899999999999     3333332222                     2356778999999999999999998888 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||... ..+..+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|++||++
T Consensus        76 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (276)
T PRK06482         76 RIDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWG  154 (276)
T ss_pred             CCCEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHH
Confidence            9999999999876 566777889999999999999999999999999998888999999999998888889999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------H----HHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------E----KFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ++.++++++.++.++||+++.++||.+.|++.......       .    .+..... ..+.....+++|++++++..+.
T Consensus       155 ~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~a~~~~~~  233 (276)
T PRK06482        155 IEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA-DGSFAIPGDPQKMVQAMIASAD  233 (276)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh-hccCCCCCCHHHHHHHHHHHHc
Confidence            99999999999999999999999999999876432210       1    1122221 1122234689999999998885


Q ss_pred             CCCCCccccEEEeCCCcc
Q 041276          225 PAASYITGQTICVDGGFT  242 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~  242 (251)
                      ...   .+..+.+.+|..
T Consensus       234 ~~~---~~~~~~~g~~~~  248 (276)
T PRK06482        234 QTP---APRRLTLGSDAY  248 (276)
T ss_pred             CCC---CCeEEecChHHH
Confidence            332   244566665543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1.3e-28  Score=185.61  Aligned_cols=167  Identities=26%  Similarity=0.378  Sum_probs=148.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +.+.|.+||||||++|||     .++++++.+.|.                    .++...||+.|.++.+++++++++.
T Consensus         1 mk~tgnTiLITGG~sGIG-----l~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           1 MKTTGNTILITGGASGIG-----LALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             CcccCcEEEEeCCcchhh-----HHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhh
Confidence            357899999999999999     555555555443                    3455689999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPT-VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      | +.+++++||||+....+.. .+...+..+.-+.+|+.++..+++.++|++++++.+.||+|||..+..|......|++
T Consensus        76 ~-P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYca  154 (245)
T COG3967          76 Y-PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCA  154 (245)
T ss_pred             C-CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchh
Confidence            9 8999999999998643332 3566777899999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTP  185 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~  185 (251)
                      +|+|+..++.+|+.++...+|+|.-+.|-.|+|+
T Consensus       155 TKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         155 TKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999996

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-27  Score=192.14  Aligned_cols=209  Identities=28%  Similarity=0.408  Sum_probs=171.8

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.+.+++++||||+|+||                   +..++..+.+.+... .++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            346689999999999999                   344444555555443 467889999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|++||++|... ..++.+.+.+++++.+++|+.+++.+++++++.|+ ++.++||++||.++..+.+....|+++|
T Consensus        81 -~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~~~~~y~~sk  157 (237)
T PRK07326         81 -GGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGAAYNASK  157 (237)
T ss_pred             -CCCCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCCCCchHHHHH
Confidence             79999999999875 56677889999999999999999999999999994 4458999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +++..+++.++.++...|++++.|+||++.|++.......+           .....+++|+++.+++++......+.+ 
T Consensus       158 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----------~~~~~~~~d~a~~~~~~l~~~~~~~~~-  225 (237)
T PRK07326        158 FGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----------DAWKIQPEDIAQLVLDLLKMPPRTLPS-  225 (237)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----------hhccCCHHHHHHHHHHHHhCCcccccc-
Confidence            99999999999999999999999999999998765432110           011257999999999999876554444 


Q ss_pred             EEEe
Q 041276          234 TICV  237 (251)
Q Consensus       234 ~i~v  237 (251)
                      .|++
T Consensus       226 ~~~~  229 (237)
T PRK07326        226 KIEV  229 (237)
T ss_pred             ceEE
Confidence            4443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.9e-28  Score=194.46  Aligned_cols=192  Identities=21%  Similarity=0.276  Sum_probs=162.2

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |+++||||++|||                   +.+..+...+.+... +.++.++++|++++++++++++++.+    ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence            7899999999999                   233444444444332 34788999999999999999987744    57


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++|||+|... .....+.+.+++.+.+++|+.+++.+++.+.|+|.+++.+++|++||..+..+.+....|+++|+++.
T Consensus        78 d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         78 DIVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             CEEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            99999999866 55667888999999999999999999999999999888899999999999888888899999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +++++++.|+.+.||+++.|+||+++|++.+...            .|.....+|+++|+.++.++...
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999764321            13334568999999999999754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=6.6e-29  Score=188.18  Aligned_cols=166  Identities=23%  Similarity=0.337  Sum_probs=147.8

Q ss_pred             CCCEEEEecCC-CCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHH-hcC
Q 041276           16 QGMTALVTGGT-KGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSS-LFN   74 (251)
Q Consensus        16 ~~k~vlItGas-~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~-~~~   74 (251)
                      +.|+|||||+| ||||     .+++.++.+.|-                   .+...++|+++++++..+..++++ .+ 
T Consensus         6 ~~k~VlItgcs~GGIG-----~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~-   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIG-----YALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPD-   79 (289)
T ss_pred             CCCeEEEeecCCcchh-----HHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCC-
Confidence            45889999876 8899     666777665542                   355679999999999999999998 66 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      |++|.|+||||... ..|..+.+.+..++.|++|++|++.+++++.-.+.+. .|.||+++|++++.+.|..+.|.+||+
T Consensus        80 Gkld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfpf~~iYsAsKA  157 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFPFGSIYSASKA  157 (289)
T ss_pred             CceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccchhhhhhHHHH
Confidence            89999999999887 7788899999999999999999999999999555554 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP  189 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~  189 (251)
                      |+..+++.|+.|+++.||+|..+.||.|.|++...
T Consensus       158 Aihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  158 AIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999999998765

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=3.8e-28  Score=201.19  Aligned_cols=216  Identities=26%  Similarity=0.314  Sum_probs=171.9

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      ....++.+++++||||++|||                   +.++.+++.+.+...  ...+.++.+|+++..++++++++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            346778899999999999999                   556667777777753  45788899999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC------
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS------  142 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~------  142 (251)
                      +++.+ +++|++|||||+..++.   ..+.|.++..|.+|+.|++.+++.++|.|++..++|||++||..+...      
T Consensus       108 ~~~~~-~~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  108 FKKKE-GPLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HHhcC-CCccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence            99998 89999999999987443   667789999999999999999999999999988899999999886110      


Q ss_pred             -------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC-CCCCCCCCHHHHHHHhhCCCCCCCCCHHH
Q 041276          143 -------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPGEPKE  214 (251)
Q Consensus       143 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  214 (251)
                             +.....|+.||.+...+++.|++.+.. ||.++.++||.+.|+ +.+ .   .-+...+..........++++
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~---~~~~~~l~~~l~~~~~ks~~~  258 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V---NLLLRLLAKKLSWPLTKSPEQ  258 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c---hHHHHHHHHHHHHHhccCHHH
Confidence                   112235999999999999999999988 999999999999999 544 1   122222222223333368999


Q ss_pred             HHHHHHHHcCC-CCCCccccE
Q 041276          215 VSSLVAFLCMP-AASYITGQT  234 (251)
Q Consensus       215 va~~~~~l~~~-~~~~~~G~~  234 (251)
                      -|.+.++.+-. +-...+|..
T Consensus       259 ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  259 GAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             HhhheehhccCccccCccccc
Confidence            99998888853 345566655

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.3e-27  Score=191.63  Aligned_cols=202  Identities=21%  Similarity=0.176  Sum_probs=171.0

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKC--FKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +.++|||||+|||                   +.+++.++.+++.-..  ..+.+..+|+.|.+++...+++++..+ +.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence            6899999999999                   5566777777766442  237788999999999999999999988 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +|.+++|||... .+.+.+.+++.++.+|++|+.++++++++.+|.|++.. .|+|++++|.++..+..++++|+++|.|
T Consensus       113 ~d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a  191 (331)
T KOG1210|consen  113 IDNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA  191 (331)
T ss_pred             cceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence            999999999987 88899999999999999999999999999999999886 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +.+|...+++|+.++||+|....|+.+.||.+..-.........+.+  ......++|++|++++.=+
T Consensus       192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~--g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE--GGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeec--CCCCCcCHHHHHHHHHhHH
Confidence            99999999999999999999999999999976543222111222221  1223467999999887544

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=2.3e-26  Score=185.84  Aligned_cols=188  Identities=24%  Similarity=0.274  Sum_probs=159.7

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC------------------CeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC------------------FKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~------------------~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +.+.+|+++||||+|+||     ..+++.+.+.|                  .++.++.+|+++.++++++++.    + 
T Consensus         2 ~~~~~~~vlItGgsg~iG-----~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~-   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIG-----RAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEA----A-   71 (238)
T ss_pred             CCCCCCEEEEECCCchHH-----HHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHh----c-
Confidence            557889999999999999     55555554443                  2466788999999999888765    3 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++||++|......++.+.+.+.+.+.+++|+.+++.+++++.+.|++.+.+++|++||..+..+.+....|+.+|+
T Consensus        72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  151 (238)
T PRK08264         72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKA  151 (238)
T ss_pred             CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHH
Confidence            68999999999854466778889999999999999999999999999999888899999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +++.+++.++.++.+.|++++.+.||.++|++......               ...+++++++.++..+..
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------------~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA---------------PKASPADVARQILDALEA  207 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc---------------CCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999998543211               135788888888877754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.95  E-value=3.6e-27  Score=180.36  Aligned_cols=144  Identities=31%  Similarity=0.461  Sum_probs=135.3

Q ss_pred             CEEEEecCCCCcC--------------------c--HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           18 MTALVTGGTKGLG--------------------N--EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        18 k~vlItGas~giG--------------------~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      |+||||||++|||                    +  .+.++++.++++..+.++.++++|++++++++++++++.+.+ +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence            7999999999999                    4  577788888888888899999999999999999999999888 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.+.|    ++.|+||++||.++..+.+.+..|+++|+|
T Consensus        80 ~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   80 PLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             SESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHH
Confidence            9999999999988 88888999999999999999999999999999    446999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 041276          156 MNQLAKNLACEW  167 (251)
Q Consensus       156 ~~~~~~~la~e~  167 (251)
                      +.+|++++++|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.7e-26  Score=185.81  Aligned_cols=184  Identities=19%  Similarity=0.229  Sum_probs=150.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHH--------------------HhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREW--------------------KTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~--------------------~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |+++||||++|||     .++++.+                    .+...++.++.+|+++.++++++++++.    ..+
T Consensus         2 ~~vlItGas~giG-----~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~----~~~   72 (240)
T PRK06101          2 TAVLITGATSGIG-----KQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP----FIP   72 (240)
T ss_pred             cEEEEEcCCcHHH-----HHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc----cCC
Confidence            7899999999999     2222222                    2223357788999999999999988763    258


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |.++||+|... ..+..+.+.++|++.+++|+.+++++++.+.|+|.+  .+++|++||.++..+.+....|+++|++++
T Consensus        73 d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  149 (240)
T PRK06101         73 ELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVA  149 (240)
T ss_pred             CEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHH
Confidence            99999999654 333446789999999999999999999999999964  368999999999999989999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +++++++.|+.++||+++.++||++.|++......            ......+|+++|+.++..+..
T Consensus       150 ~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        150 YFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF------------AMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999998654210            112245899999999877754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.6e-26  Score=183.25  Aligned_cols=197  Identities=18%  Similarity=0.252  Sum_probs=153.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |+|+||||++|||     ..+++.+.+.|.                   ++.++.+|++|+++++++++.+..   +++|
T Consensus         2 k~vlItG~sg~iG-----~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~---~~id   73 (225)
T PRK08177          2 RTALIIGASRGLG-----LGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQG---QRFD   73 (225)
T ss_pred             CEEEEeCCCchHH-----HHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence            7899999999999     445544443322                   355678999999999999998854   5799


Q ss_pred             EEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC---CCChhhHHhHH
Q 041276           79 ILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST---NLGTIYAATKG  154 (251)
Q Consensus        79 ~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~---~~~~~Y~~sK~  154 (251)
                      ++|||+|.... ..+..+.+.+++++.+++|+.+++.+++.+.|+|++. .+.++++||..+..+.   ..+..|+++|+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA  152 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence            99999998642 2456678899999999999999999999999999764 4789999998776543   35678999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.|+++++.|+.++||++|.|+||+++|++.....                 ..++++.++.++.++.......++..
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA-----------------PLDVETSVKGLVEQIEAASGKGGHRF  215 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC-----------------CCCHHHHHHHHHHHHHhCCccCCCce
Confidence            9999999999999999999999999999999864321                 13567777777777654432233333


Q ss_pred             EEeCCC
Q 041276          235 ICVDGG  240 (251)
Q Consensus       235 i~vdgG  240 (251)
                      ++.+|+
T Consensus       216 ~~~~~~  221 (225)
T PRK08177        216 IDYQGE  221 (225)
T ss_pred             eCcCCc
Confidence            555554

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.4e-26  Score=185.65  Aligned_cols=200  Identities=20%  Similarity=0.283  Sum_probs=156.1

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||++|||                   +...+.++.+.....+.++.++.+|+++++++.++++       +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence            57999999999999                   2222333333333334457788899999998877653       489


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+||||||... ..+..+.+.+.++..+++|+.+++.+++.+++.|++.+.++||++||..+..+.+....|++||++++
T Consensus        75 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         75 DVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             CEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            99999999876 66778899999999999999999999999999999887799999999999888888889999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--------HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      .+++.++.++.+.||+++.|+||++.|++.......        ...........+. ...+++|+++.++.++..
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999876432211        0001101111222 235899998888887753

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=5.2e-26  Score=185.65  Aligned_cols=206  Identities=24%  Similarity=0.283  Sum_probs=164.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |+++||||+||||     ..+++.+.+.|.                  .+..+.+|+++.+++..+++.+....++++|.
T Consensus         3 k~vlVtGasg~IG-----~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIG-----LEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            7899999999999     444444443332                  24567899999999999999887754368999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ++|++|... ..+..+.+.+++++.+++|+.+++.+++.+++.|++.+.++||++||..+..+.+....|+++|++++.+
T Consensus        78 ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~  156 (256)
T PRK08017         78 LFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW  156 (256)
T ss_pred             EEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence            999999765 5567788999999999999999999999999999988889999999999999888899999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +++++.++.+.+++++.++||++.|++......................+.+|+|+++.+..++......
T Consensus       157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999877553221100000000000112468999999999999755443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.95  E-value=2.6e-26  Score=184.53  Aligned_cols=195  Identities=24%  Similarity=0.318  Sum_probs=164.2

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      -.|++++||||+.|||                   ++++|+++.+++.+. +.++.++.+|.++.+++.+-+.+....  
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--
Confidence            3569999999999999                   778999999998876 467889999999988744444443333  


Q ss_pred             CCccEEEEcccCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNY-TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      ..+.+||||+|... .+..+.+.+.+.+++.+++|..+...+++.++|.|.+++.|-||+++|.++..+.|.++.|+++|
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence            47999999999875 35567788888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +.+..|+++|+.|+..+||.|-.+.|..|.|+|.+...             |.-...+|+..|+..+.-..
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------------~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------------PSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------------CCCcCcCHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999986532             22223356666666555443

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.3e-25  Score=180.60  Aligned_cols=178  Identities=20%  Similarity=0.169  Sum_probs=133.8

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------------EEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------------TGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------------~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ...+++|+++|||||+|||     .++++.+.+.|.++                   .++.+|+++.+++++       .
T Consensus         9 ~~~l~~k~~lITGas~gIG-----~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367          9 QSTWQGKRIGITGASGALG-----KALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHH-----HHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-------h
Confidence            3457889999999999999     55555555444332                   346788988887654       3


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC---CCceEEEecccccccCCCCChhh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS---GAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      + +++|++|||||... .   .+.+.++|++.+++|+.+++.+++.++|+|+++   +++.+++.+|.++..+ +....|
T Consensus        77 ~-~~iDilVnnAG~~~-~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y  150 (245)
T PRK12367         77 L-ASLDVLILNHGINP-G---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSY  150 (245)
T ss_pred             c-CCCCEEEECCccCC-c---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchh
Confidence            4 78999999999753 2   346789999999999999999999999999873   2234545556555444 356789


Q ss_pred             HHhHHHHHHHH---HHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          150 AATKGAMNQLA---KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       150 ~~sK~a~~~~~---~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ++||+|+..+.   +.++.|+.+.|++|+.++||+++|++..                  ....+|+|+|+.+++.+..
T Consensus       151 ~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        151 EISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHHHHHHHHHhc
Confidence            99999986544   4444455778999999999999998731                  0135799999999999964

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.2e-25  Score=174.75  Aligned_cols=196  Identities=20%  Similarity=0.284  Sum_probs=157.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |+++||||+++||     ..+++.+.+.|.+                  +.++.+|+++.++++++++++..   +++|+
T Consensus         2 ~~vlvtG~sg~iG-----~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIG-----REFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDG---EALDA   73 (222)
T ss_pred             ceEEEEcCCCchh-----HHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcC---CCCCE
Confidence            6899999999999     5555555443322                  35689999999999998877632   47999


Q ss_pred             EEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC---hhhHHhHHH
Q 041276           80 LINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG---TIYAATKGA  155 (251)
Q Consensus        80 lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~---~~Y~~sK~a  155 (251)
                      +||++|.... ..+..+.+.++++..+++|+.+++.+++.+.|+|.+. .|++++++|..+..+....   ..|+++|++
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a  152 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKAA  152 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHHH
Confidence            9999998632 3455677899999999999999999999999998664 4899999998876653322   359999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.+++.++.++  .+++++.|+||+++|++.+..                 ...++++.+..+..++.......+|+.+
T Consensus       153 ~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (222)
T PRK06953        153 LNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ-----------------AALDPAQSVAGMRRVIAQATRRDNGRFF  213 (222)
T ss_pred             HHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC-----------------CCCCHHHHHHHHHHHHHhcCcccCceEE
Confidence            999999999885  479999999999999986421                 1236889999999887777778899999


Q ss_pred             EeCCCc
Q 041276          236 CVDGGF  241 (251)
Q Consensus       236 ~vdgG~  241 (251)
                      ..|++.
T Consensus       214 ~~~~~~  219 (222)
T PRK06953        214 QYDGVE  219 (222)
T ss_pred             eeCCcC
Confidence            988763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.5e-24  Score=169.15  Aligned_cols=200  Identities=25%  Similarity=0.308  Sum_probs=157.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHH-------------------hcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWK-------------------TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~-------------------~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      .|++|||||+++||     ..+++.+.                   .....+.++.+|++|.++++++++.+     +++
T Consensus         3 ~~~vlVtG~~g~iG-----~~l~~~l~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~i   72 (227)
T PRK08219          3 RPTALITGASRGIG-----AAIARELAPTHTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL-----GRL   72 (227)
T ss_pred             CCEEEEecCCcHHH-----HHHHHHHHhhCCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence            48999999999999     22221111                   11124678899999999998888653     589


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |++||++|... ..+..+.+.+.+.+.+++|+.+.+.+++.+++.|+++. +++|++||..+..+.++...|+.+|++++
T Consensus        73 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~~~y~~~K~a~~  150 (227)
T PRK08219         73 DVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALR  150 (227)
T ss_pred             CEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCCCchHHHHHHHHH
Confidence            99999999865 55667888999999999999999999999999998764 89999999999888888999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      .+++.++.++... ++++.+.||++.+++.......      .....+..++.+++|+|+.+++++....   +|++.++
T Consensus       151 ~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~------~~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~~  220 (227)
T PRK08219        151 ALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQ------EGGEYDPERYLRPETVAKAVRFAVDAPP---DAHITEV  220 (227)
T ss_pred             HHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhh------hccccCCCCCCCHHHHHHHHHHHHcCCC---CCccceE
Confidence            9999999988766 9999999999988865432111      1112244567899999999999996432   3555544


Q ss_pred             C
Q 041276          238 D  238 (251)
Q Consensus       238 d  238 (251)
                      +
T Consensus       221 ~  221 (227)
T PRK08219        221 V  221 (227)
T ss_pred             E
Confidence            3

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.91  E-value=7.7e-23  Score=175.43  Aligned_cols=181  Identities=21%  Similarity=0.176  Sum_probs=133.9

Q ss_pred             CCCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------------eeEEEeccCCCHHHHHHHH
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------------KVTGSVCDASSRAEREKLM   66 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~~~~~~~   66 (251)
                      .......+++|+++|||||+|||     .++++++.+.|.                     .+..+.+|++|++++.+.+
T Consensus       169 ~~~ta~sl~gK~VLITGASgGIG-----~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l  243 (406)
T PRK07424        169 LMGTALSLKGKTVAVTGASGTLG-----QALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL  243 (406)
T ss_pred             hcCcccCCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh
Confidence            33344567899999999999999     444443333322                     3456778999988776544


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC----ceEEEecccccccC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA----GNIILVSSVCGVLS  142 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~----g~iv~vss~~~~~~  142 (251)
                              +++|++|||||... .   .+.+.+++++.+++|+.+++.+++.++|.|++++.    +.+|++|+ ++ ..
T Consensus       244 --------~~IDiLInnAGi~~-~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~  309 (406)
T PRK07424        244 --------EKVDILIINHGINV-H---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VN  309 (406)
T ss_pred             --------CCCCEEEECCCcCC-C---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-cc
Confidence                    68999999999754 2   36788999999999999999999999999987642    34555554 33 33


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      .+....|++||+|+..++. ++++.  .++.+..++||+++|++..                 . ...+||++|+.++++
T Consensus       310 ~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------------~-~~~spe~vA~~il~~  368 (406)
T PRK07424        310 PAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----------------I-GVMSADWVAKQILKL  368 (406)
T ss_pred             CCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----------------C-CCCCHHHHHHHHHHH
Confidence            3445689999999999985 54443  4577778889999888631                 1 135899999999999


Q ss_pred             cCCCCC
Q 041276          223 CMPAAS  228 (251)
Q Consensus       223 ~~~~~~  228 (251)
                      +.....
T Consensus       369 i~~~~~  374 (406)
T PRK07424        369 AKRDFR  374 (406)
T ss_pred             HHCCCC
Confidence            976544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=8.3e-22  Score=197.54  Aligned_cols=140  Identities=13%  Similarity=0.085  Sum_probs=124.1

Q ss_pred             HHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHH
Q 041276           40 REWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA  119 (251)
Q Consensus        40 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  119 (251)
                      +.+.+.|.++.++.+|++|.++++++++++.+.  ++||+||||||+.. ...+.+.+.++|++++++|+.+.+++++++
T Consensus      2087 a~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al 2163 (2582)
T TIGR02813      2087 AAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKVDGLLSLLAAL 2163 (2582)
T ss_pred             HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455778899999999999999999999876  47999999999876 677889999999999999999999998887


Q ss_pred             HHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC
Q 041276          120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE  188 (251)
Q Consensus       120 ~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~  188 (251)
                      .+.+.    ++||++||+++..+.++...|+++|++++.+++.++.++.  +++|++|+||+.+|+|..
T Consensus      2164 ~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2164 NAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            66443    5799999999999999999999999999999999999864  499999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=4.3e-20  Score=141.79  Aligned_cols=156  Identities=25%  Similarity=0.309  Sum_probs=127.4

Q ss_pred             CEEEEecCCCCcCcHH--------------------H---HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           18 MTALVTGGTKGLGNEA--------------------E---LNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        18 k~vlItGas~giG~~~--------------------~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      |+++||||++|||..-                    .   .....+.++..+.++.++.+|++++++++++++++...+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL-   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            6799999999999110                    0   001123333345567789999999999999999999888 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|.+||++|... ..+..+.+.++++..+++|+.+++.+++.+    ++.+.++++++||..+..+.+.+..|+++|+
T Consensus        80 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       80 GPLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CCeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            89999999999865 456678889999999999999999999987    3445589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFIT  183 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~  183 (251)
                      ++..+++.++.    .++++..+.||++.
T Consensus       155 ~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999976654    58889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=2.3e-19  Score=157.86  Aligned_cols=205  Identities=14%  Similarity=0.084  Sum_probs=144.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-----cC----CeeEEEeccCCCHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-----KC----FKVTGSVCDASSRAEREK   64 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-----~~----~~~~~~~~D~~~~~~~~~   64 (251)
                      ...+||+||||||+||||                   +.+++..+.+.+..     .+    .++.++.+|+++.+++.+
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            345789999999999999                   23333333333322     11    247788999999988766


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCC
Q 041276           65 LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LST  143 (251)
Q Consensus        65 ~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~  143 (251)
                      .+        +++|+||||+|... .      ...++...+++|+.+..++++++.    +.+.++||++||.++. .+.
T Consensus       156 aL--------ggiDiVVn~AG~~~-~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~  216 (576)
T PLN03209        156 AL--------GNASVVICCIGASE-K------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGF  216 (576)
T ss_pred             Hh--------cCCCEEEEcccccc-c------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCc
Confidence            44        68999999999653 1      112467789999999998888874    4456899999998764 222


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +. ..|. +|+++..+.+.++.++...||+++.|+||++.+++.... ..... .......+.++..+.+|||+.+++|+
T Consensus       217 p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isreDVA~vVvfLa  292 (576)
T PLN03209        217 PA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNLQVAELMACMA  292 (576)
T ss_pred             cc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHHHHHHHHHHHH
Confidence            22 2344 788888888999999999999999999999998865421 11111 11112246677889999999999999


Q ss_pred             CCCCCCccccEEEeCCCc
Q 041276          224 MPAASYITGQTICVDGGF  241 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~  241 (251)
                      ++... -.++++.+-.|-
T Consensus       293 sd~~a-s~~kvvevi~~~  309 (576)
T PLN03209        293 KNRRL-SYCKVVEVIAET  309 (576)
T ss_pred             cCchh-ccceEEEEEeCC
Confidence            85432 236777766654

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.81  E-value=5.1e-19  Score=137.92  Aligned_cols=207  Identities=20%  Similarity=0.180  Sum_probs=162.0

Q ss_pred             CCEEEEecCCCCcC------------------------cHHHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLG------------------------NEAELNECLREWKTK----CFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        17 ~k~vlItGas~giG------------------------~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      .|++||||++||||                        +.++.+++.+.+++.    ..++.++..|+++..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            49999999999999                        556777777777765    35788999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCC--------------------------CCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKP--------------------------TVEYMAEDLSFLMSTNFESAYHLSQLAHPL  122 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~--------------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  122 (251)
                      +.++| .++|.++.|||.+..++-                          ....+.+.+...|+.|++|++.+.+.+.|+
T Consensus        83 i~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   83 IKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999 899999999998652211                          113466788999999999999999999999


Q ss_pred             HHhCCCceEEEecccccccC---------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC
Q 041276          123 LKASGAGNIILVSSVCGVLS---------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD  193 (251)
Q Consensus       123 m~~~~~g~iv~vss~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~  193 (251)
                      +..++...+|++||..+...         ..+...|..||.++.-+.-.+-+.+.+.|+--..++||..-|.+...+...
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~  241 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNP  241 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhhh
Confidence            99988889999999887643         345678999999999999888888888899999999999999988766543


Q ss_pred             HH----HHHHHhhCCCCCCC--CCHHHHHHHHHHHcC
Q 041276          194 EK----FLEEVKCRTPMERP--GEPKEVSSLVAFLCM  224 (251)
Q Consensus       194 ~~----~~~~~~~~~~~~~~--~~~~dva~~~~~l~~  224 (251)
                      --    ....+..+.-...+  .+|--.|.+.+|+.-
T Consensus       242 ~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l  278 (341)
T KOG1478|consen  242 FTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTL  278 (341)
T ss_pred             HHHHHHHHHHHHHHHhcCcccccCccccccchhhhhh
Confidence            11    11112222111112  355567777777763

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.81  E-value=2.5e-18  Score=145.14  Aligned_cols=194  Identities=15%  Similarity=0.106  Sum_probs=137.0

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhc------------------------CCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTK------------------------CFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~------------------------~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +++|+||||||+|+||     ..+++.+.+.                        ..++.++.+|++|++.+.+++    
T Consensus         2 ~~~k~vLVTGatG~IG-----~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~----   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFG-----KAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL----   72 (324)
T ss_pred             cCCCEEEEeCCCCHHH-----HHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH----
Confidence            4689999999999999     3333332221                        124667889999999888776    


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                          .++|+|||+||... . +..+.++   .+.+++|+.+++++++++.+    .+.++||++||.....+   ...|+
T Consensus        73 ----~~iD~Vih~Ag~~~-~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~  136 (324)
T TIGR03589        73 ----RGVDYVVHAAALKQ-V-PAAEYNP---FECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYG  136 (324)
T ss_pred             ----hcCCEEEECcccCC-C-chhhcCH---HHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHH
Confidence                36999999999753 1 2223333   46899999999999999854    44579999999765433   46799


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC---CCC------CCCCCHHHHHHHHHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR---TPM------ERPGEPKEVSSLVAF  221 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~~~~~  221 (251)
                      +||++.+.+++.++.+....|++++.+.||.+.+|-.. .  .+.+.......   .+.      ..+..++|++++++.
T Consensus       137 ~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~--i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~  213 (324)
T TIGR03589       137 ATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-V--VPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLK  213 (324)
T ss_pred             HHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-c--HHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHH
Confidence            99999999999998888888999999999999987432 1  12222222211   222      125689999999988


Q ss_pred             HcCCCCCCccccEEEeCCC
Q 041276          222 LCMPAASYITGQTICVDGG  240 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG  240 (251)
                      ++...   ..|+.+ +..|
T Consensus       214 al~~~---~~~~~~-~~~~  228 (324)
T TIGR03589       214 SLERM---LGGEIF-VPKI  228 (324)
T ss_pred             HHhhC---CCCCEE-ccCC
Confidence            88532   235555 4443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.78  E-value=3.8e-18  Score=132.14  Aligned_cols=154  Identities=21%  Similarity=0.317  Sum_probs=119.9

Q ss_pred             EEEEecCCCCcC--------------------c---HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           19 TALVTGGTKGLG--------------------N---EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        19 ~vlItGas~giG--------------------~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      ++|||||.+|||                    +   ....++..+++++.+.++.++.+|++|+++++++++++.+.+ +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence            789999999999                    2   124457888888889999999999999999999999999998 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +||.|||+||... ..++.+.+.++++..+...+.+..++.+.+    ...+...+|++||+++..+.++...|+++.+.
T Consensus        81 ~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~----~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   81 PIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEAL----ENRPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             -EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHH----TTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             Ccceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHh----hcCCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            9999999999976 778889999999999999999999998887    44555789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcc
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFI  182 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v  182 (251)
                      ++.|++..+.    .|.++.+|.-|+.
T Consensus       156 lda~a~~~~~----~g~~~~sI~wg~W  178 (181)
T PF08659_consen  156 LDALARQRRS----RGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHH----TTSEEEEEEE-EB
T ss_pred             HHHHHHHHHh----CCCCEEEEEcccc
Confidence            9999886544    3667777776543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.78  E-value=2.8e-17  Score=138.07  Aligned_cols=176  Identities=13%  Similarity=0.061  Sum_probs=130.3

Q ss_pred             CCCCEEEEecCCCCcCcH--------------------HH------------HHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 041276           15 LQGMTALVTGGTKGLGNE--------------------AE------------LNECLREWKTKCFKVTGSVCDASSRAER   62 (251)
Q Consensus        15 l~~k~vlItGas~giG~~--------------------~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~~   62 (251)
                      -.+|++||||+|+|||..                    ..            .+.+.+.+.+.+..+..+.+|+++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAFGAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHHHcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            357999999999999911                    00            1122333444456677899999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCCCC----------------CC-----------------CCCHHHHHHHHHhhh
Q 041276           63 EKLMKQVSSLFNGKLNILINNVGTNYTTKP----------------TV-----------------EYMAEDLSFLMSTNF  109 (251)
Q Consensus        63 ~~~~~~i~~~~~~~id~lv~~ag~~~~~~~----------------~~-----------------~~~~~~~~~~~~~n~  109 (251)
                      +++++++.+.+ |++|+||||+|...+..|                +.                 ..+.++++..+.+.=
T Consensus       119 ~~lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        119 QKVIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            99999999999 899999999998743221                11                 234455555544332


Q ss_pred             H---HHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC--hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccC
Q 041276          110 E---SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT  184 (251)
Q Consensus       110 ~---~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t  184 (251)
                      .   -.+.=++...+.|.  +++++|-+|.+......|.+  +..+.+|++++.-++.|+.+|++.|+|+|++.+|++.|
T Consensus       198 gedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T  275 (398)
T PRK13656        198 GEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVT  275 (398)
T ss_pred             cchHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccc
Confidence            2   12222344445553  45899999999998888877  58999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC
Q 041276          185 PLTEPYLSD  193 (251)
Q Consensus       185 ~~~~~~~~~  193 (251)
                      .-.+....-
T Consensus       276 ~Ass~Ip~~  284 (398)
T PRK13656        276 QASSAIPVM  284 (398)
T ss_pred             hhhhcCCCc
Confidence            877665443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=3.7e-17  Score=138.09  Aligned_cols=198  Identities=15%  Similarity=0.179  Sum_probs=136.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------------CeeEEEeccCCCHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------------FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ++|+||||||+|+||     ..+++.+.+.|                          .++.++.+|+++.+++++++   
T Consensus         4 ~~k~vlVtG~~G~IG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---   75 (325)
T PLN02989          4 GGKVVCVTGASGYIA-----SWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI---   75 (325)
T ss_pred             CCCEEEEECCchHHH-----HHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH---
Confidence            479999999999999     33333333222                          24667788999998888777   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-----
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-----  144 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----  144 (251)
                           .++|+|||+||... .    ..+.+.+...+++|+.+++++++++.+.+   +.++||++||.+++.+..     
T Consensus        76 -----~~~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~  142 (325)
T PLN02989         76 -----DGCETVFHTASPVA-I----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGP  142 (325)
T ss_pred             -----cCCCEEEEeCCCCC-C----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCC
Confidence                 36999999999643 1    22334578899999999999999987653   246999999987653311     


Q ss_pred             -----------------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHh-hCCC
Q 041276          145 -----------------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVK-CRTP  205 (251)
Q Consensus       145 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~-~~~~  205 (251)
                                       ....|+.||.+.+.+++.++++   +++.+..+.|+.+.+|....... ......... ...+
T Consensus       143 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~  219 (325)
T PLN02989        143 NDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP  219 (325)
T ss_pred             CCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC
Confidence                             0136999999999999888765   47999999999999987543211 112222222 2222


Q ss_pred             C----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          206 M----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       206 ~----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                      .    ..+..++|+|++++.++....  ..| .+.++|+
T Consensus       220 ~~~~~r~~i~v~Dva~a~~~~l~~~~--~~~-~~ni~~~  255 (325)
T PLN02989        220 FNTTHHRFVDVRDVALAHVKALETPS--ANG-RYIIDGP  255 (325)
T ss_pred             CCCcCcCeeEHHHHHHHHHHHhcCcc--cCc-eEEEecC
Confidence            2    245668999999988875432  234 6677544

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.78  E-value=6e-17  Score=138.15  Aligned_cols=206  Identities=15%  Similarity=-0.011  Sum_probs=141.2

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------------eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF-----------------------KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------------~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++|+||||||+|+||     ..+++.+.+.|.                       ++.++.+|+++.+++.+++++   
T Consensus         2 ~~~k~ilItGatG~IG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKG-----SWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---   73 (349)
T ss_pred             cCCCEEEEECCCChhH-----HHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---
Confidence            4679999999999999     444444443332                       344678899999998888875   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccccccc---------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVL---------  141 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~---------  141 (251)
                         .++|+|||+|+... .    ..+.+++...+++|+.+++.+++++.    +.+ .+++|++||...+.         
T Consensus        74 ---~~~d~vih~A~~~~-~----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~iv~~SS~~vyg~~~~~~~~~  141 (349)
T TIGR02622        74 ---FKPEIVFHLAAQPL-V----RKSYADPLETFETNVMGTVNLLEAIR----AIGSVKAVVNVTSDKCYRNDEWVWGYR  141 (349)
T ss_pred             ---cCCCEEEECCcccc-c----ccchhCHHHHHHHhHHHHHHHHHHHH----hcCCCCEEEEEechhhhCCCCCCCCCc
Confidence               36999999999543 1    23445667889999999999999873    222 46899999964432         


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHHcc----CCeEEEEEecCcccCCCCCCC-CCCHHHHHHHhhCCC--------
Q 041276          142 ---STNLGTIYAATKGAMNQLAKNLACEWAR----DNIRINSVAPWFITTPLTEPY-LSDEKFLEEVKCRTP--------  205 (251)
Q Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~--------  205 (251)
                         +..+...|+.||.+.+.+++.++.++.+    ++++++.+.|+.+.+|..... .-.+.+........+        
T Consensus       142 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  221 (349)
T TIGR02622       142 ETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDA  221 (349)
T ss_pred             cCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCc
Confidence               1234568999999999999999988754    489999999999988743110 111233333322211        


Q ss_pred             CCCCCCHHHHHHHHHHHcCCC--CCCccccEEEeCCC
Q 041276          206 MERPGEPKEVSSLVAFLCMPA--ASYITGQTICVDGG  240 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~--~~~~~G~~i~vdgG  240 (251)
                      ...+...+|++++++.++...  .....|+.++|.+|
T Consensus       222 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       222 TRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             ccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            123456889999988776421  11123578888754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.75  E-value=4.1e-16  Score=133.29  Aligned_cols=204  Identities=13%  Similarity=0.086  Sum_probs=141.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      |+||||||+|+||     ..+++.|.+.+.                         ++.++.+|++|.++++++++.    
T Consensus         2 ~~vlVtGatGfIG-----~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   72 (355)
T PRK10217          2 RKILITGGAGFIG-----SALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTE----   72 (355)
T ss_pred             cEEEEEcCCcHHH-----HHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhh----
Confidence            6899999999999     555555544331                         244667899999998888764    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH---h--CCCceEEEeccccccc------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK---A--SGAGNIILVSSVCGVL------  141 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~---~--~~~g~iv~vss~~~~~------  141 (251)
                        .++|.|||+||... .    ..+.+.++..+++|+.+++.+++++.+.|.   +  .+..++|++||.+.+.      
T Consensus        73 --~~~D~Vih~A~~~~-~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  145 (355)
T PRK10217         73 --HQPDCVMHLAAESH-V----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD  145 (355)
T ss_pred             --cCCCEEEECCcccC-c----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC
Confidence              36999999999653 1    233456788999999999999999987642   1  2235899999864322      


Q ss_pred             -------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCC--C-------
Q 041276          142 -------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT--P-------  205 (251)
Q Consensus       142 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~-------  205 (251)
                             +..+...|+.||.+.+.+++.++++   .++++..+.|+.+..|-.........+........  +       
T Consensus       146 ~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  222 (355)
T PRK10217        146 DFFTETTPYAPSSPYSASKASSDHLVRAWLRT---YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQ  222 (355)
T ss_pred             CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCe
Confidence                   1234568999999999999998877   46777888888887765321100112222222211  1       


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ...+..++|+++++..++...   ..|+.+++.+|..+
T Consensus       223 ~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        223 IRDWLYVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             eeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            123567999999998887532   35788999888654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.73  E-value=1.4e-15  Score=133.28  Aligned_cols=207  Identities=10%  Similarity=0.020  Sum_probs=140.6

Q ss_pred             CcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------------------------Ce
Q 041276           10 QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------------------------FK   48 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------------------------~~   48 (251)
                      .....+++|+||||||+|+||     ..+++.|.+.|                                         .+
T Consensus        40 ~~~~~~~~k~VLVTGatGfIG-----s~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  114 (442)
T PLN02572         40 GSSSSSKKKKVMVIGGDGYCG-----WATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKE  114 (442)
T ss_pred             CCCccccCCEEEEECCCcHHH-----HHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCc
Confidence            345678899999999999999     44444444332                                         13


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC
Q 041276           49 VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA  128 (251)
Q Consensus        49 ~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~  128 (251)
                      +.++.+|++|.+.+.++++.      .++|+|||+|+...  ......+++++...+++|+.+++++++++...    +.
T Consensus       115 v~~v~~Dl~d~~~v~~~l~~------~~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv  182 (442)
T PLN02572        115 IELYVGDICDFEFLSEAFKS------FEPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----AP  182 (442)
T ss_pred             ceEEECCCCCHHHHHHHHHh------CCCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CC
Confidence            56778999999999888875      27999999997532  23344556677888999999999999987443    32


Q ss_pred             -ceEEEecccccccC------------------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCccc
Q 041276          129 -GNIILVSSVCGVLS------------------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFIT  183 (251)
Q Consensus       129 -g~iv~vss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~  183 (251)
                       .++|++||...+..                        ..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+.
T Consensus       183 ~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vy  259 (442)
T PLN02572        183 DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVY  259 (442)
T ss_pred             CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEeccccc
Confidence             48999998764321                        112347999999999999887765   68999999999998


Q ss_pred             CCCCCCCC-----------------CCHHHHHHHhhCCCC---------CCCCCHHHHHHHHHHHcCCCCCCccc--cEE
Q 041276          184 TPLTEPYL-----------------SDEKFLEEVKCRTPM---------ERPGEPKEVSSLVAFLCMPAASYITG--QTI  235 (251)
Q Consensus       184 t~~~~~~~-----------------~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G--~~i  235 (251)
                      .|......                 ....+........+.         ..+..++|++++++.++....  ..|  ..+
T Consensus       260 Gp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~  337 (442)
T PLN02572        260 GVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVF  337 (442)
T ss_pred             CCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEE
Confidence            87543210                 001112222112121         134679999999988885321  234  356


Q ss_pred             EeC
Q 041276          236 CVD  238 (251)
Q Consensus       236 ~vd  238 (251)
                      ++.
T Consensus       338 Nig  340 (442)
T PLN02572        338 NQF  340 (442)
T ss_pred             EeC
Confidence            664

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.72  E-value=1e-15  Score=130.09  Aligned_cols=207  Identities=14%  Similarity=0.020  Sum_probs=133.8

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------------------eeEEEeccCCCHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-----------------------------KVTGSVCDASSRAEREK   64 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~D~~~~~~~~~   64 (251)
                      ++++|+||||||+|+||     ..+++.|.+.|.                             ++.++.+|++|.+++.+
T Consensus         3 ~~~~~~vlVTGatGfiG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   77 (340)
T PLN02653          3 DPPRKVALITGITGQDG-----SYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR   77 (340)
T ss_pred             CCCCCEEEEECCCCccH-----HHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence            56789999999999999     555555544332                             34567789999999998


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEecccccccC-
Q 041276           65 LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLS-  142 (251)
Q Consensus        65 ~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~~~~-  142 (251)
                      +++.+      ++|+|||+|+... ..    ...+.....+++|+.++..+++++.+++.+++. -++|++||...+.. 
T Consensus        78 ~~~~~------~~d~Vih~A~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~  146 (340)
T PLN02653         78 WLDDI------KPDEVYNLAAQSH-VA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST  146 (340)
T ss_pred             HHHHc------CCCEEEECCcccc-hh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC
Confidence            88753      6999999999754 11    222345677899999999999999887654311 27888887533321 


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHHcc---CCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCC--C---
Q 041276          143 ---------TNLGTIYAATKGAMNQLAKNLACEWAR---DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT--P---  205 (251)
Q Consensus       143 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~---~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~---  205 (251)
                               ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+. ..  ...+........  +   
T Consensus       147 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~  223 (340)
T PLN02653        147 PPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT-RK--ITRAVGRIKVGLQKKLFL  223 (340)
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccch-hH--HHHHHHHHHcCCCCceEe
Confidence                     123567999999999999999887532   223344444543221110 00  011111111111  1   


Q ss_pred             -----CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          206 -----MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       206 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                           ...+...+|+|++++.++...    .+..+++.+|..+
T Consensus       224 g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~  262 (340)
T PLN02653        224 GNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESH  262 (340)
T ss_pred             CCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCce
Confidence                 124467999999999888532    1456778777644

>PRK06720 hypothetical protein; Provisional

Probab=99.72  E-value=2.4e-16  Score=120.33  Aligned_cols=127  Identities=14%  Similarity=0.156  Sum_probs=101.3

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.+++|+++||||++|||                   +.+.+++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            557899999999999999                   3344555556666556677889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-------CceEEEecccccccCC
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-------AGNIILVSSVCGVLST  143 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-------~g~iv~vss~~~~~~~  143 (251)
                       +++|++|||||......++.+.+++. ++  .+|+.+.+++++.+.++|++++       .|++..||+.+..++.
T Consensus        92 -G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (169)
T PRK06720         92 -SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSFHT  164 (169)
T ss_pred             -CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccccee
Confidence             89999999999876455555555555 33  7778888999999999988764       5889999988776543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.71  E-value=1.9e-15  Score=127.57  Aligned_cols=198  Identities=15%  Similarity=0.163  Sum_probs=132.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------------CeeEEEeccCCCHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------------FKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      -.||+||||||+|+||     ..+++.+.+.|                          .++.++.+|++++++++++++ 
T Consensus         3 ~~~~~vlVTGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIA-----SWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-   76 (322)
T ss_pred             CCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-
Confidence            4679999999999999     33333333222                          245667788888887777773 


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CC----
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-ST----  143 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~----  143 (251)
                             ++|+|||+|+... ..   ..  +...+.+++|+.++.++++++...   .+.++||++||.++.. +.    
T Consensus        77 -------~~d~vih~A~~~~-~~---~~--~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~  140 (322)
T PLN02986         77 -------GCDAVFHTASPVF-FT---VK--DPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIE  140 (322)
T ss_pred             -------CCCEEEEeCCCcC-CC---CC--CchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCC
Confidence                   5999999999643 11   11  123567899999999999886321   2346899999986531 11    


Q ss_pred             ------------C-----CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCC
Q 041276          144 ------------N-----LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTP  205 (251)
Q Consensus       144 ------------~-----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~  205 (251)
                                  +     ....|+.||.+.+.+++.+.++   ++++++.++|+.+.+|...+... .......+....+
T Consensus       141 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  217 (322)
T PLN02986        141 ANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN  217 (322)
T ss_pred             CCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC
Confidence                        0     1346999999999988887665   48999999999999987543211 1222222222211


Q ss_pred             -----CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          206 -----MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       206 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                           ...+..++|+|++++.++....  ..| .+.++|+
T Consensus       218 ~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        218 LFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             CCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence                 1246789999999998885432  234 6777543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.69  E-value=1.5e-14  Score=105.88  Aligned_cols=205  Identities=17%  Similarity=0.213  Sum_probs=158.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE--------------eccCCCHHHHHHHHHHHHHhcC-CCccEEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS--------------VCDASSRAEREKLMKQVSSLFN-GKLNILI   81 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~--------------~~D~~~~~~~~~~~~~i~~~~~-~~id~lv   81 (251)
                      ..+|+|.||-+.+|     .++.+.++..+..+..+              ..|-+--++-+.+++++-+.++ .++|.++
T Consensus         3 agrVivYGGkGALG-----Sacv~~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    3 AGRVIVYGGKGALG-----SACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             CceEEEEcCcchHh-----HHHHHHHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            46899999999999     89999998875443222              2222223455556666655442 5799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK  161 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  161 (251)
                      +.||.+.........-..+-+-++...++..-...+.+..+++..  |.+-..+..++..+.|+...|+++|+|+..+++
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G--GLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~  155 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG--GLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTS  155 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC--ceeeecccccccCCCCcccchhHHHHHHHHHHH
Confidence            999987633322233345567788888888888888888877653  677788888899999999999999999999999


Q ss_pred             HHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          162 NLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       162 ~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      +|+.+-.  +.|--+..|.|-..+|||.++.+++.++          ..+...+.+++..+.+..+.++.-+|..+.+.
T Consensus       156 SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----------ssWTPL~fi~e~flkWtt~~~RPssGsLlqi~  224 (236)
T KOG4022|consen  156 SLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----------SSWTPLSFISEHFLKWTTETSRPSSGSLLQIT  224 (236)
T ss_pred             HhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----------cCcccHHHHHHHHHHHhccCCCCCCCceEEEE
Confidence            9999864  5677889999999999999999887553          34556789999999999999999999988764

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.68  E-value=8.1e-15  Score=124.53  Aligned_cols=187  Identities=16%  Similarity=0.113  Sum_probs=127.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      ++++|+||||||+|.||     ..+++.+.+.|.                         ++.++.+|++|++++.+++  
T Consensus         6 ~~~~~~vlItG~~GfIG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--   78 (338)
T PLN00198          6 PTGKKTACVIGGTGFLA-----SLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPI--   78 (338)
T ss_pred             CCCCCeEEEECCchHHH-----HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH--
Confidence            45689999999999999     444444443332                         3556778888888777766  


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----  143 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----  143 (251)
                            .++|+|||+|+...    ...  .+.....+++|+.++..+++++.+.   .+.++||++||.+.+...     
T Consensus        79 ------~~~d~vih~A~~~~----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~  143 (338)
T PLN00198         79 ------AGCDLVFHVATPVN----FAS--EDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGT  143 (338)
T ss_pred             ------hcCCEEEEeCCCCc----cCC--CChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCC
Confidence                  46999999998532    111  1224567899999999999997442   234699999997654311     


Q ss_pred             -------------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-HHHHHHHhhC
Q 041276          144 -------------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCR  203 (251)
Q Consensus       144 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~  203 (251)
                                         ++...|+.||.+.+.+++.++.+   +|+++..+.|+.+.+|......+. -.........
T Consensus       144 ~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~  220 (338)
T PLN00198        144 GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG  220 (338)
T ss_pred             CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcC
Confidence                               12446999999999999888775   589999999999988864321111 0011111110


Q ss_pred             ----------CC----CCCCCCHHHHHHHHHHHcCC
Q 041276          204 ----------TP----MERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       204 ----------~~----~~~~~~~~dva~~~~~l~~~  225 (251)
                                .+    ...+..++|++++++.++..
T Consensus       221 ~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        221 NEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             CccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence                      01    12467899999999988864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.68  E-value=1.5e-14  Score=123.67  Aligned_cols=193  Identities=13%  Similarity=0.095  Sum_probs=129.4

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------CeeEEEeccCCCHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..-++++||||||+|.||     ..+++.+.+.|                       .++.++.+|+++.+.+.+++   
T Consensus         6 ~~~~~~~vLVtG~~GfIG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---   77 (353)
T PLN02896          6 RESATGTYCVTGATGYIG-----SWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV---   77 (353)
T ss_pred             cccCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH---
Confidence            345678999999999999     44444443332                       34667788999998887776   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDL--SFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----  143 (251)
                           .++|.|||+|+...........+++.+  ...++.|+.+++.+++++.+..   +.++||++||.+.+...    
T Consensus        78 -----~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~  149 (353)
T PLN02896         78 -----KGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNG  149 (353)
T ss_pred             -----cCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCC
Confidence                 368999999997642211122233333  4577888899999999875432   24689999997654311    


Q ss_pred             ---------------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHH
Q 041276          144 ---------------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEV  200 (251)
Q Consensus       144 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~  200 (251)
                                           +....|+.||.+.+.+++.++++   +++++..+.|+.+.+|......+.  ......+
T Consensus       150 ~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~  226 (353)
T PLN02896        150 RWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPI  226 (353)
T ss_pred             CCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHh
Confidence                                 01137999999999999888765   489999999999988865432221  1111111


Q ss_pred             hhCCC-------------CCCCCCHHHHHHHHHHHcC
Q 041276          201 KCRTP-------------MERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       201 ~~~~~-------------~~~~~~~~dva~~~~~l~~  224 (251)
                      .....             ...+..++|+|++++.++.
T Consensus       227 ~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~  263 (353)
T PLN02896        227 TGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLME  263 (353)
T ss_pred             cCCccccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence            11100             1135689999999998885

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.68  E-value=8.3e-15  Score=125.10  Aligned_cols=203  Identities=15%  Similarity=0.093  Sum_probs=135.4

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------------CeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKC-------------------------FKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~-------------------------~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +||||||+|+||     ..+++.|.+.+                         .++.++.+|++|.+++.+++++     
T Consensus         2 kilITGgtG~iG-----~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   71 (352)
T PRK10084          2 KILVTGGAGFIG-----SAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQ-----   71 (352)
T ss_pred             eEEEECCCcHHh-----HHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHh-----
Confidence            699999999999     44444443322                         2345678999999999888864     


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCceEEEecccccccC------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-----GAGNIILVSSVCGVLS------  142 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~g~iv~vss~~~~~~------  142 (251)
                       .++|+|||+|+......     ..+..+..+++|+.++.++++++.++|+..     +..++|++||...+..      
T Consensus        72 -~~~d~vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         72 -HQPDAVMHLAAESHVDR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             -cCCCEEEECCcccCCcc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence             37999999999653111     122346689999999999999998876432     2348999998643321      


Q ss_pred             ---------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCC--C
Q 041276          143 ---------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT--P  205 (251)
Q Consensus       143 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~  205 (251)
                                     ..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|...................  +
T Consensus       146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  222 (352)
T PRK10084        146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (352)
T ss_pred             ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeE
Confidence                           1234689999999999999988774   5666667777777664211100122222222211  1


Q ss_pred             C-------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          206 M-------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       206 ~-------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .       ..+..++|+++++..++...   ..|+.+.+.+|...
T Consensus       223 ~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        223 IYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence            1       12457899999998887532   24778888777543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.68  E-value=1.1e-14  Score=122.13  Aligned_cols=201  Identities=13%  Similarity=0.079  Sum_probs=136.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcC--C------------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKC--F------------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~--~------------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +|+||||+|+||     ..+++++.+.+  .                        ++.++.+|+++++++.++++.    
T Consensus         1 ~ilItGatG~iG-----~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   71 (317)
T TIGR01181         1 RILVTGGAGFIG-----SNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTE----   71 (317)
T ss_pred             CEEEEcCCchHH-----HHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhh----
Confidence            489999999999     55555554332  1                        345667899999998888764    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC----------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS----------  142 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~----------  142 (251)
                        -++|+|||+|+... .    +.+.+..+..+++|+.++..+++.+.+.+.   ..++|++||...+..          
T Consensus        72 --~~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~  141 (317)
T TIGR01181        72 --HQPDAVVHFAAESH-V----DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTET  141 (317)
T ss_pred             --cCCCEEEEcccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCC
Confidence              26999999999754 1    223345667899999999999988754432   247999998543221          


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC---------CCCC
Q 041276          143 --TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME---------RPGE  211 (251)
Q Consensus       143 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  211 (251)
                        ......|+.+|.+.+.+++.++.+   .++++..+.|+.+..+......-.+.+........+..         .+..
T Consensus       142 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (317)
T TIGR01181       142 TPLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLY  218 (317)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEE
Confidence              123347999999999999988776   47889999999888775432111122223333222211         2346


Q ss_pred             HHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++|+++++..++...   ..|+.+.+.+|..++
T Consensus       219 v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       219 VEDHCRAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             HHHHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence            899999999888542   357888887776543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.67  E-value=1e-14  Score=124.54  Aligned_cols=184  Identities=13%  Similarity=0.115  Sum_probs=126.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------------eeEEEeccCCCHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------------KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------------~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +.|+||||||+|.||     ..+++.|.+.+.                          ++.++..|+++.+.+++++   
T Consensus         4 ~~k~iLVTGatGfIG-----s~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---   75 (351)
T PLN02650          4 QKETVCVTGASGFIG-----SWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI---   75 (351)
T ss_pred             CCCEEEEeCCcHHHH-----HHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH---
Confidence            468999999999999     444444433322                          3556778888888877776   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----C-
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----N-  144 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----~-  144 (251)
                           ..+|.|||+|+... ..   ..  +.....+++|+.+++++++++.+..   ..++||++||...+.+.    + 
T Consensus        76 -----~~~d~ViH~A~~~~-~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~  141 (351)
T PLN02650         76 -----RGCTGVFHVATPMD-FE---SK--DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPV  141 (351)
T ss_pred             -----hCCCEEEEeCCCCC-CC---CC--CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCc
Confidence                 35899999998643 11   11  2235778999999999999985532   13689999997543211    0 


Q ss_pred             -----------------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHH---HhhC-
Q 041276          145 -----------------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE---VKCR-  203 (251)
Q Consensus       145 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~---~~~~-  203 (251)
                                       ....|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|........ .+...   .... 
T Consensus       142 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~  217 (351)
T PLN02650        142 YDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPP-SLITALSLITGNE  217 (351)
T ss_pred             cCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcCCc
Confidence                             1137999999999999988776   689999999999999865443222 11111   1111 


Q ss_pred             -----CCCCCCCCHHHHHHHHHHHcCC
Q 041276          204 -----TPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       204 -----~~~~~~~~~~dva~~~~~l~~~  225 (251)
                           .....+..++|+|++++.++..
T Consensus       218 ~~~~~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        218 AHYSIIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cccCcCCCcceeeHHHHHHHHHHHhcC
Confidence                 1123567899999999998864

>PLN02214 cinnamoyl-CoA reductase

Probab=99.67  E-value=1.5e-14  Score=123.07  Aligned_cols=181  Identities=13%  Similarity=0.114  Sum_probs=125.3

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------------CeeEEEeccCCCHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC-------------------------FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-------------------------~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +++|+||||||+|.||     ..+++.|.++|                         .++.++.+|+++.+++.+++   
T Consensus         8 ~~~~~vlVTGatGfIG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---   79 (342)
T PLN02214          8 PAGKTVCVTGAGGYIA-----SWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI---   79 (342)
T ss_pred             CCCCEEEEECCCcHHH-----HHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH---
Confidence            5679999999999999     33333322221                         24667788999988888777   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----C-
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----N-  144 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----~-  144 (251)
                           .++|+|||+|+...          +.+.+.+++|+.++.++++++.    +.+.++||++||.++..+.    + 
T Consensus        80 -----~~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~  140 (342)
T PLN02214         80 -----DGCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPE  140 (342)
T ss_pred             -----hcCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCC
Confidence                 36999999998642          1246789999999999999874    3444689999997544321    0 


Q ss_pred             ----------------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCC-
Q 041276          145 ----------------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTP-  205 (251)
Q Consensus       145 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~-  205 (251)
                                      ....|+.||.+.+.+++.++.+   +|+++..+.|+.+..|........  ...........+ 
T Consensus       141 ~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~  217 (342)
T PLN02214        141 AVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT  217 (342)
T ss_pred             cccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc
Confidence                            1236999999999999888776   489999999999988864432111  111111111111 


Q ss_pred             ----CCCCCCHHHHHHHHHHHcCC
Q 041276          206 ----MERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       206 ----~~~~~~~~dva~~~~~l~~~  225 (251)
                          ...+..++|+|++++.++..
T Consensus       218 ~~~~~~~~i~V~Dva~a~~~al~~  241 (342)
T PLN02214        218 YANLTQAYVDVRDVALAHVLVYEA  241 (342)
T ss_pred             CCCCCcCeeEHHHHHHHHHHHHhC
Confidence                11356799999999888853

>PLN02583 cinnamoyl-CoA reductase

Probab=99.66  E-value=1.4e-14  Score=120.90  Aligned_cols=198  Identities=11%  Similarity=0.001  Sum_probs=127.8

Q ss_pred             CCCEEEEecCCCCcCc---------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGN---------------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG~---------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+|+||||||+|+||.                     ..........+...+.++.++.+|++|.+++.+++        
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l--------   76 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL--------   76 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH--------
Confidence            4689999999999990                     00111111222111235677889999998887665        


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-C---------
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-N---------  144 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~---------  144 (251)
                      ..+|.++|.++...      +.. ..++..+++|+.+++++++++.+.+   +.++||++||.++.... +         
T Consensus        77 ~~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~  146 (297)
T PLN02583         77 KGCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVD  146 (297)
T ss_pred             cCCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCC
Confidence            46899998765332      111 2367899999999999999986653   23699999998764311 0         


Q ss_pred             --CC----------hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC--CCCCC
Q 041276          145 --LG----------TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP--MERPG  210 (251)
Q Consensus       145 --~~----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~  210 (251)
                        .+          ..|+.||...+.++..++++   .|++++.|+|+.+.+|......  . .........+  ...+.
T Consensus       147 E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~--~-~~~~~~~~~~~~~~~~v  220 (297)
T PLN02583        147 ERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN--P-YLKGAAQMYENGVLVTV  220 (297)
T ss_pred             cccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch--h-hhcCCcccCcccCcceE
Confidence              01          15999999999888877655   4899999999999998653211  0 1110000111  11357


Q ss_pred             CHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          211 EPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                      .++|+|++++..+...  ...| .+.+-++
T Consensus       221 ~V~Dva~a~~~al~~~--~~~~-r~~~~~~  247 (297)
T PLN02583        221 DVNFLVDAHIRAFEDV--SSYG-RYLCFNH  247 (297)
T ss_pred             EHHHHHHHHHHHhcCc--ccCC-cEEEecC
Confidence            8999999998888532  2234 4444444

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.66  E-value=1.7e-14  Score=121.68  Aligned_cols=185  Identities=12%  Similarity=0.144  Sum_probs=123.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------------eeEEEeccCCCHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------------KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------------~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ++|+||||||+|.||     ..+++.+.+.|.                          ++.++..|+++++.+.+++   
T Consensus         3 ~~~~ilVtGatGfIG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---   74 (322)
T PLN02662          3 EGKVVCVTGASGYIA-----SWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV---   74 (322)
T ss_pred             CCCEEEEECChHHHH-----HHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH---
Confidence            468999999999999     555555544433                          3455667777777666665   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-c-CC----
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-L-ST----  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~-~~----  143 (251)
                           .++|+|||+|+... ..   ...+  ....+++|+.++.++++++....   +..+||++||.++. . +.    
T Consensus        75 -----~~~d~Vih~A~~~~-~~---~~~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~  140 (322)
T PLN02662         75 -----DGCEGVFHTASPFY-HD---VTDP--QAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTP  140 (322)
T ss_pred             -----cCCCEEEEeCCccc-CC---CCCh--HHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCC
Confidence                 46899999998643 11   1111  25788999999999999874321   34689999997632 1 11    


Q ss_pred             -----------CC-----ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhC---
Q 041276          144 -----------NL-----GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCR---  203 (251)
Q Consensus       144 -----------~~-----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~---  203 (251)
                                 +.     ...|+.+|.+.+.+++.+..+   +++++..+.|+.+.+|....... ...........   
T Consensus       141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  217 (322)
T PLN02662        141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT  217 (322)
T ss_pred             CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc
Confidence                       00     136999999999988877655   58999999999999987543211 11222222111   


Q ss_pred             CC--CCCCCCHHHHHHHHHHHcCC
Q 041276          204 TP--MERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       204 ~~--~~~~~~~~dva~~~~~l~~~  225 (251)
                      .+  ...+..++|+|++++.++..
T Consensus       218 ~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        218 FPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             CCCCCcCeEEHHHHHHHHHHHhcC
Confidence            11  12457899999999988864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.65  E-value=3.7e-14  Score=121.06  Aligned_cols=209  Identities=14%  Similarity=0.128  Sum_probs=134.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC----------------------------CeeEEEeccCCCHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC----------------------------FKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~----------------------------~~~~~~~~D~~~~~~~~~~   65 (251)
                      .+++|+||||||+|+||     ..+++.|.+.+                            .++.++.+|+++++++.++
T Consensus         2 ~~~~~~vlItGatG~iG-----~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~   76 (352)
T PLN02240          2 SLMGRTILVTGGAGYIG-----SHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV   76 (352)
T ss_pred             CCCCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH
Confidence            56789999999999999     44444433332                            2356778899999999888


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---  142 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---  142 (251)
                      ++.      .++|.|||+|+... ..    .+.+.+.+.+++|+.++..+++++    ++.+.+++|++||...+..   
T Consensus        77 ~~~------~~~d~vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~  141 (352)
T PLN02240         77 FAS------TRFDAVIHFAGLKA-VG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEE  141 (352)
T ss_pred             HHh------CCCCEEEEccccCC-cc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCC
Confidence            764      37999999999753 11    123456788999999999988765    5555578999999643321   


Q ss_pred             --------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC-----C---CCCCC-HHHHHHHh-hCC
Q 041276          143 --------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT-----E---PYLSD-EKFLEEVK-CRT  204 (251)
Q Consensus       143 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~-----~---~~~~~-~~~~~~~~-~~~  204 (251)
                              ..+...|+.||.+.+.+++.++.+  ..++.+..+.++.+..+-.     .   ..... ..+..... .+.
T Consensus       142 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  219 (352)
T PLN02240        142 VPCTEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRR  219 (352)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCC
Confidence                    123568999999999999988765  2356666666644433211     0   00000 01122221 111


Q ss_pred             C------------C----CCCCCHHHHHHHHHHHcCCC--CCCccccEEEeCCCcccc
Q 041276          205 P------------M----ERPGEPKEVSSLVAFLCMPA--ASYITGQTICVDGGFTVN  244 (251)
Q Consensus       205 ~------------~----~~~~~~~dva~~~~~l~~~~--~~~~~G~~i~vdgG~~~~  244 (251)
                      +            .    ..+..++|+|++++.++...  .....|+.+++.+|..++
T Consensus       220 ~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s  277 (352)
T PLN02240        220 PELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS  277 (352)
T ss_pred             CceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence            1            1    12356899999988776421  122456888888877643

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.65  E-value=4.8e-14  Score=120.27  Aligned_cols=206  Identities=12%  Similarity=0.018  Sum_probs=139.3

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------------------eeEEEeccCCCHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-----------------------------KVTGSVCDASSRAERE   63 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~D~~~~~~~~   63 (251)
                      ..+++|+||||||+|-||     ..+++.|.+.+.                             ++.++.+|+.|.+.+.
T Consensus        11 ~~~~~~~vlVtGatGfiG-----~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~   85 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIG-----SGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQ   85 (348)
T ss_pred             ccccCCEEEEECCccHHH-----HHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHH
Confidence            456789999999999999     555555554332                             3456778999988877


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      +++        ..+|+|||.|+.......     .++....+++|+.++.++++++    ++.+..++|++||...+...
T Consensus        86 ~~~--------~~~d~ViHlAa~~~~~~~-----~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~  148 (348)
T PRK15181         86 KAC--------KNVDYVLHQAALGSVPRS-----LKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDH  148 (348)
T ss_pred             HHh--------hCCCEEEECccccCchhh-----hhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCC
Confidence            776        359999999996542111     1223457899999999999887    45555689999987544211


Q ss_pred             -----------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCCC--
Q 041276          144 -----------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPM--  206 (251)
Q Consensus       144 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~--  206 (251)
                                 .+...|+.||.+.+.+++.++.+   +++++..+.|+.+..|-..+..    .-+.+........+.  
T Consensus       149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~  225 (348)
T PRK15181        149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYI  225 (348)
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEE
Confidence                       12357999999999999887665   5899999999999887543210    113333333322221  


Q ss_pred             -------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          207 -------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       207 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                             ..+...+|+|++++.++........|+.+++.+|...
T Consensus       226 ~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        226 NGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             eCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence                   1234589999998876643222235788999877554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.62  E-value=1.4e-13  Score=117.20  Aligned_cols=202  Identities=13%  Similarity=0.019  Sum_probs=124.4

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcC------------------------------CeeEEEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKC------------------------------FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~------------------------------~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      |+||||||+|+||     ..+++.|.+.|                              ..+.++.+|++|.+++.++++
T Consensus         1 ~~vlVTGatGfIG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALITGITGQDG-----SYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEEcCCCcHH-----HHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence            6899999999999     44444444332                              235677899999999988887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc------
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL------  141 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~------  141 (251)
                      .+      ++|+|||+|+......     ..+.-...+++|+.++.++++++.+.-.+ +..++|++||...+.      
T Consensus        76 ~~------~~d~ViH~Aa~~~~~~-----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~  143 (343)
T TIGR01472        76 EI------KPTEIYNLAAQSHVKV-----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIP  143 (343)
T ss_pred             hC------CCCEEEECCcccccch-----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCC
Confidence            52      6999999999754211     11223567788999999999998653211 113799999864432      


Q ss_pred             -----CCCCChhhHHhHHHHHHHHHHHHHHHccC---CeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC----------
Q 041276          142 -----STNLGTIYAATKGAMNQLAKNLACEWARD---NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR----------  203 (251)
Q Consensus       142 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~----------  203 (251)
                           +..+...|+.||.+.+.+++.+++++.-.   ++.++...|+.-.. +...  ............          
T Consensus       144 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~g  220 (343)
T TIGR01472       144 QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTR--KITRAAAKIKLGLQEKLYLGNL  220 (343)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccch--HHHHHHHHHHcCCCCceeeCCC
Confidence                 11245689999999999999998875311   12223333432110 0000  001112222111          


Q ss_pred             CCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          204 TPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       204 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .....+...+|+|++++.++....    +..++|.+|..+
T Consensus       221 ~~~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~  256 (343)
T TIGR01472       221 DAKRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGETH  256 (343)
T ss_pred             ccccCceeHHHHHHHHHHHHhcCC----CccEEecCCCce
Confidence            112245679999999988775321    246778777554

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.62  E-value=7.9e-14  Score=114.68  Aligned_cols=205  Identities=15%  Similarity=0.144  Sum_probs=142.9

Q ss_pred             CCCEEEEecCCCCcC-------------------c--HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLG-------------------N--EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG-------------------~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .+++|+||||||-||                   +  .++..+.+.+++....+...+..|++|++++++.+        
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--------   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--------   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH--------
Confidence            789999999999999                   1  12233456666666667889999999999999999        


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-CC--------
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-NL--------  145 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~--------  145 (251)
                      .++|+|+|.|.... ..   ..+  .-.+.++..+.|+.++++++...-   .-.|||++||.++.... +.        
T Consensus        77 ~gcdgVfH~Asp~~-~~---~~~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   77 DGCDGVFHTASPVD-FD---LED--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             hCCCEEEEeCccCC-CC---CCC--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCcccc
Confidence            46999999999765 21   111  223688999999999999984322   24689999999988754 11        


Q ss_pred             ---C----------hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCCC---
Q 041276          146 ---G----------TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPME---  207 (251)
Q Consensus       146 ---~----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~---  207 (251)
                         |          ..|+.||.--+.-+..++.|   .++....|+|+.|-.|...+....  ...++.+....+..   
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~  224 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF  224 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence               1          24888884444444444443   469999999999999988773322  22333333322211   


Q ss_pred             --CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcc
Q 041276          208 --RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       208 --~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                        .+...+|+|.+.+.+.-...  ..|+.|.+.....
T Consensus       225 ~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  225 WLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             ceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence              23678999999999995443  4599888877655

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.61  E-value=1.2e-13  Score=119.88  Aligned_cols=210  Identities=22%  Similarity=0.178  Sum_probs=158.5

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ..+.||+||||||+|.||                    ++.++....+++...  ..+..++-+|+.|.+.++.+++.  
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~--  323 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG--  323 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--
Confidence            346899999999999999                    455566666666654  35788899999999999999875  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                          -++|+++|.|+.-+ . |.-+   .+..+.+..|+.|+.++++++    .+.+-.++|.+|+--+..|.   ..|+
T Consensus       324 ----~kvd~VfHAAA~KH-V-Pl~E---~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~Pt---NvmG  387 (588)
T COG1086         324 ----HKVDIVFHAAALKH-V-PLVE---YNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNPT---NVMG  387 (588)
T ss_pred             ----CCCceEEEhhhhcc-C-cchh---cCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCCc---hHhh
Confidence                38999999999875 2 2223   345778999999999999998    44455689999998776655   5699


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC--------CCCCHHHHHHHHHHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME--------RPGEPKEVSSLVAFL  222 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~dva~~~~~l  222 (251)
                      ++|...+.++.+++......+-++..+.-|.|.....+-   -+-+.+++.+..|.-        .+.+-+|.++.++.-
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV---iPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA  464 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV---IPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQA  464 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC---HHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHH
Confidence            999999999999988766557889999999887654432   255566666554432        234677888877766


Q ss_pred             cCCCCCCccccEEEeCCCcccccc
Q 041276          223 CMPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      ...   .-.|+++.+|-|-.++-.
T Consensus       465 ~a~---~~gGeifvldMGepvkI~  485 (588)
T COG1086         465 GAI---AKGGEIFVLDMGEPVKII  485 (588)
T ss_pred             Hhh---cCCCcEEEEcCCCCeEHH
Confidence            643   346999999998776543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.61  E-value=1.6e-13  Score=116.55  Aligned_cols=205  Identities=14%  Similarity=0.098  Sum_probs=129.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++||||||+|+||     ..+++.+.+.+.                         ++.++.+|++|++++.++++.    
T Consensus         1 m~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   71 (338)
T PRK10675          1 MRVLVTGGSGYIG-----SHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD----   71 (338)
T ss_pred             CeEEEECCCChHH-----HHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc----
Confidence            3699999999999     445554443332                         244567899999888887753    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC---------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST---------  143 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~---------  143 (251)
                        .++|+|||+|+... ...    ..+.....+++|+.++..+++++    ++.+.+++|++||...+...         
T Consensus        72 --~~~d~vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~  140 (338)
T PRK10675         72 --HAIDTVIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESF  140 (338)
T ss_pred             --CCCCEEEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCcccccc
Confidence              47999999998754 211    12234567889999999888764    55566789999997543211         


Q ss_pred             ---CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-------CC--HHHHHHHhh-CC------
Q 041276          144 ---NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-------SD--EKFLEEVKC-RT------  204 (251)
Q Consensus       144 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-------~~--~~~~~~~~~-~~------  204 (251)
                         .....|+.+|.+.+.+++.++++.  .++++..+.++.+..+......       ..  -........ ..      
T Consensus       141 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (338)
T PRK10675        141 PTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF  218 (338)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEe
Confidence               235789999999999999987663  2466666665544443211000       00  011111111 11      


Q ss_pred             ----C--C----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          205 ----P--M----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       205 ----~--~----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                          |  .    ..+..++|+|++++.++........|+.+.+.+|..++
T Consensus       219 ~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s  268 (338)
T PRK10675        219 GNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS  268 (338)
T ss_pred             CCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence                1  1    13567999999988877532222346888888776543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.59  E-value=3.8e-13  Score=113.49  Aligned_cols=191  Identities=18%  Similarity=0.130  Sum_probs=130.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++++||||+|+||     ..+++.+.+.+.                  .+.++.+|+++.+++.+++        .++|+
T Consensus         1 ~~vlItG~~G~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~--------~~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVG-----SAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAV--------AGCRA   67 (328)
T ss_pred             CeEEEECCccchh-----HHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHH--------hCCCE
Confidence            4799999999999     777777765542                  2446678999998887776        46899


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC---------------
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN---------------  144 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~---------------  144 (251)
                      +||+++... .   .   .+.....+++|+.++..+++++.    +.+.+++|++||...+...+               
T Consensus        68 vi~~a~~~~-~---~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        68 LFHVAADYR-L---W---APDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEEeceecc-c---C---CCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            999998542 1   1   12346678899999998888863    44457999999976654211               


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHH-HHHhhCCCC-----CCCCCHHHHHHH
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFL-EEVKCRTPM-----ERPGEPKEVSSL  218 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~dva~~  218 (251)
                      ....|+.+|.+.+.+++.++.+   +++++..+.|+.+..+............ .......|.     ..+..++|+|++
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  213 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEG  213 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHH
Confidence            1347999999999999888765   5789999999988776533221111121 111112221     134579999999


Q ss_pred             HHHHcCCCCCCccccEEEeC
Q 041276          219 VAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vd  238 (251)
                      ++.++...   ..|+.+.+.
T Consensus       214 ~~~~~~~~---~~~~~~~~~  230 (328)
T TIGR03466       214 HLLALERG---RIGERYILG  230 (328)
T ss_pred             HHHHHhCC---CCCceEEec
Confidence            88887542   357777774

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.58  E-value=4.1e-13  Score=114.80  Aligned_cols=153  Identities=18%  Similarity=0.111  Sum_probs=102.2

Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------  143 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  143 (251)
                      .++|+|||+|+.....        ..++..+++|+.++..+++.+.    +.+..+++++||.......           
T Consensus        87 ~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~----~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~  154 (367)
T TIGR01746        87 ENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAA----SGRAKPLHYVSTISVLAAIDLSTVTEDDAI  154 (367)
T ss_pred             hhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHh----hCCCceEEEEccccccCCcCCCCccccccc
Confidence            4799999999965411        1245677899999998888763    3444569999998765431           


Q ss_pred             -----CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHH-h-----hCCCC-----C
Q 041276          144 -----NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEV-K-----CRTPM-----E  207 (251)
Q Consensus       144 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~-~-----~~~~~-----~  207 (251)
                           .....|+.+|.+.+.+++.++.    .|++++.+.||.+.++.........+..... .     ...|.     .
T Consensus       155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  230 (367)
T TIGR01746       155 VTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTE  230 (367)
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCcccc
Confidence                 1124699999999998876543    3899999999999886332222222222111 1     11222     1


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          208 RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .+..++|+|++++.++.......+|+.+.+.++..+
T Consensus       231 ~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       231 DLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             CcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence            256789999999999865544345888999886543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.57  E-value=5.4e-13  Score=112.39  Aligned_cols=204  Identities=14%  Similarity=0.090  Sum_probs=135.0

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------------eeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCF-----------------------KVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +||||||+|+||     ..+++.+.+.+.                       .+..+.+|+++++++.++++.      .
T Consensus         1 kvlV~GatG~iG-----~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~   69 (328)
T TIGR01179         1 KILVTGGAGYIG-----SHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE------H   69 (328)
T ss_pred             CEEEeCCCCHHH-----HHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh------C
Confidence            479999999999     555555554332                       234667899999999888763      5


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------C
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------N  144 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~  144 (251)
                      ++|++||+||... ...    ..++..+.++.|+.++..+++++    .+.+..++|++||...+...           .
T Consensus        70 ~~d~vv~~ag~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~  140 (328)
T TIGR01179        70 KIDAVIHFAGLIA-VGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLG  140 (328)
T ss_pred             CCcEEEECccccC-cch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCC
Confidence            7999999999754 211    22334567889999999988875    44455789999886543211           1


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-----CCHHHHH----HHhhC----------CC
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-----SDEKFLE----EVKCR----------TP  205 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-----~~~~~~~----~~~~~----------~~  205 (251)
                      ....|+.+|++.+.+++.++++  ..++++..+.|+.+..+......     ....+..    .....          .|
T Consensus       141 ~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (328)
T TIGR01179       141 PINPYGRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYP  218 (328)
T ss_pred             CCCchHHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCccc
Confidence            2357999999999999998765  24788899999887776432211     1111111    11101          01


Q ss_pred             C------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 M------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 ~------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .      ..+...+|++++++.++........|+.+.+.+|..++
T Consensus       219 ~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s  263 (328)
T TIGR01179       219 TPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS  263 (328)
T ss_pred             CCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence            1      12456899999998888543222357788887776543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.57  E-value=5e-13  Score=114.76  Aligned_cols=187  Identities=10%  Similarity=0.027  Sum_probs=122.8

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------------CeeEEEeccCCCHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------------FKVTGSVCDASSRAER   62 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~D~~~~~~~   62 (251)
                      .....+|+||||||+|+||     ..+++.+.+.|                             ..+.++.+|++|.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG-----~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l  122 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLG-----LAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESL  122 (367)
T ss_pred             ccCCCCCEEEEECCchHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHH
Confidence            4457899999999999999     22222222221                             1356778899999998


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccc-c
Q 041276           63 EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCG-V  140 (251)
Q Consensus        63 ~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~-~  140 (251)
                      .++++        ++|.++|+++...+.. ...    ......++|+.++..+++++    ++. +..++|++||.++ .
T Consensus       123 ~~~i~--------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~----~~~~~v~r~V~~SS~~~~v  185 (367)
T PLN02686        123 HEAFD--------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEAC----VRTESVRKCVFTSSLLACV  185 (367)
T ss_pred             HHHHH--------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHH----HhcCCccEEEEeccHHHhc
Confidence            88874        4889999998754222 101    11234567888888888886    332 3468999999641 1


Q ss_pred             c--------C--------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH
Q 041276          141 L--------S--------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE  198 (251)
Q Consensus       141 ~--------~--------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~  198 (251)
                      .        +              ..+...|+.||.+.+.+++.++.+   +|++++.++|+.+.+|........ ....
T Consensus       186 yg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~-~~~~  261 (367)
T PLN02686        186 WRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNST-ATIA  261 (367)
T ss_pred             ccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCCh-hHHH
Confidence            1        0              001236999999999999888775   589999999999999964321111 1111


Q ss_pred             HHhhCCC---CC--CCCCHHHHHHHHHHHcC
Q 041276          199 EVKCRTP---ME--RPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       199 ~~~~~~~---~~--~~~~~~dva~~~~~l~~  224 (251)
                      ......+   .+  .+..++|++++++.++.
T Consensus       262 ~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        262 YLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            1111111   11  25679999999988875

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.56  E-value=6.7e-13  Score=108.13  Aligned_cols=196  Identities=15%  Similarity=0.066  Sum_probs=117.7

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------CeeEEEeccCCCH-HHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------FKVTGSVCDASSR-AEREKLMKQV   69 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------~~~~~~~~D~~~~-~~~~~~~~~i   69 (251)
                      +....++|++|||||+|+||     ..+++.+...+                    ..+.++.+|+++. +.+.+.+   
T Consensus        11 ~~~~~~~~~ilItGasG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~---   82 (251)
T PLN00141         11 DAENVKTKTVFVAGATGRTG-----KRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI---   82 (251)
T ss_pred             ccccccCCeEEEECCCcHHH-----HHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh---
Confidence            34456789999999999999     44444443322                    2366677888873 3222222   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc---CCCCC
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL---STNLG  146 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~---~~~~~  146 (251)
                          ..++|+||+++|......+.         ..+++|+.+...+++++    ++.+.++||++||...+.   +.+..
T Consensus        83 ----~~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~  145 (251)
T PLN00141         83 ----GDDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILN  145 (251)
T ss_pred             ----hcCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccC
Confidence                02699999999864311111         11467888888887775    555668999999986432   22223


Q ss_pred             hhhHHhHHHHHHHH-HHHHHH-HccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          147 TIYAATKGAMNQLA-KNLACE-WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~-~~la~e-~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ..|...|.+...+. +..+.+ +...|++++.|.||++.++........      .....+...+.+++|+|+.+..++.
T Consensus       146 ~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~dvA~~~~~~~~  219 (251)
T PLN00141        146 PAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRDQVAEVAVEALL  219 (251)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHHHHHHHHHHHhc
Confidence            45666665444333 322222 456799999999999987643211000      0000112235689999999999986


Q ss_pred             CCCCCccccEEEeCC
Q 041276          225 PAASYITGQTICVDG  239 (251)
Q Consensus       225 ~~~~~~~G~~i~vdg  239 (251)
                      ...  ..+..+.+-+
T Consensus       220 ~~~--~~~~~~~~~~  232 (251)
T PLN00141        220 CPE--SSYKVVEIVA  232 (251)
T ss_pred             Chh--hcCcEEEEec
Confidence            433  2345555554

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.56  E-value=2.1e-13  Score=109.39  Aligned_cols=203  Identities=15%  Similarity=0.106  Sum_probs=143.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHH--------------------------hcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWK--------------------------TKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~--------------------------~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++|||||.|.||     ..+.+.+.                          ....+..|++.|+.|.+.+.+++++   
T Consensus         1 ~~iLVTGGaGFIG-----snfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~---   72 (340)
T COG1088           1 MKILVTGGAGFIG-----SNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKE---   72 (340)
T ss_pred             CcEEEecCcchHH-----HHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHh---
Confidence            5789999999999     22222211                          1124788999999999999998875   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-----------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-----------  140 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-----------  140 (251)
                         -++|+++|-|+-.+.     +.+...-...++.|+.|++.+++++..+..+   -+++.||.-.-+           
T Consensus        73 ---~~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~Ft  141 (340)
T COG1088          73 ---YQPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFT  141 (340)
T ss_pred             ---cCCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcc
Confidence               489999999986652     3344555677899999999999998555432   278888863211           


Q ss_pred             --cCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCC---------
Q 041276          141 --LSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP---------  209 (251)
Q Consensus       141 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------  209 (251)
                        .+..+.+.|++||||-..|++++.+.   +|+.+....+..-..|..-+-.-.+..........|.+-.         
T Consensus       142 E~tp~~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDW  218 (340)
T COG1088         142 ETTPYNPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDW  218 (340)
T ss_pred             cCCCCCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeee
Confidence              23456789999999999999999987   6888888888666666553332234444444444444333         


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      .-++|=+.++...+.. ..  -|++.+|.||.-.+-
T Consensus       219 l~VeDh~~ai~~Vl~k-g~--~GE~YNIgg~~E~~N  251 (340)
T COG1088         219 LYVEDHCRAIDLVLTK-GK--IGETYNIGGGNERTN  251 (340)
T ss_pred             EEeHhHHHHHHHHHhc-Cc--CCceEEeCCCccchH
Confidence            3478999988777743 32  399999999976543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.56  E-value=4.1e-13  Score=110.91  Aligned_cols=199  Identities=16%  Similarity=0.172  Sum_probs=140.5

Q ss_pred             EEecCCCCcCcHHHHHHHHHHHHhcC--Cee---------------------EEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           21 LVTGGTKGLGNEAELNECLREWKTKC--FKV---------------------TGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        21 lItGas~giG~~~~~~~~~~~~~~~~--~~~---------------------~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |||||+|-||     ..++++|.+.+  .++                     .++.+|++|++++.+++        .+.
T Consensus         1 LVTGgsGflG-----~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~--------~g~   67 (280)
T PF01073_consen    1 LVTGGSGFLG-----SHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEAL--------EGV   67 (280)
T ss_pred             CEEcCCcHHH-----HHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHh--------cCC
Confidence            6999999999     77777777665  111                     26789999999999988        469


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---C-----------
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---T-----------  143 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---~-----------  143 (251)
                      |+|||+|+......      ....+..+++|+.|+.++++++    ++.+-.++|++||.+...+   .           
T Consensus        68 d~V~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~  137 (280)
T PF01073_consen   68 DVVFHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP  137 (280)
T ss_pred             ceEEEeCccccccC------cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc
Confidence            99999999765222      3446789999999999999988    4456679999999887665   1           


Q ss_pred             ---CCChhhHHhHHHHHHHHHHHHH-HHc-cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC---CCC------CCC
Q 041276          144 ---NLGTIYAATKGAMNQLAKNLAC-EWA-RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR---TPM------ERP  209 (251)
Q Consensus       144 ---~~~~~Y~~sK~a~~~~~~~la~-e~~-~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~  209 (251)
                         .....|+.||+..+.++..... ++. ...++..+|+|..|-.|......+.  ..+.....   ...      ..+
T Consensus       138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~--~~~~~~~g~~~~~~g~~~~~~~~  215 (280)
T PF01073_consen  138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR--LVKMVRSGLFLFQIGDGNNLFDF  215 (280)
T ss_pred             ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch--hhHHHHhcccceeecCCCceECc
Confidence               1234799999999988876554 111 1248888899999988865443222  11111111   111      124


Q ss_pred             CCHHHHHHHHHHHcC---CC--CCCccccEEEeCCCcccc
Q 041276          210 GEPKEVSSLVAFLCM---PA--ASYITGQTICVDGGFTVN  244 (251)
Q Consensus       210 ~~~~dva~~~~~l~~---~~--~~~~~G~~i~vdgG~~~~  244 (251)
                      ..++++|++++....   +.  .....||.+.+..|..+.
T Consensus       216 vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  216 VYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             EeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            568999998865432   22  456899999999988776

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.54  E-value=1.5e-12  Score=112.65  Aligned_cols=202  Identities=14%  Similarity=0.112  Sum_probs=131.1

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-C-------------------------eeEEEeccCCCHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-F-------------------------KVTGSVCDASSRAEREKL   65 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~-------------------------~~~~~~~D~~~~~~~~~~   65 (251)
                      ...++.|+||||||+|.||     ..+++.|.+.+ .                         ++.++.+|++|.+.+.++
T Consensus         9 ~~~~~~~~VlVTGgtGfIG-----s~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   83 (386)
T PLN02427          9 GKPIKPLTICMIGAGGFIG-----SHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL   83 (386)
T ss_pred             CCcccCcEEEEECCcchHH-----HHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHH
Confidence            3455668899999999999     55666555432 2                         345667788888877766


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--  143 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--  143 (251)
                      +        ..+|+|||+|+...+.. .. .++   .+.+..|+.++..+++++    ++.+ .++|++||...+...  
T Consensus        84 ~--------~~~d~ViHlAa~~~~~~-~~-~~~---~~~~~~n~~gt~~ll~aa----~~~~-~r~v~~SS~~vYg~~~~  145 (386)
T PLN02427         84 I--------KMADLTINLAAICTPAD-YN-TRP---LDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIG  145 (386)
T ss_pred             h--------hcCCEEEEcccccChhh-hh-hCh---HHHHHHHHHHHHHHHHHH----HhcC-CEEEEEeeeeeeCCCcC
Confidence            6        35899999999754211 11 112   234567999999888876    3333 689999996533210  


Q ss_pred             -------C------------------------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-
Q 041276          144 -------N------------------------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-  191 (251)
Q Consensus       144 -------~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-  191 (251)
                             +                        ....|+.||.+.+.+++.++..   +++++..+.|+.+..|...... 
T Consensus       146 ~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~  222 (386)
T PLN02427        146 SFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPG  222 (386)
T ss_pred             CCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccc
Confidence                   0                        1136999999999999876544   5899999999999887532110 


Q ss_pred             ------CCHH----HHHHHhhCCCC---------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          192 ------SDEK----FLEEVKCRTPM---------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       192 ------~~~~----~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                            ....    +........|.         ..+...+|+|++++.++... ....|+.+++.+|
T Consensus       223 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        223 IDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             ccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence                  0011    12222222221         13567999999998887532 1235788888765

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.52  E-value=4.2e-14  Score=115.22  Aligned_cols=204  Identities=20%  Similarity=0.188  Sum_probs=136.8

Q ss_pred             EEEecCCCCcC--------------------cHHHHHHHHHHHHhcC--Cee----EEEeccCCCHHHHHHHHHHHHHhc
Q 041276           20 ALVTGGTKGLG--------------------NEAELNECLREWKTKC--FKV----TGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        20 vlItGas~giG--------------------~~~~~~~~~~~~~~~~--~~~----~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ||||||+|.||                    ++.++..+.+++....  .++    .++.+|+.|.+.++.++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            79999999999                    5566667777775321  123    3458899999999999965     


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       -++|+|+|.|+.-+ . ++-+.   ...+.++.|+.|+.++++++..    .+-.++|++|+--+..|   ...|++||
T Consensus        76 -~~pdiVfHaAA~Kh-V-pl~E~---~p~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTDKAv~P---tnvmGatK  142 (293)
T PF02719_consen   76 -YKPDIVFHAAALKH-V-PLMED---NPFEAVKTNVLGTQNVAEAAIE----HGVERFVFISTDKAVNP---TNVMGATK  142 (293)
T ss_dssp             --T-SEEEE-------H-HHHCC---CHHHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -cCCCEEEEChhcCC-C-ChHHh---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEccccccCCC---CcHHHHHH
Confidence             48999999999865 2 22333   3477899999999999999844    45568999999877664   46799999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHcCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM--------ERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~  225 (251)
                      ...+.++.+++......+.++.+|.-|.|...-.+-   -+-+.+++....|.        ..+.+++|.++.++.-+..
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV---ip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~  219 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV---IPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAAL  219 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC---HHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH---HHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhh
Confidence            999999999988876677899999999886543322   26677777776554        2246899999988776642


Q ss_pred             CCCCccccEEEeCCCccccccc
Q 041276          226 AASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      .   ..|+.+..|-|..++-.+
T Consensus       220 ~---~~geifvl~mg~~v~I~d  238 (293)
T PF02719_consen  220 A---KGGEIFVLDMGEPVKILD  238 (293)
T ss_dssp             -----TTEEEEE---TCEECCC
T ss_pred             C---CCCcEEEecCCCCcCHHH
Confidence            2   358999999988776544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.51  E-value=2.2e-12  Score=119.05  Aligned_cols=203  Identities=12%  Similarity=0.014  Sum_probs=134.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhc--C------------------------CeeEEEeccCCCHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTK--C------------------------FKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~--~------------------------~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      .++|+||||||+|.||     ..+++.|.+.  +                        .++.++.+|++|.+.+..++..
T Consensus         4 ~~~~~VLVTGatGfIG-----~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   78 (668)
T PLN02260          4 YEPKNILITGAAGFIA-----SHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT   78 (668)
T ss_pred             CCCCEEEEECCCcHHH-----HHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh
Confidence            4568999999999999     5555555443  1                        1355667899998877665532


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccC-----
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLS-----  142 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~-----  142 (251)
                            .++|+|||+|+......     ...+....+++|+.++..+++++    ++.+ ..++|++||...+..     
T Consensus        79 ------~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~  143 (668)
T PLN02260         79 ------EGIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDA  143 (668)
T ss_pred             ------cCCCEEEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCcccc
Confidence                  47999999999764211     11223467789999999988876    4433 468999999654321     


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-------
Q 041276          143 ---------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-------  206 (251)
Q Consensus       143 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------  206 (251)
                               ..+...|+.+|.+.+.+++.+..+   .++++..+.|+.+..|-.....-.+.+........+.       
T Consensus       144 ~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~  220 (668)
T PLN02260        144 DVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGS  220 (668)
T ss_pred             ccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCC
Confidence                     112457999999999999987765   4788889999988877542211112222222221111       


Q ss_pred             --CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          207 --ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       207 --~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                        ..+...+|+|+++..++...   ..|+.+++.++..+
T Consensus       221 ~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        221 NVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             ceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence              12456999999998887432   24678888776544

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.51  E-value=2.7e-12  Score=107.33  Aligned_cols=200  Identities=15%  Similarity=0.109  Sum_probs=133.6

Q ss_pred             EEecCCCCcCcHHHHHHHHHHHHhcCCeeEE----EeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCC
Q 041276           21 LVTGGTKGLGNEAELNECLREWKTKCFKVTG----SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEY   96 (251)
Q Consensus        21 lItGas~giG~~~~~~~~~~~~~~~~~~~~~----~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~   96 (251)
                      |||||+|.||     ..+++.|.+.+..+..    ..+|+++.++++++++.      .++|+|||+|+........   
T Consensus         1 lItGa~GfiG-----~~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~------~~~d~Vih~A~~~~~~~~~---   66 (306)
T PLN02725          1 FVAGHRGLVG-----SAIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAK------EKPTYVILAAAKVGGIHAN---   66 (306)
T ss_pred             CcccCCCccc-----HHHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhc------cCCCEEEEeeeeecccchh---
Confidence            6999999999     8899999887765443    36899999988888765      3689999999964311101   


Q ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-------------C--C-ChhhHHhHHHHHHHH
Q 041276           97 MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-------------N--L-GTIYAATKGAMNQLA  160 (251)
Q Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-------------~--~-~~~Y~~sK~a~~~~~  160 (251)
                       .+.....++.|+.++..+++++    ++.+..++|++||...+.+.             +  + ...|+.||.+.+.++
T Consensus        67 -~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~  141 (306)
T PLN02725         67 -MTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC  141 (306)
T ss_pred             -hhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence             1122456888999998888887    44455689999986543211             1  1 224999999999988


Q ss_pred             HHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHH----hhCC----------CCCCCCCHHHHHHHHHHH
Q 041276          161 KNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEV----KCRT----------PMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       161 ~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~----~~~~----------~~~~~~~~~dva~~~~~l  222 (251)
                      +.+.++   .++++..+.|+.+..+......    ..+.....+    ....          +...+..++|++++++.+
T Consensus       142 ~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~  218 (306)
T PLN02725        142 QAYRIQ---YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFL  218 (306)
T ss_pred             HHHHHH---hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHH
Confidence            887665   4788999999988887532100    012222211    1111          112457799999999998


Q ss_pred             cCCCCCCccccEEEeCCCccccc
Q 041276          223 CMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      +....   .+..+++.+|..++-
T Consensus       219 ~~~~~---~~~~~ni~~~~~~s~  238 (306)
T PLN02725        219 MRRYS---GAEHVNVGSGDEVTI  238 (306)
T ss_pred             Hhccc---cCcceEeCCCCcccH
Confidence            86422   234567877765543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.51  E-value=8.9e-13  Score=106.01  Aligned_cols=193  Identities=18%  Similarity=0.220  Sum_probs=138.7

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCFK-------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      ||||||+|-||     ..+++.+.+.+..                   +.++.+|+.+.+.++++++..      ++|.|
T Consensus         1 IlI~GatG~iG-----~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~------~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIG-----SALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA------NIDVV   69 (236)
T ss_dssp             EEEETTTSHHH-----HHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred             EEEEccCCHHH-----HHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc------CceEE
Confidence            79999999999     7888888776543                   456679999999999999863      79999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhh
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIY  149 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y  149 (251)
                      ||+|+...     ...+.+.....++.|+.+...+++.+    ++.+..++|++||...+...           .+...|
T Consensus        70 i~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y  140 (236)
T PF01370_consen   70 IHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPY  140 (236)
T ss_dssp             EEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHH
T ss_pred             EEeecccc-----cccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccc
Confidence            99999753     11122456777888888888877776    55555799999996544332           134579


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCC---CCCCCCCHHHHHHHhhCCCCC---------CCCCHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL---TEPYLSDEKFLEEVKCRTPME---------RPGEPKEVSS  217 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~  217 (251)
                      +.+|...+.+++.+..+.   ++++..+.|+.+-.|.   .....-...+........+..         .+...+|+|+
T Consensus       141 ~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  217 (236)
T PF01370_consen  141 GASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAE  217 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHH
T ss_pred             cccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHH
Confidence            999999999999888763   8999999999998888   111111134444444433211         1245899999


Q ss_pred             HHHHHcCCCCCCccccEEEe
Q 041276          218 LVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~v  237 (251)
                      +++.++....  ..|+.++|
T Consensus       218 ~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  218 AIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHhCCC--CCCCEEEe
Confidence            9999996544  56777665

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.50  E-value=4.9e-12  Score=106.07  Aligned_cols=200  Identities=14%  Similarity=0.177  Sum_probs=128.4

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE--------------eccCCCHHHHHHHHHHHHH--hcCCCccEEEEc
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCFKVTGS--------------VCDASSRAEREKLMKQVSS--LFNGKLNILINN   83 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~--------------~~D~~~~~~~~~~~~~i~~--~~~~~id~lv~~   83 (251)
                      ||||||+|.||     ..+++.|.+.|.++..+              .+|+.|..+.+++++.+..  .+ +++|+|||+
T Consensus         2 ilVtGa~GfiG-----~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d~Vih~   75 (308)
T PRK11150          2 IIVTGGAGFIG-----SNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDF-GDIEAIFHE   75 (308)
T ss_pred             EEEecCCcHHH-----HHHHHHHHhCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhccccc-CCccEEEEC
Confidence            79999999999     88999888877543322              2344444444444444432  23 479999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhHHh
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYAAT  152 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~s  152 (251)
                      |+... ..   ..+.   ...++.|+.++..+++++    ++.+ .++|++||...+..           ..+...|+.+
T Consensus        76 A~~~~-~~---~~~~---~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s  143 (308)
T PRK11150         76 GACSS-TT---EWDG---KYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYS  143 (308)
T ss_pred             ceecC-Cc---CCCh---HHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHH
Confidence            98644 21   1122   346899999999988887    3444 37999999754332           1123579999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--CCC--HHHHHHHhhCC-C---------CCCCCCHHHHHHH
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--LSD--EKFLEEVKCRT-P---------MERPGEPKEVSSL  218 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--~~~--~~~~~~~~~~~-~---------~~~~~~~~dva~~  218 (251)
                      |.+.+.+++.++.+   .++++..+.|+.+..|-....  ...  ..+........ +         ...+...+|+|++
T Consensus       144 K~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a  220 (308)
T PRK11150        144 KFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAV  220 (308)
T ss_pred             HHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHH
Confidence            99999998877655   478888999988887754221  111  11112222211 1         1124578999999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCcccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++.++...    .+..+++.+|..++
T Consensus       221 ~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        221 NLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             HHHHHhcC----CCCeEEcCCCCcee
Confidence            88877532    24588887776443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.48  E-value=7.9e-12  Score=103.65  Aligned_cols=193  Identities=16%  Similarity=0.120  Sum_probs=129.8

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE   95 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~   95 (251)
                      +||||||+|.||     ..+++++.+.|.++..+   ..|+.+.++++++++.      .++|++||+++... ...   
T Consensus         1 kilv~G~tG~iG-----~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~------~~~d~vi~~a~~~~-~~~---   65 (287)
T TIGR01214         1 RILITGANGQLG-----RELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRA------IRPDAVVNTAAYTD-VDG---   65 (287)
T ss_pred             CEEEEcCCCHHH-----HHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHh------CCCCEEEECCcccc-ccc---
Confidence            379999999999     89999998888777654   4699999999888764      36899999999653 111   


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhHHhHHHHHHHHHHHH
Q 041276           96 YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYAATKGAMNQLAKNLA  164 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la  164 (251)
                       .....+..+++|+.++..+++++.    +.+ .++|++||...+.+           ......|+.+|.+.+.+++.+ 
T Consensus        66 -~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-  138 (287)
T TIGR01214        66 -AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-  138 (287)
T ss_pred             -cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-
Confidence             122345678999999999998863    333 48999998654321           112457999999998888755 


Q ss_pred             HHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-------CCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-------ERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       165 ~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                            +.++..+.|+.+..+...... ...+........+.       ..+...+|+|+++..++.... . -++.+++
T Consensus       139 ------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~-~~~~~ni  209 (287)
T TIGR01214       139 ------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLA-R-ARGVYHL  209 (287)
T ss_pred             ------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhcc-C-CCCeEEE
Confidence                  356788999988877531110 11222222221111       123457999999998885431 1 2456666


Q ss_pred             CCCcc
Q 041276          238 DGGFT  242 (251)
Q Consensus       238 dgG~~  242 (251)
                      .++..
T Consensus       210 ~~~~~  214 (287)
T TIGR01214       210 ANSGQ  214 (287)
T ss_pred             ECCCC
Confidence            55443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.46  E-value=1.6e-11  Score=105.56  Aligned_cols=201  Identities=13%  Similarity=0.056  Sum_probs=132.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------------EEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------------~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .=++|+||||||+|.||     ..+++.|.+.|.++.                  ++..|+++.+.+..++        .
T Consensus        18 ~~~~~~IlVtGgtGfIG-----~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~   84 (370)
T PLN02695         18 PSEKLRICITGAGGFIA-----SHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVT--------K   84 (370)
T ss_pred             CCCCCEEEEECCccHHH-----HHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHH--------h
Confidence            33779999999999999     788888876664433                  3446777776665554        3


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc--------------
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL--------------  141 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~--------------  141 (251)
                      ++|+|||+|+... ........   ....+..|+.++.++++++    ++.+..++|++||...+.              
T Consensus        85 ~~D~Vih~Aa~~~-~~~~~~~~---~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~  156 (370)
T PLN02695         85 GVDHVFNLAADMG-GMGFIQSN---HSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKES  156 (370)
T ss_pred             CCCEEEEcccccC-CccccccC---chhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCcc
Confidence            6899999998653 11111111   2345678999998888876    444556899999864321              


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhC-CCC-------
Q 041276          142 ---STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCR-TPM-------  206 (251)
Q Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~-~~~-------  206 (251)
                         +..+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..|......    ....+....... .+.       
T Consensus       157 ~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~  233 (370)
T PLN02695        157 DAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGK  233 (370)
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCC
Confidence               1223458999999999999887664   5889999999999887532111    012232322211 111       


Q ss_pred             --CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcc
Q 041276          207 --ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       207 --~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                        ..+...+|+++++++++...    .++.+++-+|..
T Consensus       234 ~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~  267 (370)
T PLN02695        234 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  267 (370)
T ss_pred             eEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCc
Confidence              12456899999998877542    246777766644

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.46  E-value=1.3e-11  Score=105.37  Aligned_cols=197  Identities=12%  Similarity=0.105  Sum_probs=127.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc-C-------------------CeeEEEeccCC-CHHHHHHHHHHHHHhcCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK-C-------------------FKVTGSVCDAS-SRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~-~-------------------~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~~   76 (251)
                      |+||||||+|-||     ..+++.+.+. +                   ..+.++..|+. +.+.+.+++        .+
T Consensus         2 ~~ilVtGatGfiG-----s~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~   68 (347)
T PRK11908          2 KKVLILGVNGFIG-----HHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHV--------KK   68 (347)
T ss_pred             cEEEEECCCcHHH-----HHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence            5799999999999     5555544332 1                   13556677886 555554444        46


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-------------
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-------------  143 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-------------  143 (251)
                      +|+|||+|+...+...     .++....+++|+.++.++++++    ++.+ .++|++||...+...             
T Consensus        69 ~d~ViH~aa~~~~~~~-----~~~p~~~~~~n~~~~~~ll~aa----~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~  138 (347)
T PRK11908         69 CDVILPLVAIATPATY-----VKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLV  138 (347)
T ss_pred             CCEEEECcccCChHHh-----hcCcHHHHHHHHHHHHHHHHHH----HhcC-CeEEEEecceeeccCCCcCcCccccccc
Confidence            9999999997542211     1223466799999999888876    3444 589999997543210             


Q ss_pred             -----CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CC----HHHHHHHhhCCC-----
Q 041276          144 -----NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SD----EKFLEEVKCRTP-----  205 (251)
Q Consensus       144 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~----~~~~~~~~~~~~-----  205 (251)
                           ++...|+.+|.+.+.+++.++.+   +++.+..+.|+.+..|......    ..    ..+...+....+     
T Consensus       139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  215 (347)
T PRK11908        139 YGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVD  215 (347)
T ss_pred             cCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEec
Confidence                 11226999999999999887765   5788888888888776532211    11    122222222221     


Q ss_pred             ----CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          206 ----MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       206 ----~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                          ...+...+|++++++.++........|+.+++.++
T Consensus       216 ~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        216 GGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence                12357899999999998864332345888888764

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.45  E-value=8.9e-12  Score=114.73  Aligned_cols=200  Identities=13%  Similarity=0.099  Sum_probs=131.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CC-------------------eeEEEeccCCCHHH-HHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTK-CF-------------------KVTGSVCDASSRAE-REKLMKQVSSLFN   74 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~-------------------~~~~~~~D~~~~~~-~~~~~~~i~~~~~   74 (251)
                      .+|+||||||+|.||     ..+++.|.+. +.                   ++.++..|++|.+. +++++        
T Consensus       314 ~~~~VLVTGatGFIG-----s~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l--------  380 (660)
T PRK08125        314 RRTRVLILGVNGFIG-----NHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHI--------  380 (660)
T ss_pred             cCCEEEEECCCchHH-----HHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHh--------
Confidence            578899999999999     6777766653 22                   24456677777544 23333        


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------  143 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  143 (251)
                      .++|+|||+|+...+...  .   +.....+++|+.++..+++++..    .+ .++|++||...+...           
T Consensus       381 ~~~D~ViHlAa~~~~~~~--~---~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T PRK08125        381 KKCDVVLPLVAIATPIEY--T---RNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDTSN  450 (660)
T ss_pred             cCCCEEEECccccCchhh--c---cCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccccc
Confidence            469999999997652211  1   12245788999999999888743    33 589999996433210           


Q ss_pred             ----C---CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----C----CHHHHHHHhhCCCC--
Q 041276          144 ----N---LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----S----DEKFLEEVKCRTPM--  206 (251)
Q Consensus       144 ----~---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~----~~~~~~~~~~~~~~--  206 (251)
                          +   +...|+.||.+.+.+++.++++   +|+++..+.|+.+..|......    .    ...+........+.  
T Consensus       451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~  527 (660)
T PRK08125        451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_pred             cccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE
Confidence                1   1236999999999999988765   5789999999988887532210    0    11222222221111  


Q ss_pred             -------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          207 -------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       207 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                             ..+...+|++++++.++........|+.+++.+|.
T Consensus       528 ~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        528 VDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             eCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence                   13567999999998887543223468888888763

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.44  E-value=2.3e-11  Score=101.99  Aligned_cols=195  Identities=19%  Similarity=0.228  Sum_probs=132.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE-----------------EEeccCCCHHHHHHHHHHHHHhcCCCc-cEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVT-----------------GSVCDASSRAEREKLMKQVSSLFNGKL-NIL   80 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~-----------------~~~~D~~~~~~~~~~~~~i~~~~~~~i-d~l   80 (251)
                      .||||||+|.||     ..+++.|.+.|.++.                 ++.+|+++.+...+.++        .. |.+
T Consensus         2 ~ILVtG~tGfiG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~~d~v   68 (314)
T COG0451           2 RILVTGGAGFIG-----SHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAK--------GVPDAV   68 (314)
T ss_pred             eEEEEcCcccHH-----HHHHHHHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHh--------cCCCEE
Confidence            399999999999     888999887765443                 34567777755554443        23 999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCC--h
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLG--T  147 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~--~  147 (251)
                      +|+|+........  . . .....+.+|+.++.++++++    ++.+..++|+.||.+...+.           +..  .
T Consensus        69 ih~aa~~~~~~~~--~-~-~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          69 IHLAAQSSVPDSN--A-S-DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EEccccCchhhhh--h-h-CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            9999976522211  1 1 45668999999999999997    44555789996665533321           111  1


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---CHHHHHHHhhCCC-CC---------CCCCHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---DEKFLEEVKCRTP-ME---------RPGEPKE  214 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~-~~---------~~~~~~d  214 (251)
                      .|+.+|.+.+.+++.++.   ..++.+..+.|+.+-.|.......   ...+........+ ..         .+...+|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  217 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD  217 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHH
Confidence            499999999999998888   468999999999888877655321   1222222333333 11         1355899


Q ss_pred             HHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          215 VSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       215 va~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      +++++..++......    .+++.++.
T Consensus       218 ~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         218 VADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHhCCCCc----EEEeCCCC
Confidence            999999999654332    77777764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.43  E-value=1.2e-11  Score=106.99  Aligned_cols=186  Identities=15%  Similarity=0.162  Sum_probs=123.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------------CeeEEEeccCCCHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------------FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ..++++||||||+|.||     ..+++.|.+.+                          ..+.++.+|++|+++++++++
T Consensus        57 ~~~~~kVLVtGatG~IG-----~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~  131 (390)
T PLN02657         57 EPKDVTVLVVGATGYIG-----KFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLF  131 (390)
T ss_pred             CCCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHH
Confidence            45678999999999999     44444443322                          245678899999999999887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ..   . .++|+||||++... ...         ...+++|+.++.++++++    ++.+.+++|++||.....   ...
T Consensus       132 ~~---~-~~~D~Vi~~aa~~~-~~~---------~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~  190 (390)
T PLN02657        132 SE---G-DPVDVVVSCLASRT-GGV---------KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLL  190 (390)
T ss_pred             Hh---C-CCCcEEEECCccCC-CCC---------ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cch
Confidence            53   1 27999999998532 110         123567888877777765    556667999999987643   345


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC----------CCCCCCHHHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP----------MERPGEPKEVSS  217 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~dva~  217 (251)
                      .|..+|...+...+.     ...+++...+.|+.+..++..       .........|          ...+...+|+|+
T Consensus       191 ~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-------~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        191 EFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-------QVEIVKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             HHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-------HHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence            688889888776643     246899999999876543221       1111111111          112357889999


Q ss_pred             HHHHHcCCCCCCccccEEEeCC
Q 041276          218 LVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      .++.++.+..  ..|+.+.+.|
T Consensus       259 ~i~~~~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        259 FIADCVLDES--KINKVLPIGG  278 (390)
T ss_pred             HHHHHHhCcc--ccCCEEEcCC
Confidence            9988885432  3578898876

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.43  E-value=2e-11  Score=102.51  Aligned_cols=199  Identities=14%  Similarity=0.144  Sum_probs=126.2

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE-----------------eccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS-----------------VCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~-----------------~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      ||||||+|.||     ..+++.+.+.+. .+..+                 ..|+.+.+.++.+.+.   .+ .++|+||
T Consensus         1 ilItGatG~iG-----~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~-~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIG-----SNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKG---AF-GKIEAIF   71 (314)
T ss_pred             CEEeCCcchhh-----HHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhh---cc-CCCCEEE
Confidence            69999999999     888888887775 34322                 2344444444433321   23 5799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYA  150 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~  150 (251)
                      |+|+... .      ..++....+++|+.++..+++++.    +.+ .++|++||...+..           ..+...|+
T Consensus        72 h~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~  139 (314)
T TIGR02197        72 HQGACSD-T------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVYG  139 (314)
T ss_pred             ECccccC-c------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHH
Confidence            9999643 1      123446788999999999998874    333 47999999764421           11456899


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--CCC--HHHHHHHhhCCCC---------------CCCCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--LSD--EKFLEEVKCRTPM---------------ERPGE  211 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--~~~--~~~~~~~~~~~~~---------------~~~~~  211 (251)
                      .+|.+.+.+++....+. ..++++..+.|+.+..|-....  ...  ..+........+.               ..+..
T Consensus       140 ~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVY  218 (314)
T ss_pred             HHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEE
Confidence            99999999987643321 2346778888887777643211  111  1222222211111               23567


Q ss_pred             HHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+|++++++.++..    ..+..+++.++..++
T Consensus       219 v~D~a~~i~~~~~~----~~~~~yni~~~~~~s  247 (314)
T TIGR02197       219 VKDVVDVNLWLLEN----GVSGIFNLGTGRARS  247 (314)
T ss_pred             HHHHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence            89999999998864    235688887776543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.42  E-value=2.5e-11  Score=101.46  Aligned_cols=140  Identities=16%  Similarity=0.120  Sum_probs=99.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-------VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT   90 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~   90 (251)
                      ++||||||+|-||     ..+.+.+.+.+ ++..+       ..|++|.+.++++++.      -++|+|||+|+.....
T Consensus         1 m~iLVtG~~GfiG-----s~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~D~Vih~Aa~~~~~   68 (299)
T PRK09987          1 MNILLFGKTGQVG-----WELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRK------IRPDVIVNAAAHTAVD   68 (299)
T ss_pred             CeEEEECCCCHHH-----HHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHh------cCCCEEEECCccCCcc
Confidence            4699999999999     88888888776 44433       3699999999888864      3799999999976421


Q ss_pred             CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhHHhHHHHHHH
Q 041276           91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYAATKGAMNQL  159 (251)
Q Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~sK~a~~~~  159 (251)
                      .     ..++-+..+.+|+.++.++++++    ++.+ .++|++||...+.+           ..+...|+.+|.+.+.+
T Consensus        69 ~-----~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~  138 (299)
T PRK09987         69 K-----AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKA  138 (299)
T ss_pred             h-----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence            1     11223566789999999999887    3333 48999998543211           12335799999999998


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCC
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPL  186 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~  186 (251)
                      ++.+..       +...+.|+++..|-
T Consensus       139 ~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        139 LQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHhCC-------CEEEEecceecCCC
Confidence            865432       23667777777664

>PLN02778 3,5-epimerase/4-reductase

Probab=99.41  E-value=9.5e-11  Score=97.87  Aligned_cols=196  Identities=14%  Similarity=0.147  Sum_probs=123.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE   95 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~   95 (251)
                      ..++||||||+|.||     ..+++.+.+.+.++.....|+.+.+.+...++.      .++|+|||+|+......  .+
T Consensus         8 ~~~kiLVtG~tGfiG-----~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~------~~~D~ViH~Aa~~~~~~--~~   74 (298)
T PLN02778          8 ATLKFLIYGKTGWIG-----GLLGKLCQEQGIDFHYGSGRLENRASLEADIDA------VKPTHVFNAAGVTGRPN--VD   74 (298)
T ss_pred             CCCeEEEECCCCHHH-----HHHHHHHHhCCCEEEEecCccCCHHHHHHHHHh------cCCCEEEECCcccCCCC--ch
Confidence            347899999999999     899999999988887777888888777666653      37999999999764211  11


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc--cc------------c----CCCCChhhHHhHHHHH
Q 041276           96 YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC--GV------------L----STNLGTIYAATKGAMN  157 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~--~~------------~----~~~~~~~Y~~sK~a~~  157 (251)
                      ...+.-...+++|+.++.++++++.    +.+. +++++||..  +.            .    +.+....|+.||.+.+
T Consensus        75 ~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E  149 (298)
T PLN02778         75 WCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVE  149 (298)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHH
Confidence            1223456789999999999999884    3332 344454422  11            0    0112357999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC---C-CCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP---M-ERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      .+++.++..   .++|+     +....+-..   ....+...+....+   . ..+...+|++++++.++...   .+| 
T Consensus       150 ~~~~~y~~~---~~lr~-----~~~~~~~~~---~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~---~~g-  214 (298)
T PLN02778        150 ELLKNYENV---CTLRV-----RMPISSDLS---NPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRN---LTG-  214 (298)
T ss_pred             HHHHHhhcc---EEeee-----cccCCcccc---cHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCC---CCC-
Confidence            999876532   33443     221111000   01123333332211   1 23567899999998887432   234 


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .+++.+|-.++
T Consensus       215 ~yNigs~~~iS  225 (298)
T PLN02778        215 IYNFTNPGVVS  225 (298)
T ss_pred             eEEeCCCCccc
Confidence            88886665543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.39  E-value=1.9e-11  Score=107.17  Aligned_cols=206  Identities=12%  Similarity=0.093  Sum_probs=128.7

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHH---------H-HHHhcCCCccEEEEc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS-RAEREKLMK---------Q-VSSLFNGKLNILINN   83 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~---------~-i~~~~~~~id~lv~~   83 (251)
                      .++|+||||||+|.||     ..+++.|.+.+.++..+.-+... .+.+...+.         . +.... .++|.|||+
T Consensus       117 ~~~~kILVTGatGfIG-----s~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l-~~~D~ViHl  190 (442)
T PLN02206        117 RKGLRVVVTGGAGFVG-----SHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPIL-LEVDQIYHL  190 (442)
T ss_pred             cCCCEEEEECcccHHH-----HHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhh-cCCCEEEEe
Confidence            3679999999999999     89999998888777654322111 111110000         0 01112 368999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC----------------CCCCh
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS----------------TNLGT  147 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~----------------~~~~~  147 (251)
                      |+...+.. . +.   +....+++|+.++.++++++    ++.+ .++|++||...+..                .....
T Consensus       191 Aa~~~~~~-~-~~---~p~~~~~~Nv~gt~nLleaa----~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s  260 (442)
T PLN02206        191 ACPASPVH-Y-KF---NPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRS  260 (442)
T ss_pred             eeecchhh-h-hc---CHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccc
Confidence            98654211 1 11   23568899999999999887    3334 48999999765421                11135


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHHHHhhCCCC---------CCCCCHHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPM---------ERPGEPKEVS  216 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~dva  216 (251)
                      .|+.+|.+.+.+++.+.+.   +++++..+.|+.+..|.......  -..+........+.         ..+...+|+|
T Consensus       261 ~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva  337 (442)
T PLN02206        261 CYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV  337 (442)
T ss_pred             hHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHH
Confidence            7999999999998877554   47888888888877764321100  12233333222121         1246699999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          217 SLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++++.++...   ..| .+++.+|..+
T Consensus       338 ~ai~~a~e~~---~~g-~yNIgs~~~~  360 (442)
T PLN02206        338 EGLMRLMEGE---HVG-PFNLGNPGEF  360 (442)
T ss_pred             HHHHHHHhcC---CCc-eEEEcCCCce
Confidence            9998887432   234 7888776544

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.32  E-value=2.3e-10  Score=100.24  Aligned_cols=205  Identities=12%  Similarity=0.067  Sum_probs=128.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHH----------HHHHHhcCCCccEEEEcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS-RAEREKLM----------KQVSSLFNGKLNILINNV   84 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~----------~~i~~~~~~~id~lv~~a   84 (251)
                      ++++||||||+|.||     ..+++.|.+.+.++..+.-+... .+......          +.+.... .++|+|||+|
T Consensus       119 ~~mkILVTGatGFIG-----s~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~-~~~D~ViHlA  192 (436)
T PLN02166        119 KRLRIVVTGGAGFVG-----SHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPIL-LEVDQIYHLA  192 (436)
T ss_pred             CCCEEEEECCccHHH-----HHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccc-cCCCEEEECc
Confidence            567899999999999     89999998888777655322211 11111110          0001112 4699999999


Q ss_pred             cCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC----------------CCCChh
Q 041276           85 GTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS----------------TNLGTI  148 (251)
Q Consensus        85 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~----------------~~~~~~  148 (251)
                      +...+.. . ..   +-...++.|+.++..+++++.    +.+ .++|++||...+..                ......
T Consensus       193 a~~~~~~-~-~~---~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~  262 (436)
T PLN02166        193 CPASPVH-Y-KY---NPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  262 (436)
T ss_pred             eeccchh-h-cc---CHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCc
Confidence            8654211 1 11   235778999999999998874    333 48999998754321                112346


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHHHHhhCCCC---------CCCCCHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPM---------ERPGEPKEVSS  217 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~dva~  217 (251)
                      |+.+|.+.+.+++.+.+.   .++++..+.|+.+..|-......  -..+........+.         ..+...+|+++
T Consensus       263 Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~  339 (436)
T PLN02166        263 YDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVD  339 (436)
T ss_pred             hHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHH
Confidence            999999999999887665   47888888888887764321100  12233333322221         12456899999


Q ss_pred             HHHHHcCCCCCCccccEEEeCCCccc
Q 041276          218 LVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++..++...   . +..+++.+|..+
T Consensus       340 ai~~~~~~~---~-~giyNIgs~~~~  361 (436)
T PLN02166        340 GLVALMEGE---H-VGPFNLGNPGEF  361 (436)
T ss_pred             HHHHHHhcC---C-CceEEeCCCCcE
Confidence            998887432   2 347888766543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=1.4e-10  Score=93.62  Aligned_cols=130  Identities=15%  Similarity=0.131  Sum_probs=101.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK-------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      ++||||||.|-||     .....+|.+.|.+                   +.++..|+.|.+.+++++++      .+||
T Consensus         1 ~~iLVtGGAGYIG-----SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~------~~id   69 (329)
T COG1087           1 MKVLVTGGAGYIG-----SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEE------NKID   69 (329)
T ss_pred             CeEEEecCcchhH-----HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHh------cCCC
Confidence            4799999999999     7777777766532                   45778899999999888876      5899


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCCh
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGT  147 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~  147 (251)
                      .|+|.||... .    ..+.+.-.+.++.|+.+++.+++++    ++.+-.+|||-||.+.+-.           ..+..
T Consensus        70 aViHFAa~~~-V----gESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          70 AVVHFAASIS-V----GESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EEEECccccc-c----chhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCC
Confidence            9999999765 2    2445666788999999999988885    6666567887666554421           22345


Q ss_pred             hhHHhHHHHHHHHHHHHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEW  167 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~  167 (251)
                      .|+.||...+.+.+.+++..
T Consensus       141 PYG~sKlm~E~iL~d~~~a~  160 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKAN  160 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhC
Confidence            89999999999999988873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.27  E-value=2.3e-10  Score=101.04  Aligned_cols=162  Identities=17%  Similarity=0.202  Sum_probs=117.2

Q ss_pred             CCCEEE----EecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           16 QGMTAL----VTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        16 ~~k~vl----ItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      .|..+|    |+||++|+|     .++.+.+...|.++.....+-.         ....... .+++.+++.+-...   
T Consensus        33 ~~~~~~~~~~l~~~~~g~~-----~~~~~~~~~~g~~v~~~~~~~~---------~~~~~~~-~~~~~~~~d~~~~~---   94 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLA-----EALAALLAGLGYDVVANNDGGL---------TWAAGWG-DRFGALVFDATGIT---   94 (450)
T ss_pred             CCCCCCCCceEEccCchhH-----HHHHHHHhhCCCeeeecCcccc---------ccccCcC-CcccEEEEECCCCC---
Confidence            345556    888899999     8888888888877665432221         0011112 47886665443221   


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCC
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN  171 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  171 (251)
                           +.+++        ...+.+.+..++.|..  .|+||+++|..+..   ....|+++|+++.+++|++++|+ +.+
T Consensus        95 -----~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~g  155 (450)
T PRK08261         95 -----DPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RRG  155 (450)
T ss_pred             -----CHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hcC
Confidence                 23333        2444667777777753  48999999987753   33469999999999999999999 779


Q ss_pred             eEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcc
Q 041276          172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       172 i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      ++++.|.|++                            ..+++++..+.+++++.+.+++||.+.++++..
T Consensus       156 i~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        156 ATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             CEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecCCcc
Confidence            9999998864                            247889999999999999999999999999865

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.26  E-value=2.7e-10  Score=95.98  Aligned_cols=187  Identities=16%  Similarity=0.100  Sum_probs=117.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++|+||||||.||     ..+++.+.+.|.+                  +.++..|++|++++.+++        .++|+
T Consensus         1 MkIlVtGatG~iG-----~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al--------~g~d~   67 (317)
T CHL00194          1 MSLLVIGATGTLG-----RQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSF--------KGVTA   67 (317)
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHH--------CCCCE
Confidence            3699999999999     6666666555433                  345567888888877766        46999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      |||+++... .         +.....++|+.++.++++++    ++.+-.++|++||..+.. . +...|..+|...+.+
T Consensus        68 Vi~~~~~~~-~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~  131 (317)
T CHL00194         68 IIDASTSRP-S---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQK  131 (317)
T ss_pred             EEECCCCCC-C---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc-c-CCChHHHHHHHHHHH
Confidence            999876432 1         11234567888887777776    555556999999864421 1 234578888877665


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHH----HhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE----VKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      .+       ..++++..+.|+.+..++...... + ....    .........+...+|+|+.++.++....  ..|+.+
T Consensus       132 l~-------~~~l~~tilRp~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~  200 (317)
T CHL00194        132 LK-------KSGIPYTIFRLAGFFQGLISQYAI-P-ILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTF  200 (317)
T ss_pred             HH-------HcCCCeEEEeecHHhhhhhhhhhh-h-hccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEE
Confidence            53       357888889998654332211100 0 0000    0000001133567999999988885432  358899


Q ss_pred             EeCCCcccc
Q 041276          236 CVDGGFTVN  244 (251)
Q Consensus       236 ~vdgG~~~~  244 (251)
                      ++.|+..++
T Consensus       201 ni~g~~~~s  209 (317)
T CHL00194        201 PLVGPKSWN  209 (317)
T ss_pred             EecCCCccC
Confidence            998886543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.25  E-value=8.5e-11  Score=97.53  Aligned_cols=198  Identities=17%  Similarity=0.189  Sum_probs=121.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV   94 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~   94 (251)
                      ++|||||++|-||     ..+.+.+...+.++...   .+|++|.+++.+++++.      ++|+|||+|+... .    
T Consensus         1 MriLI~GasG~lG-----~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~------~pd~Vin~aa~~~-~----   64 (286)
T PF04321_consen    1 MRILITGASGFLG-----SALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAF------KPDVVINCAAYTN-V----   64 (286)
T ss_dssp             EEEEEETTTSHHH-----HHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--------SEEEE-------H----
T ss_pred             CEEEEECCCCHHH-----HHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHh------CCCeEeccceeec-H----
Confidence            4799999999999     89999999877667666   78999999999999763      7999999999754 1    


Q ss_pred             CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhHHhHHHHHHHHHHH
Q 041276           95 EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYAATKGAMNQLAKNL  163 (251)
Q Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l  163 (251)
                      +.-.++-+..+.+|+.++..+++.+    .+.+ .++|++||..-+.+.           .+...|+.+|...+...+..
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~----~~~~-~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEAC----KERG-ARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHH----HHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHH----HHcC-CcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            2223345778999999999999887    3333 699999996543322           23468999999988887752


Q ss_pred             HHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC-------CCCCCCHHHHHHHHHHHcCCCCC-CccccEE
Q 041276          164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP-------MERPGEPKEVSSLVAFLCMPAAS-YITGQTI  235 (251)
Q Consensus       164 a~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~-~~~G~~i  235 (251)
                          .+   ....+.++++-.+-.+.+  -..+........+       ...+...+|+|+.+..|+..... ...+.++
T Consensus       140 ----~~---~~~IlR~~~~~g~~~~~~--~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giy  210 (286)
T PF04321_consen  140 ----CP---NALILRTSWVYGPSGRNF--LRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIY  210 (286)
T ss_dssp             -----S---SEEEEEE-SEESSSSSSH--HHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEE
T ss_pred             ----cC---CEEEEecceecccCCCch--hhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeE
Confidence                11   456677888776622211  1222233322211       11234589999999999954321 1124466


Q ss_pred             EeCCCccccc
Q 041276          236 CVDGGFTVNG  245 (251)
Q Consensus       236 ~vdgG~~~~~  245 (251)
                      .+.|.-.++.
T Consensus       211 h~~~~~~~S~  220 (286)
T PF04321_consen  211 HLSGPERVSR  220 (286)
T ss_dssp             E---BS-EEH
T ss_pred             EEecCcccCH
Confidence            6766655443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.24  E-value=6.9e-10  Score=90.17  Aligned_cols=177  Identities=15%  Similarity=0.177  Sum_probs=120.8

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCC
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCFKVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEY   96 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~   96 (251)
                      +||||++|-+|     .++.+.+. .+..+...   .+|++|++.+.+++.+      -++|+|||+|++...     +.
T Consensus         3 iLi~G~~GqLG-----~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~------~~PDvVIn~AAyt~v-----D~   65 (281)
T COG1091           3 ILITGANGQLG-----TELRRALP-GEFEVIATDRAELDITDPDAVLEVIRE------TRPDVVINAAAYTAV-----DK   65 (281)
T ss_pred             EEEEcCCChHH-----HHHHHHhC-CCceEEeccCccccccChHHHHHHHHh------hCCCEEEECcccccc-----cc
Confidence            99999999999     77777776 33344433   5799999999999987      489999999998752     22


Q ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhHHhHHHHHHHHHHHHH
Q 041276           97 MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYAATKGAMNQLAKNLAC  165 (251)
Q Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~  165 (251)
                      .+.+-+..+.+|..++.++++++    .+. +..+|++|+-.-..+           ..+...|+.||.+-+..++... 
T Consensus        66 aE~~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~-  139 (281)
T COG1091          66 AESEPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG-  139 (281)
T ss_pred             ccCCHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC-
Confidence            23335788999999999999997    333 368999997443322           2345689999999888886553 


Q ss_pred             HHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC-------CCCCCCHHHHHHHHHHHcCCCC
Q 041276          166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP-------MERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       166 e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~  227 (251)
                            -+...+...|+-....+.+.  ..+++....+.+       .+.+...+|+|+.+..|+....
T Consensus       140 ------~~~~I~Rtswv~g~~g~nFv--~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~  200 (281)
T COG1091         140 ------PRHLILRTSWVYGEYGNNFV--KTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK  200 (281)
T ss_pred             ------CCEEEEEeeeeecCCCCCHH--HHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc
Confidence                  22344455555554433321  122222222222       2345678999999999886543

>PLN02996 fatty acyl-CoA reductase

Probab=99.24  E-value=8e-10  Score=98.23  Aligned_cols=170  Identities=18%  Similarity=0.131  Sum_probs=108.5

Q ss_pred             CeeEEEeccCCC-------HHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHH
Q 041276           47 FKVTGSVCDASS-------RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA  119 (251)
Q Consensus        47 ~~~~~~~~D~~~-------~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  119 (251)
                      .++.++..|+++       .+.++.++        .++|+|||+|+... .    .   +..+..+++|+.++..+++.+
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~-~----~---~~~~~~~~~Nv~gt~~ll~~a  147 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTN-F----D---ERYDVALGINTLGALNVLNFA  147 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHH--------hCCCEEEECccccC-C----c---CCHHHHHHHHHHHHHHHHHHH
Confidence            467888999884       33344444        36999999999654 1    1   235678899999999998887


Q ss_pred             HHHHHhCCCceEEEecccccccCCC-------------------------------------------------------
Q 041276          120 HPLLKASGAGNIILVSSVCGVLSTN-------------------------------------------------------  144 (251)
Q Consensus       120 ~~~m~~~~~g~iv~vss~~~~~~~~-------------------------------------------------------  144 (251)
                      ...   .+..++|++||...+....                                                       
T Consensus       148 ~~~---~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (491)
T PLN02996        148 KKC---VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGM  224 (491)
T ss_pred             Hhc---CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhch
Confidence            331   1335899999865432100                                                       


Q ss_pred             -------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------HHHHHHHhhCCC-----
Q 041276          145 -------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------EKFLEEVKCRTP-----  205 (251)
Q Consensus       145 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~-----  205 (251)
                             ....|+.||++.+.+++..+     .++.+..+.|..+..+...+....       ..+...+....+     
T Consensus       225 ~~~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~g  299 (491)
T PLN02996        225 ERAKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLA  299 (491)
T ss_pred             hHHHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEec
Confidence                   01359999999999996542     379999999999988765543221       111111111111     


Q ss_pred             ----CCCCCCHHHHHHHHHHHcCCCC-CCccccEEEeCCC
Q 041276          206 ----MERPGEPKEVSSLVAFLCMPAA-SYITGQTICVDGG  240 (251)
Q Consensus       206 ----~~~~~~~~dva~~~~~l~~~~~-~~~~G~~i~vdgG  240 (251)
                          ...+..++|++++++.++.... ..-.++++++.+|
T Consensus       300 dg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        300 DPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             CCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence                1234568999999877765321 1124678888877

>PRK05865 hypothetical protein; Provisional

Probab=99.21  E-value=3.7e-10  Score=105.03  Aligned_cols=166  Identities=13%  Similarity=0.121  Sum_probs=113.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe---------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK---------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNILIN   82 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~---------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~   82 (251)
                      ++|+||||+|.||     ..+++.+.+.|.+               +.++.+|++|.+++.+++        .++|+|||
T Consensus         1 MkILVTGATGfIG-----s~La~~Ll~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al--------~~vD~VVH   67 (854)
T PRK05865          1 MRIAVTGASGVLG-----RGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAM--------TGADVVAH   67 (854)
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHH--------hCCCEEEE
Confidence            3699999999999     7777777665533               345678999998888777        36999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHH
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN  162 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~  162 (251)
                      +|+... .             .+++|+.++.+++++    +++.+.++||++||..              |.+.+.+++ 
T Consensus        68 lAa~~~-~-------------~~~vNv~GT~nLLeA----a~~~gvkr~V~iSS~~--------------K~aaE~ll~-  114 (854)
T PRK05865         68 CAWVRG-R-------------NDHINIDGTANVLKA----MAETGTGRIVFTSSGH--------------QPRVEQMLA-  114 (854)
T ss_pred             CCCccc-c-------------hHHHHHHHHHHHHHH----HHHcCCCeEEEECCcH--------------HHHHHHHHH-
Confidence            998542 1             367899998777655    4666667999999863              777766553 


Q ss_pred             HHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh--CCCCC------CCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          163 LACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC--RTPME------RPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       163 la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                            .+++.+..+.|+.+..|...      .+......  ..+.+      .+...+|+|++++.++....  ..|..
T Consensus       115 ------~~gl~~vILRp~~VYGP~~~------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~ggv  180 (854)
T PRK05865        115 ------DCGLEWVAVRCALIFGRNVD------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSGP  180 (854)
T ss_pred             ------HcCCCEEEEEeceEeCCChH------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCCe
Confidence                  25788999999988876421      11221111  11111      24678999999988874221  23557


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      +++.+|..+
T Consensus       181 yNIgsg~~~  189 (854)
T PRK05865        181 VNLAAPGEL  189 (854)
T ss_pred             EEEECCCcc
Confidence            777776543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.16  E-value=1.3e-09  Score=100.55  Aligned_cols=197  Identities=18%  Similarity=0.122  Sum_probs=121.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHh--cCC------------------------eeEEEeccCCCHHH--HHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKT--KCF------------------------KVTGSVCDASSRAE--REKLMKQV   69 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~--~~~------------------------~~~~~~~D~~~~~~--~~~~~~~i   69 (251)
                      ++||||||+|.||     ..+++.|.+  .+.                        ++.++..|+++++.  ....++. 
T Consensus         1 m~ILVTGatGfIG-----~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~-   74 (657)
T PRK07201          1 MRYFVTGGTGFIG-----RRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE-   74 (657)
T ss_pred             CeEEEeCCccHHH-----HHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH-
Confidence            3699999999999     566665552  232                        34455566666421  0111122 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC------
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST------  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~------  143 (251)
                         . .++|+|||+|+.....     .+   .....++|+.++..+++.+    ++.+..++|++||...+...      
T Consensus        75 ---l-~~~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e  138 (657)
T PRK07201         75 ---L-GDIDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFRE  138 (657)
T ss_pred             ---h-cCCCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCcccc
Confidence               2 4799999999965311     11   2456688999998888776    44445789999987654211      


Q ss_pred             -------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHH---HHHHHhh---CCCC
Q 041276          144 -------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEK---FLEEVKC---RTPM  206 (251)
Q Consensus       144 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~---~~~~~~~---~~~~  206 (251)
                             .....|+.+|...+.+++.      ..++++..+.|+.+..+-.....    ....   .......   ..+.
T Consensus       139 ~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (657)
T PRK07201        139 DDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPM  212 (657)
T ss_pred             ccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCccccc
Confidence                   1234699999999988752      24789999999988775321110    0001   1111110   0111


Q ss_pred             -------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          207 -------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       207 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                             ..+...+|+++++..++..  ...+|+.+.+.++..++
T Consensus       213 ~~~~~~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s  255 (657)
T PRK07201        213 VGPDGGRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQR  255 (657)
T ss_pred             ccCCCCeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCc
Confidence                   1234589999999988853  33578999998776543

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.15  E-value=2.7e-08  Score=81.71  Aligned_cols=223  Identities=15%  Similarity=0.151  Sum_probs=154.1

Q ss_pred             CCEEEEecC-CCCcCcHHHHHHHHHHHHhcC---------------------CeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           17 GMTALVTGG-TKGLGNEAELNECLREWKTKC---------------------FKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        17 ~k~vlItGa-s~giG~~~~~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ..+|||.|. +.-|+     ..++-++...|                     ..+.....|..++.++...+.+......
T Consensus         3 ~evVvI~Gs~~~Plt-----R~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLT-----RSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccH-----HHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            368888885 78888     22332332222                     2355566777666666666666655441


Q ss_pred             -C------------CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCceEEEec-ccc
Q 041276           75 -G------------KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS--GAGNIILVS-SVC  138 (251)
Q Consensus        75 -~------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~g~iv~vs-s~~  138 (251)
                       .            .+..|+.......+.++++..+.+.|.+.++.|+..++.+++.++|+|+.+  ...+||++. |+.
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence             1            466777777766678899999999999999999999999999999999982  235666555 887


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--------CCCH--------------HH
Q 041276          139 GVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--------LSDE--------------KF  196 (251)
Q Consensus       139 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--------~~~~--------------~~  196 (251)
                      .....|..+.-.+..+++.+|.++|++|+.++||.|..+..|.++-......        ...+              .+
T Consensus       158 ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y  237 (299)
T PF08643_consen  158 SSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNY  237 (299)
T ss_pred             hccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhH
Confidence            8888888899999999999999999999999999999999998876632110        0111              11


Q ss_pred             HHHHhhCCCCC----CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccccc
Q 041276          197 LEEVKCRTPME----RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       197 ~~~~~~~~~~~----~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      ........+.+    +-.+..+.=.+++.++....   +|.++.+.-|..++.+.
T Consensus       238 ~~~~~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~~---~~~v~y~G~Gs~~Y~~i  289 (299)
T PF08643_consen  238 SSIQSSAIPAGSGRGKGSSLRELHNAVFDALYGSS---KGSVVYVGRGSRIYDWI  289 (299)
T ss_pred             HHHHhhccCCCCCCCCCCHHHHHHHHHHHhhcCCC---CCCEEEEcCceeHHHHH
Confidence            11112212222    22234566666666665433   79999999988776553

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.15  E-value=7.6e-09  Score=95.72  Aligned_cols=142  Identities=13%  Similarity=0.147  Sum_probs=100.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE   95 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~   95 (251)
                      ..++||||||+|-||     ..+.+.+.+.+.++.+...|++|.+.+.+.+..      -++|+|||+|+......  .+
T Consensus       379 ~~mkiLVtGa~G~iG-----~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~------~~pd~Vih~Aa~~~~~~--~~  445 (668)
T PLN02260        379 PSLKFLIYGRTGWIG-----GLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRN------VKPTHVFNAAGVTGRPN--VD  445 (668)
T ss_pred             CCceEEEECCCchHH-----HHHHHHHHhCCCeEEeeccccccHHHHHHHHHh------hCCCEEEECCcccCCCC--CC
Confidence            446899999999999     888999988887776677899999988777764      27999999999764111  12


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-----------C-------CCCChhhHHhHHHHH
Q 041276           96 YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-----------S-------TNLGTIYAATKGAMN  157 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-----------~-------~~~~~~Y~~sK~a~~  157 (251)
                      ...++-...+++|+.++..+++++.    +.+ .+++++||...+.           +       .+....|+.||.+.+
T Consensus       446 ~~~~~~~~~~~~N~~gt~~l~~a~~----~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E  520 (668)
T PLN02260        446 WCESHKVETIRANVVGTLTLADVCR----ENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVE  520 (668)
T ss_pred             hHHhCHHHHHHHHhHHHHHHHHHHH----HcC-CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHH
Confidence            2334557889999999999999984    344 3456665532110           1       112367999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEe
Q 041276          158 QLAKNLACEWARDNIRINSVA  178 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~  178 (251)
                      .+++.+..   ...+|+..+.
T Consensus       521 ~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        521 ELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             HHHHhhhh---heEEEEEEec
Confidence            99987642   2345555444

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.05  E-value=6.9e-09  Score=83.09  Aligned_cols=205  Identities=15%  Similarity=0.038  Sum_probs=137.7

Q ss_pred             CEEEEecCCCCcCc-----------------HHHH-----HHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           18 MTALVTGGTKGLGN-----------------EAEL-----NECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        18 k~vlItGas~giG~-----------------~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      |.++||||.+-||+                 -.++     ...++..+. ..+..++..|+.+...+.-++.+      .
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n-~p~ykfv~~di~~~~~~~~~~~~------~   79 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN-SPNYKFVEGDIADADLVLYLFET------E   79 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc-CCCceEeeccccchHHHHhhhcc------C
Confidence            99999999999990                 0111     111222221 24678899999999998888875      7


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC------------C
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS------------T  143 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~------------~  143 (251)
                      ++|.|+|-|........+.     +--.....|+.++..+++......   +..++|++|+-.-+..            .
T Consensus        80 ~id~vihfaa~t~vd~s~~-----~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~  151 (331)
T KOG0747|consen   80 EIDTVIHFAAQTHVDRSFG-----DSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLL  151 (331)
T ss_pred             chhhhhhhHhhhhhhhhcC-----chHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccC
Confidence            8999999999765222221     123346679999998888874433   3358999998543322            1


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC---------CCCCCCHHH
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP---------MERPGEPKE  214 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  214 (251)
                      .+...|+++|+|.+++.+++.+.   +|+.+..+.-+.|..|-+.+...-+.+........+         ...+.-.+|
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD  228 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVED  228 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHH
Confidence            23457999999999999999887   688899999999988877655444444443222211         122345899


Q ss_pred             HHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          215 VSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       215 va~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++++-..+-. .  -.|+..++.--..+
T Consensus       229 ~~ea~~~v~~K-g--~~geIYNIgtd~e~  254 (331)
T KOG0747|consen  229 VSEAFKAVLEK-G--ELGEIYNIGTDDEM  254 (331)
T ss_pred             HHHHHHHHHhc-C--CccceeeccCcchh
Confidence            99998777743 2  25788777554433

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.04  E-value=4e-09  Score=86.13  Aligned_cols=136  Identities=20%  Similarity=0.206  Sum_probs=101.1

Q ss_pred             CCEEEEecCCCCcCc-----------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           17 GMTALVTGGTKGLGN-----------------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        17 ~k~vlItGas~giG~-----------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++.||||||.|-||.                       .+++..+ +++...+..+.++..|+.|.+.++++|++     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~-~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~-----   75 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRV-RQLLGEGKSVFFVEGDLNDAEALEKLFSE-----   75 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHH-HHhcCCCCceEEEEeccCCHHHHHHHHhh-----
Confidence            589999999999992                       1222222 22223357899999999999999999987     


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------  142 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------  142 (251)
                       -++|.|+|-|+......     +.+........|+.++++++..+    ++.+...+|+.||...+..           
T Consensus        76 -~~fd~V~Hfa~~~~vge-----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~  145 (343)
T KOG1371|consen   76 -VKFDAVMHFAALAAVGE-----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDP  145 (343)
T ss_pred             -cCCceEEeehhhhccch-----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCC
Confidence             37999999999765222     23333778889999999888775    6666678999888665432           


Q ss_pred             CC-CChhhHHhHHHHHHHHHHHHHHHc
Q 041276          143 TN-LGTIYAATKGAMNQLAKNLACEWA  168 (251)
Q Consensus       143 ~~-~~~~Y~~sK~a~~~~~~~la~e~~  168 (251)
                      .. +...|+.+|.+++.+++.+..-+.
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            12 456899999999999998877643

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.02  E-value=6.2e-08  Score=96.64  Aligned_cols=170  Identities=18%  Similarity=0.149  Sum_probs=104.4

Q ss_pred             eeEEEeccCCCH------HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHH
Q 041276           48 KVTGSVCDASSR------AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP  121 (251)
Q Consensus        48 ~~~~~~~D~~~~------~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (251)
                      ++.++..|++++      +..+.+.        .++|++||+|+... .    ...   +......|+.++..+++.+  
T Consensus      1035 ~i~~~~gDl~~~~lgl~~~~~~~l~--------~~~d~iiH~Aa~~~-~----~~~---~~~~~~~nv~gt~~ll~~a-- 1096 (1389)
T TIGR03443      1035 RIEVVLGDLSKEKFGLSDEKWSDLT--------NEVDVIIHNGALVH-W----VYP---YSKLRDANVIGTINVLNLC-- 1096 (1389)
T ss_pred             ceEEEeccCCCccCCcCHHHHHHHH--------hcCCEEEECCcEec-C----ccC---HHHHHHhHHHHHHHHHHHH--
Confidence            566777777644      2222221        46999999999654 1    112   3334567999999888876  


Q ss_pred             HHHhCCCceEEEecccccccC-----------------C-----------CCChhhHHhHHHHHHHHHHHHHHHccCCeE
Q 041276          122 LLKASGAGNIILVSSVCGVLS-----------------T-----------NLGTIYAATKGAMNQLAKNLACEWARDNIR  173 (251)
Q Consensus       122 ~m~~~~~g~iv~vss~~~~~~-----------------~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~  173 (251)
                        ++.+..+++++||.+.+..                 .           .....|+.||.+.+.+++.++.    .|+.
T Consensus      1097 --~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~ 1170 (1389)
T TIGR03443      1097 --AEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLR 1170 (1389)
T ss_pred             --HhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCC
Confidence              3344468999999755421                 0           0123599999999999876533    4899


Q ss_pred             EEEEecCcccCCCCCCCCCCHHHHHHHh------hCCCC----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          174 INSVAPWFITTPLTEPYLSDEKFLEEVK------CRTPM----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       174 v~~i~pG~v~t~~~~~~~~~~~~~~~~~------~~~~~----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      +..+.||.+..+.........++.....      ...|.    ..+...++++++++.++........+..+.+.++.
T Consensus      1171 ~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1171 GCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             EEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            9999999998775433322222222221      11221    23567899999999887543222234456666553

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.01  E-value=8.4e-09  Score=79.75  Aligned_cols=156  Identities=13%  Similarity=0.053  Sum_probs=107.9

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCC----------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEc
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCF----------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINN   83 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~   83 (251)
                      |+|+||||.+|     ..+++++.+.+.                .+..+.+|+.|++++.+.+        .+.|.+|++
T Consensus         1 I~V~GatG~vG-----~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al--------~~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVG-----RALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAAL--------KGADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHH-----HHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHH--------TTSSEEEEC
T ss_pred             eEEECCCChHH-----HHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhh--------hhcchhhhh
Confidence            79999999999     777777765543                4566789999998888887        579999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC---------hhhHHhHH
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG---------TIYAATKG  154 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~---------~~Y~~sK~  154 (251)
                      +|... .        +             ...++.++..+++.+..++|++|+.......+..         ..|...|.
T Consensus        68 ~~~~~-~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   68 AGPPP-K--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             CHSTT-T--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhhc-c--------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            98654 1        0             4455666777788777899999998876654332         25666665


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ..+.+.       ...+++...++|+++..+......-...      .........+.+|+|+.++.++
T Consensus       126 ~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  126 EAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             HHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHh
Confidence            544333       2358999999999987775331100000      1111124567999999998876

...

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.00  E-value=1.8e-08  Score=84.15  Aligned_cols=156  Identities=21%  Similarity=0.233  Sum_probs=107.2

Q ss_pred             CEEEEecCCCCcC-----------------------cHHHHHHHHHHHH-------hcCCeeEEEeccCCCH------HH
Q 041276           18 MTALVTGGTKGLG-----------------------NEAELNECLREWK-------TKCFKVTGSVCDASSR------AE   61 (251)
Q Consensus        18 k~vlItGas~giG-----------------------~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~------~~   61 (251)
                      ++|++|||||-+|                       ++...+.+.+.+.       ....++.++..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            5799999999999                       1222333333333       2246899999999843      34


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL  141 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~  141 (251)
                      .+.+.        +.+|.||||+.......+        ..+....|+.|+..+++.+    ...+...+.+|||++...
T Consensus        81 ~~~La--------~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELA--------ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHh--------hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeecc
Confidence            44444        469999999997653222        4566778999998888775    344434599999977553


Q ss_pred             CC--------------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHH
Q 041276          142 ST--------------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFL  197 (251)
Q Consensus       142 ~~--------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~  197 (251)
                      ..                    .....|+.||.+.+-+++....    .|+++..+.||++-.+.........++.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~tG~~n~~D~~  212 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSRTGALNTRDFL  212 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCccCccccchHH
Confidence            21                    1225799999999998876544    4899999999999877664444444433

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.96  E-value=2.8e-08  Score=83.69  Aligned_cols=204  Identities=18%  Similarity=0.191  Sum_probs=128.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------------CeeEEEeccCCCHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------------FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ++.++|||||+|-+|     +.+.+.+.+.+                          ..+.++..|+.+...+...+   
T Consensus         3 ~~~~vlVtGG~GflG-----~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~---   74 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLG-----QHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF---   74 (361)
T ss_pred             cCCEEEEECCccHHH-----HHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc---
Confidence            568999999999999     77776666544                          23445556666666666665   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC------
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST------  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~------  143 (251)
                           .+. .++|+|.... +.    .-..+-+..+++|+.++.+++.++    ++.+-.++|++||..-..+.      
T Consensus        75 -----~~~-~Vvh~aa~~~-~~----~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~  139 (361)
T KOG1430|consen   75 -----QGA-VVVHCAASPV-PD----FVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIING  139 (361)
T ss_pred             -----cCc-eEEEeccccC-cc----ccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccC
Confidence                 456 7777776544 22    112246778999999998888887    66666789999997655432      


Q ss_pred             ------CCC--hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC---CCCC-----
Q 041276          144 ------NLG--TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR---TPME-----  207 (251)
Q Consensus       144 ------~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~-----  207 (251)
                            |..  ..|+.||+--+.+.+..+.   ..+..-.++.|-.+..|--+...+.  ..+.....   ...+     
T Consensus       140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~--i~~~~~~g~~~f~~g~~~~~  214 (361)
T KOG1430|consen  140 DESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPK--IVEALKNGGFLFKIGDGENL  214 (361)
T ss_pred             CCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHH--HHHHHHccCceEEeeccccc
Confidence                  222  4899999988888875554   3567778888988888766554322  11111111   1111     


Q ss_pred             -CCCCHHHHHHH--HH-HHcCCCCCCccccEEEeCCCccccccc
Q 041276          208 -RPGEPKEVSSL--VA-FLCMPAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       208 -~~~~~~dva~~--~~-~l~~~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                       .+...+-++.+  +. ..+.+.+...+||...++.|...+-.+
T Consensus       215 ~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~  258 (361)
T KOG1430|consen  215 NDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFD  258 (361)
T ss_pred             cceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhH
Confidence             11112212222  11 122236778899999999887765443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.93  E-value=5.3e-08  Score=80.77  Aligned_cols=202  Identities=16%  Similarity=0.102  Sum_probs=111.9

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHH-----HHH-HHHHHhcCCCccEEEEcccCCCCCCCC
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE-----KLM-KQVSSLFNGKLNILINNVGTNYTTKPT   93 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-----~~~-~~i~~~~~~~id~lv~~ag~~~~~~~~   93 (251)
                      ||||||+|.||     ..+++.+.+.+.++..+.-+........     ... ....+.+ .++|.|||+|+.....   
T Consensus         1 vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~Vvh~a~~~~~~---   71 (292)
T TIGR01777         1 ILITGGTGFIG-----RALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEAL-EGADAVINLAGEPIAD---   71 (292)
T ss_pred             CEEEcccchhh-----HHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhc-CCCCEEEECCCCCccc---
Confidence            69999999999     8899999888777665543322211100     000 1223344 5799999999964311   


Q ss_pred             CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-c-eEEEecccccccCC----------C-CChhhHHhHHHHHHHH
Q 041276           94 VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-G-NIILVSSVCGVLST----------N-LGTIYAATKGAMNQLA  160 (251)
Q Consensus        94 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g-~iv~vss~~~~~~~----------~-~~~~Y~~sK~a~~~~~  160 (251)
                      .....+.....+++|+.++..+++++    ++.+. . .+++.|+...+...          + ....|...+...+...
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~  147 (292)
T TIGR01777        72 KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAA  147 (292)
T ss_pred             ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHh
Confidence            12344556778889999988888776    44432 2 34444443211100          0 1112333333333332


Q ss_pred             HHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh--------CCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC--------RTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       161 ~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      +    .+.+.++.+..+.|+.+..+... ..  .........        ......+...+|+|+.+..++....  ..|
T Consensus       148 ~----~~~~~~~~~~ilR~~~v~G~~~~-~~--~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~--~~g  218 (292)
T TIGR01777       148 Q----AAEDLGTRVVLLRTGIVLGPKGG-AL--AKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENAS--ISG  218 (292)
T ss_pred             h----hchhcCCceEEEeeeeEECCCcc-hh--HHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcc--cCC
Confidence            2    22345799999999999877421 11  111111110        0111245679999999999985422  234


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                       .+.+.++..++
T Consensus       219 -~~~~~~~~~~s  229 (292)
T TIGR01777       219 -PVNATAPEPVR  229 (292)
T ss_pred             -ceEecCCCccC
Confidence             56666655443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.85  E-value=1.7e-08  Score=82.15  Aligned_cols=119  Identities=14%  Similarity=0.143  Sum_probs=70.9

Q ss_pred             CCeeEEEeccCCCHH------HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHH
Q 041276           46 CFKVTGSVCDASSRA------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA  119 (251)
Q Consensus        46 ~~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  119 (251)
                      ..+++++..|++++.      ..+.+.        ..+|+|||||+......        .+++..++|+.|+..+++.+
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~--------~~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la  122 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELA--------EEVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLA  122 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHH--------HH--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHH
T ss_pred             hccEEEEeccccccccCCChHHhhccc--------cccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHH
Confidence            468999999999753      344443        36999999999765222        23447789999999999887


Q ss_pred             HHHHHhCCCceEEEecccccc--cC------------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEec
Q 041276          120 HPLLKASGAGNIILVSSVCGV--LS------------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP  179 (251)
Q Consensus       120 ~~~m~~~~~g~iv~vss~~~~--~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~p  179 (251)
                          .+.+..+++++||....  ..                  ......|..||...+.+++..+.+   .|+.+..+.|
T Consensus       123 ----~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp  195 (249)
T PF07993_consen  123 ----AQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRP  195 (249)
T ss_dssp             ----TSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE
T ss_pred             ----HhccCcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEec
Confidence                33333489999983211  11                  012247999999999999988765   5788999999


Q ss_pred             CcccCCCC
Q 041276          180 WFITTPLT  187 (251)
Q Consensus       180 G~v~t~~~  187 (251)
                      |.+-....
T Consensus       196 ~~i~g~~~  203 (249)
T PF07993_consen  196 GIIVGDSR  203 (249)
T ss_dssp             -EEE-SSS
T ss_pred             CcccccCC
Confidence            98877433

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.80  E-value=2.9e-07  Score=76.36  Aligned_cols=179  Identities=9%  Similarity=0.030  Sum_probs=105.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE---------------EEeccCCCHHHHHHHHHHHHHhcCCC-ccEEEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVT---------------GSVCDASSRAEREKLMKQVSSLFNGK-LNILIN   82 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~---------------~~~~D~~~~~~~~~~~~~i~~~~~~~-id~lv~   82 (251)
                      +|+||||||.+|     ..+++.|.+.+.++.               .+.+|+.|++++..+++.. +.. .. +|.+++
T Consensus         1 ~ilVtGatG~iG-----~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~-~~~-~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTA-----SRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSD-DGM-EPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHH-----HHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcc-cCc-CCceeEEEE
Confidence            389999999999     777777776654332               4578999999999888653 222 35 999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHH
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN  162 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~  162 (251)
                      +++...  .      .  .+            ..+.++..+++.+-.+||++||.....+.+       .+...+.+.+ 
T Consensus        74 ~~~~~~--~------~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~l~-  123 (285)
T TIGR03649        74 VAPPIP--D------L--AP------------PMIKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAHLD-  123 (285)
T ss_pred             eCCCCC--C------h--hH------------HHHHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHHHH-
Confidence            887421  0      0  00            112344455777667999999865433211       2222222221 


Q ss_pred             HHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH--HHhh--CCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          163 LACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE--EVKC--RTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       163 la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                         +  ..|+....+.|+++..++....... ....  .+..  ......+.+++|+|+.+..++.....  .|+.+.+.
T Consensus       124 ---~--~~gi~~tilRp~~f~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~~~~l~  195 (285)
T TIGR03649       124 ---S--LGGVEYTVLRPTWFMENFSEEFHVE-AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVA--PNTDYVVL  195 (285)
T ss_pred             ---h--ccCCCEEEEeccHHhhhhccccccc-ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc--CCCeEEee
Confidence               1  1388999999998876543221100 0000  0000  00112467899999999998865322  35566666


Q ss_pred             CCcc
Q 041276          239 GGFT  242 (251)
Q Consensus       239 gG~~  242 (251)
                      |+..
T Consensus       196 g~~~  199 (285)
T TIGR03649       196 GPEL  199 (285)
T ss_pred             CCcc
Confidence            6543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12320 hypothetical protein; Provisional

Probab=98.78  E-value=7.1e-07  Score=81.82  Aligned_cols=172  Identities=13%  Similarity=0.092  Sum_probs=104.6

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCee---------------EEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKV---------------TGSVCDASSRAEREKLMKQVSSLFNGKLNILINN   83 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~---------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~   83 (251)
                      +||||||+|.||     ..+++.+.+.+.++               .++..|++++. +.+++        .++|.|||+
T Consensus         2 kILVTGAaGFIG-----s~La~~Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al--------~~~D~VIHL   67 (699)
T PRK12320          2 QILVTDATGAVG-----RSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELA--------GEADAVIHL   67 (699)
T ss_pred             EEEEECCCCHHH-----HHHHHHHHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHh--------cCCCEEEEc
Confidence            699999999999     78888887665443               35567777763 33332        469999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHH
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNL  163 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (251)
                      |+... ..            ...+|+.++.++++++    ++.+ .++|++||..+.   +  ..|.    ..+.+.   
T Consensus        68 Aa~~~-~~------------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G~---~--~~~~----~aE~ll---  117 (699)
T PRK12320         68 APVDT-SA------------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAGR---P--ELYR----QAETLV---  117 (699)
T ss_pred             CccCc-cc------------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCCC---C--cccc----HHHHHH---
Confidence            98642 11            1147888888888876    4444 489999876431   1  1132    122222   


Q ss_pred             HHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCC---CCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMER---PGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       164 a~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                       .   ..++.+..+.|..+..+.....  ...+...+......+.   +...+|++++++.++...   .+| .+++.+|
T Consensus       118 -~---~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~---~~G-iyNIG~~  187 (699)
T PRK12320        118 -S---TGWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD---RNG-VVDLATP  187 (699)
T ss_pred             -H---hcCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC---CCC-EEEEeCC
Confidence             1   1346777788888877733211  1112222211111111   247899999998888532   245 8899888


Q ss_pred             cccc
Q 041276          241 FTVN  244 (251)
Q Consensus       241 ~~~~  244 (251)
                      ..++
T Consensus       188 ~~~S  191 (699)
T PRK12320        188 DTTN  191 (699)
T ss_pred             CeeE
Confidence            6553

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.71  E-value=5.5e-08  Score=77.82  Aligned_cols=90  Identities=16%  Similarity=0.108  Sum_probs=71.7

Q ss_pred             CEEEEecC-CCCcCcHHHHHHHHHHHHhcCCeeEEE------------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcc
Q 041276           18 MTALVTGG-TKGLGNEAELNECLREWKTKCFKVTGS------------VCDASSRAEREKLMKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        18 k~vlItGa-s~giG~~~~~~~~~~~~~~~~~~~~~~------------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~a   84 (251)
                      .+=.||.. |||||     .++++.+.+.|.++..+            .+|+++.++++++++.+.+.+ +++|++||||
T Consensus        15 ~VR~itN~SSGgIG-----~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~-g~iDiLVnnA   88 (227)
T TIGR02114        15 SVRSITNHSTGHLG-----KIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELV-QEHDILIHSM   88 (227)
T ss_pred             CceeecCCcccHHH-----HHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence            45566665 67899     88899998888776653            368899999999999999999 8999999999


Q ss_pred             cCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHH
Q 041276           85 GTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ  117 (251)
Q Consensus        85 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  117 (251)
                      |+.. ..++.+.+.++|++++.   .+.+.+.+
T Consensus        89 gv~d-~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        89 AVSD-YTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             Eecc-ccchhhCCHHHHhhhcc---hhhhhccc
Confidence            9865 66788899999998754   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.68  E-value=7.6e-07  Score=71.51  Aligned_cols=192  Identities=14%  Similarity=0.137  Sum_probs=112.1

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH----HHHHHHHhcCCCccEEEEcccCCCCCCCCCC
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREK----LMKQVSSLFNGKLNILINNVGTNYTTKPTVE   95 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~   95 (251)
                      |+||||||-||     ..+...+...++++..+.-+....+....    ..+.+.......+|+|||.||..-..+   .
T Consensus         1 IliTGgTGlIG-----~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~r---r   72 (297)
T COG1090           1 ILITGGTGLIG-----RALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAER---R   72 (297)
T ss_pred             CeEeccccchh-----HHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccc---c
Confidence            68999999999     99999999999998887655543332211    233333333126999999999653111   1


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH----hHHHHHHHHHHHHHHH---
Q 041276           96 YMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA----TKGAMNQLAKNLACEW---  167 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~----sK~a~~~~~~~la~e~---  167 (251)
                      -+.+.=+..++    +.+..++.+.....+.+ .+++.+-+|..|+.+......|.=    ..-.+..+|+.+-.+-   
T Consensus        73 Wt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a  148 (297)
T COG1090          73 WTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA  148 (297)
T ss_pred             CCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence            33443344444    44455555555555332 356666667777776543322221    1234555665554443   


Q ss_pred             ccCCeEEEEEecCcccCCCC---CCCCCCHHHHHHHhhCCCCC----CCCCHHHHHHHHHHHcCC
Q 041276          168 ARDNIRINSVAPWFITTPLT---EPYLSDEKFLEEVKCRTPME----RPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       168 ~~~~i~v~~i~pG~v~t~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~dva~~~~~l~~~  225 (251)
                      ...|+||..+.-|.|..+-.   ..+.+.  +.-....+.-.+    .+...||..+.+.|++..
T Consensus       149 ~~~gtRvvllRtGvVLs~~GGaL~~m~~~--fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~  211 (297)
T COG1090         149 QQLGTRVVLLRTGVVLSPDGGALGKMLPL--FKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLEN  211 (297)
T ss_pred             hhcCceEEEEEEEEEecCCCcchhhhcch--hhhccCCccCCCCceeeeeeHHHHHHHHHHHHhC
Confidence            34689999999998877532   222111  000000111111    345689999999999964

>PLN00016 RNA-binding protein; Provisional

Probab=98.66  E-value=4.2e-06  Score=72.32  Aligned_cols=186  Identities=16%  Similarity=0.183  Sum_probs=109.0

Q ss_pred             CCCCEEEEe----cCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHH-----------------------HHHHHHH
Q 041276           15 LQGMTALVT----GGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRA-----------------------EREKLMK   67 (251)
Q Consensus        15 l~~k~vlIt----Gas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------------------~~~~~~~   67 (251)
                      ...++||||    ||+|.||     ..+++.|.+.|.++..+.-+.....                       .+.. ++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG-----~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~  123 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIG-----FYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD-VK  123 (378)
T ss_pred             cccceEEEEeccCCCceeEh-----HHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH-HH
Confidence            345789999    9999999     8888888877776665543321100                       0111 12


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC--
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL--  145 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--  145 (251)
                      .+...  .++|+|||+++..          .           .+    ++.++..+++.+..++|++||...+.....  
T Consensus       124 ~~~~~--~~~d~Vi~~~~~~----------~-----------~~----~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p  176 (378)
T PLN00016        124 SKVAG--AGFDVVYDNNGKD----------L-----------DE----VEPVADWAKSPGLKQFLFCSSAGVYKKSDEPP  176 (378)
T ss_pred             hhhcc--CCccEEEeCCCCC----------H-----------HH----HHHHHHHHHHcCCCEEEEEccHhhcCCCCCCC
Confidence            22211  4699999987621          1           11    223444456666679999999765432111  


Q ss_pred             ------ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC---------CCCC
Q 041276          146 ------GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM---------ERPG  210 (251)
Q Consensus       146 ------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  210 (251)
                            ...+. +|...+.+.+       ..++.+..+.|+.+..+...... ...+...+....+.         ..+.
T Consensus       177 ~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~~~~~~~i~~~g~g~~~~~~i  247 (378)
T PLN00016        177 HVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDRLVRGRPVPIPGSGIQLTQLG  247 (378)
T ss_pred             CCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCch-HHHHHHHHHcCCceeecCCCCeeecee
Confidence                  01112 6877776543       24788999999999887543210 11122222222111         1245


Q ss_pred             CHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ..+|+|++++.++...  ...|+.+.+.++..++
T Consensus       248 ~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s  279 (378)
T PLN00016        248 HVKDLASMFALVVGNP--KAAGQIFNIVSDRAVT  279 (378)
T ss_pred             cHHHHHHHHHHHhcCc--cccCCEEEecCCCccC
Confidence            6899999999888543  2357889988875443

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.63  E-value=1.1e-06  Score=79.50  Aligned_cols=73  Identities=15%  Similarity=0.199  Sum_probs=50.9

Q ss_pred             CeeEEEeccCCCHH------HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH
Q 041276           47 FKVTGSVCDASSRA------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH  120 (251)
Q Consensus        47 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  120 (251)
                      .++.++..|+++++      ..+.+.        ..+|+|||+|+... .       .+..+..+++|+.++..+++.+.
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~-f-------~~~~~~a~~vNV~GT~nLLelA~  255 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTT-F-------DERYDVAIDINTRGPCHLMSFAK  255 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHH--------hcCCEEEECccccc-c-------ccCHHHHHHHHHHHHHHHHHHHH
Confidence            36888999999872      333333        36999999999754 1       13467789999999999998874


Q ss_pred             HHHHhCCCceEEEecccc
Q 041276          121 PLLKASGAGNIILVSSVC  138 (251)
Q Consensus       121 ~~m~~~~~g~iv~vss~~  138 (251)
                      ..   ....++|++||..
T Consensus       256 ~~---~~lk~fV~vSTay  270 (605)
T PLN02503        256 KC---KKLKLFLQVSTAY  270 (605)
T ss_pred             Hc---CCCCeEEEccCce
Confidence            32   1234688888754

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.49  E-value=3.9e-06  Score=67.66  Aligned_cols=190  Identities=13%  Similarity=0.076  Sum_probs=119.0

Q ss_pred             CcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC------------------CHHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS------------------SRAEREKLMKQVSS   71 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~------------------~~~~~~~~~~~i~~   71 (251)
                      .+.+..++++++||||.|.||     ..++++|...++.++...--.+                  --+-+..++     
T Consensus        20 ~~~~p~~~lrI~itGgaGFIg-----SHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~-----   89 (350)
T KOG1429|consen   20 EQVKPSQNLRILITGGAGFIG-----SHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLL-----   89 (350)
T ss_pred             hcccCCCCcEEEEecCcchHH-----HHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHH-----
Confidence            345677889999999999999     8999999998877765421111                  112223333     


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc----------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL----------  141 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~----------  141 (251)
                         ..+|.++|.|....+.... ..    -.+.+..|+.++++.+..+.+.     ..|+++.|+..-+-          
T Consensus        90 ---~evD~IyhLAapasp~~y~-~n----pvktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~  156 (350)
T KOG1429|consen   90 ---KEVDQIYHLAAPASPPHYK-YN----PVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVET  156 (350)
T ss_pred             ---HHhhhhhhhccCCCCcccc-cC----ccceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCccc
Confidence               3589999999887633321 11    1356778999998888776332     26777776643321          


Q ss_pred             ------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--CCCHHHHHHHhhCCCC-------
Q 041276          142 ------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--LSDEKFLEEVKCRTPM-------  206 (251)
Q Consensus       142 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~-------  206 (251)
                            +......|.-.|.+.+.|+..+.++   .||.|....+-.+..|...-.  ..-..+..+.....|+       
T Consensus       157 ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~  233 (350)
T KOG1429|consen  157 YWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGK  233 (350)
T ss_pred             cccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCc
Confidence                  1223468999999999999987776   677776666655555533211  0112233333323232       


Q ss_pred             --CCCCCHHHHHHHHHHHcCC
Q 041276          207 --ERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       207 --~~~~~~~dva~~~~~l~~~  225 (251)
                        ..++-..|+.+.++.|...
T Consensus       234 qtRSF~yvsD~Vegll~Lm~s  254 (350)
T KOG1429|consen  234 QTRSFQYVSDLVEGLLRLMES  254 (350)
T ss_pred             ceEEEEeHHHHHHHHHHHhcC
Confidence              2334577888888877743

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.33  E-value=2.8e-05  Score=59.80  Aligned_cols=153  Identities=20%  Similarity=0.115  Sum_probs=91.5

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      ++++||||| |+|                   +.+..+.+...+.. ...+.++.+|++|++++.++++.+.+.+ +++|
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id   77 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD   77 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence            469999998 666                   23333333333332 3467788899999999999999999988 7999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      ++|+.+-...                       +-.+..++-..-.+.+.-+++.+-...+..+                
T Consensus        78 ~lv~~vh~~~-----------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~----------------  118 (177)
T PRK08309         78 LAVAWIHSSA-----------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP----------------  118 (177)
T ss_pred             EEEEeccccc-----------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch----------------
Confidence            9998776543                       1122223222212222236887653333111                


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC-CCCCcccc
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP-AASYITGQ  233 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~  233 (251)
                        +..+..+...+....-|..|++..+-..                   |+.+=+||++.++.-+.. ...++-|+
T Consensus       119 --~~~~~~~~~~~~~~~~i~lgf~~~~~~~-------------------rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 --RIPSEKIGPARCSYRRVILGFVLEDTYS-------------------RWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             --hhhhhhhhhcCCceEEEEEeEEEeCCcc-------------------ccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence              1122333334566777888988765433                   455677787777776653 33444553

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.30  E-value=1.4e-06  Score=70.12  Aligned_cols=145  Identities=15%  Similarity=0.062  Sum_probs=99.4

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc----------------------------CCeeEEEeccCCCHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK----------------------------CFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~----------------------------~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +|++||||-+|-=|     .-+++.|.+.                            ..+++.+..|++|..++.+++++
T Consensus         2 ~K~ALITGITGQDG-----sYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~   76 (345)
T COG1089           2 GKVALITGITGQDG-----SYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE   76 (345)
T ss_pred             CceEEEecccCCch-----HHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHh
Confidence            69999999999999     3333333332                            23467788999999999999987


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc--------
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV--------  140 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~--------  140 (251)
                      +      .+|-|+|.++.....     .+.++-....+++..|++.++.+..-+-  .+..++..-||..-+        
T Consensus        77 v------~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq  143 (345)
T COG1089          77 V------QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQ  143 (345)
T ss_pred             c------Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCcc
Confidence            5      899999999876533     3334445678889999999888763222  112455554443211        


Q ss_pred             ---cCCCCChhhHHhHHHHHHHHHHHHHHHc---cCCeEEEEEec
Q 041276          141 ---LSTNLGTIYAATKGAMNQLAKNLACEWA---RDNIRINSVAP  179 (251)
Q Consensus       141 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~p  179 (251)
                         -|+.+.+.|+++|....-++..++..+.   ..||-+|.=+|
T Consensus       144 ~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP  188 (345)
T COG1089         144 KETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP  188 (345)
T ss_pred             ccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC
Confidence               1344578999999999888888877653   34566665444

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.27  E-value=9.9e-05  Score=57.79  Aligned_cols=186  Identities=15%  Similarity=0.121  Sum_probs=109.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC---eeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF---KVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~---~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      |+++|||++|-.|     .++.+.+++++.   +..+.   .+|+++..+.+++|+.      .++-.+||.|.....-.
T Consensus         2 ~kIlVtGg~GLVG-----sAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~------ekPthVIhlAAmVGGlf   70 (315)
T KOG1431|consen    2 KKILVTGGTGLVG-----SAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFES------EKPTHVIHLAAMVGGLF   70 (315)
T ss_pred             ceEEEecCCchHH-----HHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhc------cCCceeeehHhhhcchh
Confidence            7899999999999     666666766542   34443   6999999999999987      58889999886542111


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc----------------cCCCCChhhHHhHHH
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV----------------LSTNLGTIYAATKGA  155 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~----------------~~~~~~~~Y~~sK~a  155 (251)
                      .......+-|+..+.+|    -++++.+..+-.    -++++..|..-+                -+.+....|+-+|.-
T Consensus        71 ~N~~ynldF~r~Nl~in----dNVlhsa~e~gv----~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~  142 (315)
T KOG1431|consen   71 HNNTYNLDFIRKNLQIN----DNVLHSAHEHGV----KKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRM  142 (315)
T ss_pred             hcCCCchHHHhhcceec----hhHHHHHHHhch----hhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHH
Confidence            22234455555544443    334444433322    223332221100                012334579999987


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----HHHHHHH--------------hhCCCCCCCCCHHHHHH
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----EKFLEEV--------------KCRTPMERPGEPKEVSS  217 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~~~~--------------~~~~~~~~~~~~~dva~  217 (251)
                      +.-..+.++++++.   ...++.|-.+-.|--.--...    +.++..+              ....|+..+...+|.|+
T Consensus       143 idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~  219 (315)
T KOG1431|consen  143 IDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLAD  219 (315)
T ss_pred             HHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHH
Confidence            77777888888543   445555655544422111111    1111111              12345556667899999


Q ss_pred             HHHHHcCC
Q 041276          218 LVAFLCMP  225 (251)
Q Consensus       218 ~~~~l~~~  225 (251)
                      +++|++.+
T Consensus       220 l~i~vlr~  227 (315)
T KOG1431|consen  220 LFIWVLRE  227 (315)
T ss_pred             HHHHHHHh
Confidence            99999964

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.11  E-value=1.9e-05  Score=68.75  Aligned_cols=108  Identities=25%  Similarity=0.242  Sum_probs=72.1

Q ss_pred             CCCCCEEEEecCCCCcC---------------------------------cHHHHHHHHHHHHhc----CCeeEEEeccC
Q 041276           14 SLQGMTALVTGGTKGLG---------------------------------NEAELNECLREWKTK----CFKVTGSVCDA   56 (251)
Q Consensus        14 ~l~~k~vlItGas~giG---------------------------------~~~~~~~~~~~~~~~----~~~~~~~~~D~   56 (251)
                      -+++|+|+||||+|.+|                                 .....+.+.+.+++.    -.++..+..|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            36899999999999999                                 111122333344433    23677778888


Q ss_pred             CCHH------HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCce
Q 041276           57 SSRA------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGN  130 (251)
Q Consensus        57 ~~~~------~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~  130 (251)
                      ++++      ..+.+.        ..+|+++|+|+... .       .|.++..+.+|..|+..+++.+.....-   -.
T Consensus        89 ~~~~LGis~~D~~~l~--------~eV~ivih~AAtvr-F-------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~  149 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLA--------DEVNIVIHSAATVR-F-------DEPLDVALGINTRGTRNVLQLAKEMVKL---KA  149 (467)
T ss_pred             cCcccCCChHHHHHHH--------hcCCEEEEeeeeec-c-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---he
Confidence            7654      222222        47999999999654 1       3567889999999999999887554432   35


Q ss_pred             EEEecccccc
Q 041276          131 IILVSSVCGV  140 (251)
Q Consensus       131 iv~vss~~~~  140 (251)
                      ++.+|..-..
T Consensus       150 ~vhVSTAy~n  159 (467)
T KOG1221|consen  150 LVHVSTAYSN  159 (467)
T ss_pred             EEEeehhhee
Confidence            7777764433

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.09  E-value=1.6e-05  Score=68.78  Aligned_cols=67  Identities=22%  Similarity=0.226  Sum_probs=52.9

Q ss_pred             cCCCCCEEEEecC---------------CCC-cCcHHHHHHHHHHHHhcCCeeEEE-------------eccCCCHHHHH
Q 041276           13 WSLQGMTALVTGG---------------TKG-LGNEAELNECLREWKTKCFKVTGS-------------VCDASSRAERE   63 (251)
Q Consensus        13 ~~l~~k~vlItGa---------------s~g-iG~~~~~~~~~~~~~~~~~~~~~~-------------~~D~~~~~~~~   63 (251)
                      .+++||+||||||               |+| +|     .++++.+...|.++..+             .+|+++.+++.
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G-----~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~  258 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMG-----YALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEML  258 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHH-----HHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHH
Confidence            3589999999999               555 89     88999999888777543             46777777766


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCC
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~~   88 (251)
                      +.++   +.+ +++|++|+|||+..
T Consensus       259 ~~v~---~~~-~~~DilI~~Aav~d  279 (399)
T PRK05579        259 DAVL---AAL-PQADIFIMAAAVAD  279 (399)
T ss_pred             HHHH---Hhc-CCCCEEEEcccccc
Confidence            6654   556 78999999999854

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.98  E-value=2.2e-05  Score=74.06  Aligned_cols=146  Identities=14%  Similarity=0.222  Sum_probs=119.9

Q ss_pred             CCCCEEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      -..|..+|+||-||.|                       +.-=-....+..++.|..+.+-..|++..+..+.++++..+
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence            3568999999999999                       11111245677778888898999999999999999988755


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      -  +.+..++|.|.+.. ...+++.+++++++.-+-.+.++.++-+.-....-.-  ..+|.+||+..-+++.+...|+.
T Consensus      1846 l--~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L--dyFv~FSSvscGRGN~GQtNYG~ 1920 (2376)
T KOG1202|consen 1846 L--GPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL--DYFVVFSSVSCGRGNAGQTNYGL 1920 (2376)
T ss_pred             c--ccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc--ceEEEEEeecccCCCCcccccch
Confidence            4  78999999999886 7788899999999999999999998876654433222  47999999999999999999999


Q ss_pred             hHHHHHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLAC  165 (251)
Q Consensus       152 sK~a~~~~~~~la~  165 (251)
                      +.++++-+|..-+.
T Consensus      1921 aNS~MERiceqRr~ 1934 (2376)
T KOG1202|consen 1921 ANSAMERICEQRRH 1934 (2376)
T ss_pred             hhHHHHHHHHHhhh
Confidence            99999999986443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.88  E-value=0.00058  Score=55.45  Aligned_cols=190  Identities=20%  Similarity=0.171  Sum_probs=120.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------CeeEEEeccCCCHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------FKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      ..++.|-++-|.||||.+|     .-+.+++...|                       +++.+...|+.|++++++.++ 
T Consensus        56 RsS~sGiVaTVFGAtGFlG-----ryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-  129 (391)
T KOG2865|consen   56 RSSVSGIVATVFGATGFLG-----RYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-  129 (391)
T ss_pred             cccccceEEEEeccccccc-----HHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-
Confidence            4457888999999999999     66666665443                       356788999999999999994 


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                             .-+++||..|...+...+.         .-++|+.++-.+++.+    ++.+--++|.+|+..+..  ...+-
T Consensus       130 -------~sNVVINLIGrd~eTknf~---------f~Dvn~~~aerlAric----ke~GVerfIhvS~Lganv--~s~Sr  187 (391)
T KOG2865|consen  130 -------HSNVVINLIGRDYETKNFS---------FEDVNVHIAERLARIC----KEAGVERFIHVSCLGANV--KSPSR  187 (391)
T ss_pred             -------hCcEEEEeeccccccCCcc---------cccccchHHHHHHHHH----HhhChhheeehhhccccc--cChHH
Confidence                   5789999999765333322         1346777777777766    666556899999987542  23345


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCC--------CCHHHHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP--------GEPKEVSSLVA  220 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~dva~~~~  220 (251)
                      |--||++-+--.+   .++..    ...|.|..+...--+-......+|..+. -+|+...        .-+-|||.+|+
T Consensus       188 ~LrsK~~gE~aVr---dafPe----AtIirPa~iyG~eDrfln~ya~~~rk~~-~~pL~~~GekT~K~PVyV~DVaa~Iv  259 (391)
T KOG2865|consen  188 MLRSKAAGEEAVR---DAFPE----ATIIRPADIYGTEDRFLNYYASFWRKFG-FLPLIGKGEKTVKQPVYVVDVAAAIV  259 (391)
T ss_pred             HHHhhhhhHHHHH---hhCCc----ceeechhhhcccchhHHHHHHHHHHhcC-ceeeecCCcceeeccEEEehHHHHHH
Confidence            6667766654443   23222    4557776654432221111122333221 1232222        23679999999


Q ss_pred             HHcCCCCCCccccEEEeCC
Q 041276          221 FLCMPAASYITGQTICVDG  239 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdg  239 (251)
                      ..+.+.++  .|.+...-|
T Consensus       260 nAvkDp~s--~Gktye~vG  276 (391)
T KOG2865|consen  260 NAVKDPDS--MGKTYEFVG  276 (391)
T ss_pred             HhccCccc--cCceeeecC
Confidence            88876643  577665543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.86  E-value=2.3e-05  Score=63.01  Aligned_cols=181  Identities=18%  Similarity=0.210  Sum_probs=97.3

Q ss_pred             EEEecCCCCcCcH-----------------HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEE
Q 041276           20 ALVTGGTKGLGNE-----------------AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILIN   82 (251)
Q Consensus        20 vlItGas~giG~~-----------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~   82 (251)
                      |+|+||+|.+|..                 ..-....++++..|  +.++..|..|++++.+++        .++|.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g--~~vv~~d~~~~~~l~~al--------~g~d~v~~   70 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALG--AEVVEADYDDPESLVAAL--------KGVDAVFS   70 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTT--TEEEES-TT-HHHHHHHH--------TTCSEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhccc--ceEeecccCCHHHHHHHH--------cCCceEEe
Confidence            7999999999910                 00112233344443  345688998888888888        58999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-C-CC--ChhhHHhHHHHHH
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-T-NL--GTIYAATKGAMNQ  158 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-~-~~--~~~Y~~sK~a~~~  158 (251)
                      +.+... ..                -......+++++    ++.+-.++|+ ||...... . ..  ...+-..|..++.
T Consensus        71 ~~~~~~-~~----------------~~~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   71 VTPPSH-PS----------------ELEQQKNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             ESSCSC-CC----------------HHHHHHHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred             ecCcch-hh----------------hhhhhhhHHHhh----hccccceEEE-EEecccccccccccccchhhhhhhhhhh
Confidence            888653 11                122223344444    4444457775 54433332 1 11  1223345665554


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---CHHHHHHHhhCCCCC---CC-CCHHHHHHHHHHHcCCCCCCcc
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---DEKFLEEVKCRTPME---RP-GEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~---~~-~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +.+.       .++....|.||.........+..   .......+.-..+..   .+ .+.+|+++.+..++.+...+-+
T Consensus       129 ~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~  201 (233)
T PF05368_consen  129 YLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNN  201 (233)
T ss_dssp             HHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTE
T ss_pred             hhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcC
Confidence            4432       38888999999775543321110   000000000001111   22 3679999999999987655547


Q ss_pred             ccEEEeCC
Q 041276          232 GQTICVDG  239 (251)
Q Consensus       232 G~~i~vdg  239 (251)
                      |..+.+.|
T Consensus       202 ~~~~~~~~  209 (233)
T PF05368_consen  202 GKTIFLAG  209 (233)
T ss_dssp             EEEEEEGG
T ss_pred             CEEEEeCC
Confidence            88888765

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.84  E-value=0.001  Score=59.43  Aligned_cols=224  Identities=13%  Similarity=0.078  Sum_probs=128.8

Q ss_pred             cccCCCCCEEEEecCCC-CcC---------------------cHHHHHHHHHHHHh----cCCeeEEEeccCCCHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTK-GLG---------------------NEAELNECLREWKT----KCFKVTGSVCDASSRAEREK   64 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~-giG---------------------~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~   64 (251)
                      +.-...+|++|||||+. .||                     +.+ ..+..+.+-.    .+..+.++.+++++...++.
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~-r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEE-RTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHH-HHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            45567899999999984 466                     111 1233333332    25567788999999999999


Q ss_pred             HHHHHHHhc-------------CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC---CC
Q 041276           65 LMKQVSSLF-------------NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS---GA  128 (251)
Q Consensus        65 ~~~~i~~~~-------------~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---~~  128 (251)
                      +++.|-..-             .-.+|.+|--|.... .+.+.+... .-+..+++-+|....++-.+.+.--.+   .+
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r~v~~R  546 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSRGVDTR  546 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCc-cCccccCCc-hHHHHHHHHHHHHHHHHHHhhhhccccCcccc
Confidence            999984422             013677776666554 344444333 234445555555555554443322222   12


Q ss_pred             ceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHH--ccCCeEEEEEecCcccCC-CCCCCCCCHHHHHHHhhCCC
Q 041276          129 GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW--ARDNIRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTP  205 (251)
Q Consensus       129 g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~  205 (251)
                      -++|.-.|...-. +.+.+.|+-||++++.+..-+..|-  +. -+.+..-.-||++.- +..   .+.-....+ ++.-
T Consensus       547 ~hVVLPgSPNrG~-FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg---~Ndiiv~ai-Ek~G  620 (866)
T COG4982         547 LHVVLPGSPNRGM-FGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMG---HNDIIVAAI-EKAG  620 (866)
T ss_pred             eEEEecCCCCCCc-cCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccC---CcchhHHHH-HHhC
Confidence            4677766654322 3356789999999999988666653  11 133333345777653 221   122222222 2222


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCc-cc--cEEEeCCCcccc
Q 041276          206 MERPGEPKEVSSLVAFLCMPAASYI-TG--QTICVDGGFTVN  244 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~~~~~-~G--~~i~vdgG~~~~  244 (251)
                      . +.-+++|+|..++.||+.+.... -.  -..+++||+...
T Consensus       621 V-~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         621 V-RTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             c-eecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            2 33489999999999998653211 12  244677887654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.80  E-value=8.5e-05  Score=64.10  Aligned_cols=95  Identities=19%  Similarity=0.219  Sum_probs=64.7

Q ss_pred             CCCCCEEEEecC---------------CCC-cCcHHHHHHHHHHHHhcCCeeEEE-------------eccCCCHHHH-H
Q 041276           14 SLQGMTALVTGG---------------TKG-LGNEAELNECLREWKTKCFKVTGS-------------VCDASSRAER-E   63 (251)
Q Consensus        14 ~l~~k~vlItGa---------------s~g-iG~~~~~~~~~~~~~~~~~~~~~~-------------~~D~~~~~~~-~   63 (251)
                      +++||+||||||               ||| +|     ..+++.+...|.++.++             ..|+++.+++ +
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g-----~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~  256 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMG-----LALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLE  256 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHH-----HHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHH
Confidence            588999999999               677 99     88999999888776653             3677788777 5


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHH---HHHHHhhhHHHHHHHHHH
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL---SFLMSTNFESAYHLSQLA  119 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~  119 (251)
                      +++++   .+ +++|++|+|||+.. ..+... ....+   ...+.+|+...--+++.+
T Consensus       257 ~~~~~---~~-~~~D~~i~~Aavsd-~~~~~~-~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       257 AALNE---LA-KDFDIFISAAAVAD-FKPKTV-FEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             HHHHh---hc-ccCCEEEEcccccc-cccccc-ccccccccCCceeEEEEeCcHHHHHH
Confidence            55534   24 68999999999864 222211 11111   123456777666666554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.61  E-value=0.00023  Score=57.07  Aligned_cols=88  Identities=16%  Similarity=0.143  Sum_probs=63.0

Q ss_pred             CEEEEecCCCC-cCcHHHHHHHHHHHHhcCCeeEEEeccCC------------CHHHHHHHHHHHHHhcCCCccEEEEcc
Q 041276           18 MTALVTGGTKG-LGNEAELNECLREWKTKCFKVTGSVCDAS------------SRAEREKLMKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        18 k~vlItGas~g-iG~~~~~~~~~~~~~~~~~~~~~~~~D~~------------~~~~~~~~~~~i~~~~~~~id~lv~~a   84 (251)
                      .+-.||+.|+| ||     .++++.+...|.++..+..+..            ..++.+++.+.+.+.+ +++|++||+|
T Consensus        16 ~VR~itN~SSG~iG-----~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~-~~~DivIh~A   89 (229)
T PRK06732         16 SVRGITNHSTGQLG-----KIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLV-KDHDVLIHSM   89 (229)
T ss_pred             CceeecCccchHHH-----HHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHh-cCCCEEEeCC
Confidence            46788887776 99     8889998888887776542211            0124455556666666 6899999999


Q ss_pred             cCCCCCCCCCCCCHHHHHHHHHhhhHHH
Q 041276           85 GTNYTTKPTVEYMAEDLSFLMSTNFESA  112 (251)
Q Consensus        85 g~~~~~~~~~~~~~~~~~~~~~~n~~~~  112 (251)
                      |+.. ..+....+.+++..++++|....
T Consensus        90 Avsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         90 AVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             ccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            9875 45566778888999988876654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.54  E-value=0.015  Score=44.45  Aligned_cols=170  Identities=15%  Similarity=0.109  Sum_probs=102.8

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE----------------EeccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTG----------------SVCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~----------------~~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      +++.|.||||-.|     ..++++....|+++..                .+.|+.|++++.+.+        .+.|+||
T Consensus         1 mKIaiIgAsG~~G-----s~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l--------~g~DaVI   67 (211)
T COG2910           1 MKIAIIGASGKAG-----SRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDL--------AGHDAVI   67 (211)
T ss_pred             CeEEEEecCchhH-----HHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhh--------cCCceEE
Confidence            4678999999999     7888888777765543                467888887776655        5799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--------CCC-hhhHHh
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--------NLG-TIYAAT  152 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--------~~~-~~Y~~s  152 (251)
                      ..-|... .+      .+          .-+....+.++..++..+-.|++.|+...+..--        |.+ ..|-..
T Consensus        68 sA~~~~~-~~------~~----------~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~  130 (211)
T COG2910          68 SAFGAGA-SD------ND----------ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPE  130 (211)
T ss_pred             EeccCCC-CC------hh----------HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHH
Confidence            9888763 11      11          1111224556666676667899998877665422        221 234443


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC--CCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE--PYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      -.+..-+.+.|..+   ..+.-.-++|...-.|.-+  ++.. .+.+.    -........+.+|.|-+++.-+.
T Consensus       131 A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll----~n~~G~SrIS~aDYAiA~lDe~E  198 (211)
T COG2910         131 ALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLL----VNAKGESRISYADYAIAVLDELE  198 (211)
T ss_pred             HHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEE----EcCCCceeeeHHHHHHHHHHHHh
Confidence            33444455566665   3477788888766655221  1111 11111    11122345688999988887773

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.45  E-value=0.003  Score=66.20  Aligned_cols=159  Identities=16%  Similarity=0.163  Sum_probs=107.5

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe--------------------ccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV--------------------CDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~--------------------~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+.++.++|++..++++     ..+.+.+...|..+..+.                    +.-.+..++..+++.+....
T Consensus      1752 ~~~~~~~~v~~d~~~~~-----~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNA-----GVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             cccCceeEEEcCCcchH-----HHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccc
Confidence            34578899998888898     789999999988776652                    11235567777777777766


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh----
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY----  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y----  149 (251)
                       +.++.+||..+.......  ..+...+...-...+...|.++|.+.+.+...+++.++.++...|..++......    
T Consensus      1827 -~~~~g~i~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~ 1903 (2582)
T TIGR02813      1827 -AQIDGFIHLQPQHKSVAD--KVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQ 1903 (2582)
T ss_pred             -cccceEEEeccccccccc--cccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccc
Confidence             789999998875531110  0000011111223444567777777666665566789999998877776433221    


Q ss_pred             ----HHhHHHHHHHHHHHHHHHccCCeEEEEEecC
Q 041276          150 ----AATKGAMNQLAKNLACEWARDNIRINSVAPW  180 (251)
Q Consensus       150 ----~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG  180 (251)
                          ....+++.+|+|++++|+....+|...+.|.
T Consensus      1904 ~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1904 QVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence                2358899999999999998777777777764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.42  E-value=0.026  Score=46.02  Aligned_cols=180  Identities=16%  Similarity=0.084  Sum_probs=101.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-----------------EEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKV-----------------TGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-----------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      +.+|||||||.+|     ..+.+++.+.+.++                 .+...|+.++.++...+        .++|.+
T Consensus         1 ~~ilV~GatG~~G-----~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~--------~G~~~~   67 (275)
T COG0702           1 MKILVTGATGFVG-----GAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGA--------KGVDGV   67 (275)
T ss_pred             CeEEEEecccchH-----HHHHHHHHhCCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHh--------ccccEE
Confidence            4689999999999     77777777665443                 45567888888888877        579999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHH
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA  160 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  160 (251)
                      +++.+... ... ..         ............+...     .+..+++.+|...+..  .....|..+|...+...
T Consensus        68 ~~i~~~~~-~~~-~~---------~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l  129 (275)
T COG0702          68 LLISGLLD-GSD-AF---------RAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAAL  129 (275)
T ss_pred             EEEecccc-ccc-ch---------hHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHH
Confidence            88888654 221 11         1112222333333321     2234567666665544  24567899998887776


Q ss_pred             HHHHHHHccCCeEEEEEe-cCcccCCCCCCCCCCHHHHHHHhhCCCC----CCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          161 KNLACEWARDNIRINSVA-PWFITTPLTEPYLSDEKFLEEVKCRTPM----ERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       161 ~~la~e~~~~~i~v~~i~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.       |+.-..+. ++++..... ..  ............+.    -.....+|++..+...+....  ..|+.+
T Consensus       130 ~~s-------g~~~t~lr~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~~~~  197 (275)
T COG0702         130 RSS-------GIPYTTLRRAAFYLGAGA-AF--IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAGRTY  197 (275)
T ss_pred             Hhc-------CCCeEEEecCeeeeccch-hH--HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccCcEE
Confidence            543       44434444 333322111 10  00001111000111    133567899998888876544  557777


Q ss_pred             EeCCC
Q 041276          236 CVDGG  240 (251)
Q Consensus       236 ~vdgG  240 (251)
                      .+.|=
T Consensus       198 ~l~g~  202 (275)
T COG0702         198 ELAGP  202 (275)
T ss_pred             EccCC
Confidence            76664

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.38  E-value=0.015  Score=47.41  Aligned_cols=223  Identities=13%  Similarity=0.079  Sum_probs=121.4

Q ss_pred             CCCEEEEecCCCCcCcHHH--------------------------------HHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAE--------------------------------LNECLREWKTKCFKVTGSVCDASSRAERE   63 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   63 (251)
                      ..|+|||.|+|+|.|-..+                                -..+.+..+..|.-..-+..|.-+.+-=+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            4599999999999991111                                11222333344555566788888888888


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCC---------------------------------CCCCCHHHHHHHHHhhhH
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTNYTTKP---------------------------------TVEYMAEDLSFLMSTNFE  110 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~~~~~~---------------------------------~~~~~~~~~~~~~~~n~~  110 (251)
                      +.++.|+..+ |++|.+|+.-....+..+                                 +.-.+.+++.....|.=-
T Consensus       120 kvIe~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGG  198 (398)
T COG3007         120 KVIEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGG  198 (398)
T ss_pred             HHHHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCc
Confidence            8999999999 899999986553221111                                 112234444444433211


Q ss_pred             HHH-HHHHHHHHHHHhCCCceEEEecccccccCCC--CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC
Q 041276          111 SAY-HLSQLAHPLLKASGAGNIILVSSVCGVLSTN--LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT  187 (251)
Q Consensus       111 ~~~-~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~  187 (251)
                      --+ ..+.+++..-.-..+.+-+-.|-+......+  -.+..+.+|.=+..-.+.+...|+..+-+.+....-.+-|.-.
T Consensus       199 eDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqAS  278 (398)
T COG3007         199 EDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQAS  278 (398)
T ss_pred             chHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhhh
Confidence            001 1233333322222334555555444443332  2357889999999999999999887765555443333333221


Q ss_pred             CCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          188 EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .....-+-......+  .++..++-|-+-+.+..|.++.-  ..|+.+.+|.--.+
T Consensus       279 saIP~~plYla~lfk--vMKekg~HEgcIeQi~rlfse~l--y~g~~~~~D~e~rl  330 (398)
T COG3007         279 SAIPMMPLYLAILFK--VMKEKGTHEGCIEQIDRLFSEKL--YSGSKIQLDDEGRL  330 (398)
T ss_pred             hccccccHHHHHHHH--HHHHcCcchhHHHHHHHHHHHHh--hCCCCCCcCccccc
Confidence            111111111111111  12233456777777778876542  23777777754433

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.35  E-value=0.005  Score=53.08  Aligned_cols=156  Identities=17%  Similarity=0.202  Sum_probs=85.5

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH--------------------HHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREK--------------------LMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~--------------------~~~~i~~   71 (251)
                      ....+..+|+|+||+|++|     +.+.+.+.+.|..+....-|......+..                    .+..+.+
T Consensus        74 ~~~~~~~~VlVvGatG~vG-----~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~  148 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVG-----RRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVE  148 (411)
T ss_pred             CCCCCCCeEEEecCCCchh-----HHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhh
Confidence            3445678999999999999     77788887776443333222221111111                    1111111


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .......+++-++|...  ...      ++.--..+.+.+..++++++    +..+--++++++|+.+.........+..
T Consensus       149 ~~~~~~~~v~~~~ggrp--~~e------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~  216 (411)
T KOG1203|consen  149 AVPKGVVIVIKGAGGRP--EEE------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL  216 (411)
T ss_pred             hccccceeEEecccCCC--Ccc------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh
Confidence            11012345555555432  111      12222345677777777776    5555568999999888766555444442


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTP  185 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~  185 (251)
                       -....-.=+...+++...|+.-..|.||....+
T Consensus       217 -~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  217 -NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             -hhhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence             111111112344555677888888999877654

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.31  E-value=0.0018  Score=51.17  Aligned_cols=145  Identities=14%  Similarity=0.148  Sum_probs=89.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-ee-----------------EEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KV-----------------TGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~-----------------~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +....+|||||+-|-+|     ..+++-++..-+ +.                 -++-+|+-|..++++++-.      .
T Consensus        41 ~~~~PrvLITG~LGQLG-----~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn------~  109 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLG-----RGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVN------K  109 (366)
T ss_pred             cCCCCeEEEecchHHHh-----HHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcc------c
Confidence            34557899999999999     666666664421 11                 1334666666666666532      6


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC------C-----
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST------N-----  144 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~------~-----  144 (251)
                      +||-++|-.......      .+.+.--...+|+.|.-++++.+..    .+ -++..-|.+.+..+.      |     
T Consensus       110 RIdWL~HfSALLSAv------GE~NVpLA~~VNI~GvHNil~vAa~----~k-L~iFVPSTIGAFGPtSPRNPTPdltIQ  178 (366)
T KOG2774|consen  110 RIDWLVHFSALLSAV------GETNVPLALQVNIRGVHNILQVAAK----HK-LKVFVPSTIGAFGPTSPRNPTPDLTIQ  178 (366)
T ss_pred             ccceeeeHHHHHHHh------cccCCceeeeecchhhhHHHHHHHH----cC-eeEeecccccccCCCCCCCCCCCeeee
Confidence            899999976654311      1223334578899999998888633    32 344444555554432      1     


Q ss_pred             -CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEe-cCccc
Q 041276          145 -LGTIYAATKGAMNQLAKNLACEWARDNIRINSVA-PWFIT  183 (251)
Q Consensus       145 -~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~-pG~v~  183 (251)
                       +...|+.||--.+-+-+.+...   .|+.+.++. ||.+.
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is  216 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIIS  216 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhh---cCccceecccCcccc
Confidence             2357999998777776655544   566666554 66553

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.15  E-value=0.0013  Score=54.78  Aligned_cols=67  Identities=15%  Similarity=0.196  Sum_probs=40.2

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cH---HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NE---AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..+++|+++|+|| ||+|                    +.   ++++++.+++.+.+..+.+..+|+++.+++++.+   
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~---  197 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI---  197 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh---
Confidence            3578899999999 6999                    11   3344444444433333344455555544444333   


Q ss_pred             HHhcCCCccEEEEcccCCC
Q 041276           70 SSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~   88 (251)
                           ...|+||||.....
T Consensus       198 -----~~~DilINaTp~Gm  211 (289)
T PRK12548        198 -----ASSDILVNATLVGM  211 (289)
T ss_pred             -----ccCCEEEEeCCCCC
Confidence                 35799999887654

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.88  E-value=0.0034  Score=53.11  Aligned_cols=66  Identities=15%  Similarity=0.153  Sum_probs=45.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-C-CeeEEEeccCCCHHHHHHHHHHHH--------HhcCCCccEEEEc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK-C-FKVTGSVCDASSRAEREKLMKQVS--------SLFNGKLNILINN   83 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~i~--------~~~~~~id~lv~~   83 (251)
                      ++++|+|+||||+|.||     ..+++.+... + .++..+.-   +.+....+.+++.        +.+ ...|++|++
T Consensus       152 ~l~~k~VLVtGAtG~IG-----s~lar~L~~~~gv~~lilv~R---~~~rl~~La~el~~~~i~~l~~~l-~~aDiVv~~  222 (340)
T PRK14982        152 DLSKATVAVVGATGDIG-----SAVCRWLDAKTGVAELLLVAR---QQERLQELQAELGGGKILSLEEAL-PEADIVVWV  222 (340)
T ss_pred             CcCCCEEEEEccChHHH-----HHHHHHHHhhCCCCEEEEEcC---CHHHHHHHHHHhccccHHhHHHHH-ccCCEEEEC
Confidence            68899999999999999     8888888654 3 34443322   2334444443332        445 679999999


Q ss_pred             ccCCC
Q 041276           84 VGTNY   88 (251)
Q Consensus        84 ag~~~   88 (251)
                      ++...
T Consensus       223 ts~~~  227 (340)
T PRK14982        223 ASMPK  227 (340)
T ss_pred             CcCCc
Confidence            98643

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=96.71  E-value=0.0011  Score=52.71  Aligned_cols=192  Identities=14%  Similarity=0.021  Sum_probs=106.0

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc------------------------------CCeeEEEeccCCCHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK------------------------------CFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~------------------------------~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      .|++||||=+|-=|     .-+++.+...                              +.....+-.|++|..++.+++
T Consensus        28 rkvALITGItGQDG-----SYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I  102 (376)
T KOG1372|consen   28 RKVALITGITGQDG-----SYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI  102 (376)
T ss_pred             ceEEEEecccCCCc-----hHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence            47999999998888     2233333322                              234455678999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-----
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-----  141 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-----  141 (251)
                      +.+      +++-++|.|...+..-+| ++    -+-.-++...|++.++.+...+-...  +.-.+-.|.+...     
T Consensus       103 ~~i------kPtEiYnLaAQSHVkvSF-dl----peYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e  169 (376)
T KOG1372|consen  103 STI------KPTEVYNLAAQSHVKVSF-DL----PEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQE  169 (376)
T ss_pred             hcc------CchhhhhhhhhcceEEEe-ec----ccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccC
Confidence            875      788899988876522122 11    12334567788888887765443322  2222333333332     


Q ss_pred             -------CCCCChhhHHhHHHHHHHHHHHHHHH---ccCCeEEEEEecCcccCCCCCCCCCC-HHHHHHHhh------CC
Q 041276          142 -------STNLGTIYAATKGAMNQLAKNLACEW---ARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKC------RT  204 (251)
Q Consensus       142 -------~~~~~~~Y~~sK~a~~~~~~~la~e~---~~~~i~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~------~~  204 (251)
                             |+-+.+.|+++|.+---++-.++..+   +-.||-+|.=+|--=.+-..+++... ....-..+.      ..
T Consensus       170 ~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~  249 (376)
T KOG1372|consen  170 IPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLS  249 (376)
T ss_pred             CCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchh
Confidence                   23346789999976655544444433   34567666666532222122211100 000000001      11


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCC
Q 041276          205 PMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       205 ~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ....++-+.|-.++++.++..+
T Consensus       250 a~RDWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  250 ALRDWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             hhcccchhHHHHHHHHHHHhcC
Confidence            2334666788888887777544

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.70  E-value=0.015  Score=44.18  Aligned_cols=143  Identities=22%  Similarity=0.213  Sum_probs=85.2

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--eeEE-----------------EeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--KVTG-----------------SVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--~~~~-----------------~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+.++.+.++|.|||+-.|     ..+.+++.+.+.  ++..                 ...|.   +.+.+..    ..
T Consensus        13 Df~mq~~s~fvlGAtG~~G-----~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf---~Kl~~~a----~~   80 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCG-----GGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQVEVDF---SKLSQLA----TN   80 (238)
T ss_pred             HHhhhccceEEEecccccc-----HHHHHHHHhcccceeEEEEEeccCCCccccceeeeEEech---HHHHHHH----hh
Confidence            3678889999999999999     788888877642  2221                 12232   2222222    22


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + .++|+++++-|........        +..+.+.-.-.+.+++.+    ++++...|+.+||..+.-.+  ...|--.
T Consensus        81 ~-qg~dV~FcaLgTTRgkaGa--------dgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k~  145 (238)
T KOG4039|consen   81 E-QGPDVLFCALGTTRGKAGA--------DGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMKM  145 (238)
T ss_pred             h-cCCceEEEeeccccccccc--------CceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeeec
Confidence            3 5799999998865311111        111122222223344443    66777899999998776554  4568777


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT  187 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~  187 (251)
                      |.-++.=...|--      -++....||++..+..
T Consensus       146 KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  146 KGEVERDVIELDF------KHIIILRPGPLLGERT  174 (238)
T ss_pred             cchhhhhhhhccc------cEEEEecCcceecccc
Confidence            8655543322211      2577788999866544

>PRK09620 hypothetical protein; Provisional

Probab=96.68  E-value=0.0068  Score=48.58  Aligned_cols=67  Identities=18%  Similarity=0.159  Sum_probs=44.8

Q ss_pred             CCCCEEEEecCC----------------CCcCcHHHHHHHHHHHHhcCCeeEEEeccCC----------------CHHHH
Q 041276           15 LQGMTALVTGGT----------------KGLGNEAELNECLREWKTKCFKVTGSVCDAS----------------SRAER   62 (251)
Q Consensus        15 l~~k~vlItGas----------------~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~----------------~~~~~   62 (251)
                      ++||+||||+|.                |-||     ..+++.+...|.++.++....+                ...++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiG-----s~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIG-----RIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHH-----HHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHH
Confidence            479999999886                7788     8899999988888775542211                11133


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCC
Q 041276           63 EKLMKQVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        63 ~~~~~~i~~~~~~~id~lv~~ag~~~   88 (251)
                      ...+.++...  .++|++||+|+...
T Consensus        76 ~~~l~~~~~~--~~~D~VIH~AAvsD   99 (229)
T PRK09620         76 QDKMKSIITH--EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHhcc--cCCCEEEECccccc
Confidence            3333333322  26999999999854

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.60  E-value=0.023  Score=47.33  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=23.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+++++|+|+++++|     ..+.+.++..+.++..
T Consensus       144 ~g~~vlI~g~~~~~g-----~~~~~~a~~~g~~v~~  174 (325)
T cd08253         144 AGETVLVHGGSGAVG-----HAAVQLARWAGARVIA  174 (325)
T ss_pred             CCCEEEEEcCCchHH-----HHHHHHHHHcCCEEEE
Confidence            579999999999999     6666666666655443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN00106 malate dehydrogenase

Probab=96.53  E-value=0.049  Score=46.02  Aligned_cols=136  Identities=13%  Similarity=0.089  Sum_probs=78.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--CeeEEE--------eccCCCHHHHHHHH-----HHHHHhcCCCccEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC--FKVTGS--------VCDASSRAEREKLM-----KQVSSLFNGKLNIL   80 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~--~~~~~~--------~~D~~~~~~~~~~~-----~~i~~~~~~~id~l   80 (251)
                      ..++|+|||++|.+|     ..++..+...+  .++..+        ..|+.+......+.     ++..+.+ ...|++
T Consensus        17 ~~~KV~IiGaaG~VG-----~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l-~~aDiV   90 (323)
T PLN00106         17 PGFKVAVLGAAGGIG-----QPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDAL-KGADLV   90 (323)
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHc-CCCCEE
Confidence            347899999999999     55555554322  233322        22332211100110     0112334 689999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEeccccc----c--------cCCCCCh
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCG----V--------LSTNLGT  147 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~----~--------~~~~~~~  147 (251)
                      |+.||....+       ...+.+.+..|+.....+.+.+    ++... +.++++|-...    .        .+.+..-
T Consensus        91 VitAG~~~~~-------g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~  159 (323)
T PLN00106         91 IIPAGVPRKP-------GMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKK  159 (323)
T ss_pred             EEeCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcce
Confidence            9999975421       1336777888887766555554    55543 44444444443    1        2244456


Q ss_pred             hhHHhHHHHHHHHHHHHHHHc
Q 041276          148 IYAATKGAMNQLAKNLACEWA  168 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~  168 (251)
                      .|+.++.-...|...++.++.
T Consensus       160 viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        160 LFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             EEEEecchHHHHHHHHHHHhC
Confidence            788888777778888888875

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=96.34  E-value=0.015  Score=48.89  Aligned_cols=61  Identities=23%  Similarity=0.346  Sum_probs=51.0

Q ss_pred             EEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           19 TALVTGGTKGLG-----------------------NEAELNECLREWKTKC----FKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        19 ~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      -++|.||||--|                       ++++|+++++.+.+..    .....+.+|.+|++++.+++.    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            489999999999                       7788888888887764    223478999999999999994    


Q ss_pred             hcCCCccEEEEcccCC
Q 041276           72 LFNGKLNILINNVGTN   87 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~   87 (251)
                          +..+|+||+|..
T Consensus        83 ----~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ----QARVIVNCVGPY   94 (423)
T ss_pred             ----hhEEEEeccccc
Confidence                678999999965

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.24  E-value=0.014  Score=45.11  Aligned_cols=73  Identities=19%  Similarity=0.188  Sum_probs=46.5

Q ss_pred             CCCCEEEEecCCCC--------cC---cHHHHHHHHHHHHhcCCeeEEEeccCCC--H--------HHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKG--------LG---NEAELNECLREWKTKCFKVTGSVCDASS--R--------AEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~g--------iG---~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~--------~~~~~~~~~i~~~~   73 (251)
                      |+||+||||+|..-        |.   +.....++++.+...|.++.++....+-  +        ++.+++.+.+.+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~   80 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL   80 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence            57999999997532        22   2233478889999999999888665432  2        46677777777777


Q ss_pred             CCCccEEEEcccCCC
Q 041276           74 NGKLNILINNVGTNY   88 (251)
Q Consensus        74 ~~~id~lv~~ag~~~   88 (251)
                       ..-|++|++|.+..
T Consensus        81 -~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   81 -PSADIIIMAAAVSD   94 (185)
T ss_dssp             -GGGSEEEE-SB--S
T ss_pred             -CcceeEEEecchhh
Confidence             66799999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.23  E-value=0.019  Score=44.79  Aligned_cols=35  Identities=29%  Similarity=0.286  Sum_probs=25.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .++++++++|+||+|++|     ..+...+...+.++..+
T Consensus        24 ~~l~~~~vlVlGgtG~iG-----~~~a~~l~~~g~~V~l~   58 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVG-----QRAAVLLAREGARVVLV   58 (194)
T ss_pred             cCCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEE
Confidence            467899999999999999     55555555555444433

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PTZ00325 malate dehydrogenase; Provisional

Probab=96.05  E-value=0.028  Score=47.39  Aligned_cols=136  Identities=13%  Similarity=0.052  Sum_probs=72.1

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--CeeEEEeccCCCHHHHH--------HHH-----HHHHHhcCCCccE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC--FKVTGSVCDASSRAERE--------KLM-----KQVSSLFNGKLNI   79 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~--------~~~-----~~i~~~~~~~id~   79 (251)
                      ++.++|+|+|++|.+|     ..++..+...+  .++..+..+....+..+        ...     ....+.. ...|+
T Consensus         6 ~~~~KI~IiGaaG~VG-----s~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l-~gaDv   79 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIG-----QPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKAL-RGADL   79 (321)
T ss_pred             CCCCEEEEECCCCHHH-----HHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHh-CCCCE
Confidence            4567999999999999     55555554332  23332222211111110        000     0002233 57999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc-------------ccCCCCC
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG-------------VLSTNLG  146 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~-------------~~~~~~~  146 (251)
                      ||+++|....+       .+.+.+.+..|+.....+.+.    |++.+..++|+++|-..             ..+.|..
T Consensus        80 VVitaG~~~~~-------~~tR~dll~~N~~i~~~i~~~----i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~  148 (321)
T PTZ00325         80 VLICAGVPRKP-------GMTRDDLFNTNAPIVRDLVAA----VASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPR  148 (321)
T ss_pred             EEECCCCCCCC-------CCCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChh
Confidence            99999975311       123566788887766555555    56666567777776221             1223444


Q ss_pred             hhhHHhHHHHHHHHHHHHHHH
Q 041276          147 TIYAATKGAMNQLAKNLACEW  167 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~  167 (251)
                      ..|+.+-.=-.-|...+++.+
T Consensus       149 ~viG~g~LDs~R~r~~la~~l  169 (321)
T PTZ00325        149 KLFGVTTLDVVRARKFVAEAL  169 (321)
T ss_pred             heeechhHHHHHHHHHHHHHh
Confidence            456665222233445555554

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.80  E-value=0.047  Score=45.03  Aligned_cols=94  Identities=19%  Similarity=0.244  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe--------------ccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV--------------CDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~--------------~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      +|.+|+|++|++..|     .-+.+-.+-.|.++..+.              +|..-.-.-+.+.+.+++..+..||+.+
T Consensus       150 ~GetvvVSaAaGaVG-----svvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         150 AGETVVVSAAAGAVG-----SVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYF  224 (340)
T ss_pred             CCCEEEEEecccccc-----hHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEE
Confidence            599999999999999     333333333444444431              2222111111455555555556799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      -|.|...                           ..++++.|...  +||+..+-++.+...
T Consensus       225 eNVGg~v---------------------------~DAv~~~ln~~--aRi~~CG~IS~YN~~  257 (340)
T COG2130         225 ENVGGEV---------------------------LDAVLPLLNLF--ARIPVCGAISQYNAP  257 (340)
T ss_pred             EcCCchH---------------------------HHHHHHhhccc--cceeeeeehhhcCCC
Confidence            9999643                           23455666544  899998888887655

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.80  E-value=0.044  Score=48.52  Aligned_cols=66  Identities=17%  Similarity=0.254  Sum_probs=46.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH-------------hcCCCccEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS-------------LFNGKLNIL   80 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-------------~~~~~id~l   80 (251)
                      ++++|+|+|+|+++ +|     ..+++.+.+.|..+...  |....+.+.+.++++.+             .. +++|+|
T Consensus         2 ~~~~k~v~iiG~g~-~G-----~~~A~~l~~~G~~V~~~--d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~d~v   72 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SG-----LALAKFLKKLGAKVILT--DEKEEDQLKEALEELGELGIELVLGEYPEEFL-EGVDLV   72 (450)
T ss_pred             CcCCCEEEEECCCH-HH-----HHHHHHHHHCCCEEEEE--eCCchHHHHHHHHHHHhcCCEEEeCCcchhHh-hcCCEE
Confidence            57889999999888 99     78888998888776654  55444444444444332             12 469999


Q ss_pred             EEcccCCC
Q 041276           81 INNVGTNY   88 (251)
Q Consensus        81 v~~ag~~~   88 (251)
                      |+++|...
T Consensus        73 v~~~g~~~   80 (450)
T PRK14106         73 VVSPGVPL   80 (450)
T ss_pred             EECCCCCC
Confidence            99999753

>PRK05086 malate dehydrogenase; Provisional

Probab=95.58  E-value=0.029  Score=47.19  Aligned_cols=102  Identities=17%  Similarity=0.119  Sum_probs=53.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHh---cCCeeEEEe---------ccCCCHHHHHHH----HHHHHHhcCCCccEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKT---KCFKVTGSV---------CDASSRAEREKL----MKQVSSLFNGKLNILI   81 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~---~~~~~~~~~---------~D~~~~~~~~~~----~~~i~~~~~~~id~lv   81 (251)
                      ++++|.||+|++|     ..++..+..   .+..+..+.         +|+.+.+....+    .+.+.+.. ...|++|
T Consensus         1 ~KI~IIGAsG~VG-----~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l-~~~DiVI   74 (312)
T PRK05086          1 MKVAVLGAAGGIG-----QALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPAL-EGADVVL   74 (312)
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHc-CCCCEEE
Confidence            5789999999999     666655533   122333332         344432100000    12223344 5699999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecc
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSS  136 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss  136 (251)
                      .++|....++    .   .-.+.+..|......+    .+.|++.....+|.+.|
T Consensus        75 itaG~~~~~~----~---~R~dll~~N~~i~~~i----i~~i~~~~~~~ivivvs  118 (312)
T PRK05086         75 ISAGVARKPG----M---DRSDLFNVNAGIVKNL----VEKVAKTCPKACIGIIT  118 (312)
T ss_pred             EcCCCCCCCC----C---CHHHHHHHHHHHHHHH----HHHHHHhCCCeEEEEcc
Confidence            9999754211    1   2344566666555444    44456554444444443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.50  E-value=0.18  Score=42.34  Aligned_cols=63  Identities=19%  Similarity=0.272  Sum_probs=38.9

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-----------------ccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------------CDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ..+++++|+|+++++|     ..+.+.+...+.++....                 .|..+.+..+.+.+....   +++
T Consensus       165 ~~~~~vlI~g~~~~iG-----~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  236 (342)
T cd08266         165 RPGETVLVHGAGSGVG-----SAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGK---RGV  236 (342)
T ss_pred             CCCCEEEEECCCchHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCC---CCC
Confidence            3578999999999999     666666666665543321                 233333333333332211   468


Q ss_pred             cEEEEccc
Q 041276           78 NILINNVG   85 (251)
Q Consensus        78 d~lv~~ag   85 (251)
                      |++++++|
T Consensus       237 d~~i~~~g  244 (342)
T cd08266         237 DVVVEHVG  244 (342)
T ss_pred             cEEEECCc
Confidence            99999887

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.28  E-value=0.039  Score=47.89  Aligned_cols=57  Identities=19%  Similarity=0.244  Sum_probs=37.9

Q ss_pred             EEEecCCCCcC---------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           20 ALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        20 vlItGas~giG---------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |+|.|+ |.+|                     +.++++++.+.+  .+.++.++.+|+.|.+++.+++        .+.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~--------~~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELL--------RGCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHH--------TTSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHH--------hcCC
Confidence            688999 9999                     334444444443  3457889999999999999988        4679


Q ss_pred             EEEEcccCC
Q 041276           79 ILINNVGTN   87 (251)
Q Consensus        79 ~lv~~ag~~   87 (251)
                      +|||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd00704 MDH Malate dehydrogenase

Probab=94.92  E-value=0.15  Score=43.09  Aligned_cols=101  Identities=16%  Similarity=0.139  Sum_probs=54.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------CeeEEEeccCCCHHHH--H--HHHHHHHHhcCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKC-------------------FKVTGSVCDASSRAER--E--KLMKQVSSLFNG   75 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~-------------------~~~~~~~~D~~~~~~~--~--~~~~~i~~~~~~   75 (251)
                      +|.||||+|.+|     ..++..+...+                   ........|+.|....  .  ..-....+.+ .
T Consensus         2 KV~IiGAaG~VG-----~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~-~   75 (323)
T cd00704           2 HVLITGAAGQIG-----YNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAF-K   75 (323)
T ss_pred             EEEEECCCcHHH-----HHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHh-C
Confidence            589999999999     44443333211                   1233444555554200  0  0001223344 6


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCceEEEecc
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS--GAGNIILVSS  136 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~g~iv~vss  136 (251)
                      ..|++|+.||...  .+  ..+   -.+.+..|+    .+.+.+.+.+++.  +.+.++++|-
T Consensus        76 ~aDiVVitAG~~~--~~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          76 DVDVAILVGAFPR--KP--GME---RADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             CCCEEEEeCCCCC--Cc--CCc---HHHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            7999999999753  21  122   334455554    4556666666666  3466776664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.61  E-value=0.12  Score=44.20  Aligned_cols=64  Identities=25%  Similarity=0.363  Sum_probs=41.5

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEE----------------eccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGS----------------VCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~----------------~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      -+|+.|||.||++|+|     ..+.+-.+..+ ..+...                ..|-.+++-++.+.+..   . +++
T Consensus       156 ~~g~~vLv~ggsggVG-----~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~---~-~~~  226 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVG-----TAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT---G-KGV  226 (347)
T ss_pred             CCCCeEEEEeCCcHHH-----HHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc---C-CCc
Confidence            3688999999999999     66666666555 233222                34555533333333322   2 689


Q ss_pred             cEEEEcccCC
Q 041276           78 NILINNVGTN   87 (251)
Q Consensus        78 d~lv~~ag~~   87 (251)
                      |+|+.|+|..
T Consensus       227 DvVlD~vg~~  236 (347)
T KOG1198|consen  227 DVVLDCVGGS  236 (347)
T ss_pred             cEEEECCCCC
Confidence            9999999964

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.22  E-value=0.19  Score=41.59  Aligned_cols=66  Identities=17%  Similarity=0.205  Sum_probs=43.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHH------------HhcCCCccE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSVCDASSRAEREKLMKQVS------------SLFNGKLNI   79 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~------------~~~~~~id~   79 (251)
                      .++.+|+|+|+|+ ||+|     ..++..+...+ .++.++.-+   .+..+++.+++.            +.. ...|+
T Consensus       119 ~~~~~k~vlVlGa-Gg~a-----~ai~~aL~~~g~~~V~v~~R~---~~~a~~l~~~~~~~~~~~~~~~~~~~~-~~~Di  188 (278)
T PRK00258        119 VDLKGKRILILGA-GGAA-----RAVILPLLDLGVAEITIVNRT---VERAEELAKLFGALGKAELDLELQEEL-ADFDL  188 (278)
T ss_pred             CCCCCCEEEEEcC-cHHH-----HHHHHHHHHcCCCEEEEEeCC---HHHHHHHHHHhhhccceeecccchhcc-ccCCE
Confidence            3678899999997 8999     78888888776 556555443   333333333321            112 46899


Q ss_pred             EEEcccCCC
Q 041276           80 LINNVGTNY   88 (251)
Q Consensus        80 lv~~ag~~~   88 (251)
                      |||+.....
T Consensus       189 vInaTp~g~  197 (278)
T PRK00258        189 IINATSAGM  197 (278)
T ss_pred             EEECCcCCC
Confidence            999987654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=94.14  E-value=0.3  Score=41.42  Aligned_cols=101  Identities=13%  Similarity=0.062  Sum_probs=54.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcC-------CeeEEE------------eccCCCHH-----HHHHHHHHHHHhc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKC-------FKVTGS------------VCDASSRA-----EREKLMKQVSSLF   73 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~-------~~~~~~------------~~D~~~~~-----~~~~~~~~i~~~~   73 (251)
                      -+|+||||+|.+|     ..++..+...+       .++..+            ..|+.|..     .+. .-....+.+
T Consensus         3 ~kV~I~GAaG~VG-----~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~-~~~~~~~~l   76 (325)
T cd01336           3 IRVLVTGAAGQIA-----YSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVV-ATTDPEEAF   76 (325)
T ss_pred             eEEEEECCCCHHH-----HHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCce-ecCCHHHHh
Confidence            4699999999999     55555554422       122222            22332211     000 012223444


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-C-CceEEEecc
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-G-AGNIILVSS  136 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~-~g~iv~vss  136 (251)
                       .+.|+|||+||....+    ..+   -.+.++.|+.    +.+.+.+.+.+. + .+.++.+|.
T Consensus        77 -~~aDiVI~tAG~~~~~----~~~---R~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          77 -KDVDVAILVGAMPRKE----GME---RKDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             -CCCCEEEEeCCcCCCC----CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence             6899999999975421    122   2445555554    445555555655 2 567777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.85  E-value=0.22  Score=42.26  Aligned_cols=25  Identities=32%  Similarity=0.466  Sum_probs=19.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      |++|||+||+||+|     ..+.+-.+..|
T Consensus       143 g~~VLV~gaaGgVG-----~~aiQlAk~~G  167 (326)
T COG0604         143 GETVLVHGAAGGVG-----SAAIQLAKALG  167 (326)
T ss_pred             CCEEEEecCCchHH-----HHHHHHHHHcC
Confidence            89999999999999     55555555554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=93.61  E-value=0.17  Score=43.71  Aligned_cols=62  Identities=26%  Similarity=0.304  Sum_probs=42.1

Q ss_pred             CEEEEecCCCCcCcHH-----------------HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           18 MTALVTGGTKGLGNEA-----------------ELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        18 k~vlItGas~giG~~~-----------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      +.|||.|+ |++|+..                 +.+++.+.....+.++.+..+|+.+.+++.++++        ..|++
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~--------~~d~V   72 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK--------DFDLV   72 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh--------cCCEE
Confidence            67899999 9999111                 0111112112223478899999999999999985        45999


Q ss_pred             EEcccCCC
Q 041276           81 INNVGTNY   88 (251)
Q Consensus        81 v~~ag~~~   88 (251)
                      |+++....
T Consensus        73 In~~p~~~   80 (389)
T COG1748          73 INAAPPFV   80 (389)
T ss_pred             EEeCCchh
Confidence            99998653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=93.49  E-value=0.11  Score=37.89  Aligned_cols=66  Identities=20%  Similarity=0.225  Sum_probs=44.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHHHHHH-------------HhcCCCcc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-VTGSVCDASSRAEREKLMKQVS-------------SLFNGKLN   78 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~i~-------------~~~~~~id   78 (251)
                      .++++|+++|.|+ ||.|     ..++..+...+.+ +..+.   .+.+..+++.+.+.             +.. ...|
T Consensus         8 ~~l~~~~vlviGa-Gg~a-----r~v~~~L~~~g~~~i~i~n---Rt~~ra~~l~~~~~~~~~~~~~~~~~~~~~-~~~D   77 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAA-----RAVAAALAALGAKEITIVN---RTPERAEALAEEFGGVNIEAIPLEDLEEAL-QEAD   77 (135)
T ss_dssp             STGTTSEEEEESS-SHHH-----HHHHHHHHHTTSSEEEEEE---SSHHHHHHHHHHHTGCSEEEEEGGGHCHHH-HTES
T ss_pred             CCcCCCEEEEECC-HHHH-----HHHHHHHHHcCCCEEEEEE---CCHHHHHHHHHHcCccccceeeHHHHHHHH-hhCC
Confidence            4789999999998 7888     7777777777654 44443   34455555555441             112 4699


Q ss_pred             EEEEcccCCC
Q 041276           79 ILINNVGTNY   88 (251)
Q Consensus        79 ~lv~~ag~~~   88 (251)
                      ++|++.+...
T Consensus        78 ivI~aT~~~~   87 (135)
T PF01488_consen   78 IVINATPSGM   87 (135)
T ss_dssp             EEEE-SSTTS
T ss_pred             eEEEecCCCC
Confidence            9999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=93.41  E-value=0.051  Score=35.06  Aligned_cols=13  Identities=38%  Similarity=0.705  Sum_probs=11.8

Q ss_pred             CEEEEecCCCCcC
Q 041276           18 MTALVTGGTKGLG   30 (251)
Q Consensus        18 k~vlItGas~giG   30 (251)
                      |+|||+|+|+|.|
T Consensus        40 K~VLViGaStGyG   52 (78)
T PF12242_consen   40 KKVLVIGASTGYG   52 (78)
T ss_dssp             SEEEEES-SSHHH
T ss_pred             ceEEEEecCCccc
Confidence            9999999999999

>cd08293 PTGR2 Prostaglandin reductase

Probab=93.26  E-value=0.29  Score=41.48  Aligned_cols=29  Identities=21%  Similarity=0.208  Sum_probs=22.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-KVTG   51 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~   51 (251)
                      ++|||+||++++|     ..+.+-.+..|. ++..
T Consensus       156 ~~VlI~ga~g~vG-----~~aiqlAk~~G~~~Vi~  185 (345)
T cd08293         156 QTMVVSGAAGACG-----SLAGQIGRLLGCSRVVG  185 (345)
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHHcCCCEEEE
Confidence            8999999999999     666666666665 4443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.91  E-value=0.36  Score=42.74  Aligned_cols=69  Identities=22%  Similarity=0.286  Sum_probs=41.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHH---------HHHhcCCCccEEEEc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR-AEREKLMKQ---------VSSLFNGKLNILINN   83 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~---------i~~~~~~~id~lv~~   83 (251)
                      ++++|+|+|||+++ +|     ..+++.+.+.|.++.....+.... ...+.+-+.         .......++|+||++
T Consensus         2 ~~~~k~v~v~G~g~-~G-----~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s   75 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SG-----YAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKN   75 (447)
T ss_pred             CcCCCEEEEEeeCH-HH-----HHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEEC
Confidence            46789999999986 99     778888888887766553222111 111222110         000010138999999


Q ss_pred             ccCCC
Q 041276           84 VGTNY   88 (251)
Q Consensus        84 ag~~~   88 (251)
                      +|+..
T Consensus        76 ~gi~~   80 (447)
T PRK02472         76 PGIPY   80 (447)
T ss_pred             CCCCC
Confidence            99764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=92.72  E-value=0.34  Score=41.38  Aligned_cols=30  Identities=17%  Similarity=0.152  Sum_probs=23.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~   50 (251)
                      .|.+|||+|+++++|     ..+.+-.+..|.++.
T Consensus       158 ~g~~VlV~GaaG~vG-----~~aiqlAk~~G~~Vi  187 (348)
T PLN03154        158 KGDSVFVSAASGAVG-----QLVGQLAKLHGCYVV  187 (348)
T ss_pred             CCCEEEEecCccHHH-----HHHHHHHHHcCCEEE
Confidence            589999999999999     666666666665543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=92.33  E-value=0.46  Score=40.22  Aligned_cols=31  Identities=26%  Similarity=0.267  Sum_probs=24.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|++|||+||++++|     ..+.+-.+..|.++..
T Consensus       151 ~g~~VlI~Ga~G~vG-----~~aiqlAk~~G~~Vi~  181 (338)
T cd08295         151 KGETVFVSAASGAVG-----QLVGQLAKLKGCYVVG  181 (338)
T ss_pred             CCCEEEEecCccHHH-----HHHHHHHHHcCCEEEE
Confidence            589999999999999     6666666666766543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=92.25  E-value=0.37  Score=40.55  Aligned_cols=30  Identities=27%  Similarity=0.235  Sum_probs=23.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~   50 (251)
                      .|.+|||+|+++++|     ..+.+-.+..|.++.
T Consensus       138 ~g~~VLI~ga~g~vG-----~~aiqlAk~~G~~Vi  167 (325)
T TIGR02825       138 GGETVMVNAAAGAVG-----SVVGQIAKLKGCKVV  167 (325)
T ss_pred             CCCEEEEeCCccHHH-----HHHHHHHHHcCCEEE
Confidence            578999999999999     666666666666544

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=92.03  E-value=2.7  Score=34.61  Aligned_cols=140  Identities=11%  Similarity=0.049  Sum_probs=71.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEeccCCCHH----------------HHHHHHHHHHHhcC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSVCDASSRA----------------EREKLMKQVSSLFN   74 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~----------------~~~~~~~~i~~~~~   74 (251)
                      ...|+++.|+|.|+ ||+|     ..+++.|...| .++..+..|.-+..                -++.+.+.+.+-. 
T Consensus        25 ~~kL~~s~VlVvG~-GGVG-----s~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~IN-   97 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVG-----SWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQIN-   97 (268)
T ss_pred             HHHhcCCCEEEECc-CHHH-----HHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHC-
Confidence            34567888999876 5788     77777777776 56666655533222                2223344444332 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHH----h------hhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMS----T------NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN  144 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~----~------n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~  144 (251)
                      ..+.+..+...+          ++++....+.    +      ++..-..+.+.+    ++.+ -.+|...+..+.....
T Consensus        98 P~~~V~~i~~~i----------~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c----~~~~-ip~I~~gGag~k~dp~  162 (268)
T PRK15116         98 PECRVTVVDDFI----------TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYC----RRNK-IPLVTTGGAGGQIDPT  162 (268)
T ss_pred             CCcEEEEEeccc----------ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHH----HHcC-CCEEEECCcccCCCCC
Confidence            233333221111          1222222221    0      122222233332    3333 3455555555544433


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHcc-CCeE
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWAR-DNIR  173 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~-~~i~  173 (251)
                      ..-.-..+|.....|++.++++|.+ +|++
T Consensus       163 ~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        163 QIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             eEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            3333445666778899999999987 6764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=91.79  E-value=0.44  Score=39.96  Aligned_cols=30  Identities=30%  Similarity=0.292  Sum_probs=23.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~   50 (251)
                      .|.+|||+||++++|     ..+.+-.+..|.++.
T Consensus       143 ~g~~vlI~ga~g~vG-----~~aiqlA~~~G~~vi  172 (329)
T cd08294         143 AGETVVVNGAAGAVG-----SLVGQIAKIKGCKVI  172 (329)
T ss_pred             CCCEEEEecCccHHH-----HHHHHHHHHcCCEEE
Confidence            578999999999999     666666666666543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=91.68  E-value=0.65  Score=38.19  Aligned_cols=65  Identities=12%  Similarity=0.154  Sum_probs=42.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH------------hcCCCccEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS------------LFNGKLNILI   81 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~------------~~~~~id~lv   81 (251)
                      ...+|+++|+|+ ||+|     ..++..+...+.++..+.-   +.+..+++.+.+..            .. .+.|+||
T Consensus       114 ~~~~k~vliiGa-Gg~g-----~aia~~L~~~g~~v~v~~R---~~~~~~~la~~~~~~~~~~~~~~~~~~~-~~~DivI  183 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAA-----RAVALPLLKADCNVIIANR---TVSKAEELAERFQRYGEIQAFSMDELPL-HRVDLII  183 (270)
T ss_pred             CccCCEEEEEcC-cHHH-----HHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHHhhcCceEEechhhhcc-cCccEEE
Confidence            356899999998 6999     7777777776655544432   33444444443321            11 3689999


Q ss_pred             EcccCCC
Q 041276           82 NNVGTNY   88 (251)
Q Consensus        82 ~~ag~~~   88 (251)
                      ++.+...
T Consensus       184 natp~gm  190 (270)
T TIGR00507       184 NATSAGM  190 (270)
T ss_pred             ECCCCCC
Confidence            9998754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=91.58  E-value=0.67  Score=35.26  Aligned_cols=59  Identities=19%  Similarity=0.187  Sum_probs=40.6

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      .++.+|+|+|.|++.-+|     ..+++.+.+.+.++....-.   .+       ++.+.. ...|+||.+.+..
T Consensus        40 ~~l~gk~vlViG~G~~~G-----~~~a~~L~~~g~~V~v~~r~---~~-------~l~~~l-~~aDiVIsat~~~   98 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVG-----KPLAALLLNRNATVTVCHSK---TK-------NLKEHT-KQADIVIVAVGKP   98 (168)
T ss_pred             CCCCCCEEEEECCcHHHH-----HHHHHHHhhCCCEEEEEECC---ch-------hHHHHH-hhCCEEEEcCCCC
Confidence            468999999999966668     66888888877654443322   12       222233 5799999998853

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=91.54  E-value=0.64  Score=38.90  Aligned_cols=32  Identities=31%  Similarity=0.375  Sum_probs=25.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .+.+++|+|+++++|     ..+.+.++..+.++..+
T Consensus       162 ~~~~vlI~ga~g~vG-----~~~~~~a~~~g~~v~~~  193 (332)
T cd08259         162 KGDTVLVTGAGGGVG-----IHAIQLAKALGARVIAV  193 (332)
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHcCCeEEEE
Confidence            578999999999999     77777787777666444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=91.47  E-value=0.71  Score=34.19  Aligned_cols=65  Identities=15%  Similarity=0.256  Sum_probs=41.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHH------------HhcCCCccEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSVCDASSRAEREKLMKQVS------------SLFNGKLNIL   80 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~------------~~~~~~id~l   80 (251)
                      ++++++++|+|+ +++|     ...++.+...+ .++..+  |. +++..+++.++..            +.. .+.|++
T Consensus        16 ~~~~~~i~iiG~-G~~g-----~~~a~~l~~~g~~~v~v~--~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvv   85 (155)
T cd01065          16 ELKGKKVLILGA-GGAA-----RAVAYALAELGAAKIVIV--NR-TLEKAKALAERFGELGIAIAYLDLEELL-AEADLI   85 (155)
T ss_pred             CCCCCEEEEECC-cHHH-----HHHHHHHHHCCCCEEEEE--cC-CHHHHHHHHHHHhhcccceeecchhhcc-ccCCEE
Confidence            467899999998 7999     77787877764 444444  32 3333444333322            113 579999


Q ss_pred             EEcccCCC
Q 041276           81 INNVGTNY   88 (251)
Q Consensus        81 v~~ag~~~   88 (251)
                      |++.+...
T Consensus        86 i~~~~~~~   93 (155)
T cd01065          86 INTTPVGM   93 (155)
T ss_pred             EeCcCCCC
Confidence            99998654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=91.37  E-value=1.2  Score=37.67  Aligned_cols=101  Identities=15%  Similarity=0.105  Sum_probs=54.8

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------CeeEEEeccCCCHHHHH--HHH--HHHHHhcCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKC-------------------FKVTGSVCDASSRAERE--KLM--KQVSSLFNG   75 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~-------------------~~~~~~~~D~~~~~~~~--~~~--~~i~~~~~~   75 (251)
                      +|.|+|++|.+|     ..++..+...+                   ........|+.|.....  ...  ....+.+ .
T Consensus         1 ~V~IiGaaG~VG-----~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~-~   74 (324)
T TIGR01758         1 RVVVTGAAGQIG-----YALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAF-T   74 (324)
T ss_pred             CEEEECCCcHHH-----HHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHh-C
Confidence            478999999999     33333333210                   01334455665554111  000  0112334 6


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCceEEEecc
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS--GAGNIILVSS  136 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~g~iv~vss  136 (251)
                      ..|++|++||... . +  .   +.+.+.+..|+.    +.+.+.+.+.+.  +.+.++++|.
T Consensus        75 ~aDiVVitAG~~~-~-~--~---~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        75 DVDVAILVGAFPR-K-E--G---MERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             CCCEEEEcCCCCC-C-C--C---CcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            7999999999753 1 1  1   224555665654    455555666665  3467777664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.31  E-value=2  Score=34.57  Aligned_cols=32  Identities=25%  Similarity=0.155  Sum_probs=22.8

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      ..+++++|+|+++ +|     ..+.+.++..+.++...
T Consensus       133 ~~~~~vli~g~~~-~G-----~~~~~~a~~~g~~v~~~  164 (271)
T cd05188         133 KPGDTVLVLGAGG-VG-----LLAAQLAKAAGARVIVT  164 (271)
T ss_pred             CCCCEEEEECCCH-HH-----HHHHHHHHHcCCeEEEE
Confidence            3678999999998 99     66666666666554433

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06849 hypothetical protein; Provisional

Probab=91.25  E-value=0.92  Score=39.40  Aligned_cols=63  Identities=14%  Similarity=0.068  Sum_probs=43.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEecc--------------------CCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCD--------------------ASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D--------------------~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +.|+|||||++.++|     -.+++.+.+.|.++..+..+                    -.+.+...+.+.++.+++  
T Consensus         3 ~~~~VLI~G~~~~~~-----l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~--   75 (389)
T PRK06849          3 TKKTVLITGARAPAA-----LELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE--   75 (389)
T ss_pred             CCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc--
Confidence            359999999999998     88888888888777655322                    123333444444555554  


Q ss_pred             CccEEEEccc
Q 041276           76 KLNILINNVG   85 (251)
Q Consensus        76 ~id~lv~~ag   85 (251)
                      ++|++|-...
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            6999987664

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=91.14  E-value=0.98  Score=40.25  Aligned_cols=74  Identities=14%  Similarity=0.063  Sum_probs=52.7

Q ss_pred             cCCCCCEEEEecCCC--------CcC---cHHHHHHHHHHHHhcCCeeEEEeccCC----------CHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTK--------GLG---NEAELNECLREWKTKCFKVTGSVCDAS----------SRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~--------giG---~~~~~~~~~~~~~~~~~~~~~~~~D~~----------~~~~~~~~~~~i~~   71 (251)
                      .+|+||.||||+|..        .|+   +..-..++++.+...|.++..+...+.          .-++.+++.+.+.+
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~  331 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEA  331 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHh
Confidence            358999999999853        333   223346788888888988888753222          22456777777777


Q ss_pred             hcCCCccEEEEcccCCC
Q 041276           72 LFNGKLNILINNVGTNY   88 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~   88 (251)
                      .+  +.|++|++|.+..
T Consensus       332 ~~--~~Di~I~aAAVaD  346 (475)
T PRK13982        332 AL--PADIAIFAAAVAD  346 (475)
T ss_pred             hC--CCCEEEEeccccc
Confidence            76  3799999999764

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=90.84  E-value=0.79  Score=38.41  Aligned_cols=32  Identities=22%  Similarity=0.203  Sum_probs=24.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .+.+++|.|+++++|     ..+.+..+..|.++...
T Consensus       145 ~~~~vlI~g~~g~ig-----~~~~~~a~~~G~~vi~~  176 (329)
T cd05288         145 PGETVVVSAAAGAVG-----SVVGQIAKLLGARVVGI  176 (329)
T ss_pred             CCCEEEEecCcchHH-----HHHHHHHHHcCCEEEEE
Confidence            578999999999999     66667777667655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=90.73  E-value=7.2  Score=30.99  Aligned_cols=141  Identities=13%  Similarity=0.111  Sum_probs=79.4

Q ss_pred             HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCC------------------------
Q 041276           37 ECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP------------------------   92 (251)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~------------------------   92 (251)
                      .+.+..++.|.....+..|.-+.+--++.++.|++.+ |++|.||+.-....+..|                        
T Consensus        13 aF~~~A~~~Gl~a~~ingDAFS~e~K~~vI~~Ik~~~-G~vDLvVYSLAsp~R~~P~tG~~~~S~LKpig~~~t~~tld~   91 (237)
T PF12241_consen   13 AFEKAAEAAGLYAKSINGDAFSDEMKEQVIELIKEDF-GKVDLVVYSLASPRRTDPDTGETYRSVLKPIGEPYTGKTLDT   91 (237)
T ss_dssp             HHHHHHHHTT--EEEEES-TTSHHHHHHHHHHHHHHT-S-EEEEEE----SEEE-TTT--EEE----BSSS-EEEEEEET
T ss_pred             HHHHHHHHCCCeeeecccccCCHHHHHHHHHHHHHhc-CCccEEEEeccCCCCCCCCCCCEEeeeeccCCCccccceeec
Confidence            3445556678888999999999999999999999999 899999886553211111                        


Q ss_pred             ---------CCCCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHhCC----CceEEEecccccccCC--CCChhhHHhHHHH
Q 041276           93 ---------TVEYMAEDLSFLMSTNFESAY-HLSQLAHPLLKASG----AGNIILVSSVCGVLST--NLGTIYAATKGAM  156 (251)
Q Consensus        93 ---------~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~~m~~~~----~g~iv~vss~~~~~~~--~~~~~Y~~sK~a~  156 (251)
                               ..--+++++++...|.=---+ ..++++    .+.+    +.+-|-.|-+......  -..+.-+.+|.-+
T Consensus        92 ~~~~~~~~tiepAt~eEi~~TvkVMGGEDWe~Wi~aL----~~AgvLA~g~kTvAySYIG~~~T~pIY~~GTiG~AK~dL  167 (237)
T PF12241_consen   92 ETDEVSEVTIEPATEEEIENTVKVMGGEDWELWIDAL----KEAGVLAEGFKTVAYSYIGPELTWPIYRDGTIGKAKEDL  167 (237)
T ss_dssp             TTTEEEEEEE----HHHHHHHHHHHSSHHHHHHHHHH----HHCT-EEEEEEEEEEEE---GGGCCCCTTCHHHHHHHHH
T ss_pred             CCCeEEEEeeCCCCHHHHHhhccccCchHHHHHHHHH----HHCCCccCCCEEEEEeccCcccChhhhcCCcHHHHHHHH
Confidence                     122356667666654321111 122232    3332    2344444444433333  2356789999999


Q ss_pred             HHHHHHHHHHHccCCeEEE-EEecCcc
Q 041276          157 NQLAKNLACEWARDNIRIN-SVAPWFI  182 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~-~i~pG~v  182 (251)
                      +.-+..+..+|+..|.+.. +|+...|
T Consensus       168 e~ta~~i~~~L~~~~G~A~vsV~KAlV  194 (237)
T PF12241_consen  168 EKTAHAINEKLAAIGGKAYVSVNKALV  194 (237)
T ss_dssp             HHHHHHHHHHHHTTT-EEEEEEE----
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEehhhh
Confidence            9999999999988776654 4555444

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=90.65  E-value=0.96  Score=37.35  Aligned_cols=31  Identities=29%  Similarity=0.485  Sum_probs=24.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+++++|+|+++++|     ..+.+.++..|.++..
T Consensus       139 ~~~~vlv~g~~~~ig-----~~~~~~~~~~g~~v~~  169 (323)
T cd05276         139 AGETVLIHGGASGVG-----TAAIQLAKALGARVIA  169 (323)
T ss_pred             CCCEEEEEcCcChHH-----HHHHHHHHHcCCEEEE
Confidence            578999999999999     6667777776666543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=90.55  E-value=5.3  Score=33.70  Aligned_cols=106  Identities=15%  Similarity=0.110  Sum_probs=54.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH---HHHHHHHHHH------------HHhcCCCcc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR---AEREKLMKQV------------SSLFNGKLN   78 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~i------------~~~~~~~id   78 (251)
                      +-++++|.|+|+ |.+|     ..++-.+...+..-..+-.|+...   ....++-+..            .+.+ ..-|
T Consensus         3 ~~~~~ki~iiGa-G~vG-----~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~-~~ad   75 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVG-----SSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDC-KDAD   75 (315)
T ss_pred             CCCCCEEEEECC-CHHH-----HHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHh-CCCC
Confidence            346789999998 9999     555555544443223344444221   1111111100            1233 5799


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSV  137 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~  137 (251)
                      ++|..+|...  .+  ..+.   .+.+..|..-.    +.+.+.+++. ..+.+++++-.
T Consensus        76 ivIitag~~~--k~--g~~R---~dll~~N~~i~----~~i~~~i~~~~~~~~vivvsNP  124 (315)
T PRK00066         76 LVVITAGAPQ--KP--GETR---LDLVEKNLKIF----KSIVGEVMASGFDGIFLVASNP  124 (315)
T ss_pred             EEEEecCCCC--CC--CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCc
Confidence            9999999753  21  1222   34455554443    4444445554 34677777643

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=90.51  E-value=0.74  Score=41.79  Aligned_cols=67  Identities=21%  Similarity=0.203  Sum_probs=42.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH----------HhcCCCccEEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS----------SLFNGKLNILIN   82 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~----------~~~~~~id~lv~   82 (251)
                      .++++|+|+|+|+ ||+|     ..++..+.+.|.++..+  +- +.+..+++.+.+.          +......|+++|
T Consensus       375 ~~~~~k~vlIlGa-GGag-----rAia~~L~~~G~~V~i~--nR-~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiIN  445 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAG-----KALAYGAKEKGARVVIA--NR-TYERAKELADAVGGQALTLADLENFHPEEGMILAN  445 (529)
T ss_pred             cCCCCCEEEEECC-cHHH-----HHHHHHHHHCCCEEEEE--cC-CHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEe
Confidence            4578999999999 5999     78888888877655443  32 3444444443321          111023578888


Q ss_pred             cccCCC
Q 041276           83 NVGTNY   88 (251)
Q Consensus        83 ~ag~~~   88 (251)
                      +.+...
T Consensus       446 tT~vGm  451 (529)
T PLN02520        446 TTSVGM  451 (529)
T ss_pred             cccCCC
Confidence            887654

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=90.38  E-value=0.93  Score=37.71  Aligned_cols=66  Identities=15%  Similarity=0.249  Sum_probs=41.7

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH------HHHHHHHhcCCCccEEEEccc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREK------LMKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~------~~~~i~~~~~~~id~lv~~ag   85 (251)
                      .++.||+++|.|. |++|     ..+++.+...|.++.++.-+-........      -++++.+.. ...|+++++..
T Consensus       147 ~~l~gk~v~IiG~-G~iG-----~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l-~~aDiVint~P  218 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTG-----MTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKV-AEIDIVINTIP  218 (287)
T ss_pred             CCCCCCEEEEEcC-hHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHh-ccCCEEEECCC
Confidence            4788999999999 5699     88888888888666554332111111100      012333444 57899999764

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=90.33  E-value=4  Score=34.58  Aligned_cols=89  Identities=12%  Similarity=0.072  Sum_probs=56.0

Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccc--------cC-C
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGV--------LS-T  143 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~--------~~-~  143 (251)
                      ..-|++|.+||...  .+  ..+   -.+.+..|+    .+.+.+.+.+.+..  .+.++++|-....        .+ .
T Consensus        77 ~daDivvitaG~~~--k~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~  145 (322)
T cd01338          77 KDADWALLVGAKPR--GP--GME---RADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDI  145 (322)
T ss_pred             CCCCEEEEeCCCCC--CC--CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCC
Confidence            67999999999753  21  222   233455554    45556666666654  5677777753322        11 4


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHcc--CCeEE
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWAR--DNIRI  174 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~--~~i~v  174 (251)
                      +....|+.++.-...|...+++.+.-  ..|+.
T Consensus       146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             ChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            44557888998999999999998753  34554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=89.77  E-value=1.7  Score=34.03  Aligned_cols=65  Identities=14%  Similarity=0.119  Sum_probs=42.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH-------HHhcCCCccEEEEcc
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV-------SSLFNGKLNILINNV   84 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i-------~~~~~~~id~lv~~a   84 (251)
                      ..+++||+++|+|.+ .+|     ..+++.+.+.|.++..  .|.. ++.+..+.+.+       .+.+..+.|+++.++
T Consensus        23 ~~~l~gk~v~I~G~G-~vG-----~~~A~~L~~~G~~Vvv--~D~~-~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A   93 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVG-----YKLAEHLLEEGAKLIV--ADIN-EEAVARAAELFGATVVAPEEIYSVDADVFAPCA   93 (200)
T ss_pred             CCCCCCCEEEEECCC-HHH-----HHHHHHHHHCCCEEEE--EcCC-HHHHHHHHHHcCCEEEcchhhccccCCEEEecc
Confidence            457899999999996 799     8899999988887764  4543 44444443331       111112577777665


Q ss_pred             c
Q 041276           85 G   85 (251)
Q Consensus        85 g   85 (251)
                      .
T Consensus        94 ~   94 (200)
T cd01075          94 L   94 (200)
T ss_pred             c
Confidence            4

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=89.66  E-value=2.8  Score=35.61  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=23.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|++|+|+|.. |+|     ....+-.+..+.++..+
T Consensus       166 pG~~V~I~G~G-GlG-----h~avQ~Aka~ga~Via~  196 (339)
T COG1064         166 PGKWVAVVGAG-GLG-----HMAVQYAKAMGAEVIAI  196 (339)
T ss_pred             CCCEEEEECCc-HHH-----HHHHHHHHHcCCeEEEE
Confidence            48999999999 999     66666666666454443

>TIGR00518 alaDH alanine dehydrogenase

Probab=89.34  E-value=2  Score=37.10  Aligned_cols=66  Identities=12%  Similarity=0.084  Sum_probs=39.2

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH-----------HHHHHhcCCCccEEEEc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM-----------KQVSSLFNGKLNILINN   83 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----------~~i~~~~~~~id~lv~~   83 (251)
                      +.++.|+|.|+ |.+|     ..+++.+...|.++..+..+....+.+...+           +.+.+.. ...|++|++
T Consensus       165 l~~~~VlViGa-G~vG-----~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-~~aDvVI~a  237 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVG-----TNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-KRADLLIGA  237 (370)
T ss_pred             CCCceEEEEcC-CHHH-----HHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-ccCCEEEEc
Confidence            56678999987 6899     7788888877766554433221112221111           2223333 578999998


Q ss_pred             ccCC
Q 041276           84 VGTN   87 (251)
Q Consensus        84 ag~~   87 (251)
                      ++..
T Consensus       238 ~~~~  241 (370)
T TIGR00518       238 VLIP  241 (370)
T ss_pred             cccC
Confidence            8653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=88.97  E-value=1.9  Score=38.65  Aligned_cols=65  Identities=14%  Similarity=0.202  Sum_probs=43.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH---------HhcCCCccEEEEc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS---------SLFNGKLNILINN   83 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~---------~~~~~~id~lv~~   83 (251)
                      .++.+|+++|+|+ ||+|     ..++..+...|.++..+  |- +.+..+++.+...         ... ...|+||++
T Consensus       328 ~~~~~k~vlIiGa-GgiG-----~aia~~L~~~G~~V~i~--~R-~~~~~~~la~~~~~~~~~~~~~~~l-~~~DiVIna  397 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAA-----KAIATTLARAGAELLIF--NR-TKAHAEALASRCQGKAFPLESLPEL-HRIDIIINC  397 (477)
T ss_pred             CCcCCCEEEEEcC-cHHH-----HHHHHHHHHCCCEEEEE--eC-CHHHHHHHHHHhccceechhHhccc-CCCCEEEEc
Confidence            4578899999996 6999     88888888877665544  32 3344444433321         113 468999999


Q ss_pred             ccCC
Q 041276           84 VGTN   87 (251)
Q Consensus        84 ag~~   87 (251)
                      ....
T Consensus       398 tP~g  401 (477)
T PRK09310        398 LPPS  401 (477)
T ss_pred             CCCC
Confidence            8654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=88.90  E-value=1.6  Score=35.60  Aligned_cols=58  Identities=19%  Similarity=0.278  Sum_probs=39.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE------------------eccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS------------------VCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~------------------~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++|||+|||+- |     ..+++.+.+.+.++...                  ..+..+.+++.+++.+      .++|.
T Consensus         1 m~ILvlGGT~e-g-----r~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~------~~i~~   68 (256)
T TIGR00715         1 MTVLLMGGTVD-S-----RAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKR------HSIDI   68 (256)
T ss_pred             CeEEEEechHH-H-----HHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHh------cCCCE
Confidence            47999999997 8     78888887666544432                  3444556665555543      57999


Q ss_pred             EEEcccCC
Q 041276           80 LINNVGTN   87 (251)
Q Consensus        80 lv~~ag~~   87 (251)
                      ||+.+..+
T Consensus        69 VIDAtHPf   76 (256)
T TIGR00715        69 LVDATHPF   76 (256)
T ss_pred             EEEcCCHH
Confidence            99988743

This enzyme was found to be a monomer by gel filtration.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=88.82  E-value=1.4  Score=38.68  Aligned_cols=67  Identities=13%  Similarity=0.178  Sum_probs=41.7

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHH--------HHHHHHhcCCCccEEEEcc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKL--------MKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~--------~~~i~~~~~~~id~lv~~a   84 (251)
                      ++.+|+|+|.|+ ||+|     ..++..+...|. ++.+..-.......+..-        +++..+.. ...|+||++.
T Consensus       178 ~l~~kkvlviGa-G~~a-----~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l-~~aDiVI~aT  250 (414)
T PRK13940        178 NISSKNVLIIGA-GQTG-----ELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLI-KKADIIIAAV  250 (414)
T ss_pred             CccCCEEEEEcC-cHHH-----HHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHh-ccCCEEEECc
Confidence            578999999998 8888     788888877763 344433322222222221        12223334 5789999999


Q ss_pred             cCC
Q 041276           85 GTN   87 (251)
Q Consensus        85 g~~   87 (251)
                      +..
T Consensus       251 ~a~  253 (414)
T PRK13940        251 NVL  253 (414)
T ss_pred             CCC
Confidence            864

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=88.71  E-value=1.5  Score=36.71  Aligned_cols=66  Identities=21%  Similarity=0.262  Sum_probs=41.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH------HHHHHHHhcCCCccEEEEccc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREK------LMKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~------~~~~i~~~~~~~id~lv~~ag   85 (251)
                      ..+.+++|+|.|. |++|     ..++..++..|.++..+.-+....+..+.      .++.+.+.. .+.|+||++++
T Consensus       148 ~~l~g~kvlViG~-G~iG-----~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l-~~aDiVI~t~p  219 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTG-----MTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEV-GKIDIIFNTIP  219 (296)
T ss_pred             CCCCCCEEEEECC-cHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHh-CCCCEEEECCC
Confidence            4567999999997 6699     78888888877665554333211111111      112333444 57999999753

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=88.60  E-value=7.8  Score=31.14  Aligned_cols=49  Identities=16%  Similarity=0.136  Sum_probs=28.5

Q ss_pred             eEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeE--EEEEe
Q 041276          130 NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR--INSVA  178 (251)
Q Consensus       130 ~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~--v~~i~  178 (251)
                      .+|...+.++.........-..+|.-...|++.++++|.+.|++  +.+|.
T Consensus       129 p~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         129 PVISSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             CEEEEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            34444444443332222333445666678899999999988875  45444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=88.34  E-value=1.6  Score=36.11  Aligned_cols=31  Identities=29%  Similarity=0.447  Sum_probs=23.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+++++|+|+++++|     ..+.+.....|.++..
T Consensus       139 ~~~~vlv~g~~~~~g-----~~~~~~a~~~g~~v~~  169 (325)
T TIGR02824       139 AGETVLIHGGASGIG-----TTAIQLAKAFGARVFT  169 (325)
T ss_pred             CCCEEEEEcCcchHH-----HHHHHHHHHcCCEEEE
Confidence            578999999999999     6666666666666544

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=88.33  E-value=3.2  Score=36.74  Aligned_cols=69  Identities=14%  Similarity=0.188  Sum_probs=45.7

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHH---------------HHHHHHHHHhcCCCc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSVCDASSRAER---------------EKLMKQVSSLFNGKL   77 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~---------------~~~~~~i~~~~~~~i   77 (251)
                      .+++.+|||+|| ||||     -++++.+.-.| ..++.+.+|--|...+               .....++..+|.+++
T Consensus         9 ai~~~riLvVGa-GGIG-----CELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~   82 (603)
T KOG2013|consen    9 AIKSGRILVVGA-GGIG-----CELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNI   82 (603)
T ss_pred             HhccCeEEEEec-Cccc-----HHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCC
Confidence            456788999987 6899     77777776554 3566665443333222               224455556675799


Q ss_pred             cEEEEcccCCC
Q 041276           78 NILINNVGTNY   88 (251)
Q Consensus        78 d~lv~~ag~~~   88 (251)
                      +++.+.+.+..
T Consensus        83 ~l~~yhanI~e   93 (603)
T KOG2013|consen   83 KLVPYHANIKE   93 (603)
T ss_pred             ceEeccccccC
Confidence            99999999876

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=88.09  E-value=0.62  Score=35.02  Aligned_cols=45  Identities=20%  Similarity=0.183  Sum_probs=32.6

Q ss_pred             CCccCCCCCCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEecc
Q 041276            1 MAQAYDHDRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCD   55 (251)
Q Consensus         1 m~~~~~~~~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D   55 (251)
                      ||++|+    -..+++||.|+|.||+. +|     ...++.+.+.+..+.++.-+
T Consensus         1 ~~~~~P----~~l~l~~~~vlVvGGG~-va-----~rka~~Ll~~ga~V~VIsp~   45 (157)
T PRK06719          1 MYNMYP----LMFNLHNKVVVIIGGGK-IA-----YRKASGLKDTGAFVTVVSPE   45 (157)
T ss_pred             CCcccc----eEEEcCCCEEEEECCCH-HH-----HHHHHHHHhCCCEEEEEcCc
Confidence            555543    34689999999999854 45     66777788888888888443

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=87.99  E-value=6.3  Score=35.25  Aligned_cols=67  Identities=16%  Similarity=0.141  Sum_probs=42.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc-----------CCCccEEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF-----------NGKLNILIN   82 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-----------~~~id~lv~   82 (251)
                      .+.+|+|+|.|+ |++|     .+++..+.+.|..+..  .|..+.+....+.+.+.+..           ....|.+|.
T Consensus        13 ~~~~~~v~viG~-G~~G-----~~~A~~L~~~G~~V~~--~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~   84 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSG-----FAAADALLELGARVTV--VDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVT   84 (480)
T ss_pred             CcCCCEEEEECC-CHHH-----HHHHHHHHHCCCEEEE--EeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEE
Confidence            467899999997 6688     6677778877776554  45444433333333333210           024788998


Q ss_pred             cccCCC
Q 041276           83 NVGTNY   88 (251)
Q Consensus        83 ~ag~~~   88 (251)
                      .+|+.+
T Consensus        85 s~Gi~~   90 (480)
T PRK01438         85 SPGWRP   90 (480)
T ss_pred             CCCcCC
Confidence            888754

>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion]

Probab=87.68  E-value=10  Score=32.18  Aligned_cols=50  Identities=22%  Similarity=0.184  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEE
Q 041276          114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS  176 (251)
Q Consensus       114 ~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~  176 (251)
                      ++....++.+..++...+|+-+|....++.         |.....|.+    ...+++|+||.
T Consensus       206 yise~y~Rk~gvRd~a~iiy~Tsl~~iFgV---------k~Y~~AL~k----~~~~rni~vn~  255 (446)
T KOG3851|consen  206 YISESYFRKRGVRDNANIIYNTSLPTIFGV---------KHYADALEK----VIQERNITVNY  255 (446)
T ss_pred             hhhHHHHHHhCccccccEEEecCccceecH---------HHHHHHHHH----HHHhcceEeee
Confidence            344555555555566789998887776443         444444444    33346777764

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=87.46  E-value=9  Score=32.34  Aligned_cols=31  Identities=23%  Similarity=0.143  Sum_probs=21.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .||++.|+|+.+ +|     .-..+-.++.|.++..+
T Consensus       181 pG~~vgI~GlGG-LG-----h~aVq~AKAMG~rV~vi  211 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LG-----HMAVQYAKAMGMRVTVI  211 (360)
T ss_pred             CCcEEEEecCcc-cc-----hHHHHHHHHhCcEEEEE
Confidence            799999999988 99     44444445555555544

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=87.25  E-value=1.8  Score=35.89  Aligned_cols=32  Identities=16%  Similarity=0.242  Sum_probs=25.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .+++++|+|+++++|     ..+.+.++..+.++...
T Consensus       144 ~~~~vli~g~~~~~g-----~~~~~~~~~~g~~v~~~  175 (328)
T cd08268         144 PGDSVLITAASSSVG-----LAAIQIANAAGATVIAT  175 (328)
T ss_pred             CCCEEEEecCccHHH-----HHHHHHHHHcCCEEEEE
Confidence            578999999999999     77777777777665444

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.96  E-value=2.3  Score=35.27  Aligned_cols=59  Identities=22%  Similarity=0.267  Sum_probs=40.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      ..+++||.|+|.|+|+-.|     ..++..+...+..+...  +- ...+       +.+.. .+.|++|++.|.
T Consensus       154 ~i~l~Gk~vvViG~gg~vG-----kpia~~L~~~gatVtv~--~~-~t~~-------L~~~~-~~aDIvI~AtG~  212 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILG-----KPMAMMLLNANATVTIC--HS-RTQN-------LPELV-KQADIIVGAVGK  212 (283)
T ss_pred             CCCCCCCEEEEECCcHHHH-----HHHHHHHHhCCCEEEEE--eC-Cchh-------HHHHh-ccCCEEEEccCC
Confidence            3478999999999998899     66777777666554433  32 1122       22223 589999999973

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]

Probab=86.71  E-value=5.6  Score=31.75  Aligned_cols=86  Identities=16%  Similarity=0.096  Sum_probs=56.9

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH--HHH--------HHH---------H-HHHHHhcCCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR--AER--------EKL---------M-KQVSSLFNGK   76 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~--------~~~---------~-~~i~~~~~~~   76 (251)
                      +++++||-|-||.|+...-..+...+...|.++..+.+|+.-.  +-+        ..+         + +.+.+.  .+
T Consensus         2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLRNLDlimGlE~RiVYd~vdVi~g~~~l~QALIkD--Kr   79 (272)
T COG2894           2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNLDLIMGLENRIVYDLVDVIEGEATLNQALIKD--KR   79 (272)
T ss_pred             ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCchhhhhhhcccceeeeeehhhhcCccchhhHhhcc--cc
Confidence            5899999999999976666677777777788888887776532  211        111         1 112221  57


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMS  106 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~  106 (251)
                      .+-++..+...  .......++|.+.+.++
T Consensus        80 ~~nL~lLPAsQ--trdKdalt~E~v~~vv~  107 (272)
T COG2894          80 LENLFLLPASQ--TRDKDALTPEGVKKVVN  107 (272)
T ss_pred             CCceEeccccc--ccCcccCCHHHHHHHHH
Confidence            88787776643  33456788888887765

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=86.52  E-value=4.1  Score=33.93  Aligned_cols=89  Identities=18%  Similarity=0.217  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE------------------eccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS------------------VCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~------------------~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|+|.||+|..|     +-+-+-.+-.|-.+...                  ..+-.++..+.+++.+   .+...|
T Consensus       153 ~geTv~VSaAsGAvG-----ql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r---~~P~GI  224 (343)
T KOG1196|consen  153 KGETVFVSAASGAVG-----QLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR---CFPEGI  224 (343)
T ss_pred             CCCEEEEeeccchhH-----HHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHH---hCCCcc
Confidence            679999999999999     33333333333222222                  1111122244444443   343579


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL  141 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~  141 (251)
                      |+.+-|+|...                           ..+.+..|+.+  |||+..+-++.+.
T Consensus       225 DiYfeNVGG~~---------------------------lDavl~nM~~~--gri~~CG~ISqYN  259 (343)
T KOG1196|consen  225 DIYFENVGGKM---------------------------LDAVLLNMNLH--GRIAVCGMISQYN  259 (343)
T ss_pred             eEEEeccCcHH---------------------------HHHHHHhhhhc--cceEeeeeehhcc
Confidence            99999998643                           34455566665  7999877666544

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=86.30  E-value=6.8  Score=33.67  Aligned_cols=26  Identities=23%  Similarity=0.189  Sum_probs=18.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      .+++|||.|+ +++|     ..+.+-.+..|.
T Consensus       191 ~g~~VlV~G~-G~vG-----~~a~~lak~~G~  216 (371)
T cd08281         191 PGQSVAVVGL-GGVG-----LSALLGAVAAGA  216 (371)
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCC
Confidence            5789999985 8999     555555555554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=86.30  E-value=0.54  Score=32.51  Aligned_cols=38  Identities=26%  Similarity=0.202  Sum_probs=28.7

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA   56 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~   56 (251)
                      +++++|.|||.|| |.+|     ...++.+.+.+.++.++.-++
T Consensus         3 l~l~~~~vlVvGg-G~va-----~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVA-----ARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHH-----HHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEECCch
Confidence            5789999999999 5555     677788888888998888777

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=86.24  E-value=5.4  Score=35.34  Aligned_cols=66  Identities=18%  Similarity=0.185  Sum_probs=40.7

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH---HHH--------HhcCCCccEEEEc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK---QVS--------SLFNGKLNILINN   83 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~i~--------~~~~~~id~lv~~   83 (251)
                      +.+|+++|+|.+ ++|     ..+++.+...|..+.....+-..+ ...++-+   .+.        ... ...|.||..
T Consensus         3 ~~~~~~~v~G~g-~~G-----~~~a~~l~~~g~~v~~~d~~~~~~-~~~~l~~~~~gi~~~~g~~~~~~~-~~~d~vv~s   74 (445)
T PRK04308          3 FQNKKILVAGLG-GTG-----ISMIAYLRKNGAEVAAYDAELKPE-RVAQIGKMFDGLVFYTGRLKDALD-NGFDILALS   74 (445)
T ss_pred             CCCCEEEEECCC-HHH-----HHHHHHHHHCCCEEEEEeCCCCch-hHHHHhhccCCcEEEeCCCCHHHH-hCCCEEEEC
Confidence            578999999986 888     677888888887766543322221 1112111   000        111 368999999


Q ss_pred             ccCCC
Q 041276           84 VGTNY   88 (251)
Q Consensus        84 ag~~~   88 (251)
                      +|+..
T Consensus        75 pgi~~   79 (445)
T PRK04308         75 PGISE   79 (445)
T ss_pred             CCCCC
Confidence            99864

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=86.22  E-value=2.2  Score=35.56  Aligned_cols=32  Identities=31%  Similarity=0.365  Sum_probs=24.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .+.+++|+|+++++|     ..+.+..+..|.++...
T Consensus       142 ~~~~vlI~g~~~~~g-----~~~~~la~~~g~~v~~~  173 (324)
T cd08244         142 PGDVVLVTAAAGGLG-----SLLVQLAKAAGATVVGA  173 (324)
T ss_pred             CCCEEEEEcCCchHH-----HHHHHHHHHCCCEEEEE
Confidence            478999999999999     66666666667665433

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=86.11  E-value=3.3  Score=35.02  Aligned_cols=31  Identities=29%  Similarity=0.416  Sum_probs=24.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|.+++|+|+++++|     ..+.+..+..|.++..
T Consensus       162 ~g~~vlI~g~~g~ig-----~~~~~~a~~~G~~v~~  192 (350)
T cd08248         162 AGKRVLILGGSGGVG-----TFAIQLLKAWGAHVTT  192 (350)
T ss_pred             CCCEEEEECCCChHH-----HHHHHHHHHCCCeEEE
Confidence            489999999999999     6666666666766544

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=85.75  E-value=1.7  Score=33.31  Aligned_cols=74  Identities=16%  Similarity=0.210  Sum_probs=46.2

Q ss_pred             CCCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH---HHHHHHhcCCCccEEEEcc
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL---MKQVSSLFNGKLNILINNV   84 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~~i~~~~~~~id~lv~~a   84 (251)
                      .......+.||+|.|.|- |.||     .++++.++..|-++.++.-...........   ...+.+.+ ...|+|+++.
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG-----~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell-~~aDiv~~~~   99 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIG-----RAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELL-AQADIVSLHL   99 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHH-----HHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHH-HH-SEEEE-S
T ss_pred             cCCCccccCCCEEEEEEE-cCCc-----CeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhc-chhhhhhhhh
Confidence            445667899999999976 7899     899999998887777665544433311110   12233333 4689998888


Q ss_pred             cCCC
Q 041276           85 GTNY   88 (251)
Q Consensus        85 g~~~   88 (251)
                      ....
T Consensus       100 plt~  103 (178)
T PF02826_consen  100 PLTP  103 (178)
T ss_dssp             SSST
T ss_pred             cccc
Confidence            7654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG

Probab=85.47  E-value=2.2  Score=35.08  Aligned_cols=45  Identities=9%  Similarity=-0.107  Sum_probs=39.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      ..|+++||++.+|.|+..-...++..+...|.++..+.+|+..+.
T Consensus       102 ~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~D~~~~~  146 (274)
T TIGR03029       102 GRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDANLRDPV  146 (274)
T ss_pred             CCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCCcc
Confidence            468999999999999777777888888888899999999998865

The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=85.12  E-value=3.2  Score=34.35  Aligned_cols=31  Identities=35%  Similarity=0.409  Sum_probs=24.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+.+++|.|+++++|     ..+.+-.+..|.++..
T Consensus       142 ~g~~vlV~ga~g~~g-----~~~~~~a~~~g~~v~~  172 (320)
T cd08243         142 PGDTLLIRGGTSSVG-----LAALKLAKALGATVTA  172 (320)
T ss_pred             CCCEEEEEcCCChHH-----HHHHHHHHHcCCEEEE
Confidence            578999999999999     6666666666666543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=85.06  E-value=5.7  Score=33.58  Aligned_cols=33  Identities=24%  Similarity=0.396  Sum_probs=26.0

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      ..+++++|.|+++++|     ..+.+..+..|.++...
T Consensus       153 ~~~~~vlI~ga~g~vg-----~~~~~~a~~~G~~v~~~  185 (339)
T cd08249         153 SKGKPVLIWGGSSSVG-----TLAIQLAKLAGYKVITT  185 (339)
T ss_pred             CCCCEEEEEcChhHHH-----HHHHHHHHHcCCeEEEE
Confidence            4689999999999999     77777777777665543

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=84.76  E-value=22  Score=29.77  Aligned_cols=103  Identities=15%  Similarity=0.130  Sum_probs=52.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHH--------------HHhcCCCccEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF--KVTGSVCDASSRAEREKLMKQV--------------SSLFNGKLNILI   81 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i--------------~~~~~~~id~lv   81 (251)
                      ++|.|.|+ |++|     ..++..+...+.  ++..+..|....+....=+++.              .+.. ...|++|
T Consensus         1 ~kI~IIGa-G~vG-----~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l-~~aDIVI   73 (306)
T cd05291           1 RKVVIIGA-GHVG-----SSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDC-KDADIVV   73 (306)
T ss_pred             CEEEEECC-CHHH-----HHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHh-CCCCEEE
Confidence            36788886 8899     666666666552  3443333222111111111010              0122 5799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccc
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVC  138 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~  138 (251)
                      +++|...  .+  ..+   -.+.+..|..    +.+...+.+++. ..+.++++|...
T Consensus        74 itag~~~--~~--g~~---R~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          74 ITAGAPQ--KP--GET---RLDLLEKNAK----IMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             EccCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecChH
Confidence            9999753  11  112   2344444544    444445555554 346777777543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=84.67  E-value=5.1  Score=33.27  Aligned_cols=64  Identities=16%  Similarity=0.123  Sum_probs=38.3

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHH---------------hcCCCc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSS---------------LFNGKL   77 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~---------------~~~~~i   77 (251)
                      ++.+|+|+|.|+ ||.|     ..++..+...+. ++..+.-|   .+..+++.+++..               .. ...
T Consensus       124 ~~~~k~vlIlGa-GGaa-----raia~aL~~~G~~~I~I~nR~---~~ka~~la~~l~~~~~~~~~~~~~~~~~~~-~~a  193 (284)
T PRK12549        124 DASLERVVQLGA-GGAG-----AAVAHALLTLGVERLTIFDVD---PARAAALADELNARFPAARATAGSDLAAAL-AAA  193 (284)
T ss_pred             CccCCEEEEECC-cHHH-----HHHHHHHHHcCCCEEEEECCC---HHHHHHHHHHHHhhCCCeEEEeccchHhhh-CCC
Confidence            567899999997 5677     666666666653 44444332   3344444444321               12 357


Q ss_pred             cEEEEcccCC
Q 041276           78 NILINNVGTN   87 (251)
Q Consensus        78 d~lv~~ag~~   87 (251)
                      |+|||+....
T Consensus       194 DiVInaTp~G  203 (284)
T PRK12549        194 DGLVHATPTG  203 (284)
T ss_pred             CEEEECCcCC
Confidence            9999996443

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=84.23  E-value=3.2  Score=33.62  Aligned_cols=38  Identities=24%  Similarity=0.185  Sum_probs=26.0

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEecc
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCD   55 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D   55 (251)
                      ...++.++|+|.|+ ||+|     ..+++.|...|. ++..+..|
T Consensus        27 Q~~L~~~~VliiG~-GglG-----s~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         27 QEKLKAARVLVVGL-GGLG-----CAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHHhcCCeEEEECC-CHHH-----HHHHHHHHHcCCCEEEEEcCC
Confidence            34568899999998 8999     666666666552 44444433

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.13  E-value=4.2  Score=33.79  Aligned_cols=59  Identities=20%  Similarity=0.272  Sum_probs=40.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      .+++||.|+|+|.|.-+|     .-++.-+...+..+...  +-.. ..+.+       .. ..-|++|..+|..
T Consensus       154 i~l~Gk~vvVIGrs~~VG-----~pla~lL~~~gatVtv~--~s~t-~~l~~-------~~-~~ADIVIsAvg~p  212 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVG-----QPVSKLLLQKNASVTIL--HSRS-KDMAS-------YL-KDADVIVSAVGKP  212 (286)
T ss_pred             CCCCCCEEEEECCCchhH-----HHHHHHHHHCCCeEEEE--eCCc-hhHHH-------HH-hhCCEEEECCCCC
Confidence            368999999999999999     66777777666555443  3222 12222       22 5799999999864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=83.95  E-value=3.3  Score=36.48  Aligned_cols=67  Identities=19%  Similarity=0.260  Sum_probs=41.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHH-------HHHHHHhcCCCccEEEEccc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSVCDASSRAEREKL-------MKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~-------~~~i~~~~~~~id~lv~~ag   85 (251)
                      .+.+++|+|.|+ |.+|     ..+++.+...| .++..+.-+......+.+-       ++...+.. ...|++|.+.+
T Consensus       177 ~l~~~~VlViGa-G~iG-----~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l-~~aDvVi~aT~  249 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMG-----ELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYL-AEADIVISSTG  249 (417)
T ss_pred             CccCCEEEEECC-hHHH-----HHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHH-hhCCEEEECCC
Confidence            478899999997 8899     77777777766 4555543332221212111       12333333 57899999977


Q ss_pred             CC
Q 041276           86 TN   87 (251)
Q Consensus        86 ~~   87 (251)
                      ..
T Consensus       250 s~  251 (417)
T TIGR01035       250 AP  251 (417)
T ss_pred             CC
Confidence            53

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=83.58  E-value=3.8  Score=33.95  Aligned_cols=65  Identities=15%  Similarity=0.209  Sum_probs=39.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHH---------------HHhcCCCc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQV---------------SSLFNGKL   77 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i---------------~~~~~~~i   77 (251)
                      ++++|.|+|.|+ ||.+     +.++..+...|. ++..+.-+   .+..+++++.+               .... ...
T Consensus       122 ~~~~k~vlvlGa-GGaa-----rai~~aL~~~G~~~i~I~nRt---~~ka~~La~~~~~~~~~~~~~~~~~~~~~~-~~~  191 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTS-----RAAVYALASLGVTDITVINRN---PDKLSRLVDLGVQVGVITRLEGDSGGLAIE-KAA  191 (282)
T ss_pred             ccCCceEEEEcC-cHHH-----HHHHHHHHHcCCCeEEEEeCC---HHHHHHHHHHhhhcCcceeccchhhhhhcc-cCC
Confidence            467899999976 7777     666677766653 45554433   33333333322               1112 457


Q ss_pred             cEEEEcccCCC
Q 041276           78 NILINNVGTNY   88 (251)
Q Consensus        78 d~lv~~ag~~~   88 (251)
                      |+|||+.....
T Consensus       192 DiVInaTp~g~  202 (282)
T TIGR01809       192 EVLVSTVPADV  202 (282)
T ss_pred             CEEEECCCCCC
Confidence            99999987654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01007 eps_fam capsular exopolysaccharide family

Probab=83.52  E-value=3.8  Score=31.95  Aligned_cols=44  Identities=14%  Similarity=0.052  Sum_probs=38.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      .|++.|+++.+|.|+..-...++..+...|.++..+.+|...+.
T Consensus        17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D~~~~~   60 (204)
T TIGR01007        17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDMRNSV   60 (204)
T ss_pred             CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCChh
Confidence            69999999999999877777888888888989999999987654

This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.

>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D

Probab=83.38  E-value=3.9  Score=30.14  Aligned_cols=45  Identities=18%  Similarity=-0.055  Sum_probs=35.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER   62 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   62 (251)
                      |++.|+|..+|.|...-...++..+...+.++.++.+|...+...
T Consensus         1 k~i~v~s~~~g~G~t~~a~~lA~~la~~~~~Vllid~~~~~~~~~   45 (157)
T PF13614_consen    1 KVIAVWSPKGGVGKTTLALNLAAALARKGKKVLLIDFDFFSPSLS   45 (157)
T ss_dssp             EEEEEEESSTTSSHHHHHHHHHHHHHHTTT-EEEEE--SSS-HHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHhcCCCeEEEECCCCCCCcc
Confidence            689999999999988888888999999888899999988877543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=83.26  E-value=3.3  Score=35.18  Aligned_cols=26  Identities=27%  Similarity=0.219  Sum_probs=18.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      .+++|+|+|+ |++|     ..+.+-++..|.
T Consensus       169 ~g~~VlV~G~-G~vG-----~~aiqlak~~G~  194 (343)
T PRK09880        169 QGKRVFVSGV-GPIG-----CLIVAAVKTLGA  194 (343)
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCC
Confidence            6899999986 8999     555555555554

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=83.25  E-value=3.9  Score=30.10  Aligned_cols=59  Identities=15%  Similarity=0.165  Sum_probs=42.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      .+++||.|+|.|.|.-.|     +.++..+..++..+  ..++-... ++++.+        ..-|+++...|..
T Consensus        24 ~~~~gk~v~VvGrs~~vG-----~pla~lL~~~gatV--~~~~~~t~-~l~~~v--------~~ADIVvsAtg~~   82 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVG-----APLQCLLQRDGATV--YSCDWKTI-QLQSKV--------HDADVVVVGSPKP   82 (140)
T ss_pred             CCCCCCEEEEECCCchHH-----HHHHHHHHHCCCEE--EEeCCCCc-CHHHHH--------hhCCEEEEecCCC
Confidence            478999999999999999     77777887776444  44443322 223322        5799999999864

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=83.17  E-value=8.6  Score=31.56  Aligned_cols=27  Identities=22%  Similarity=0.174  Sum_probs=20.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFK   48 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~   48 (251)
                      .+++|+|.|+ ++||     ..+.+-.+..|.+
T Consensus       120 ~g~~VlV~G~-G~vG-----~~~~~~ak~~G~~  146 (280)
T TIGR03366       120 KGRRVLVVGA-GMLG-----LTAAAAAAAAGAA  146 (280)
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCC
Confidence            6889999986 7899     5666666666654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=83.08  E-value=2.6  Score=37.06  Aligned_cols=65  Identities=14%  Similarity=0.189  Sum_probs=39.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH-H--HHHHHHhcCCCccEEEEccc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREK-L--MKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~--~~~i~~~~~~~id~lv~~ag   85 (251)
                      .+.||+|+|.|. |.||     ..+++.++..|.++.++..|-........ -  +..+.+.. ...|++|.+.|
T Consensus       209 ~l~Gk~VlViG~-G~IG-----~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal-~~aDVVI~aTG  276 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVG-----KGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAA-ELGDIFVTATG  276 (425)
T ss_pred             CCCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHH-hCCCEEEECCC
Confidence            478999999997 6899     88888888888776655443222111000 0  00112223 46888888765

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=82.98  E-value=5  Score=30.26  Aligned_cols=60  Identities=20%  Similarity=0.313  Sum_probs=37.3

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~   88 (251)
                      .+++||.|+|.|.|.-+|     .-++.-|...+..+..  |+... ...++.+        .+-|++|-.+|...
T Consensus        32 ~~l~Gk~v~VvGrs~~VG-----~Pla~lL~~~~atVt~--~h~~T-~~l~~~~--------~~ADIVVsa~G~~~   91 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVG-----KPLAMLLLNKGATVTI--CHSKT-KNLQEIT--------RRADIVVSAVGKPN   91 (160)
T ss_dssp             -STTT-EEEEE-TTTTTH-----HHHHHHHHHTT-EEEE--E-TTS-SSHHHHH--------TTSSEEEE-SSSTT
T ss_pred             CCCCCCEEEEECCcCCCC-----hHHHHHHHhCCCeEEe--ccCCC-Cccccee--------eeccEEeeeecccc
Confidence            468999999999999999     6666677766655544  44333 2222222        57899999998643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=82.86  E-value=13  Score=31.59  Aligned_cols=31  Identities=23%  Similarity=0.164  Sum_probs=21.5

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      ..|++|+|+|+ |++|     ..+.+-++..+.++..
T Consensus       171 ~~g~~vlI~G~-G~vG-----~~a~q~ak~~G~~vi~  201 (355)
T cd08230         171 WNPRRALVLGA-GPIG-----LLAALLLRLRGFEVYV  201 (355)
T ss_pred             CCCCEEEEECC-CHHH-----HHHHHHHHHcCCeEEE
Confidence            36889999986 8999     5555666665554433

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase

Probab=82.84  E-value=4.2  Score=31.90  Aligned_cols=44  Identities=14%  Similarity=-0.062  Sum_probs=36.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHh-cCCeeEEEeccCCCH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKT-KCFKVTGSVCDASSR   59 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~   59 (251)
                      .+|++.|+++.+|.|+..-...++..+.. .|.++..+.+|...+
T Consensus        34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~~~~   78 (207)
T TIGR03018        34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADLRRP   78 (207)
T ss_pred             CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCCCCh
Confidence            46899999999999977777778888775 588999999998764

Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.

>PLN02740 Alcohol dehydrogenase-like

Probab=82.77  E-value=5.1  Score=34.60  Aligned_cols=26  Identities=12%  Similarity=0.128  Sum_probs=19.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      .|++|||.|+ ++||     ..+.+-.+..|.
T Consensus       198 ~g~~VlV~G~-G~vG-----~~a~q~ak~~G~  223 (381)
T PLN02740        198 AGSSVAIFGL-GAVG-----LAVAEGARARGA  223 (381)
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCC
Confidence            5889999985 8999     666666666665

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=82.48  E-value=6.8  Score=33.34  Aligned_cols=69  Identities=13%  Similarity=0.112  Sum_probs=43.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      ...+.|++|.|.|. |.||     ..+++.+...|.++..+..+.............+.+.+ ..-|+|+.+....
T Consensus       141 ~~~l~g~~VgIIG~-G~IG-----~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell-~~aDiVil~lP~t  209 (330)
T PRK12480        141 SKPVKNMTVAIIGT-GRIG-----AATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAI-KDADIISLHVPAN  209 (330)
T ss_pred             ccccCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHH-hcCCEEEEeCCCc
Confidence            35789999999986 5699     88888888888777766433211111111122333444 5789998777643

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=82.47  E-value=7  Score=34.36  Aligned_cols=66  Identities=15%  Similarity=0.235  Sum_probs=40.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH-H--HHHHHhcCCCccEEEEccc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL-M--KQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~--~~i~~~~~~~id~lv~~ag   85 (251)
                      ..+.|++|+|.|+. .||     ..+++.++..|.++..+..|-...+..... +  -...+.. ...|++|.++|
T Consensus       198 ~~l~GktVvViG~G-~IG-----~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v-~~aDVVI~atG  266 (413)
T cd00401         198 VMIAGKVAVVAGYG-DVG-----KGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAV-KEGDIFVTTTG  266 (413)
T ss_pred             CCCCCCEEEEECCC-HHH-----HHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHH-cCCCEEEECCC
Confidence            35789999999986 699     788888888887766544332211111110 0  0011222 46799988776

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=82.24  E-value=4.5  Score=35.70  Aligned_cols=67  Identities=19%  Similarity=0.303  Sum_probs=38.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHH-------HHHHHHhcCCCccEEEEccc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKL-------MKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~-------~~~i~~~~~~~id~lv~~ag   85 (251)
                      ++.+++|+|.|+ |.+|     ..++..+...|. ++....-+........+.       ++...+.. ...|++|.+.|
T Consensus       179 ~~~~~~vlViGa-G~iG-----~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l-~~aDvVI~aT~  251 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMG-----ELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEAL-AEADIVISSTG  251 (423)
T ss_pred             CccCCEEEEECc-hHHH-----HHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHh-ccCCEEEECCC
Confidence            478899999987 8899     667777766654 444332221111111111       12223333 56899999887


Q ss_pred             CC
Q 041276           86 TN   87 (251)
Q Consensus        86 ~~   87 (251)
                      ..
T Consensus       252 s~  253 (423)
T PRK00045        252 AP  253 (423)
T ss_pred             CC
Confidence            53

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=82.18  E-value=5  Score=33.54  Aligned_cols=31  Identities=32%  Similarity=0.352  Sum_probs=23.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+.+++|.|+++++|     ..+.+..+..+.++..
T Consensus       139 ~~~~vlI~ga~g~ig-----~~~~~~a~~~g~~v~~  169 (329)
T cd08250         139 SGETVLVTAAAGGTG-----QFAVQLAKLAGCHVIG  169 (329)
T ss_pred             CCCEEEEEeCccHHH-----HHHHHHHHHcCCeEEE
Confidence            578999999999999     6666666666665433

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=82.16  E-value=4.5  Score=33.66  Aligned_cols=31  Identities=10%  Similarity=0.054  Sum_probs=23.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|.+|+|.|+++++|     ..+.+-.+..|.++..
T Consensus       139 ~g~~vlI~g~~g~ig-----~~~~~~a~~~G~~v~~  169 (324)
T cd08292         139 PGQWLIQNAAGGAVG-----KLVAMLAAARGINVIN  169 (324)
T ss_pred             CCCEEEEcccccHHH-----HHHHHHHHHCCCeEEE
Confidence            578999999999999     6666666666665443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []

Probab=82.13  E-value=10  Score=27.49  Aligned_cols=63  Identities=17%  Similarity=0.211  Sum_probs=38.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-----------ccCCCHHHHHHHHHHHHHhcCCCccEEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------CDASSRAEREKLMKQVSSLFNGKLNILIN   82 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-----------~D~~~~~~~~~~~~~i~~~~~~~id~lv~   82 (251)
                      .++||+++|.|--.||-.    .+..+-++..+..+.|..           .|+.+...+++    +.++| |+=+++|.
T Consensus         2 ~l~gkKviiiGdRDGiPg----pAie~c~~~~gaevvfs~TeCFVctaagaMDLEnQ~rvk~----~aEk~-g~enlvVv   72 (150)
T PF04723_consen    2 ILEGKKVIIIGDRDGIPG----PAIEECVKTAGAEVVFSSTECFVCTAAGAMDLENQQRVKD----LAEKY-GAENLVVV   72 (150)
T ss_pred             ccCCcEEEEEecCCCCCc----HHHHHHHHhcCceEEEEeeeEEEecccccccHHHHHHHHH----HHHhc-CCccEEEE
Confidence            478999999999999971    233344455566666542           24433333443    44556 77777766


Q ss_pred             ccc
Q 041276           83 NVG   85 (251)
Q Consensus        83 ~ag   85 (251)
                      .-+
T Consensus        73 lG~   75 (150)
T PF04723_consen   73 LGA   75 (150)
T ss_pred             ecC
Confidence            544

A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=82.01  E-value=6.1  Score=33.14  Aligned_cols=34  Identities=32%  Similarity=0.378  Sum_probs=26.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEec
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVC   54 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~   54 (251)
                      .+.+++|.|+++.+|     ..+.+..+..|.++.....
T Consensus       162 ~~~~vlI~g~~g~~g-----~~~~~la~~~g~~vi~~~~  195 (334)
T PRK13771        162 KGETVLVTGAGGGVG-----IHAIQVAKALGAKVIAVTS  195 (334)
T ss_pred             CCCEEEEECCCccHH-----HHHHHHHHHcCCEEEEEeC
Confidence            478999999999999     7777777777777655544

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=81.90  E-value=14  Score=29.94  Aligned_cols=43  Identities=16%  Similarity=0.053  Sum_probs=34.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      .++++|.++-||.|+......++..+...+.++..+.+|-.++
T Consensus         2 ~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~   44 (241)
T PRK13886          2 AKIHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNA   44 (241)
T ss_pred             CeEEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCc
Confidence            3789999999999977777777777877788888887776554

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=81.47  E-value=6.2  Score=32.74  Aligned_cols=60  Identities=13%  Similarity=0.186  Sum_probs=40.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~   88 (251)
                      .+++||.|+|.|.|.-+|     .-++.-+...+..+..  |+.... .+.+.+        .+-|++|-.+|...
T Consensus       153 i~l~Gk~vvVvGrs~~VG-----~Pla~lL~~~gAtVtv--~hs~t~-~l~~~~--------~~ADIvV~AvG~p~  212 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVG-----KPLAMLMLNAGASVSV--CHILTK-DLSFYT--------QNADIVCVGVGKPD  212 (285)
T ss_pred             CCCCCCEEEEECCCchhH-----HHHHHHHHHCCCEEEE--EeCCcH-HHHHHH--------HhCCEEEEecCCCC
Confidence            468999999999999999     6666666666655543  333322 222222        47899999998643

>cd05295 MDH_like Malate dehydrogenase-like

Probab=81.42  E-value=26  Score=31.20  Aligned_cols=103  Identities=14%  Similarity=0.157  Sum_probs=57.0

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc-----CCeeEEEeccCC-CHHHHHHHHHHH-----------------HHhc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK-----CFKVTGSVCDAS-SRAEREKLMKQV-----------------SSLF   73 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~-----~~~~~~~~~D~~-~~~~~~~~~~~i-----------------~~~~   73 (251)
                      .-.|+||||++-||     -.++-.+...     ...+..+-+|+. +.+..+..+-++                 .+.+
T Consensus       123 p~~V~vtgAag~i~-----Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~  197 (452)
T cd05295         123 PLQVCITNASAPLC-----YHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAF  197 (452)
T ss_pred             ceEEEEecCcHHHH-----HHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHh
Confidence            35699999999999     5665555432     235666667774 222222222111                 1233


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--ceEEEecc
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA--GNIILVSS  136 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--g~iv~vss  136 (251)
                       ...|++|..+|...  .+  ..   +-.+.++.|..    +.+...+.+.+...  -+|+.+.|
T Consensus       198 -~daDvvIitag~pr--k~--G~---~R~DLL~~N~~----Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         198 -KDAHVIVLLDDFLI--KE--GE---DLEGCIRSRVA----ICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             -CCCCEEEECCCCCC--Cc--CC---CHHHHHHHHHH----HHHHHHHHHHHhCCCCCeEEEEeC
Confidence             57899999999743  21  12   23445555554    44455555555543  45555553

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=81.40  E-value=1.9  Score=33.85  Aligned_cols=39  Identities=8%  Similarity=0.003  Sum_probs=30.6

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA   56 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~   56 (251)
                      ..++++|.|||.|| |.+|     ...++.+.+.+.++.++.-++
T Consensus         5 ~l~l~~k~vLVIGg-G~va-----~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVA-----GRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHH-----HHHHHHHHHCCCeEEEEcCCC
Confidence            45789999999998 6677     677888888888887776443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=81.10  E-value=16  Score=31.11  Aligned_cols=28  Identities=25%  Similarity=0.335  Sum_probs=21.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKV   49 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~   49 (251)
                      .+++|+|.|+ +++|     ..+.+-.+..+.++
T Consensus       166 ~g~~VlV~G~-G~vG-----~~a~~~a~~~G~~v  193 (349)
T TIGR03201       166 KGDLVIVIGA-GGVG-----GYMVQTAKAMGAAV  193 (349)
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCeE
Confidence            5899999999 9999     66666666666554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=80.85  E-value=6.4  Score=32.80  Aligned_cols=31  Identities=26%  Similarity=0.361  Sum_probs=23.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+++|+|.|+++++|     ..+.+-.+..|.++..
T Consensus       146 ~~~~vlI~g~~g~vg-----~~~~~~a~~~g~~v~~  176 (326)
T cd08289         146 EQGPVLVTGATGGVG-----SLAVSILAKLGYEVVA  176 (326)
T ss_pred             CCCEEEEEcCCchHH-----HHHHHHHHHCCCeEEE
Confidence            367999999999999     6667777776665543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=80.76  E-value=5.7  Score=34.12  Aligned_cols=30  Identities=20%  Similarity=0.273  Sum_probs=21.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~   51 (251)
                      .|.+|||+|+ ++||     ..+.+-.+..|. ++..
T Consensus       185 ~g~~VlV~G~-G~iG-----~~a~q~Ak~~G~~~Vi~  215 (368)
T TIGR02818       185 EGDTVAVFGL-GGIG-----LSVIQGARMAKASRIIA  215 (368)
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEEE
Confidence            5889999985 8999     566666666665 4443

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	251
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		6e-91
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-72
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-68
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-68
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		3e-31
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-28
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		9e-25
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-24
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-24
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-24
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-24
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		4e-24
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-23
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-23
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-23
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-23
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-23
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-23
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-23
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-23
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		8e-23
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-22
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-22
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		1e-22
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-22
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		6e-22
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-21
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		3e-21
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-21
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-21
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		3e-21
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		4e-21
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-21
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		5e-21
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		6e-21
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-21
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-21
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-20
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-20
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-20
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-20
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-20
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-20
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-20
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-20
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		3e-20
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		4e-20
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		7e-20
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-19
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		1e-19
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		2e-19
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-19
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-19
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-19
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-19
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-19
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		5e-19
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		5e-19
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		6e-19
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		7e-19
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-19
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		9e-19
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-18
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-18
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		1e-18
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-18
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-18
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-18
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-18
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		4e-18
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		4e-18
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		4e-18
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		5e-18
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		5e-18
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		7e-18
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-17
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-17
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-17
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		3e-17
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-17
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		4e-17
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		5e-17
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		7e-17
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-17
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		9e-17
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-16
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-16
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-16
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-16
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		1e-16
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-16
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-16
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-16
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-16
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-16
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-16
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-16
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		4e-16
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-16
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		5e-16
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		7e-16
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-15
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-15
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-15
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		2e-15
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-15
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		4e-15
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		4e-15
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-15
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		6e-15
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		8e-15
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-14
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-14
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-14
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-14
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-14
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-14
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-14
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-14
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		3e-14
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		5e-14
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-14
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		6e-14
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		7e-14
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		9e-14
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		9e-14
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		1e-13
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-13
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-13
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-13
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-13
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		3e-13
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		4e-13
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		4e-13
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-13
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-13
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		5e-13
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		6e-13
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		8e-13
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-13
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-12
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-12
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-12
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-12
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		5e-12
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		6e-12
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		7e-12
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		7e-12
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		8e-12
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		9e-12
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		2e-11
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-11
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		3e-11
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-11
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		3e-11
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		3e-11
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-11
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		3e-11
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		3e-11
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-11
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-11
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		4e-11
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-11
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		5e-11
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		7e-11
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		9e-11
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		1e-10
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		1e-10
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		2e-10
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-10
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-10
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		3e-10
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-10
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-10
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		5e-10
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-10
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		6e-10
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-10
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		8e-10
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		9e-10
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-09
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-09
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		3e-09
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		3e-09
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		3e-09
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		3e-09
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		3e-09
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-09
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		6e-09
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		8e-09
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-08
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-08
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-08
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-08
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		2e-08
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		2e-08
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		2e-08
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-08
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		6e-08
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		8e-08
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		8e-08
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		1e-07
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-07
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-07
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-07
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-07
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-07
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		3e-07
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		3e-07
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		4e-07
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		5e-07
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-07
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-07
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		5e-07
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-07
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		6e-07
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		7e-07
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		8e-07
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		8e-07
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		8e-07
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		9e-07
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		9e-07
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		9e-07
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		9e-07
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-06
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		1e-06
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-06
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		1e-06
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-06
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-06
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-06
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		3e-06
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		3e-06
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		3e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		4e-06
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		4e-06
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		6e-06
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		6e-06
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		6e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		7e-06
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		8e-06
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		8e-06
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		9e-06
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		9e-06
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		1e-05
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		1e-05
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-05
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-05
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-05
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-05
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-05
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-05
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-05
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-05
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		3e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		4e-05
3ek2_A	271	Crystal Structure Of Eonyl-(Acyl Carrier Protein) R		5e-05
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		6e-05
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		6e-05
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		6e-05
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-05
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		7e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		7e-05
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		8e-05
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		8e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		8e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		8e-05
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		8e-05
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		2e-04
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		2e-04
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		4e-04
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		5e-04

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  330 bits (845), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 166/261 (63%), Positives = 196/261 (75%), Gaps = 21/261 (8%)
Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
           ++  RWSL+  T LVTGGTKG+G                   NE ELNECL +W+ K F+
Sbjct: 5   EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64
Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           VTGSVCDAS R EREKLM+ VSS+F GKL+ILINN+G    +KPT++Y AED SF +STN
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA-IRSKPTLDYTAEDFSFHISTN 123
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
            ESAYHLSQLAHPLLKASG GNII +SS+ GV+S ++G+IY+ATKGA+NQLA+NLACEWA
Sbjct: 124 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 183
Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            D IR N+VAP  I TPL E    DE F + V  R P+ R GEP+EVSSLVAFLCMPAAS
Sbjct: 184 SDGIRANAVAPAVIATPLAEAVYDDE-FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 242
Query: 229 YITGQTICVDGGFTVNGFFFR 249
           YITGQTICVDGG TVNGF ++
Sbjct: 243 YITGQTICVDGGLTVNGFSYQ 263

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  268 bits (686), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 136/265 (51%), Positives = 179/265 (67%), Gaps = 28/265 (10%)
Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
           + + RWSL+G TALVTGG+KG+G                   NE EL+ECL  W+ K   
Sbjct: 12  NNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71
Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           V GSVCD  SR ER+KLM+ V+ +F+GKLNIL+NN G     K   ++  +D + +M TN
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTN 130
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           FE+AYHLSQ+A+PLLKAS  GN+I +SS+ G  +    ++Y+A+KGA+NQ+ K+LACEWA
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 169 RDNIRINSVAPWFITTPLTE------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
           +DNIR+NSVAP  I TPL E      P+  +E  ++    +TPM R G+P+EVS+L+AFL
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEE--IDNFIVKTPMGRAGKPQEVSALIAFL 248
Query: 223 CMPAASYITGQTICVDGGFTVNGFF 247
           C PAASYITGQ I  DGGFT NG F
Sbjct: 249 CFPAASYITGQIIWADGGFTANGGF 273

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/258 (50%), Positives = 171/258 (66%), Gaps = 24/258 (9%)
Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RW+L+G TALVTGG++G+G                   N+ ELN+CL +W++K FKV  S
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD SSR+ER++LM  V++ F+GKLNIL+NN G     K   +Y  ED S +MS NFE+A
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAA 121
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLS LAHP LKAS  GN++ +SSV G L+     +Y ATKGAM+QL + LA EWA+DNI
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181
Query: 173 RINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           R+N V P  I T L E  + D   ++ L ++  R  + R GEPKE++++VAFLC PAASY
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 241
Query: 230 ITGQTICVDGGFTVN-GF 246
           +TGQ I VDGG   N GF
Sbjct: 242 VTGQIIYVDGGLMANCGF 259

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/258 (50%), Positives = 171/258 (66%), Gaps = 24/258 (9%)
Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RW+L+G TALVTGG++G+G                   N+ ELN+CL +W++K FKV  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD SSR+ER++LM  V++ F+GKLNIL+NN G     K   +Y  ED S +MS NFE+A
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAA 122
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLS LAHP LKAS  GN++ +SSV G L+     +Y ATKGAM+QL + LA EWA+DNI
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182
Query: 173 RINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           R+N V P  I T L E  + D   ++ L ++  R  + R GEPKE++++VAFLC PAASY
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 242
Query: 230 ITGQTICVDGGFTVN-GF 246
           +TGQ I VDGG   N GF
Sbjct: 243 VTGQIIYVDGGLMANCGF 260

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 123/233 (52%), Gaps = 12/233 (5%)
Query: 17  GMTALVTGGTKGLGNEAELN--ECLREWKTKCFKVTGSVCDASSRAEREKL----MKQVS 70
           G   LVTGG+ G+G    +   E   E         G       R  RE+L     +++ 
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQ 70
Query: 71  SLFNG--KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA 128
            LF    +L++L+NN G +   +   EY       ++  N  +A   SQLA PLL   G 
Sbjct: 71  RLFEALPRLDVLVNNAGISRDRE---EYDLATFERVLRLNLSAAMLASQLARPLLAQRG- 126
Query: 129 GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE 188
           G+I+ ++S+     +     Y+A+KGA+ QL ++LACE+A + IR+N++AP +I TPL  
Sbjct: 127 GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGA 186
Query: 189 PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
              +D +    +  RTP+ R GE  EV+S  AFLC P AS++TG  + VDGG+
Sbjct: 187 GLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGY 239

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 25/257 (9%)
Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKV 49
           ++ + L+G  ALVTGG++GLG                   N  E +E  ++   K   + 
Sbjct: 14  KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVET 73
Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               CD S+  E +KL++ V   F GKL+ ++N  G N    P  E+  ++   ++  N 
Sbjct: 74  MAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNL 131
Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSS--VCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
              Y++ + A  LL+ S   +II + S  V  V   N+ + YAA+KG +  L K LA EW
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI-SAYAASKGGVASLTKALAKEW 190
Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
            R  IR+N +AP +  T +TE   SD + L+ +  R P+ R G P+++  +  FL    A
Sbjct: 191 GRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 250
Query: 228 SYITGQTICVDGGFTVN 244
            Y+TGQ I VDGG+T N
Sbjct: 251 KYVTGQIIFVDGGWTAN 267

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 27/256 (10%)
Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           D++SL+G  ALVTG + G+G                   N+  ++  +  +K       G
Sbjct: 28  DQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHG 87
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
            VCD +     + ++ Q+ S   G ++IL+NN G      P +E  A     ++  +  +
Sbjct: 88  YVCDVTDEDGIQAMVAQIESEV-GIIDILVNNAGI-IRRVPMIEMTAAQFRQVIDIDLNA 145
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            + +S+   P +   G G II + S+   L     + YAA KG +  L KN+A E+   N
Sbjct: 146 PFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEAN 205
Query: 172 IRINSVAPWFITTPLTEPYLSDEK------FLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           I+ N + P +I TP T P    +K      F + +  +TP  R GE +++     FL   
Sbjct: 206 IQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASD 265
Query: 226 AASYITGQTICVDGGF 241
           A++++ G  + VDGG 
Sbjct: 266 ASNFVNGHILYVDGGI 281

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV 53
           + L G TALVTG ++GLG                   + + + + ++E++          
Sbjct: 22  FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA 81
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +S +E  +   ++       ++IL+NN G  +  KP +E    D   ++ TN  SA+
Sbjct: 82  FDVTSESEIIEAFARLDEQ-GIDVDILVNNAGIQFR-KPMIELETADWQRVIDTNLTSAF 139
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            + + A   +   G G I+ + S+   L+      Y   KG +  L + +A EWA+  I+
Sbjct: 140 MIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQ 199
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
            N++ P ++ T + +  + + +F   VK RTP +R G+P+E+     FL   A+ Y+ GQ
Sbjct: 200 ANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQ 259
Query: 234 TICVDGGF 241
            I VDGG 
Sbjct: 260 IIYVDGGM 267

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 34/270 (12%)
Query: 1   MAQAYDHDRQDRWSLQGMTALVTGGTKGLG--------------------NEAELNEC-- 38
           + Q  D + +    L+G   L+TGG  G+G                     E + NE   
Sbjct: 31  LPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ 90
Query: 39  -LREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM 97
            + +   KC  + G + D   +  ++ + + V  L  G LNIL+NNV   Y  +  +EY+
Sbjct: 91  YVEKEGVKCVLLPGDLSD--EQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQ-GLEYI 145
Query: 98  -AEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGA 155
            AE L      N  S +H+++ A   LK    G++I+ ++       N   I Y+ATKGA
Sbjct: 146 TAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSATKGA 202
Query: 156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEV 215
           +    ++L+    +  IR+N VAP  I TPL  P   DEK + +     PM+RPG+P E+
Sbjct: 203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI-PSSFDEKKVSQFGSNVPMQRPGQPYEL 261
Query: 216 SSLVAFLCMPAASYITGQTICVDGGFTVNG 245
           +    +L    +SY+TGQ I V+GG  VNG
Sbjct: 262 APAYVYLASSDSSYVTGQMIHVNGGVIVNG 291

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 28/251 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------------EAELNECLREWKTKCFKVTGSVC 54
           L+G TA+VTG ++GLG                        L+    E+K     V  +  
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D  +  + E ++K     F G+++IL+NN G    T   ++   +D   +++TN +SAY 
Sbjct: 63  DVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDT-LMLKMSEKDWDDVLNTNLKSAYL 120
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            ++    ++    +G II ++S+ G++       YAA+K  +    K++A E+A   I  
Sbjct: 121 CTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 175 NSVAPWFITTPLTE--PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           N+VAP  I T +T+  P    E +L  +    P++R G P+EV+++V FL    ++YITG
Sbjct: 181 NAVAPGIIKTDMTDVLPDKVKEMYLNNI----PLKRFGTPEEVANVVGFLASDDSNYITG 236
Query: 233 QTICVDGGFTV 243
           Q I +DGG  +
Sbjct: 237 QVINIDGGLVM 247

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 24/250 (9%)
Query: 13  WSLQGMTALVTGGTKGLG----------------NEAE---LNECLREWKTKCFKVTGSV 53
           + L G TALVTG  +GLG                N+     L E +     K +   G  
Sbjct: 5   FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64
Query: 54  CDASSRAEREKLMKQVSSLFNG-KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
            D +     E    ++ +   G  ++ILINN G  Y  KP VE   E+   ++ TN  SA
Sbjct: 65  FDVTDELAIEAAFSKLDA--EGIHVDILINNAGIQYR-KPMVELELENWQKVIDTNLTSA 121
Query: 113 YHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           + +S+  A  ++  +  G II + S+    +      Y A KG +  L  ++A EWA+ N
Sbjct: 122 FLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFN 181
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I+ N++ P +I T +    + D++F   VK  TP +R G P+E+     FL   A+ YI 
Sbjct: 182 IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYIN 241
Query: 232 GQTICVDGGF 241
           GQ I VDGG+
Sbjct: 242 GQIIYVDGGW 251

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 1   MAQAYDHDRQDRWSLQGMTALVTGGTKGLG--------------------NEAELNEC-- 38
           + Q  D + +    L+G   L+TGG  G+G                     E + NE   
Sbjct: 31  LPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ 90
Query: 39  -LREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM 97
            + +   KC  + G + D   +  ++ + + V  L  G LNIL+NNV   Y  +  +EY+
Sbjct: 91  YVEKEGVKCVLLPGDLSD--EQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQ-GLEYI 145
Query: 98  -AEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGA 155
            AE L      N  S +H+++ A   LK    G++I+ ++       N   I Y+ATKGA
Sbjct: 146 TAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSATKGA 202
Query: 156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEV 215
           +    ++L+    +  IR+N VAP  I TPL  P   DEK + +     P +RPG+P E+
Sbjct: 203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI-PSSFDEKKVSQFGSNVPXQRPGQPYEL 261
Query: 216 SSLVAFLCMPAASYITGQTICVDGGFTVNG 245
           +    +L    +SY+TGQ I V+GG  VNG
Sbjct: 262 APAYVYLASSDSSYVTGQXIHVNGGVIVNG 291

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 24/247 (9%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER---------- 62
            +L+G  ALVTG ++G+G    + E L E   K      S   A + ++           
Sbjct: 8   MNLEGKVALVTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL 65
Query: 63  --------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
                   E ++K ++  F G ++IL+NN G        +    E+ S +M TN  S + 
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFR 123
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     +     G II V SV G +       YAA K  +    K++A E A   + +
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP FI T +T+  L+DE+    +  + P  R G+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKA-LNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 235 ICVDGGF 241
           + V+GG 
Sbjct: 242 LHVNGGM 248

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 22/251 (8%)
Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
           + R  L+   ALVT  T G+G                    +  ++  +   + +   VT
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66
Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
           G+VC      +RE+L+    +L  G ++IL++N   N      ++   E    ++  N +
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWAR 169
           +   +++   P ++  G G++++VSSV       NLG  Y  +K A+  L KNLA E A 
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP-YNVSKTALLGLTKNLAVELAP 184
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NIR+N +AP  I T  ++    D+   E +K    + R G P++ + +V+FLC   ASY
Sbjct: 185 RNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASY 244
Query: 230 ITGQTICVDGG 240
           ITG+T+ V GG
Sbjct: 245 ITGETVVVGGG 255

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 123/246 (50%), Gaps = 26/246 (10%)
Query: 17  GMTALVTGGTKGLGNE-------------------AELNECLR-EWKTKCFKVTGSVCDA 56
           G   L+TG +KG+G E                   AE+ + L+ E + K +K      DA
Sbjct: 29  GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA 88
Query: 57  SSRAE-REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
           +S ++  E +   V S  +G L+ L+NN G     K  ++   ED   ++  N  SA+  
Sbjct: 89  ASESDFIEAIQTIVQS--DGGLSYLVNNAGV-VRDKLAIKMKTEDFHHVIDNNLTSAFIG 145
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            + A  ++  S  G+++ V+S+ G       T Y+A+KG M  ++K+ A E A  NIR N
Sbjct: 146 CREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFN 205
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           SV P FI T +    L DE   + VK   P+ R G  KEV+  VAFL    +SYITG+T+
Sbjct: 206 SVTPGFIETDMN-ANLKDELKADYVK-NIPLNRLGSAKEVAEAVAFLLSDHSSYITGETL 263
Query: 236 CVDGGF 241
            V+GG 
Sbjct: 264 KVNGGL 269

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 32/247 (12%)
Query: 19  TALVTGGTKGLGNEAELN--------------------ECLREWKTK---CFKVTGSVCD 55
           +ALVTG ++G+G    L                       + E K K    F +  +V D
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 71
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE-DLSFLMSTNFESAYH 114
           A    E + ++K+V S F G L++L+NN G   T    +  M E +   ++ TN +  ++
Sbjct: 72  AD---EVKAMIKEVVSQF-GSLDVLVNNAG--ITRDNLLMRMKEQEWDDVIDTNLKGVFN 125
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
             Q A P +    +G II +SSV G +       Y ATK  +  L K+ A E A   I +
Sbjct: 126 CIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 185
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP FI + +T+  LSDE   E++  + P+ R G+  ++++ VAFL    A YITGQT
Sbjct: 186 NAVAPGFIVSDMTDA-LSDE-LKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT 243
Query: 235 ICVDGGF 241
           I V+GG 
Sbjct: 244 IHVNGGM 250

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 24/247 (9%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER---------- 62
            +L+G  ALVTG ++G+G    + E L E   K      S   A + ++           
Sbjct: 8   MNLEGKVALVTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL 65
Query: 63  --------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
                   E ++K ++  F G ++IL+NN G        +    E+ S +M TN  S + 
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFR 123
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     +     G II V SV G +       +AA K  +    K++A E A   + +
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP FI T +T+  L+DE+    +  + P  R G+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKA-LNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 235 ICVDGGF 241
           + V+GG 
Sbjct: 242 LHVNGGM 248

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 26/248 (10%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER---------- 62
            +L+G  ALVTG ++G+G    + E L E   K      S   A + ++           
Sbjct: 8   MNLEGKVALVTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL 65
Query: 63  --------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESAY 113
                   E ++K ++  F G ++IL+NN   + T    +  M E+  S +M TN  S +
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNN--ADITRDNLLMRMKEEEWSDIMETNLTSIF 122
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            LS+     +     G II V SV G +       YAA K  +    K++A E A   + 
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 182
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+VAP FI T +T+  L+DE+    +  + P  R G+P+E++S VAFL  P A+YITG+
Sbjct: 183 VNTVAPGFIETDMTKA-LNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEAAYITGE 240
Query: 234 TICVDGGF 241
           T+ V+GG 
Sbjct: 241 TLHVNGGM 248

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 14/234 (5%)
Query: 20  ALVTGGTKGLGNEAELNECLREWKT--------KCFKVTGSVCDASS--RAEREKLMKQV 69
           ALVTGG++G+G         R ++         +  +  G+V   +   + + + L+K+ 
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRA 64
Query: 70  SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG 129
                G L++L++    N   KP +E   E+   ++  + + A+ L+Q A P +  +G G
Sbjct: 65  LEALGG-LHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG 122
Query: 130 NIILVSSVCGVLSTNLGTI--YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT 187
            ++ + SV    +     I  Y   K A+  L + LA EWAR  IR+N + P ++ T  T
Sbjct: 123 RVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFT 182
Query: 188 EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
            P   + +  E +  R PM R   P+E++ + A LC   A Y+TGQ + VDGGF
Sbjct: 183 LPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 24/247 (9%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER---------- 62
            +L+G  ALVTG ++G+G    + E L E   K      S   A + ++           
Sbjct: 8   MNLEGKVALVTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL 65
Query: 63  --------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
                   E ++K ++  F G ++IL+NN          +    E+ S +M TN  S + 
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAAITRD-NLLMRMKEEEWSDIMETNLTSIFR 123
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     +     G II V SV G +       YAA K  +    K++A E A   + +
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP FI T +T+  L+DE+    +  + P  R G+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGFIETDMTKA-LNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 235 ICVDGGF 241
           + V+GG 
Sbjct: 242 LHVNGGM 248

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           R  L    ALVT  T G+G                    +  +++ +   + +   VTG+
Sbjct: 10  RDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGT 69
Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VC      +RE+L+     L  G ++IL++N   N      ++   E     +  N ++ 
Sbjct: 70  VCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAP 128
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             +++   P ++  G G++++VSS+     +   + Y  +K A+  L K LA E A  NI
Sbjct: 129 ALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNI 188
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N +AP  I T  +     D++  E +K    + R GEP++ + +V+FLC   ASYITG
Sbjct: 189 RVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITG 248
Query: 233 QTICVDGG 240
           +T+ V GG
Sbjct: 249 ETVVVGGG 256

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           K  G  C+ +    RE ++K     F GK+ +L+NN G     KP    M+ D  +    
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGG-GPKPFDMPMS-DFEWAFKL 118
Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           N  S + LSQLA P ++ +G G I+ +SS+ G  +      Y ++K A+N L +N+A + 
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDV 178
Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
               IR+N++AP  I T      L+ E     +K  TP+ R GE +++++   FLC PAA
Sbjct: 179 GPMGIRVNAIAPGAIKTDALATVLTPEIERAMLK-HTPLGRLGEAQDIANAALFLCSPAA 237
Query: 228 SYITGQTICVDGG 240
           ++I+GQ + V GG
Sbjct: 238 AWISGQVLTVSGG 250

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 24/247 (9%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER---------- 62
            +L+G  ALVTG ++G+G    + E L E   K      S   A + ++           
Sbjct: 8   MNLEGKVALVTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL 65
Query: 63  --------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
                   E ++K ++  F G ++IL+NN G        +    E+ S +M TN  S + 
Sbjct: 66  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRD-NLLMRMKEEEWSDIMETNLTSIFR 123
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     +     G II V SV G +       YAA K  +    K++A E A   + +
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+VAP  I T +T+  L+DE+    +  + P  R G+P+E++S VAFL  P A+YITG+T
Sbjct: 184 NTVAPGAIETDMTKA-LNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEAAYITGET 241
Query: 235 ICVDGGF 241
           + V+GG 
Sbjct: 242 LHVNGGM 248

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 65  LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
           L+ Q + +  G L+ L+NN G    T   V    ED   ++  N  + +  ++ A  L+ 
Sbjct: 70  LVHQAAEVLGG-LDTLVNNAGITRDTL-LVRMKDEDWEAVLEANLSAVFRTTREAVKLMM 127
Query: 125 ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
            +  G I+ ++SV G+L       Y A+K  +    + +A E+A+  I +N+VAP FI T
Sbjct: 128 KARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIET 187
Query: 185 PLTE--PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
            +TE  P    E +L+++    P  R G P+EV+  VAFL    A YITGQT+CVDGG T
Sbjct: 188 EMTERLPQEVKEAYLKQI----PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGLT 243

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 27/250 (10%)
Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREW-KTKCFKVTGS 52
           + LQG + +VTGGTKG+G                   + A+++ C+ +  +    KV G 
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65
Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             D S RA+ + L  +    F G ++++  N G  +   P      E L+ + + N    
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGG-IDVVCANAGV-FPDAPLATMTPEQLNGIFAVNVNGT 123
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
           ++  Q     L ASG+G ++L SS+ G ++   G + Y ATK A     +  A E A   
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183
Query: 172 IRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           I +N++ P  I   +TE  L + E+++  +    P    G P+++  L AFL    A YI
Sbjct: 184 ITVNAIMPGNI---MTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI 240
Query: 231 TGQTICVDGG 240
           TGQ I VDGG
Sbjct: 241 TGQAIAVDGG 250

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 77  LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSS 136
           ++IL+N+ G        +E        +M+ N +  +  S+     + A GAG I+ + S
Sbjct: 86  VSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGS 144
Query: 137 VCGVL--STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE 194
           + G +       + Y A+KGA++QL + LA EWA   +R+N++AP ++ T +T       
Sbjct: 145 MSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP 204
Query: 195 KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           +  E     TPM R GEP E+++   FL  PAASY+TG  + VDGG+TV
Sbjct: 205 ELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYTV 253

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 23/250 (9%)
Query: 15  LQGMTALVTGGTKGLGN--------------------EAELNECLREWKTKCFKVTGSVC 54
           L+G   ++TG + GLG                     E E N  L E K    +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  ++   L++     F GKL+++INN G       + E    D + ++ TN   A+ 
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVS-SHEMSLSDWNKVIDTNLTGAFL 122
Query: 115 LSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            S+ A    ++    G +I +SSV   +   L   YAA+KG M  + K LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIR 182
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P  I TP+     +D +   +V+   PM   GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 234 TICVDGGFTV 243
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 34/247 (13%)
Query: 19  TALVTGGTKGLGNEAELN--------------------ECLREWKTK---CFKVTGSVCD 55
           +ALVTG ++G+G    L                       + E K K    F +  +V D
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 65
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV--EYMAEDLSFLMSTNFESAY 113
           A    E +  +K+V S F G L++L+NN G    T+  +      ++   ++ TN +  +
Sbjct: 66  AD---EVKAXIKEVVSQF-GSLDVLVNNAGI---TRDNLLXRXKEQEWDDVIDTNLKGVF 118
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +  Q A P      +G II +SSV G +       Y ATK  +  L K+ A E A   I 
Sbjct: 119 NCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGIT 178
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+VAP FI +  T+  LSDE   E+   + P+ R G+  ++++ VAFL    A YITGQ
Sbjct: 179 VNAVAPGFIVSDXTDA-LSDE-LKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQ 236
Query: 234 TICVDGG 240
           TI V+GG
Sbjct: 237 TIHVNGG 243

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 28/247 (11%)
Query: 14  SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER----------- 62
           +L+G  ALVTG ++G+G    + E L E   K      S   A + ++            
Sbjct: 6   NLEGKVALVTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALN 63
Query: 63  -------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTV--EYMAEDLSFLMSTNFESAY 113
                  E ++K ++  F G ++IL+NN G    T+  +      E+ S +  TN  S +
Sbjct: 64  VTNPESIEAVLKAITDEFGG-VDILVNNAGI---TRDNLLXRXKEEEWSDIXETNLTSIF 119
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            LS+           G II V SV G         YAA K  +    K+ A E A   + 
Sbjct: 120 RLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVT 179
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+VAP FI T  T+  L+DE+    +  + P  R G+P+E++S VAFL  P A+YITG+
Sbjct: 180 VNTVAPGFIETDXTKA-LNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEAAYITGE 237
Query: 234 TICVDGG 240
           T+ V+GG
Sbjct: 238 TLHVNGG 244

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 28/251 (11%)
Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+G  ALVTG ++G+G                    NE + NE + E K           
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV--EYMAEDLSFLMSTNFESA 112
           D ++  +   ++KQ   +F G+++IL+NN G    TK  +      E+   +++TN +  
Sbjct: 62  DVANAEDVTNMVKQTVDVF-GQVDILVNNAGV---TKDNLLMRMKEEEWDTVINTNLKGV 117
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           +  ++     +     G I+ ++SV GV        Y A K  +  L K  A E A  NI
Sbjct: 118 FLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNI 177
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N++AP FI T +T+  + DE    E+    P  + GE +++++ V F     + YITG
Sbjct: 178 TVNAIAPGFIATDMTD--VLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITG 235
Query: 233 QTICVDGGFTV 243
           QT+ VDGG  +
Sbjct: 236 QTLNVDGGMVM 246

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 23/250 (9%)
Query: 15  LQGMTALVTGGTKGLGN--------------------EAELNECLREWKTKCFKVTGSVC 54
           L+G   ++TG + GLG                     E E N  L E K    +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  ++   L++     F GKL+++INN G       + E    D + ++ TN   A+ 
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVS-SHEMSLSDWNKVIDTNLTGAFL 122
Query: 115 LSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            S+ A    ++    G +I +SSV   +   L   YAA+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P  I TP+     +D +   +V+   PM   GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 234 TICVDGGFTV 243
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 15  LQGMTALVTGGTKGLGN--------------------EAELNECLREWKTKCFKVTGSVC 54
           L+G   ++TG + GLG                     E E N  L E K    +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  ++   L++     F GKL+++INN G       + E    D + ++ TN   A+ 
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVS-SHEMSLSDWNKVIDTNLTGAFL 122
Query: 115 LSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            S+ A    ++    G +I +SSV   +   L   YAA+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P  I TP+     +D +   +V+   PM   GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 234 TICVDGGFT 242
           T+  DGG T
Sbjct: 243 TLFADGGMT 251

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 29/250 (11%)
Query: 14  SLQGMTALVTGGTKGLGNEAELNECLR-------------------EWKTKCFKVTGSVC 54
           +L    A+VTG ++G+G    L    R                    +K    +  G+V 
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESAY 113
           + +     + L++     F G LN+L+NN G   T       M +D    ++ TN ++ +
Sbjct: 85  NVNDATAVDALVESTLKEF-GALNVLVNNAG--ITQDQLAMRMKDDEWDAVIDTNLKAVF 141
Query: 114 HLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDN 171
            LS+ +  P++KA G G I+ ++SV G  + N G + YAA K  +  + + LA E     
Sbjct: 142 RLSRAVLRPMMKARG-GRIVNITSVVGS-AGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N VAP FI T +T+    +++    +K + P+ R G P++++  VAFL  P A YIT
Sbjct: 200 ITVNCVAPGFIDTDMTKGLPQEQQ--TALKTQIPLGRLGSPEDIAHAVAFLASPQAGYIT 257
Query: 232 GQTICVDGGF 241
           G T+ V+GG 
Sbjct: 258 GTTLHVNGGM 267

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 15  LQGMTALVTGGTKGLGN--------------------EAELNECLREWKTKCFKVTGSVC 54
           L+G   ++TG + GLG                     E E N  L E K    +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  ++   L++     F GKL+++INN G       + E    D + ++ TN   A+ 
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLANPVS-SHEMSLSDWNKVIDTNLTGAFL 122
Query: 115 LSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            S+ A    ++    G +I +SSV   +   L   YAA+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P  I TP+     +D +   +V+   PM   GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242
Query: 234 TICVDGGFT 242
           T+  DGG T
Sbjct: 243 TLFADGGMT 251

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 25/250 (10%)
Query: 11  DRWSLQGMTALVTGGTKGLGNEAEL-------------------NECLREWKTKCFKVTG 51
           D   L G  A++TG   G+G E  +                   N  + E +    +   
Sbjct: 5   DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA 64
Query: 52  SVCDASSRAEREKLMK-QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
             CD +S  E   L    +S L  GK++IL+NN G     KP    MA D       N  
Sbjct: 65  CRCDITSEQELSALADFAISKL--GKVDILVNNAGGG-GPKPFDMPMA-DFRRAYELNVF 120
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           S +HLSQL  P ++ +G G I+ ++S+         T YA++K A + L +N+A +    
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180
Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           NIR+N +AP  I T   +  ++ E   +++   TP+ R G+P+++++   FLC PAAS++
Sbjct: 181 NIRVNGIAPGAILTDALKSVITPE-IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWV 239
Query: 231 TGQTICVDGG 240
           +GQ + V GG
Sbjct: 240 SGQILTVSGG 249

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 28/251 (11%)
Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV 53
           + L G  ALVTG T GLG                    E +L E   E   + F    ++
Sbjct: 3   FDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANL 62
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D     E  K + Q +    G ++IL+NN G        V    ED   +++ N  S +
Sbjct: 63  SDR----EAVKALGQKAEEEMGGVDILVNNAGITRD-GLFVRMSDEDWDAVLTVNLTSVF 117
Query: 114 HLS-QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           +L+ +L HP+++    G II ++S+ GV        Y A+K  +   +K+LA E A  N+
Sbjct: 118 NLTRELTHPMMRRRN-GRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 176
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N +AP FI + +T     +EK  + +    PM+R G   ++++ V +L    A+Y+TG
Sbjct: 177 TVNCIAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTG 234
Query: 233 QTICVDGGFTV 243
           QT+ V+GG  +
Sbjct: 235 QTLHVNGGMAM 245

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 28/251 (11%)
Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV 53
           + L G  ALVTG T GLG                    E +L E   E   + F    ++
Sbjct: 6   FDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANL 65
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D     E  K + Q +    G ++IL+NN G        V    ED   +++ N  S +
Sbjct: 66  SDR----EAVKALGQKAEEEMGGVDILVNNAGITRD-GLFVRMSDEDWDAVLTVNLTSVF 120
Query: 114 HLS-QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           +L+ +L HP+++    G II ++S+ GV        Y A+K  +   +K+LA E A  N+
Sbjct: 121 NLTRELTHPMMRRRN-GRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 179
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N +AP FI + +T     +EK  + +    PM+R G   ++++ V +L    A+Y+TG
Sbjct: 180 TVNCIAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTG 237
Query: 233 QTICVDGGFTV 243
           QT+ V+GG  +
Sbjct: 238 QTLHVNGGMAM 248

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 35/255 (13%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECL----------REWK---------------TKCFKV 49
           LQG  A+VTGG  G+G +A + E L          R+ +               TK  +V
Sbjct: 16  LQGQVAIVTGGATGIG-KAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               C+  +  E   L+K     F GK+N L+NN G  + + P     ++    ++ TN 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLS-PAEHISSKGWHAVLETNL 132
Query: 110 ESAYHLSQLAHPLLKASGAGNI--ILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
              +++ +  +        G+I  I+V +  G     L     A +  +  L K+LA EW
Sbjct: 133 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLTKSLALEW 189
Query: 168 ARDNIRINSVAPWFI-TTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           A   IRIN VAP  I +    E Y S  + F E    + P +R G P+EVSS+V FL  P
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP 249
Query: 226 AASYITGQTICVDGG 240
           AAS+ITGQ++ VDGG
Sbjct: 250 AASFITGQSVDVDGG 264

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 23/250 (9%)
Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L+    ++TGG+ GLG                    NE E  +  +E +    +     
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQ 71
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +   +   L++     F G L+++INN G      P+ E   ++ + ++ TN   A+
Sbjct: 72  GDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPV-PSHELSLDNWNKVIDTNLTGAF 129
Query: 114 HLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             S+ A    ++    GN+I +SSV  ++   L   YAA+KG M  + + LA E+A   I
Sbjct: 130 LGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 189
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N++ P  + TP+     +D     +V+   PM   G+P+EV+++ AFL    ASY+TG
Sbjct: 190 RVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTG 249
Query: 233 QTICVDGGFT 242
            T+  DGG T
Sbjct: 250 ITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 23/250 (9%)
Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L+    ++TGG+ GLG                    NE E  +  +E +    +     
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQ 71
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +   +   L++     F G L+++INN G      P+ E   ++ + ++ TN   A+
Sbjct: 72  GDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPV-PSHELSLDNWNKVIDTNLTGAF 129
Query: 114 HLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             S+ A    ++    GN+I +SSV  ++   L   YAA+KG M  + + LA E+A   I
Sbjct: 130 LGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 189
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N++ P  + TP+     +D     +V+   PM   G+P+EV+++ AFL    ASY+TG
Sbjct: 190 RVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTG 249
Query: 233 QTICVDGGFT 242
            T+  DGG T
Sbjct: 250 ITLFADGGMT 259

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD +   + E+  K++    +G + +LI N G     +  +    ED + ++ TN    +
Sbjct: 66  CDITDTEQVEQAYKEIEET-HGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTF 123
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            + + A+  +  +  G ++L+SSV G+L +     YAA+K  +   A++LA E    NI 
Sbjct: 124 RVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNIT 183
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
            N VAP F+ T +T+  L+DE+    +  + P+ R   P+E+++ V FL    ASYITG 
Sbjct: 184 FNVVAPGFVDTDMTK-VLTDEQ-RANIVSQVPLGRYARPEEIAATVRFLASDDASYITGA 241
Query: 234 TICVDGGF 241
            I VDGG 
Sbjct: 242 VIPVDGGL 249

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 23/250 (9%)
Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L+    ++TGG+ GLG                    NE E  +  +E +    +     
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQ 71
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +   +   L++     F G L+++INN G      P+ E   ++ + ++ TN   A+
Sbjct: 72  GDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPV-PSHELSLDNWNKVIDTNLTGAF 129
Query: 114 HLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             S+ A    ++    GN+I +SSV  ++   L   YAA+KG M  + + LA E+A   I
Sbjct: 130 LGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 189
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N++ P  + TP+     +D     +V+   PM   G+P+EV+++ AFL    ASY+TG
Sbjct: 190 RVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTG 249
Query: 233 QTICVDGGFT 242
            T+  DGG T
Sbjct: 250 ITLFADGGMT 259

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 25/252 (9%)
Query: 13  WSLQGMTALVTGGTKGLGN---------EAELNECLREWKTKCFKVT---------GSVC 54
           +SL G  ALVTGG++G+G           A +  C R+ +      T             
Sbjct: 25  FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPA 84
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D SS A   +L + +  L + +L+IL+NN GT++       Y       +M  N  S + 
Sbjct: 85  DLSSEAGARRLAQALGEL-SARLDILVNNAGTSWGAA-LESYPVSGWEKVMQLNVTSVFS 142
Query: 115 LSQLAHPLLKASGAG----NIILVSSVCGVLSTN-LGTIYAATKGAMNQLAKNLACEWAR 169
             Q   PLL+ S +      +I + SV G+ +       Y  +K A++QL++ LA E   
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           ++I +N +AP    + +T    +D + LE      PM R G P+E+++L   L   A +Y
Sbjct: 203 EHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAY 262
Query: 230 ITGQTICVDGGF 241
           +TG  I +DGGF
Sbjct: 263 MTGNVIPIDGGF 274

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 8/191 (4%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  +E E L   V   + G+L++L+NN G    T   +    +D   ++  N    +
Sbjct: 85  ADVSQESEVEALFAAVIERW-GRLDVLVNNAGITRDTL-LLRMKRDDWQSVLDLNLGGVF 142
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
             S+ A  ++    +G II ++SV G +       Y+A K  +  L K +A E A   I 
Sbjct: 143 LCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGIT 202
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAASYITG 232
           +N+VAP FI T +T   L+ EK LE +    P+ R GE  EV+ +V FL   PAA+YITG
Sbjct: 203 VNAVAPGFIATDMTSE-LAAEKLLEVI----PLGRYGEAAEVAGVVRFLAADPAAAYITG 257
Query: 233 QTICVDGGFTV 243
           Q I +DGG  +
Sbjct: 258 QVINIDGGLVM 268

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 24/247 (9%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVC 54
            + +G  ALVTG ++G+G    + E L     K                       G + 
Sbjct: 1   MNFEGKIALVTGASRGIGR--AIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML 58
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           + +  A  E +++++ + F G+++IL+NN G        +    E+ + ++ TN  S + 
Sbjct: 59  NVTDPASIESVLEKIRAEF-GEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFR 116
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     +     G II + SV G +       YAA K  +   +K+LA E A   I +
Sbjct: 117 LSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITV 176
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N VAP FI T +T     D++    +  + P  R G  +E+++ VAFL    A+YITG+T
Sbjct: 177 NVVAPGFIETDMTRALSDDQR--AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 234
Query: 235 ICVDGGF 241
           + V+GG 
Sbjct: 235 LHVNGGM 241

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 14  SLQGMTALVTGGTKGLGNE-----AELNECLREW-KTKCFK-VTGSVCDASSRAEREKLM 66
           SL G TA+VTG   G+G       A     +  W +T   K V   + D    AE   ++
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAE--AVV 85
Query: 67  KQVSSLFNG-----------KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
             ++ L              ++++L+NN G      P  E        +++ N ++A+ L
Sbjct: 86  ADLADLEGAANVAEELAATRRVDVLVNNAGI-IARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           S+     + A G+G I+ ++S+           YAA+K A+  L + LA EWA   + +N
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           ++AP ++ T  T    +D++   E+  R P  R   P+++     FL   AASY+ GQ +
Sbjct: 205 ALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVL 264
Query: 236 CVDGGF 241
            VDGG+
Sbjct: 265 AVDGGW 270

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 28/247 (11%)
Query: 21  LVTGGTKGLGNEAEL---------------NECLREWKTKCF------KVTGSVCDASSR 59
           L+TGG  GLG    +               +E L   K          +V  +V D S  
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76
Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
           A+ E  +   +  F G+++   NN G      PT  + A +   ++S N    +   +  
Sbjct: 77  AQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV 135
Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
             +++  G+G ++  +SV G+      + YAA K  +  L +N A E+ R  IRIN++AP
Sbjct: 136 LKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP 195
Query: 180 WFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
             I TP+ E  +         K  EE     P +R GE  E++++VAFL    ASY+   
Sbjct: 196 GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNAT 255
Query: 234 TICVDGG 240
            + +DGG
Sbjct: 256 VVPIDGG 262

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 24/247 (9%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVC 54
            + +G  ALVTG ++G+G    + E L     K                       G + 
Sbjct: 1   MNFEGKIALVTGASRGIGR--AIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML 58
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           + +  A  E +++++ + F G+++IL+NN G        +    E+ + ++ TN  S + 
Sbjct: 59  NVTDPASIESVLEKIRAEF-GEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFR 116
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+     +     G II + SV G +       +AA K  +   +K+LA E A   I +
Sbjct: 117 LSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITV 176
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N VAP FI T +T     D++    +  + P  R G  +E+++ VAFL    A+YITG+T
Sbjct: 177 NVVAPGFIETDMTRALSDDQR--AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 234
Query: 235 ICVDGGF 241
           + V+GG 
Sbjct: 235 LHVNGGM 241

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 116/257 (45%), Gaps = 32/257 (12%)
Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVC 54
           + G  A++TG + G+G                       L+E  R  K K   +V     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D ++    + +++ V S F G  +IL+NN GT  + +  +E   E   F    +  +A  
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTG-SNETIMEAADEKWQFYWELHVMAAVR 122
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L++   P ++A G G II  +S+C V       IY  TK A+   +K LA E  +DNIR+
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182
Query: 175 NSVAPWFITTP--------LTEPYLSDEK-FLEEVKC-RTPMERPGEPKEVSSLVAFLCM 224
           N + P  I TP        LT+    D K +L+ V     P++R   P+E+++   FLC 
Sbjct: 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS 242
Query: 225 PAASYITGQTICVDGGF 241
             A+Y  G    VDGG 
Sbjct: 243 ERATYSVGSAYFVDGGM 259

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 29/250 (11%)
Query: 14  SLQGMTALVTGGTKGLGNEAELN------------------ECLRE-WKTKCFKVTGSVC 54
           SLQG  ALVTG ++G+G    L                   E + E  K    +  G V 
Sbjct: 24  SLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVL 83
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-LMSTNFESAY 113
           D SS       ++ +       L I++NN G   T    +  M +D  F +++TN  S Y
Sbjct: 84  DVSSDESVAATLEHIQQHLGQPL-IVVNNAG--ITRDNLLVRMKDDEWFDVVNTNLNSLY 140
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            LS+     +  +  G II + SV G +     T YAA K  +    + LA E     I 
Sbjct: 141 RLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAIT 200
Query: 174 INSVAPWFITTPLTE--PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +N+VAP FI T +T   P    E  L ++    P+ R G+ +E++ +V FL    A+Y+T
Sbjct: 201 VNAVAPGFIDTDMTRELPEAQREALLGQI----PLGRLGQAEEIAKVVGFLASDGAAYVT 256
Query: 232 GQTICVDGGF 241
           G T+ V+GG 
Sbjct: 257 GATVPVNGGM 266

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 32/251 (12%)
Query: 15  LQGMTALVTGGTKGLGN-----------------------EAELNECLREWKTKCFKVTG 51
           LQG  +LVTG T+G+G                        +A   E   ++  K   V  
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           ++    S     K  +++ +L +G ++IL+NN G     K  +     D   ++  N   
Sbjct: 65  NLLSEESI---NKAFEEIYNLVDG-IDILVNNAGITRD-KLFLRMSLLDWEEVLKVNLTG 119
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARD 170
            + ++Q +   +     G I+ +SSV G  + N+G + Y+ TK  +    K+LA E A  
Sbjct: 120 TFLVTQNSLRKMIKQRWGRIVNISSVVG-FTGNVGQVNYSTTKAGLIGFTKSLAKELAPR 178
Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           N+ +N+VAP FI T +T   LS+E   ++ K + P+ R G P+EV+++V FLC   ASYI
Sbjct: 179 NVLVNAVAPGFIETDMT-AVLSEE-IKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYI 236
Query: 231 TGQTICVDGGF 241
           TG+ I V+GG 
Sbjct: 237 TGEVIHVNGGM 247

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 32/263 (12%)
Query: 7   HDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF 47
           H   ++  L    A+VTGG + +G                   +EA   + + + + +  
Sbjct: 3   HMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH 62
Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS----- 102
            V+  V D ++    +  ++ V     G+++IL+   G   +     E  AED++     
Sbjct: 63  DVSSVVMDVTNTESVQNAVRSVHEQ-EGRVDILVACAGICIS-----EVKAEDMTDGQWL 116
Query: 103 FLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--NLGTIYAATKGAMNQLA 160
             +  N    +   Q    ++     G I+ + S+ G++         Y A+K  ++Q  
Sbjct: 117 KQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYI 176
Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA 220
           ++LA EWA   IR N+VAP +I T LT   +   +  +     TPM R G+P EV+S+V 
Sbjct: 177 RSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQ 236
Query: 221 FLCMPAASYITGQTICVDGGFTV 243
           FL   AAS +TG  + VD GFTV
Sbjct: 237 FLASDAASLMTGAIVNVDAGFTV 259

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 27/254 (10%)
Query: 11  DRWSLQGMTALVTGGTKGLGNEAEL---------------NECLREWKTKCFKVTGSV-- 53
           D + L G  AL+TG + G+G +  L               ++ L+    +   V G    
Sbjct: 26  DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP 85
Query: 54  --CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
             CD +   +   ++ Q++    G ++I + N G   + +  ++   E+   +  TN   
Sbjct: 86  IRCDVTQPDQVRGMLDQMTGELGG-IDIAVCNAGI-VSVQAMLDMPLEEFQRIQDTNVTG 143
Query: 112 AYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTI--YAATKGAMNQLAKNLACEWA 168
            +  +Q A   +   G  G II  +S+ G +      +  Y  +K A+  L K +A E A
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA 203
Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              IR+NSV+P +I T L EP L+D   L E K   P+ R G P+E++ L  +L   A+S
Sbjct: 204 PHQIRVNSVSPGYIRTELVEP-LADYHALWEPKI--PLGRMGRPEELTGLYLYLASAASS 260
Query: 229 YITGQTICVDGGFT 242
           Y+TG  I +DGG+T
Sbjct: 261 YMTGSDIVIDGGYT 274

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTK--- 139
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 199
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 200 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 259
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 260 AAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTK--- 143
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 204 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 263
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 264 AAAVTAQALNVCGGL 278

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 32/257 (12%)
Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVC 54
           + G  A++TG + G+G                       L+E  R  K K   +V     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D ++    + +++ V S F G  +IL+NN GT  + +  +E   E   F       +A  
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVR 122
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L++   P ++A G G II  +S+C V       IY  TK A+   +K LA E  +DNIR+
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182
Query: 175 NSVAPWFITTP--------LTEPYLSDEK-FLEEVKC-RTPMERPGEPKEVSSLVAFLCM 224
           N + P  I TP        LT+    D K +L+ V     P++R   P+E+++   FLC 
Sbjct: 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS 242
Query: 225 PAASYITGQTICVDGGF 241
             A+Y  G    VDGG 
Sbjct: 243 ERATYSVGSAYFVDGGM 259

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTK--- 143
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 204 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 263
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 264 AAAVTAQALNVCGGL 278

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTK--- 139
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 199
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 200 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 259
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 260 AAAVTAQALNVCGGL 274

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 69  EIEALVAAVVERY-GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTK--- 123
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 124 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 183
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 184 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 243
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 244 AAAVTAQALNVCGGL 258

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 112/247 (45%), Gaps = 25/247 (10%)
Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL    ALVTG ++G+G                   ++A   +     K K FK  G V 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVL 61
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED-LSFLMSTNFESAY 113
           + S     +    ++ +  N  ++IL+NN G   T        +ED    +++TN  S +
Sbjct: 62  NISDIESIQNFFAEIKAE-NLAIDILVNNAG--ITRDNLXXRXSEDEWQSVINTNLSSIF 118
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
             S+           G II + SV G       T Y A K  +   +K+LA E A  NI 
Sbjct: 119 RXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNIT 178
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N VAP FI T  T+    ++K    +  + P  + GEPK++++ VAFL    A YITGQ
Sbjct: 179 VNVVAPGFIATDXTDKLTDEQKSF--IATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQ 236
Query: 234 TICVDGG 240
           T+ V+GG
Sbjct: 237 TLHVNGG 243

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTK--- 143
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 204 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 263
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 264 AAAVTAQALNVCGGL 278

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTK--- 143
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 176 SVAPWFITTPL---TEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+      + SD      E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 204 AVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 263
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 264 AAAVTAQALNVCGGL 278

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 7/191 (3%)
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  A+ E +MK     + G +++++NN G    T   +         ++  N    + 
Sbjct: 59  DVSKEADVEAMMKTAIDAW-GTIDVVVNNAGITRDT-LLIRMKKSQWDEVIDLNLTGVFL 116
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIR 173
            +Q A  ++     G II ++SV G++  N+G   YAA K  +   +K  A E A  NI 
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIG-NIGQANYAAAKAGVIGFSKTAAREGASRNIN 175
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAASYITG 232
           +N V P FI + +T      E   +++    P+ R G+P+ V+ LV FL + PAASYITG
Sbjct: 176 VNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITG 233
Query: 233 QTICVDGGFTV 243
           Q   +DGG  +
Sbjct: 234 QAFTIDGGIAI 244

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 20/244 (8%)
Query: 15  LQGMTALVTGGTKGLGNEAE-----------LNECLREWKTKCFKVTGSVC-----DASS 58
           L G T ++TGG +GLG EA            L + L E      +  G        D + 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
             + ++++      F G ++ L+NN G +       E + E    ++  N    +   + 
Sbjct: 63  EEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESV-ERFRKVVEINLTGVFIGMKT 120
Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
             P +K +G G+I+ +SS  G++   L + Y A+K  +  L+K  A E   D IR+NSV 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180
Query: 179 PWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD 238
           P    TP+T    +  +  E     TPM R GEP E++  V  L    +SY+TG  + VD
Sbjct: 181 PGMTYTPMTAE--TGIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDTSSYVTGAELAVD 238
Query: 239 GGFT 242
           GG+T
Sbjct: 239 GGWT 242

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 44/259 (16%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS- 71
           + L G  ALVTG T G+G          E   +CF   G++        RE  +K++++ 
Sbjct: 23  FKLTGRKALVTGATGGIG----------EAIARCFHAQGAIV--GLHGTREDKLKEIAAD 70
Query: 72  ------LFNGKL--------------------NILINNVGTNYTTKPTVEYMAEDLSFLM 105
                 +F+  L                    +IL+NN G        V    +D   ++
Sbjct: 71  LGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRD-GLFVRMQDQDWDDVL 129
Query: 106 STNFESAYHLS-QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA 164
           + N  +A  L+ +L H +++    G II ++S+ GV+     T Y A K  +   +K LA
Sbjct: 130 AVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALA 188
Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            E A  NI +N +AP FI + +T+    +EK  E +    PM+R G  +E++    +L  
Sbjct: 189 QEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLAS 246
Query: 225 PAASYITGQTICVDGGFTV 243
             A+Y+TGQT+ ++GG  +
Sbjct: 247 DEAAYLTGQTLHINGGMAM 265

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED-LSFLMSTNFESAYHLS 116
           +RA R  L++QV + F+   +++++  G   T    + +M+ED    +++ N +  + ++
Sbjct: 75  ARAAR-CLLEQVQACFSRPPSVVVSCAG--ITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 131
Query: 117 QLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           Q A   L ++G  G+II +SS+ G +     T YAA+K  +  L +  A E  R  IR N
Sbjct: 132 QAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCN 191
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           SV P FI TP+T+     +K ++++    PM   G+P++V+ +VAFL    + YITG ++
Sbjct: 192 SVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSV 249
Query: 236 CVDGG-FTVNGFFFR 249
            V GG F     +F+
Sbjct: 250 EVTGGLFMAENLYFQ 264

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 30/246 (12%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-------------------VCD 55
           L G T+L+TG + G+G  + +   L +  +K   ++GS                   VC+
Sbjct: 12  LTGKTSLITGASSGIG--SAIARLLHKLGSKVI-ISGSNEEKLKSLGNALKDNYTIEVCN 68
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +++ E   L+ + S+L     +IL+ N G    T   +    +D   ++  N ++ + L
Sbjct: 69  LANKEECSNLISKTSNL-----DILVCNAGITSDT-LAIRMKDQDFDKVIDINLKANFIL 122
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++ A   +     G II +SS+ G+        Y A+K  +  + K+L+ E A   I +N
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +VAP FI + +T+    +EK  E +  + P+   G P++V+  VAFL    ASYITGQT+
Sbjct: 183 AVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTL 240
Query: 236 CVDGGF 241
            V+GG 
Sbjct: 241 HVNGGM 246

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 35  LNECLR-EWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT 93
           L E  R  W     KV     D +   +    +      F G +++L+NN G    ++  
Sbjct: 39  LEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAG 97
Query: 94  VEYM--AEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA 151
           V +    E    +M+ N    +   +   P +   GAG I+ ++SV  +++    + Y  
Sbjct: 98  VLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTT 157
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
           +KGA+ QL K++A ++A   IR N+V P  I TP+T+  L   +  ++V  R P +  G 
Sbjct: 158 SKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGT 217
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
             +V+  V FL    A+Y+ G  + +DG +T
Sbjct: 218 AAQVADAVMFLAGEDATYVNGAALVMDGAYT 248

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 20  ALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           ALVTG T G+G                    E  L   L+E +    +  G  CD  S  
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++   
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTK--- 143
Query: 121 PLLKASG-----AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +LKA G      G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 176 SVAPWFITTPLT----EPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P ++ TP+     E Y     +S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 204 AVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 263
Query: 227 ASYITGQTICVDGGF 241
           A+ +T Q + V GG 
Sbjct: 264 AAAVTAQALNVCGGL 278

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 17/244 (6%)
Query: 17  GMTALVTGGTKGLGNE-----------AELNECLREWKTKCFKVTGSVCDASSRAEREKL 65
           G   LVTGG +G+G               L +   E K     + G+        ERE++
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERV 65
Query: 66  -MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
              + ++   G++++L+NN             + E    ++  N  +  HLS LA   ++
Sbjct: 66  RFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAAREMR 124
Query: 125 ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
             G G I+ V+SV G+ +      Y A+KG +  L ++LA + A   IR+N+VAP  I T
Sbjct: 125 KVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIAT 184
Query: 185 PLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
                 ++     E+   + +    + R G+P+EV+  V FL    AS+ITG  + VDGG
Sbjct: 185 EAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG 244
Query: 241 FTVN 244
            T +
Sbjct: 245 MTAS 248

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 27/245 (11%)
Query: 19  TALVTGGTKGLGNE-------------------AELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTG  +G+G E                      +  + E K+  ++ +G   D S +
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105
Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESAYHLSQL 118
            E  +++ ++ +     ++IL+NN G   T       M  D    ++ TN  S ++++Q 
Sbjct: 106 EEISEVINKILTEHK-NVDILVNNAGI--TRDNLFLRMKNDEWEDVLRTNLNSLFYITQP 162
Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIRINSV 177
               +  +  G II +SS+ G L+ N+G   Y+++K  +    K+LA E A  NI +N++
Sbjct: 163 ISKRMINNRYGRIINISSIVG-LTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI 221
Query: 178 APWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
           AP FI++ +T+     E+  + +    P  R G P+EV++L  FL    + YI G+   +
Sbjct: 222 APGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVI 279
Query: 238 DGGFT 242
           DGG +
Sbjct: 280 DGGLS 284

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 19  TALVTGGTKGLG-------NEAELNECLR------EWKTKCFKVTG--------SVCDAS 57
           TA++TG T G+G        +A  N  L       E +T   +V G           D +
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXT 86
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
             +E       V+  F G  +IL+NN G  +  K   ++  E    +++ N  S++H  +
Sbjct: 87  KPSEIADXXAXVADRFGGA-DILVNNAGVQFVEK-IEDFPVEQWDRIIAVNLSSSFHTIR 144
Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
            A P  K  G G II ++S  G++++   + Y A K  +  L K +A E A   + +NS+
Sbjct: 145 GAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSI 204
Query: 178 APWFITTPLTEPYLSD---------EKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAA 227
            P ++ TPL E  + D         E+ + EV  +  P ++    ++V+SL  +L    A
Sbjct: 205 CPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLALYLAGDDA 264
Query: 228 SYITGQTICVDGGFT 242
           + ITG  +  DGG+T
Sbjct: 265 AQITGTHVSXDGGWT 279

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 104/247 (42%), Gaps = 25/247 (10%)
Query: 15  LQGMTALVTGGTKGLGNE--------------------AELNECLREWKTKCFKVTGSVC 54
           L+   A++TGG  G+G                       E    +R    +   V    C
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVK---C 61
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S   + E   KQV S F G+ +IL+NN G  Y   P  E   E        N +S + 
Sbjct: 62  DVSQPGDVEAFGKQVISTF-GRCDILVNNAGI-YPLIPFDELTFEQWKKTFEINVDSGFL 119
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           +++   P +K +G G II ++S    L     T Y +TK A     + LA +  +D I +
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITV 179
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N++AP  + T  TE       F         + R   P +++   AFL    AS+ITGQT
Sbjct: 180 NAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQT 239
Query: 235 ICVDGGF 241
           + VDGG 
Sbjct: 240 LAVDGGM 246

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 12  RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAER--------- 62
           + +  G+ ALVTG  KG+G +    + L     K   VT +  D  S A+          
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTV--KALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCV 59
Query: 63  --------EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
                   EK +  +     G +++L+NN       +P +E   E      S N  S + 
Sbjct: 60  DLGDWDATEKALGGI-----GPVDLLVNNAAL-VIMQPFLEVTKEAFDRSFSVNLRSVFQ 113
Query: 115 LSQL-AHPLLKASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           +SQ+ A  ++     G+I+ VSS V  V   NL T Y++TKGAM  L K +A E     I
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLIT-YSSTKGAMTMLTKAMAMELGPHKI 172
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+NSV P  + T + +   +D +F  ++K R P+ +  E ++V + + FL    ++  +G
Sbjct: 173 RVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG 232
Query: 233 QTICVDGGF 241
             I VD G+
Sbjct: 233 GGILVDAGY 241

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 28/254 (11%)
Query: 14  SLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDA 56
           +L+G TALVTG T G+G                    +    L E      K      D 
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL 60
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           S  A+ E L       F G ++IL+NN G  +   P  ++  E    +++ N  + +H +
Sbjct: 61  SDVAQIEALFALAEREFGG-VDILVNNAGIQHVA-PVEQFPLESWDKIIALNLSAVFHGT 118
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +LA P ++A   G II ++SV G++ +     Y A K  +  L K +  E A  N+  N+
Sbjct: 119 RLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA 178
Query: 177 VAPWFITTPLTEPYLSDEKF-----LEEVKCRTPMERPG----EPKEVSSLVAFLCMPAA 227
           + P ++ TPL +  + D        L+        ++P      P+ +  LV FLC  A 
Sbjct: 179 ICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238
Query: 228 SYITGQTICVDGGF 241
           S + G    VDGG+
Sbjct: 239 SQVRGAAWNVDGGW 252

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 26/253 (10%)
Query: 14  SLQGMTALVTGGTKGLGN-------------------EAELNECLREWKTKCFKVTGSVC 54
           SL+    +VTG   G+G                    E  LN+ ++E +    +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S + + E+ +++    ++ ++++L NN G      P  E   E    +++ N  SA++
Sbjct: 64  DVSKKKDVEEFVRRTFETYS-RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            S+   P++   G G I+  +S+ G+     G  Y   K  +  L +++A  +    IR 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 175 NSVAPWFITTPL----TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            +V P  + T +    ++P  S+       K  +   R  EP+++++++ FL    AS++
Sbjct: 183 VAVLPGTVKTNIGLGSSKP--SELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFV 240
Query: 231 TGQTICVDGGFTV 243
            G  + VDGG TV
Sbjct: 241 NGDAVVVDGGLTV 253

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 28/252 (11%)
Query: 21  LVTGGTKGLGNE--------------AELNE-----CLREWKTKCFKVTGSVCDASSRAE 61
           +VTGG  G+G                A++NE        E  +K F V     D SS  +
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR---VDVSSAKD 87
Query: 62  REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP 121
            E  +++ ++ + G++++L+NN G   TT   V    E    + S N +  +  S+   P
Sbjct: 88  AESXVEKTTAKW-GRVDVLVNNAGFG-TTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIP 145
Query: 122 LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWF 181
           + + +G G+II  +S     +    T Y A+KGA++ L +  A + A++ IR+N+VAP  
Sbjct: 146 VXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGT 205
Query: 182 ITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
           I +P      ++     K   +   R   +R G  +E++    FL    + + TG  + V
Sbjct: 206 IDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGSILTV 265
Query: 238 DGGFTVNGFFFR 249
           DGG ++     +
Sbjct: 266 DGGSSIGNHLVK 277

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 22/245 (8%)
Query: 16  QGMTALVTGGTKGLGNEAELN--------------------ECLREWKTKCFKVTGSVCD 55
           Q   ALVTG ++G+G  A +                     E   E +    KV     +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
               A+ +++ +Q+   F G+L++ +NN  +    +P +E       + M+ N ++    
Sbjct: 63  VGQPAKIKEMFQQIDETF-GRLDVFVNNAASG-VLRPVMELEETHWDWTMNINAKALLFC 120
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +Q A  L++ +G G+I+ +SS+  +      T    +K A+  L + LA E +   I +N
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +V+   I T   + + + E  LE+ +  TP  R  E K++   V FL    A  I GQTI
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI 240
Query: 236 CVDGG 240
            VDGG
Sbjct: 241 IVDGG 245

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 21/245 (8%)
Query: 15  LQGMTALVTGGTKGLGNEAE-----------LNECLREWKTKCFKVTGSVC-----DASS 58
           L G T ++TGG +GLG EA            L + L E      +  G        D + 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
             + ++++      F G ++ L+NN G +       E + E    ++  N    +   + 
Sbjct: 63  EEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESV-ERFRKVVEINLTGVFIGMKT 120
Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
             P +K +G G+I+ +SS  G++   L + Y A+K  +  L+K  A E   D IR+NSV 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180
Query: 179 PWFITTPLTEPYLSDEKFLEEVKCRTPMERPG-EPKEVSSLVAFLCMPAASYITGQTICV 237
           P    TP+T    +  +  E     TPM R G EP E++  V  L    +SY+TG  + V
Sbjct: 181 PGMTYTPMTAE--TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAV 238
Query: 238 DGGFT 242
           DGG+T
Sbjct: 239 DGGWT 243

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 39/262 (14%)
Query: 15  LQGMTALVTGGTKGLG------------------------NEAELNECLREWKTKCFKVT 50
           L+G  A+VTG T G+G                         E E +    ++  K + + 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
             + DA  +A R+ + K   +L  G L+IL+NN G  +T  P  E+  +  + +++ N  
Sbjct: 62  ADLSDA--QATRDFIAKAAEAL--GGLDILVNNAGIQHTA-PIEEFPVDKWNAIIALNLS 116
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           + +H +  A P+++  G G II ++S  G++++   + Y A K  +  L K  A E A  
Sbjct: 117 AVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGK 176
Query: 171 NIRINSVAPWFITTPLTEPY---LSDEKFLE-EVKCRTPM--ERPG----EPKEVSSLVA 220
            I  N++ P ++ TPL E     +S +K ++ E   R  +  ++P      P+++     
Sbjct: 177 GITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAV 236
Query: 221 FLCMPAASYITGQTICVDGGFT 242
           FL   AA  +TG T+ +DGG+T
Sbjct: 237 FLSSAAADQMTGTTLSLDGGWT 258

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 19  TALVTGGTKGLG----------------NEAELNECLREW------KTKCFKVTGSVCDA 56
            A VTGG  GLG                + +E N+ +  W        + FK      D 
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAY--AVDV 84
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE-DLSFLMSTNFESAYHL 115
           +     E+  ++V + F GK+++LINN G   T   T   M + D   +M T+ ++ +++
Sbjct: 85  ADFESCERCAEKVLADF-GKVDVLINNAG--ITRDATFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++     +     G I+ + SV G         YA+ K  ++   K LA E A+  I +N
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201
Query: 176 SVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           +V+P ++ T + E    D    K L ++    P+ R G P EV++L+AFLC   A ++TG
Sbjct: 202 TVSPGYLATAMVEAVPQDVLEAKILPQI----PVGRLGRPDEVAALIAFLCSDDAGFVTG 257
Query: 233 QTICVDGGF 241
             + ++GG 
Sbjct: 258 ADLAINGGM 266

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 3   QAYDHDRQ-DRWSLQGMTALVTG--GTKGLGNEAE--------------------LNECL 39
           QA  H+   D+ SL+G   +VTG  G KG+G EA                       E +
Sbjct: 5   QATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV 64
Query: 40  REW-KTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA 98
           +E  KT   K     C   S    EKL+K V + F G+++  I N G        ++   
Sbjct: 65  KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGAT-ADSGILDGSV 122
Query: 99  EDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--NLGTIYAATKGAM 156
           E  + ++  +    +H ++      K  G G++++ +S+ G ++      T Y   K   
Sbjct: 123 EAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGC 182
Query: 157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS 216
             +A++LA EW RD  R+NS++P +I T L++    + + L       PM R G  KE+ 
Sbjct: 183 IHMARSLANEW-RDFARVNSISPGYIDTGLSDFVPKETQQLWH--SMIPMGRDGLAKELK 239
Query: 217 SLVAFLCMPAASYITGQTICVDGGFT 242
               +    A++Y TG  + +DGG+T
Sbjct: 240 GAYVYFASDASTYTTGADLLIDGGYT 265

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFK--------VTGSVCDASSRAEREKLMKQVS 70
           + LVTGG +G+G            K             + G  CD +     ++    V 
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVE 76
Query: 71  SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGN 130
               G + +L++N G +      +    E    +++ N   A+ ++Q A   ++ +  G 
Sbjct: 77  E-HQGPVEVLVSNAGLSADAF-LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGR 134
Query: 131 IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY 190
           +I + SV G         YAA+K  +  +A+++A E ++ N+  N VAP +I T +T   
Sbjct: 135 MIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL 194
Query: 191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
             DE+  +      P +R G P EV+ +V+FL    ASYI+G  I VDGG 
Sbjct: 195 --DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 38/250 (15%)
Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN 78
           + LVTG +KG+G         R+     F + G      +   +E L   V++  NG+L 
Sbjct: 28  SVLVTGASKGIGRA-----IARQLAADGFNI-GVHYHRDAAGAQETLNAIVANGGNGRL- 80
Query: 79  ILINNVGTNYTTKPTVEY----------------MAEDLSF----------LMSTNFESA 112
            L  +V      +  +E+                +A D +F          ++ TN +S 
Sbjct: 81  -LSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSF 139
Query: 113 YHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           Y++ Q    P++ A   G II +SSV GV+       Y+A K  +    K LA E A+  
Sbjct: 140 YNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRK 199
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N +AP  I T + E    +E  L+E     PM+R G+ +EV+ L ++L    A Y+T
Sbjct: 200 ITVNCIAPGLIDTGMIE---MEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVT 256
Query: 232 GQTICVDGGF 241
            Q I ++GG 
Sbjct: 257 RQVISINGGM 266

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 27/244 (11%)
Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN---- 74
            A+VTGG+ G+G    + + L  +  K   V  S+ + S     +     V++       
Sbjct: 16  VAIVTGGSSGIG--LAVVDALVRYGAKVVSV--SLDEKSDVNVSDHFKIDVTNEEEVKEA 71
Query: 75  --------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS 126
                   G+++IL+NN G    + P      E    ++  N   +Y +++   P++ A 
Sbjct: 72  VEKTTKKYGRIDILVNNAGIEQYS-PLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI 130
Query: 127 GAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL 186
           G G+II ++SV    +T     Y  +K A+  L +++A ++A   IR N+V P  I TP+
Sbjct: 131 GHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-PKIRCNAVCPGTIMTPM 189
Query: 187 T---------EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
                     E   + E+ +EE   + PM R G P+EV+ +VAFL    +S+ITG  + V
Sbjct: 190 VIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTV 249
Query: 238 DGGF 241
           DGG 
Sbjct: 250 DGGL 253

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 74  NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIIL 133
            G + +L++N G +      +    E    +++ N   A+ ++Q A   ++ +  G +I 
Sbjct: 99  QGPVEVLVSNAGLSADAF-LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIF 157
Query: 134 VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
           ++SV G+        YAA+K  +  +A+++A E ++ N+  N VAP +I T +T     D
Sbjct: 158 IASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--D 215
Query: 194 EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           E+  +      P +R G P EV+ +V+FL    ASYI+G  I VDGG 
Sbjct: 216 ERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 263

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 13  WSLQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGSVC--DA 56
           + L G  A+VTGG+KG+G                A+L+    +      +  G     D 
Sbjct: 8   FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV 67
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           + RA  +  M++      G  ++L  N G + T +P V+   E+  F    N    +  +
Sbjct: 68  TKRASVDAAMQKAIDALGG-FDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLAN 125
Query: 117 QLA-HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           Q+A    L ++  G I+  +S+   +   L   Y+A+K A+    + LA E A  NIR+N
Sbjct: 126 QIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVN 185
Query: 176 SVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
            V P F+ T + E           ++ E    E    TP+ R  EP++V+ +V FL   A
Sbjct: 186 CVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDA 245
Query: 227 ASYITGQTICVDGGFTVN 244
           A ++TGQ I V GG  ++
Sbjct: 246 ARFMTGQGINVTGGVRMD 263

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 30/251 (11%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT----GSV------CDASSRAEREK 64
           L+    +VTG + G+G    + E   +  +K   ++    G        CD ++    ++
Sbjct: 13  LRDKVVIVTGASMGIGRA--IAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNP---DQ 67
Query: 65  LMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL 122
           +   +  +F   G +++L+NN G     K     M E    ++  N    Y+ S+ A P 
Sbjct: 68  VKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGE-WRRIIDVNLFGYYYASKFAIPY 126
Query: 123 LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI 182
           +  S   +I+ +SSV   + T   + Y  +K A+  L K++A ++A   +R N+V P  I
Sbjct: 127 MIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PLLRCNAVCPATI 185
Query: 183 TTPL----------TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            TPL          ++P +  EK + E     PM+R G+P+EV+S VAFL    AS+ITG
Sbjct: 186 DTPLVRKAAELEVGSDP-MRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITG 244
Query: 233 QTICVDGGFTV 243
             + VDGG ++
Sbjct: 245 TCLYVDGGLSI 255

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 36/253 (14%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR--------------- 59
           L G  ALV+GG +G+G  + +   + E     F   G + D   +               
Sbjct: 5   LTGKVALVSGGARGMG-ASHVRAMVAEGAKVVF---GDILDEEGKAMAAELADAARYVHL 60
Query: 60  -----AEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAEDLSFLMSTNFESAY 113
                A+ +  +    + F G L++L+NN G  N  T    +Y   +   ++  N    +
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGG-LHVLVNNAGILNIGTIE--DYALTEWQRILDVNLTGVF 117
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
              +     +K +G G+II +SS+ G+  T     Y ATK A+  L K+ A E     IR
Sbjct: 118 LGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +NS+ P  + TP+T+ ++ ++ F      +T + R  EP EVS+LV +L    +SY TG 
Sbjct: 178 VNSIHPGLVKTPMTD-WVPEDIF------QTALGRAAEPVEVSNLVVYLASDESSYSTGA 230
Query: 234 TICVDGGFTVNGF 246
              VDGG TV G 
Sbjct: 231 EFVVDGG-TVAGL 242

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 30/253 (11%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT----GSV------CDASSRAEREK 64
           L+    +VTG + G+G    + E   +  +K   ++    G        CD ++    ++
Sbjct: 6   LRDKVVIVTGASMGIGRA--IAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNP---DQ 60
Query: 65  LMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL 122
           +   +  +F   G +++L+NN G     K     M E    ++  N    Y+ S+ A P 
Sbjct: 61  VKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGE-WRRIIDVNLFGYYYASKFAIPY 119
Query: 123 LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI 182
           +  S   +I+ +SSV   + T   + Y  +K A+  L K++A ++A   +R N+V P  I
Sbjct: 120 MIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PLLRCNAVCPATI 178
Query: 183 TTPL----------TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            TPL          ++P +  EK + E     PM+R G+P+EV+S VAFL    AS+ITG
Sbjct: 179 DTPLVRKAAELEVGSDP-MRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITG 237
Query: 233 QTICVDGGFTVNG 245
             + VDGG ++  
Sbjct: 238 TCLYVDGGLSIRA 250

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 74  NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIIL 133
            G + +L++N G +      +    E    +++ N   A+ ++Q A   ++ +  G +I 
Sbjct: 79  QGPVEVLVSNAGLSADAF-LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIF 137
Query: 134 VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
           + SV G+        YAA+K  +  +A+++A E ++ N+  N VAP +I T +T     D
Sbjct: 138 IGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--D 195
Query: 194 EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           E+  +      P +R G P EV+ +V+FL    ASYI+G  I VDGG 
Sbjct: 196 ERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 11  DRWSLQGMTALVTGGTKGLG-----NEAELNECLREW--------------KTKCFKVTG 51
           D +SL+G  A VTG + G+G       A+    +  W              KT       
Sbjct: 28  DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKA 87
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAED-LSFLMSTNFE 110
             C+ S     E+ + Q    F G +++ + N G  +T  P ++    D  + ++S +  
Sbjct: 88  YKCNISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLN 146
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--NLGTIYAATKGAMNQLAKNLACEWA 168
             Y+ S     + K +G G++I+ SS+ G +     L   Y   K A   LAK+LA EWA
Sbjct: 147 GVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA 206
Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
               R+N+++P +I T +T+   + +    +    TP+ R G  +E+     +L   A++
Sbjct: 207 P-FARVNTISPGYIDTDITD--FASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNAST 263
Query: 229 YITGQTICVDGGFT 242
           + TG  + +DGG+T
Sbjct: 264 FTTGSDVVIDGGYT 277

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 28/251 (11%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE-------KLMK 67
           L G  A++TGGT G+G    +     E   K   +TG   D   +A +        +  +
Sbjct: 4   LDGKVAIITGGTLGIG--LAIATKFVEEGAKVM-ITGRHSDVGEKAAKSVGTPDQIQFFQ 60
Query: 68  QVSS-------LFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
             SS       LF+      G ++ L+NN G     K   E    +   L++ N +  + 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFF 119
Query: 115 LSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN--LACEWARDN 171
            ++L    +K  G G +II +SS+ G +       Y A+KGA+  ++K+  L C     +
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +R+N+V P +I TPL +     E+ + + + +TPM   GEP +++ +  +L    + + T
Sbjct: 180 VRVNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEPNDIAYICVYLASNESKFAT 238
Query: 232 GQTICVDGGFT 242
           G    VDGG+T
Sbjct: 239 GSEFVVDGGYT 249

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 27/240 (11%)
Query: 16  QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV------------CDASSRAERE 63
           Q    ++TG ++G+G  A L    R+   +    + S+             D S     +
Sbjct: 27  QQKVVVITGASQGIG--AGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETAD 84
Query: 64  KLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLL 123
           +++++    F G+++ L+NN G  +  KP VE   ED    +  N    +H++Q A    
Sbjct: 85  RIVREGIERF-GRIDSLVNNAGV-FLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEX 142
Query: 124 KASGAGNIILVSSVCGVLSTNLG---TIYAATKGAMNQLAKNLACEWARDNIRINSVAPW 180
              G+G+I+ +++   V    +G    + + TKG +N + ++LA E++R  +R+N+V+P 
Sbjct: 143 LKQGSGHIVSITTSL-VDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAVSPG 201
Query: 181 FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
            I TP   P  +            P+ R GE ++V  + A L +  A +ITG+ + VDGG
Sbjct: 202 VIKTP-XHPAETHSTL----AGLHPVGRXGEIRDV--VDAVLYLEHAGFITGEILHVDGG 254

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 31/253 (12%)
Query: 10  QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL---- 65
           ++ +SL+G  ALVTG   GLG    +       +  C         A+ RA  E L    
Sbjct: 2   KNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVC---------AARRAPDETLDIIA 52
Query: 66  ----------------MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
                           +    S  +   +IL+NN G       +VE+   D   +M  N 
Sbjct: 53  KDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGI-IRRADSVEFSELDWDEVMDVNL 111
Query: 110 ESAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           ++ +  +Q  A  LL    +G ++ ++S+           Y A K  +  L K LA EWA
Sbjct: 112 KALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA 171
Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              I +N++AP +I T  TE   +D    + +  R P  R G  ++++    FL   AA 
Sbjct: 172 AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAAD 231
Query: 229 YITGQTICVDGGF 241
           Y+ G  + VDGG+
Sbjct: 232 YVHGAILNVDGGW 244

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESAYHLSQLAHPLLKASGAGNIIL 133
           G+L+I+ NN   +      V  M  D+     + N      + + A P L ++G G I+ 
Sbjct: 84  GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVN 143
Query: 134 VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
           +SS     + ++ T YA TK A+  L + +A ++ R  +R N++AP  + TP  E  L  
Sbjct: 144 ISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP- 202
Query: 194 EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           +  ++         R GEP E++ LV FL    A++ITGQ I  D G 
Sbjct: 203 QPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL 250

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 14  SLQGMTALVTGGTKGLG---------NEAELNECLREWKTKCFKVTGSVCDAS------- 57
           SL+G  AL+TG   G G           A++    R+ K    +V G + DA+       
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD-KAGAERVAGEIGDAALAVAADI 64
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
           S+        + +    GK++IL+NN G  +  +       E+   ++  N    Y ++ 
Sbjct: 65  SKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTS 124
Query: 118 LAHPLLKASGAGN---IIL--VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
              P  K +GA     +IL   S+  G    NL   Y ATKG +  + K LA E A   I
Sbjct: 125 KLIPHFKENGAKGQECVILNVASTGAGRPRPNL-AWYNATKGWVVSVTKALAIELAPAKI 183
Query: 173 RINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           R+ ++ P    TPL   ++ +  E+  ++ +   PM R  +P +++   AFLC P AS I
Sbjct: 184 RVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMI 243
Query: 231 TGQTICVDGGFTVNG 245
           TG  + VDGG ++ G
Sbjct: 244 TGVALDVDGGRSIGG 258

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 24/249 (9%)
Query: 15  LQGMTALVTGGTKGLG-----------NEAELNECLREWKTKCFKVTGS-------VCDA 56
           L G  A++TGGT G+G            +  + +   +   K  K  G+         D+
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           S      KL       F G ++ L+NN G     K   E    +   L++ N +  +  +
Sbjct: 64  SDEDGWTKLFDATEKAF-GPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 117 QLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN--LACEWARDNIR 173
           +L    +K  G G +II +SS+ G +       Y A+KGA+  ++K+  L C     ++R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+V P +I TPL +     E+ + + + +TPM   GEP +++ +  +L    + + TG 
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEPNDIAYICVYLASNESKFATGS 240
Query: 234 TICVDGGFT 242
              VDGG+T
Sbjct: 241 EFVVDGGYT 249

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 42/255 (16%)
Query: 19  TALVTGGTKGLG----------------------NEAELNECL-REW--KTKCFKVTGSV 53
           T +VTGG +G+G                      +  E+ E + +E+  KTK ++     
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ----- 70
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD S+     K ++Q+ +   G ++ LI N G +   KP  E   ED +F+   N    +
Sbjct: 71  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVF 128
Query: 114 HLSQLAHPL-LKASGAGNIILVSSVCGVL---STNLGTI----YAATKGAMNQLAKNLAC 165
           +  +    L L+    G+I++ SS+   +   S+  G++    Y ++K A + L K LA 
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188
Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           EWA   IR+N+++P ++ T  T     D+K  +      P+ R  +P+E++     L   
Sbjct: 189 EWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSD 246
Query: 226 AASYITGQTICVDGG 240
            A+Y+TG    +DGG
Sbjct: 247 HATYMTGGEYFIDGG 261

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 30  GNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYT 89
           G+  EL E +R  + +  ++     D    A  + ++ +  + F G ++IL++NVG +  
Sbjct: 90  GSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQ 148
Query: 90  TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTI 148
            +  V    +  S ++ TN   A+H  +   P +++    G++I VSS  G+      + 
Sbjct: 149 GE-VVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSH 207
Query: 149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT---------EPYLSD---EKF 196
           YAA+K  +  L  +LA E  R NIR+NSV P  + T +           P+L +   E  
Sbjct: 208 YAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDA 267
Query: 197 LEEVKCRTPMERP-GEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
            E     T +  P  EP++VS+ VA+L    A YI G  I VDGG
Sbjct: 268 AELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 35/241 (14%)
Query: 20  ALVTGGTKGLGNE---------AELNECLREWKTKCFKVTGS---VCDASSRAEREKLMK 67
            LV   ++G+G           AE+  C R    +  K +G    VCD   R + + L +
Sbjct: 22  VLVLAASRGIGRAVADVLSQEGAEVTICAR--NEELLKRSGHRYVVCDL--RKDLDLLFE 77
Query: 68  QVSSLFNGKLNILINNVGTNYTTKPTV----EYMAEDLSFLMSTNFESAYHLSQLAHPLL 123
           +V      +++IL+ N G      P      E   ED    + + F +   + +   P +
Sbjct: 78  KVK-----EVDILVLNAGG-----PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAM 127
Query: 124 KASGAGNIILVSSVCGVLS--TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWF 181
           K  G G I+ ++S   V+S   NL T  +A + A+    K L+ E A   I +N VAP +
Sbjct: 128 KEKGWGRIVAITSFS-VISPIENLYTSNSA-RMALTGFLKTLSFEVAPYGITVNCVAPGW 185
Query: 182 ITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
             T   +  LS+EK  ++V+ + PM R  +P+E++S+VAFLC   ASY+TGQTI VDGG 
Sbjct: 186 TETERVKELLSEEK-KKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 244
Query: 242 T 242
           +
Sbjct: 245 S 245

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 111/260 (42%), Gaps = 29/260 (11%)
Query: 4   AYDHDRQDRWSLQGMTALVTGGTKGLG------------NEAELNECLREWKT------- 44
           A   +R+  + L   + LVTGGTKG+G            N A      RE  +       
Sbjct: 28  AEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE 87
Query: 45  -KCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-EDLS 102
                V G   D S         + V   F G L+++  N G     +  ++ M  E LS
Sbjct: 88  LGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEAR--LDTMTPEQLS 144
Query: 103 FLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAK 161
            ++  N +   +  Q     L ASG G +IL SS+ G ++   G + Y A+K A     +
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMR 204
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVA 220
             A E A   + +N++ P  I   LTE  +   E+++  +    PM   G P ++  L A
Sbjct: 205 TAAIELAPRGVTVNAILPGNI---LTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAA 261
Query: 221 FLCMPAASYITGQTICVDGG 240
           FL    A YITGQ I VDGG
Sbjct: 262 FLATDEAGYITGQAIVVDGG 281

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 30/247 (12%)
Query: 15  LQGMTALVTGGTKGLGN-------------------EAELNECLREWKTKCFKVTGSVCD 55
           L G   LVTG  KG+G                    +A+L+  +RE    C  +     D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCVD 60
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
                  E+ +  V     G +++L+NN       +P +E   E        N  +   +
Sbjct: 61  LGDWEATERALGSV-----GPVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 116 SQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           SQ+    L A G  G I+ VSS C   +    ++Y +TKGA++ L K +A E     IR+
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  + T + +   SD    + +  R P+ +  E + V + + FL    +   TG T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 235 ICVDGGF 241
           + V+GGF
Sbjct: 235 LPVEGGF 241

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 31  NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN--GKLNILINNVGTNY 88
           N   L +     + K  +    VCD +S    E ++  V S+    GK++ L NN G   
Sbjct: 40  NREALEKAEASVREKGVEARSYVCDVTSE---EAVIGTVDSVVRDFGKIDFLFNNAGYQG 96
Query: 89  TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI 148
              P  +Y ++D + +++ N   A+H+ +     +     G I+  +S+ GV        
Sbjct: 97  AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAA 156
Query: 149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL-------------TEPYLSDEK 195
           Y  +KGA+  L +  A + A  NIR+N+++P ++                 ++ + +D K
Sbjct: 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPK 216
Query: 196 FL-EEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
            + +++    PM R G+  E+  +VAFL    +S++TG  + + GG
Sbjct: 217 VVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR--------------- 59
           L G  ALV+GG +G G  + +   + E     F   G + D   +               
Sbjct: 5   LTGKVALVSGGARGXG-ASHVRAXVAEGAKVVF---GDILDEEGKAXAAELADAARYVHL 60
Query: 60  -----AEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAEDLSFLMSTNFESAY 113
                A+ +  +    + F G L++L+NN G  N  T    +Y   +   ++  N    +
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGG-LHVLVNNAGILNIGTIE--DYALTEWQRILDVNLTGVF 117
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
              +      K +G G+II +SS+ G+  T     Y ATK A+  L K+ A E     IR
Sbjct: 118 LGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +NS+ P  + TP T+ ++ ++ F      +T + R  EP EVS+LV +L    +SY TG 
Sbjct: 178 VNSIHPGLVKTPXTD-WVPEDIF------QTALGRAAEPVEVSNLVVYLASDESSYSTGA 230
Query: 234 TICVDGGFTVNGF 246
              VDGG TV G 
Sbjct: 231 EFVVDGG-TVAGL 242

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEV-KCRTPME 207
           YA +K A+    +  A  W    +R+N++AP    TPL +  L D ++ E + K   PM 
Sbjct: 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG 214
Query: 208 RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           R  EP E++S++AFL  PAASY+ G  I +DGG 
Sbjct: 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 15  LQGMTALVTGGTKGLGNE---------AELNEC------LREWKTKCFKVTGSVCDASSR 59
           L+    L+TG   G+G           A L  C      LRE   +       V D +  
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE-AAEAVGAHPVVXDVADP 61
Query: 60  AEREKLMKQVSSLFNGKLNILINNVGT---NYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           A  E+   +  +   G+L+ +++  G    N+  K  +E    D   ++  N   ++ ++
Sbjct: 62  ASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKXPLE----DWELVLRVNLTGSFLVA 116
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIRIN 175
           + A    +    G+I+L +S   V   NLG   YAA+   +  L + LA E  R  IR+N
Sbjct: 117 KAASEAXREKNPGSIVLTASR--VYLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVN 174
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           ++AP FI T  T      EK  E+    TP+ R G+P EV+    FL    +S+ITGQ +
Sbjct: 175 TLAPGFIETRXTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVL 232
Query: 236 CVDGGFTVN 244
            VDGG T+ 
Sbjct: 233 FVDGGRTIG 241

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+++IL+NN G  +T     ++  E    +++ N  + +H +  A P +K  G G II +
Sbjct: 82  GRIDILVNNAGIQHTALIE-DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINI 140
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-- 192
           +S  G++++   + Y A K  +    K  A E A   I  N++ P ++ TPL E  +S  
Sbjct: 141 ASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISAL 200
Query: 193 --------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
                   +    E +  + P  +   P+++     FL   AA+ ITG T+ VDGG+T
Sbjct: 201 AEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 27/243 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------EAELNECLREWKTKCFKVTGSVC--DASS 58
           L G  A+VTG  +G+G                 +++    + K    KV G+    D ++
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTA 270
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESAYHLSQ 117
               +K+   V+    GK++IL+NN G   T    +  M E     +++ N  +   L++
Sbjct: 271 DDAVDKITAHVTEHHGGKVDILVNNAG--ITRDKLLANMDEKRWDAVIAVNLLAPQRLTE 328
Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
                      G +I +SS+ G+      T YA TK  M  LA+ LA   A   I IN+V
Sbjct: 329 GLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAV 388
Query: 178 APWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           AP FI T +TE  P  +      EV  R   + + G+P +V+ L+A+   PA++ +TG T
Sbjct: 389 APGFIETKMTEAIPLAT-----REVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNT 443
Query: 235 ICV 237
           I V
Sbjct: 444 IRV 446

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 36/255 (14%)
Query: 20  ALVTGGTKGLGNEAEL---------------NECLREWKTKCF-------KVTGSVCDAS 57
           A++TG + G+G    +                E L E + +          V   V D +
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGT---NYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           + A +++++      F GKL+IL+NN G    +  +K       E     ++ N  S   
Sbjct: 69  TDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127
Query: 115 LSQLAHPLLKASGAGNIILVSSVC-GVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           L++ A P L +S  G I+ +SS+  G+ +T     Y+  K A++Q  +N A +  +  IR
Sbjct: 128 LTKKAVPHL-SSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 186
Query: 174 INSVAPWFITT----PLTEPYLSDEKF---LEEVKCRTPMERPGEPKEVSSLVAFLC-MP 225
           +NS++P  + T     +  P  + +KF   +  +K   P    G+P++++ ++AFL    
Sbjct: 187 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 246
Query: 226 AASYITGQTICVDGG 240
            +SYI G  + VDGG
Sbjct: 247 TSSYIIGHQLVVDGG 261

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 15  LQGMTALVTGGTKGLGN---EAELNECLR---------EWKTKCFKVTGSVC----DASS 58
           L G TAL+TG  +G+G    EA + E  R           +    ++  + C    D + 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ- 117
           +A  ++ + ++   + G ++IL+NN    +   P VE   E    L + N      + Q 
Sbjct: 63  QASIDRCVAELLDRW-GSIDILVNNAAL-FDLAPIVEITRESYDRLFAINVSGTLFMMQA 120
Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
           +A  ++     G II ++S  G     L  +Y ATK A+  L ++      R  I +N++
Sbjct: 121 VARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 180
Query: 178 APWFITTPLTEPYLSDEKFLE-----------EVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           AP  +     +    D KF +           +V    P  R G  ++++ +  FL  P 
Sbjct: 181 APGVVDGEHWDGV--DAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238
Query: 227 ASYITGQTICVDGG 240
           A YI  QT  VDGG
Sbjct: 239 ADYIVAQTYNVDGG 252

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 14  SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVCD 55
           + +G  ALVTG ++G+G    + E L     K                       G + +
Sbjct: 2   NFEGKIALVTGASRGIGR--AIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLN 59
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A  E +++++ + F G+++IL+NN G        +    E+ + ++ TN  S + L
Sbjct: 60  VTDPASIESVLEKIRAEF-GEVDILVNNAGITRDN-LLMRMKDEEWNDIIETNLSSVFRL 117
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           S+     +     G II +              YAA K  +   +K+LA E A   I +N
Sbjct: 118 SKAVMRAMMKKRHGRIITIGGQAN---------YAAAKAGLIGFSKSLAREVASRGITVN 168
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
            VAP FI T       SD++    +  + P  R G  +E+++ VAFL    A+YITG+T+
Sbjct: 169 VVAPGFIET-------SDDQ-RAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 220
Query: 236 CVDGGF 241
            V+GG 
Sbjct: 221 HVNGGM 226

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+++IL+NN G  +T     ++  E    +++ N  + +H +  A P +K  G G II +
Sbjct: 82  GRIDILVNNAGIQHTALIE-DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINI 140
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-- 192
           +S  G++++   + Y A K  +    K  A E A   I  N++ P ++ +PL E  +S  
Sbjct: 141 ASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQISAL 200
Query: 193 --------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
                   +    E +  + P  +   P+++     FL   AA+ ITG T+ VDGG+T
Sbjct: 201 AEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+++IL+NN G  +T     ++  E    +++ N  + +H +  A P +K  G G II +
Sbjct: 82  GRIDILVNNAGIQHTALIE-DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINI 140
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-- 192
           +S  G++++   + Y A K  +    K  A E A   I  N++ P ++  PL E  +S  
Sbjct: 141 ASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQISAL 200
Query: 193 --------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
                   +    E +  + P  +   P+++     FL   AA+ ITG T+ VDGG+T
Sbjct: 201 AEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 15  LQGMTALVTGGTKGLGN-------------------EAELNECLREWKTKCFKVTGSVCD 55
           L G   LVTG  KG+G                    +A+L+  +RE    C  +     D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCVD 60
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
                  E+ +  V     G +++L+NN       +P +E   E        N  +   +
Sbjct: 61  LGDWEATERALGSV-----GPVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 116 SQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           SQ+    L A G  G I+ VSS     +    ++Y +TKGA++ L K +A E     IR+
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  + T + +   SD    + +  R P+ +  E + V + + FL    +   TG T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 235 ICVDGGF 241
           + V+GGF
Sbjct: 235 LPVEGGF 241

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 20  ALVTGGTKGLGNEAELN-------------------ECLRE-WKTKCFKVTGSVCDASSR 59
           AL+T GTKGLG +                       E ++E +K    ++     D + +
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
            +  K++++  S F GK++ LINN G   +  K  V+Y  ++ + ++  N  + +HL +L
Sbjct: 70  EDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 119 AHPLLKASGAGNII-----LVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
             P+++    G II        S  G +     + +AA K  +  L K +A E A   I 
Sbjct: 129 VVPVMRKQNFGRIINYGFQGADSAPGWIYR---SAFAAAKVGLVSLTKTVAYEEAEYGIT 185
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
            N V P  I   + E  + + + L+E    TP+ R G  ++++  ++FLC   +  ITG 
Sbjct: 186 ANMVCPGDIIGEMKEATIQEARQLKE--HNTPIGRSGTGEDIARTISFLCEDDSDMITGT 243
Query: 234 TICVDGGFTV 243
            I V G   V
Sbjct: 244 IIEVTGAVDV 253

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 10  QDRWS----LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL 65
            DR++    L G  AL+TG TKG+G +          +        S  DA+ RA  E+ 
Sbjct: 9   DDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF 68
Query: 66  MKQVSSL-------------------FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS 106
              V ++                     G L++L+NN G ++  +P V+   +     ++
Sbjct: 69  GTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP-QPVVDTDPQLFDATIA 127
Query: 107 TNFESAYHL-SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLAC 165
            N  +   L S +   ++ A   G II V+S   +        Y  +K  +    K LA 
Sbjct: 128 VNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLAR 187
Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           E     IR NSV P  + T + +    DE     +  R P+ R   P EVS  V +L   
Sbjct: 188 ELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASD 247
Query: 226 AASYITGQTICVDGGFTVN 244
           AAS I G  I VDGG+T+ 
Sbjct: 248 AASMINGVDIPVDGGYTMG 266

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 75  GKLNILINNVGTNYTTKPTV--EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNII 132
           G++++L+NN G    T+  V  +   ED   ++ TN  S +++++     +   G G II
Sbjct: 90  GEIDVLVNNAGI---TRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRII 146
Query: 133 LVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS 192
            +SSV G       T Y+  K  ++    +LA E A   + +N+V+P +I T + +    
Sbjct: 147 NISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP 206
Query: 193 DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           D   LE++    P+ R G P E+ S+VA+L    + + TG    ++GG 
Sbjct: 207 D--VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL 253

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 41/254 (16%)
Query: 15  LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM-------- 66
           L G T LVTG   G+G  A             F   G+   A  R ER            
Sbjct: 4   LSGKTILVTGAASGIGRAA----------LDLFAREGASLVAVDREERLLAEAVAALEAE 53
Query: 67  -----------KQVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
                      K V ++F       G+L+ + +  G  ++   +     E    ++  N 
Sbjct: 54  AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL-SWNLPLEAWEKVLRVNL 112
Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
             ++ +++ A  +L+  G  +++L  SV G+ +  L   YAA K  +  LA+ LA E AR
Sbjct: 113 TGSFLVARKAGEVLEEGG--SLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELAR 169
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             +R+N + P  I TP+T   L    + +EV   +P+ R G P+EV+    FL    ++Y
Sbjct: 170 KGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGA-SPLGRAGRPEEVAQAALFLLSEESAY 227
Query: 230 ITGQTICVDGGFTV 243
           ITGQ + VDGG ++
Sbjct: 228 ITGQALYVDGGRSI 241

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 28/252 (11%)
Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ--VS 70
           + L+G TALVTG ++G+G  A + E L         +   V   S+ A +++++     +
Sbjct: 29  FGLRGRTALVTGSSRGIG--AAIAEGLA--GAGAHVILHGVKPGSTAAVQQRIIASGGTA 84
Query: 71  SLFNGKL-------------------NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
               G L                   +IL+ N         +      DL+F ++ N  S
Sbjct: 85  QELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSA-LTPNDLAFQLAVNLGS 143
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              + Q A P + A   G ++ + S+  +   ++ T YAATK A + L ++ A ++A DN
Sbjct: 144 TVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDN 203
Query: 172 IRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           + +N++AP  + T       +   E + E V+    M R G P+E+     FL   A S+
Sbjct: 204 VLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSF 263
Query: 230 ITGQTICVDGGF 241
           +TG+TI + GG+
Sbjct: 264 MTGETIFLTGGY 275

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 109/249 (43%), Gaps = 36/249 (14%)
Query: 21  LVTGGTKGLG----------------NEAELNEC-------LREWKTKCFKVTGSVCDAS 57
           LVTGG++G+G                N A   E        + E   +   + G V +A 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNA- 88
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTK---PTVEYMAEDLSFLMSTNFESAY 113
             A+       V   F G+L+ L+NN G  +Y  +    +VE +   L   ++ +   A 
Sbjct: 89  --ADIAAXFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAA 145
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNI 172
              +    L    G G I+ VSS   +L +    + YAA+K A++     LA E A + I
Sbjct: 146 EAVRRXSRLYSGQG-GAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGI 204
Query: 173 RINSVAPWFITTPL-TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           R+N+V P  I T L     L D     E     P +R G P+EV+  + +L  P+ASY+T
Sbjct: 205 RVNAVRPGIIETDLHASGGLPDRA--REXAPSVPXQRAGXPEEVADAILYLLSPSASYVT 262
Query: 232 GQTICVDGG 240
           G  + V GG
Sbjct: 263 GSILNVSGG 271

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 48/270 (17%)
Query: 12  RWSLQGMTALVTGGTKGLGNEAEL---------------NECLREWKTKCFK-------V 49
           R+S  G + ++TG + G+G  A +                + L E K +  K       +
Sbjct: 23  RFS--GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80
Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY------TTKPTVEYMAEDLSF 103
              V D +  + ++ ++    + F GK++IL+NN G N       T +P   Y     +F
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQK---TF 136
Query: 104 LMSTNFESAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAK 161
            +  NF++   ++Q     L+K  G   I+ VSS+      + G   YA  K A++Q  +
Sbjct: 137 KL--NFQAVIEMTQKTKEHLIKTKG--EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192
Query: 162 NLACEWARDNIRINSVAPWFITT----PLTEPYLSDEKFLEEVKCR---TPMERPGEPKE 214
             A +  +  +R+NSV+P  + T     +  P  + +K    +  R    P+   G+P+E
Sbjct: 193 CTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE 252
Query: 215 VSSLVAFLC-MPAASYITGQTICVDGGFTV 243
           +++++ FL     +SYI GQ+I  DGG T+
Sbjct: 253 IANIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 38/254 (14%)
Query: 12  RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVC----DASSRAEREKLMK 67
           R++ +G   ++TG TK         E L E K +  +  G +     D  +  + +K ++
Sbjct: 25  RFAKEGARVVITGRTK---------EKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIE 75
Query: 68  QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-----LMSTNFESAYHLSQ-LAHP 121
           Q+   F G+++ILINN   N+         AEDLS      +++      ++ SQ +   
Sbjct: 76  QIDEKF-GRIDILINNAAGNFICP------AEDLSVNGWNSVINIVLNGTFYCSQAIGKY 128
Query: 122 LLKASGAGNIILVSSVCGVLSTNLGTIY-AATKGAMNQLAKNLACEWARD-NIRINSVAP 179
            ++    GNII   +         G I+ AA K  +    K LA EW R   IR+N++AP
Sbjct: 129 WIEKGIKGNIINXVATY-AWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAP 187
Query: 180 WFITTPLTEPYLSDEKFL-EEVKCRT----PMERPGEPKEVSSLVAFLCMPAASYITGQT 234
                P+     +D+ ++ EE   RT    P+ R G P+E++ L  +LC   A+YI G  
Sbjct: 188 ----GPIERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTC 243
Query: 235 ICVDGGFTVNGFFF 248
              DGG  ++ + F
Sbjct: 244 XTXDGGQHLHQYPF 257

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43  KTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS 102
           +     V GS CD +S  E    +      F G + IL+N+ G N   + T +      +
Sbjct: 69  RAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGE-TADLDDALWA 126
Query: 103 FLMSTNFESAYHLSQ--LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
            ++ TN    + +++  L    ++ +G G I+ ++S  G         Y A+K  +    
Sbjct: 127 DVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFT 186
Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGE 211
           K++  E A+  I +N+V P ++ TP+ E           +++++  E    + P+ R   
Sbjct: 187 KSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYST 246
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           P+EV+ LV +L   AA+ IT Q + V GG 
Sbjct: 247 PEEVAGLVGYLVTDAAASITAQALNVCGGL 276

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 15  LQGMTALVTGGTKGLGNEAE---LNECLREWKTKCFK-------------VTGSVCDASS 58
           L    A++TG T G+G  A    + E  R + T   K               G   D+++
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSAN 86
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
            AE ++L ++V +   G++++L  N G   +  P  E   E        N +      Q 
Sbjct: 87  LAELDRLYEKVKAE-AGRIDVLFVNAGGG-SXLPLGEVTEEQYDDTFDRNVKGVLFTVQK 144
Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
           A PLL A G+ +++L  S  G   T   ++YAA+K A+   A+N   +     IRIN+++
Sbjct: 145 ALPLL-ARGS-SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLS 202
Query: 179 PWFI-TTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           P    TT L E    D    +  L  +  + P  R G  +EV++   FL    +S++TG 
Sbjct: 203 PGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVTGA 262
Query: 234 TICVDGG 240
            + VDGG
Sbjct: 263 ELFVDGG 269

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+L+I++NN G     + T E    D S  +  N E+ + + + A PL  A+G G I+ V
Sbjct: 93  GRLDIVVNNAGVISRGRIT-ETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNV 151
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE 194
           +S  G+       +Y  TK A+  L +    + A   IRIN+V P  + TP      +  
Sbjct: 152 ASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKR 211
Query: 195 KF-----LEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            F     + E+    P+ R  EP++++ +V FL   AA Y+ G  + V+GG  V
Sbjct: 212 GFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV-EYMAEDLSFLMSTNFESA 112
           CD +   +   L+    +  +GKL+I+  NVG   TT  ++ E   ED   +M  N   A
Sbjct: 71  CDVTKDEDVRNLVDTTIAK-HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDN 171
           + +++ A  ++  +  G+I+  +S+    +   +  +Y ATK A+  L  +L  E     
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189
Query: 172 IRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPG--EPKEVSSLVAFLCMPAAS 228
           IR+N V+P+ + +P LT+ +  D   +EE+  +    +      ++V+  VA+L    + 
Sbjct: 190 IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK 249
Query: 229 YITGQTICVDGGFT 242
           Y++G  + +DGG+T
Sbjct: 250 YVSGLNLVIDGGYT 263

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D ++  E  + +  V++ ++G+L+ +++  G +    P  +  +E     +  N     +
Sbjct: 71  DITNEDETARAVDAVTA-WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           + + A   +   G G+ + +SS+    +      Y  TK A++ L +  A E     +R+
Sbjct: 130 VLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRV 189
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           NS+ P  I T L        +   +    TP+ R GE ++V+++  FL   AAS++TGQ 
Sbjct: 190 NSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQV 249
Query: 235 ICVDGG 240
           I VDGG
Sbjct: 250 INVDGG 255

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 26/247 (10%)
Query: 15  LQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCF--KVTGSVCDASS 58
           L G TALVTG  +G+G                +++N    +        K      D S 
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---LMSTNFESAYHL 115
               + L  ++ +L  G ++IL+NN     +  P V +   DL     ++  N    + +
Sbjct: 64  PGSVKALFAEIQAL-TGGIDILVNNA----SIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118
Query: 116 SQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           ++     ++A+G AG +I ++S      T     Y A KG +    + LA E  + NI  
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  I +   +    +E F   V+    M+  G+P+ ++ +V+FL    A +ITGQT
Sbjct: 179 NAVTPGLIESDGVKASPHNEAF-GFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQT 237
Query: 235 ICVDGGF 241
           + VD G 
Sbjct: 238 LNVDAGM 244

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 16  QGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDA 56
           QG  A+V GGT G G                   NE+ +     E+  +   +   + D 
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 66
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           +  A    ++   +    G +++L  N G +   +P  +          + N + A+   
Sbjct: 67  NEIA----VLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTV 121
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           Q   PL++    G+I+  SSV         ++Y+A+K A+   A  LA E     IR+NS
Sbjct: 122 QRLTPLIRE--GGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNS 179
Query: 177 VAPWFITTP------LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           V+P FI TP      +TE   ++ K L +    TP +R G   EV+  V FL    A++ 
Sbjct: 180 VSPGFIDTPTKGVAGITEAERAEFKTLGD--NITPXKRNGTADEVARAVLFLAFE-ATFT 236
Query: 231 TGQTICVDGGF 241
           TG  + VDGG 
Sbjct: 237 TGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 16  QGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDA 56
           QG  A+V GGT G G                   NE+ +     E+  +   +   + D 
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 65
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           +  A    ++   +    G +++L  N G +   +P  +          + N + A+   
Sbjct: 66  NEIA----VLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTV 120
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           Q   PL++    G+I+  SSV         ++Y+A+K A+   A  LA E     IR+NS
Sbjct: 121 QRLTPLIRE--GGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNS 178
Query: 177 VAPWFITTP------LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           V+P FI TP      +TE   ++ K L +    TP +R G   EV+  V FL    A++ 
Sbjct: 179 VSPGFIDTPTKGVAGITEAERAEFKTLGD--NITPXKRNGTADEVARAVLFLAFE-ATFT 235
Query: 231 TGQTICVDGGF 241
           TG  + VDGG 
Sbjct: 236 TGAKLAVDGGL 246

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVK-CRTPME 207
           YA +K A+  LA+    +WA   +R+N VAP  + TPL +   +D ++ E  +    P+ 
Sbjct: 153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLG 212
Query: 208 RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           R  EP+EV+  +AFL  P AS+I G  + VDGG 
Sbjct: 213 RGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
Query: 62  REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS--TNFESAYHLSQLA 119
           R+ + + +++   G+L+ L+NN G N      +   A   +F+ S   N    Y ++   
Sbjct: 71  RDAVAQTIATF--GRLDGLVNNAGVN----DGIGLDAGRDAFVASLERNLIHYYAMAHYC 124
Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            P LKA+  G I+ +SS   V      + Y A+KGA   L +  A       +R+N+V P
Sbjct: 125 VPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIP 183
Query: 180 WFITTPLTEPYLS----DEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQT 234
             + TPL   +++     E  L E+  + P+  R   P E++    FL  P AS+ TG+ 
Sbjct: 184 AEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEW 243
Query: 235 ICVDGGFT 242
           + VDGG+T
Sbjct: 244 LFVDGGYT 251

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 106/248 (42%), Gaps = 30/248 (12%)
Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQG  ALVTGG  G+G                   NEA   +   E   +   V     D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR---HD 60
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            SS A+   +M  V     G LN+L+NN G           + ED S L+  N ES +  
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRL-EDFSRLLKINTESVFIG 118
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL--AKNLACEWARDNIR 173
            Q     +K +G G+II ++SV   L       Y+A+K A++ L  A  L+C      IR
Sbjct: 119 CQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE---PKEVSSLVAFLCMPAASYI 230
           +NS+ P  I TP+ +  L      E V     + R G    P+ ++ LV FL    +S +
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237
Query: 231 TGQTICVD 238
           +G  +  D
Sbjct: 238 SGSELHAD 245

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 14  SLQGMTALVTGGTKGLGNEAELNECLREWKT---------------KCFKVTGSVCDASS 58
           SL+G  ALVTG  +G+G E  +    R  K                   K  GS  DA+ 
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS--DAAC 83
Query: 59  RAEREKLMKQVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
                 +++ +  +F       GKL+I+ +N G   +     +   E+   + + N    
Sbjct: 84  VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQ 142
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCG-VLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           + +++ A+  L+    G +IL+ S+ G   +     +Y+ +KGA+   A+ +A + A   
Sbjct: 143 FFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 200
Query: 172 IRINSVAPWFITTPLTEPY----------LSDEKFLEEVKCR-TPMERPGEPKEVSSLVA 220
           I +N VAP  I T +              LS+E+  E    + +P+ R G P +++ +V 
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 260
Query: 221 FLCMPAASYITGQTICVDGG 240
           FL      ++TG+ I +DGG
Sbjct: 261 FLASNDGGWVTGKVIGIDGG 280

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 14  SLQGMTALVTGGTKGLGNEAELNECLREWKT---------------KCFKVTGSVCDASS 58
           SL+G  ALVTG  +G+G E  +    R  K                   K  GS  DA+ 
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS--DAAC 83
Query: 59  RAEREKLMKQVSSLFN------GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
                 +++ +  +F       GKL+I+ +N G   +     +   E+   + + N    
Sbjct: 84  VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQ 142
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCG-VLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           + +++ A+  L+    G +IL+ S+ G   +     +Y+ +KGA+   A+ +A + A   
Sbjct: 143 FFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 200
Query: 172 IRINSVAPWFITTPLTEPY----------LSDEKFLEEVKCR-TPMERPGEPKEVSSLVA 220
           I +N VAP  I T +              LS+E+  E    + +P+ R G P +++ +V 
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 260
Query: 221 FLCMPAASYITGQTICVDGG 240
           FL      ++TG+ I +DGG
Sbjct: 261 FLASNDGGWVTGKVIGIDGG 280

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 34/251 (13%)
Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNEC----LREWKTKCFKVT 50
           SL G TA VTGG++G+G                   N AE  +     + +   +   + 
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87
Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
               DA   A  + + + V +L  G L+IL+N+ G  + + P  E    D   + + NF 
Sbjct: 88  ADNRDA--EAIEQAIRETVEAL--GGLDILVNSAGI-WHSAPLEETTVADFDEVXAVNFR 142
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
           + +   + A   L     G II + S    L    G ++Y+A+K A+  L K LA +   
Sbjct: 143 APFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGP 200
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I +N V P    +  T+   +D    E  + R      GEP++++ LVA+L  P   +
Sbjct: 201 RGITVNIVHP---GSTDTDXNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKF 257
Query: 230 ITGQTICVDGG 240
           +TG ++ +DGG
Sbjct: 258 VTGASLTIDGG 268

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 46/269 (17%)
Query: 14  SLQGMTALVTGGTKGLG--------------------------------NEAELNECLRE 41
           SLQG  A +TG  +G G                                +  +L+E  R 
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 42  WKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL 101
            + +  K    V D    A   +L+      F G+L++++ N G   +     E   E  
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGV-LSWGRVWELTDEQW 129
Query: 102 SFLMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
             ++  N    +   +   P +++A   G+I++VSS  G+ +T     Y+A+K  +  L 
Sbjct: 130 DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALT 189
Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE---VKCRTPMERPGEP----- 212
             LA E     IR+NS+ P+ + TP+ EP    E F      V    PM  P +P     
Sbjct: 190 NTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM--PVQPNGFMT 247
Query: 213 -KEVSSLVAFLCMPAASYITGQTICVDGG 240
             EV+ +VA+L    +  +TG  I VD G
Sbjct: 248 ADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           +V   VCD +S    + L+ Q      G+L++L+NN G    T P V+   E+   +++ 
Sbjct: 74  RVEAVVCDVTSTEAVDALITQTVE-KAGRLDVLVNNAGLGGQT-PVVDMTDEEWDRVLNV 131
Query: 108 NFESAYHLSQLAHPLLKASGAGNIILV-SSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
              S    ++ A    +    G +I+  +SV G  + +  + YAA K  +  L +  A E
Sbjct: 132 TLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
                +RIN+V+P        E   S E  L+ +       R  EP EV++ +AFL    
Sbjct: 192 AVEFGVRINAVSPSIARHKFLEKTSSSE-LLDRLASDEAFGRAAEPWEVAATIAFLASDY 250
Query: 227 ASYITGQTICV 237
           +SY+TG+ + V
Sbjct: 251 SSYMTGEVVSV 261

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 19  TALVTGGTKGLGNEAEL---------------NECLREWKTKCFK-------VTGSVCDA 56
           T ++TG + G+G    +               +E L E +    K       V   V D 
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67
Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST---NFESAY 113
           ++   +++++      F GK+++L+NN G             + +     T   N ++  
Sbjct: 68  TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126
Query: 114 HLSQLAHPLLKASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            +++   P L AS  G I+ VSS V G  +      YA  K A++Q  ++ A + A+  I
Sbjct: 127 EMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185
Query: 173 RINSVAPWFITTPLTE----PYLSDEK---FLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           R+NSV+P  + T  T     P  + +K   F+   K   P+   G+P+ +++++ FL   
Sbjct: 186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245
Query: 226 AAS-YITGQTICVDGG 240
             S YI GQ+I  DGG
Sbjct: 246 NLSFYILGQSIVADGG 261

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 98/254 (38%), Gaps = 29/254 (11%)
Query: 15  LQGMTALVTGGTKGLGNEAEL-------------------NECLREWKTKCFKVTGSVCD 55
           L+G  A+VTG + G+G  A L                    E   E      +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
               A  E L++     F G L+   NN G             E     + TN  SA+  
Sbjct: 66  VGDEALHEALVELAVRRFGG-LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIRI 174
           ++   P + A G G++   SS  G  +   G   YAA+K  +  L + LA E     IR+
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184
Query: 175 NSVAPWFITTP-----LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           N++ P    TP     L         F+E +     ++R   P+E++    +L    AS+
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHA---LKRIARPEEIAEAALYLASDGASF 241
Query: 230 ITGQTICVDGGFTV 243
           +TG  +  DGG +V
Sbjct: 242 VTGAALLADGGASV 255

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 26/246 (10%)
Query: 15  LQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCF--KVTGSVCDASS 58
           L G TALVTG  +G+G                +++N    +        K      D S 
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---LMSTNFESAYHL 115
               + L  ++ +L  G ++IL+NN     +  P V +   DL     ++  N    + +
Sbjct: 64  PGSVKALFAEIQAL-TGGIDILVNNA----SIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118
Query: 116 SQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           ++      +A+G AG +I ++S      T     Y A KG +    + LA E  + NI  
Sbjct: 119 TRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  I +   +    +E F   V+     +  G+P+ ++ +V+FL    A +ITGQT
Sbjct: 179 NAVTPGLIESDGVKASPHNEAF-GFVEXLQAXKGKGQPEHIADVVSFLASDDARWITGQT 237
Query: 235 ICVDGG 240
           + VD G
Sbjct: 238 LNVDAG 243

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S   +    ++ +   F G L+I++ N G N    P  +    +    ++ N    +
Sbjct: 84  ADVSDELQXRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTF 142
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA--KNLACEWARDN 171
               L  P LK  G G I++VSS+ G  +       A T     Q+A  + LA E  + +
Sbjct: 143 LTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHH 202
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-----------RPGEPKEVSSLVA 220
           IR+N+V P  I T +++    + K   E +   P+E           +PG  ++V+ L+ 
Sbjct: 203 IRVNAVCPGAIETNISD----NTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIR 258
Query: 221 FLCMPAASYITGQTICVDGG 240
           FL    A ++TG  + +DGG
Sbjct: 259 FLVSERARHVTGSPVWIDGG 278

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 34/254 (13%)
Query: 15  LQGMTALVTGGTKGLG--------NEAEL-----NECLREWKTKCFKVTGSVCDASSRAE 61
           L+G  ALVTG ++G+G        N+  L          E +   +++  +   A S   
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 62  REKLMKQVSSLFNG------------KLNILINNVGTN---YTTKPTVEYMAEDLSFLMS 106
             + +  V +L++             K +ILINN G     +  + T ++        +S
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR----XVS 120
Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            N ++ + + Q A   L+ +    II +SS    +S      Y+ TKGA+N     LA +
Sbjct: 121 VNAKAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQ 178
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
                I +N++ P F+ T      LSD    +     +   R GE ++++   AFL  P 
Sbjct: 179 LGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASPD 238
Query: 227 ASYITGQTICVDGG 240
           + ++TGQ I V GG
Sbjct: 239 SRWVTGQLIDVSGG 252

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 28/245 (11%)
Query: 21  LVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           L+TGG++G+G                    N A  +E +R+ +    +      D +   
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKER 88
Query: 61  EREKLMKQVSSLFNGKLNILINNVGT-NYTTKP---TVEYMAEDLSFLMSTNFESAYHLS 116
           E     + V +   G+L+ L+NN G  + TT+    T+E +       +  +F  A    
Sbjct: 89  EVLAXFETVDAQL-GRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREAV 147
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIRIN 175
           +        SG G+I+ VSS    L +    + YAA KGA++     LA E A + IR+N
Sbjct: 148 KRXSTRYGGSG-GSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVN 206
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           +V P  I T +        +   +V  + P +R G  +EV+  + +L    ASY TG  +
Sbjct: 207 AVRPGIIETDIHASGGLPNR-ARDVAPQVPXQRAGTAREVAEAIVWLLGDQASYTTGALL 265
Query: 236 CVDGG 240
            V GG
Sbjct: 266 DVTGG 270

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G ++ L+ N G  +     ++   ED   +++ N   A+  ++ A P +   G G I+ +
Sbjct: 102 GGVDKLVANAGVVHLAS-LIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNL 160
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD- 193
           SS+ G ++      Y  +K  + QL++  A E     IR N++ P F+ TP+ +  ++  
Sbjct: 161 SSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMF 220
Query: 194 EKFLEEVKCRTPME----RPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
           +  L     R+ +     R   P+E++ +V FL    AS ITG T   DGG
Sbjct: 221 DGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+++ILIN    N+   P           +M  +    +++S++ +        G I+ +
Sbjct: 104 GRIDILINCAAGNFLC-PAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNI 162
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFIT-TPLTEPYLSD 193
           ++  G     L     + K A++ + ++LA EW   NIR+NS+AP  I+ T         
Sbjct: 163 TATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP 222
Query: 194 EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
           +  L      +P++R G   E++  V +L  P ASY+TG  +  DGG
Sbjct: 223 QASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG 269

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 37/243 (15%)
Query: 20  ALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG---- 75
            +VTGG  G+G +  L + L      CF        A    ER  L       F+G    
Sbjct: 5   VIVTGGGHGIGKQICL-DFLEAGDKVCFIDIDEKRSADFAKERPNLF-----YFHGDVAD 58
Query: 76  ----------------KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
                           ++++L+NN     +       + E+  +++S   ++ Y LS+L 
Sbjct: 59  PLTLKKFVEYAMEKLQRIDVLVNN-ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLC 117
Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
              L     G II ++S     S      YA+ KG +  L   LA     D + +N +AP
Sbjct: 118 RDEL-IKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAP 175
Query: 180 WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG 239
            +I   +TE     ++F +E     P  + G PK++S++V FLC     +ITG+TI VDG
Sbjct: 176 GWIN--VTE----QQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQ--QDFITGETIIVDG 227
Query: 240 GFT 242
           G +
Sbjct: 228 GMS 230

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 30/250 (12%)
Query: 15  LQGMTALVTGGTKGLGNEA------------------------ELNECLREWKTKCFKVT 50
           L+   ALVTGG  G+G  A                        ++   + E   K   + 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
           G + D S    R  + K   +L  G L+IL    G         +  +E      + N  
Sbjct: 107 GDLSDESF--ARSLVHKAREAL--GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           + + ++Q A PLL   GA +II  SS+     +     YAATK A+   ++ LA + A  
Sbjct: 163 ALFWITQEAIPLLP-KGA-SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220
Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            IR+N VAP  I T L       +  + +   +TPM+R G+P E++ +  +L    +SY+
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV 280
Query: 231 TGQTICVDGG 240
           T +   V GG
Sbjct: 281 TAEVHGVCGG 290

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 34  ELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT 93
           ++NE   +   K   +   V D + + + ++   +V      +L++L N  G  +    T
Sbjct: 37  DINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE-----RLDVLFNVAG--FVHHGT 89
Query: 94  V-EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNII----LVSSVCGVLSTNLGTI 148
           V +   +D  F M+ N  S Y + +   P + A  +GNII    + SSV GV++     +
Sbjct: 90  VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNR---CV 146
Query: 149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC----RT 204
           Y+ TK A+  L K++A ++ +  IR N V P  + TP  +  +      EE +     R 
Sbjct: 147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ 206
Query: 205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
              R    +E++ L  +L    ++Y+TG  + +DGG+++
Sbjct: 207 KTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 7/192 (3%)
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
           S  E  +L++ V+S   G ++IL++N       +P  +Y  ED   ++       + L+ 
Sbjct: 55  SEQEPVELIEAVTSAL-GHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALAN 113
Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
                +K   +G+II ++S          + YA+ +   + LA  L+ E    NI + ++
Sbjct: 114 AVASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAI 173
Query: 178 APWFITT---PL---TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           AP  + +   P    +EP+ +  + +  V+  T ++R G  KE+  LV FL   +  Y+T
Sbjct: 174 APNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASGSCDYLT 233
Query: 232 GQTICVDGGFTV 243
           GQ   + GGF V
Sbjct: 234 GQVFWLAGGFPV 245

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL-SFLMSTNFESA 112
            D ++ AE E  +   +  F G+++ L++  G     + T+  M E     ++  N  S 
Sbjct: 65  ADLTNAAEVEAAISAAADKF-GEIHGLVHVAG-GLIARKTIAEMDEAFWHQVLDVNLTSL 122
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDN 171
           +  ++ A P +   GA  I+  SS  G      G + YA +KGA+    + LA E     
Sbjct: 123 FLTAKTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG-PK 179
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           IR+N+V P  I+T   + +   E   E V   T ++R G  ++V+ LVAFL    A+Y+T
Sbjct: 180 IRVNAVCPGMISTTFHDTFTKPE-VRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVT 238
Query: 232 GQTICVDGG 240
           G    ++GG
Sbjct: 239 GACYDINGG 247

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 53  VCDASSRAER-EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           V DA+  A+  ++L+ +       +L+ L+N  G       T +   ED     + N   
Sbjct: 55  VADAAQVAQVCQRLLAETE-----RLDALVNAAGI-LRMGATDQLSKEDWQQTFAVNVGG 108
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           A++L Q      +    G I+ V+S          + Y A+K A+  LA ++  E A   
Sbjct: 109 AFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSG 168
Query: 172 IRINSVAPWFITTPLTEP-YLSDEK-------FLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +R N V+P    T +    ++SD+        F E+ K   P+ +   P+E+++ + FL 
Sbjct: 169 VRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228
Query: 224 MPAASYITGQTICVDGGFTVN 244
              AS+IT Q I VDGG T+ 
Sbjct: 229 SDLASHITLQDIVVDGGSTLG 249

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------EAELNECLREWKTKCFKVTGSVC--DASS 58
           L G  A+VTG  +G+G                 ++            KV G+    D ++
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTA 262
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFESAYHLS 116
               +K+ + +     GK +IL+NN G    T+  +    +D  +  +++ N  +   L+
Sbjct: 263 DDAVDKISEHLRDHHGGKADILVNNAGI---TRDKLLANMDDARWDAVLAVNLLAPLRLT 319
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +           G +I +SS+ G+      T YA TK  M  + + LA   A   I IN+
Sbjct: 320 EGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINA 379
Query: 177 VAPWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           VAP FI T +T   P  +      EV  R   + + G+P +V+  +A+   PA++ +TG 
Sbjct: 380 VAPGFIETQMTAAIPLAT-----REVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGN 434
Query: 234 TICV 237
            I V
Sbjct: 435 VIRV 438

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           T+Y   K A+  L ++ A E A   IR+N V+P     P   P+   E +  +V      
Sbjct: 193 TMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQEDYRRKVPL---Y 249
Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           +R    +EVS +V FLC P A YITG  I VDGG+++
Sbjct: 250 QRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSL 286

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------EAELNECLREWKTKCFKVTGSVC--DASS 58
           L G  A+VTG  +G+G                 ++            KV G+    D ++
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTA 270
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFESAYHLS 116
               +K+ + +     GK +IL+NN G    T+  +    +D  +  +++ N  +   L+
Sbjct: 271 DDAVDKISEHLRDHHGGKADILVNNAGI---TRDKLLANMDDARWDAVLAVNLLAPLRLT 327
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +           G +I +SS+ G+      T YA TK  M  + + LA   A   I IN+
Sbjct: 328 EGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINA 387
Query: 177 VAPWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           VAP FI T +T   P  +      EV  R   + + G+P +V+  +A+   PA++ +TG 
Sbjct: 388 VAPGFIETQMTAAIPLAT-----REVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGN 442
Query: 234 TICV 237
            I V
Sbjct: 443 VIRV 446

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 35/258 (13%)
Query: 19  TALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
            A+VTGG +G+G                      E +  E ++  +    K      D +
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
            +A  +  + + +    G  ++L+NN G     KP +E   EDL  + S N  S +   Q
Sbjct: 64  DKANFDSAIDEAAEKLGG-FDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 118 LAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
            A       G  G II  +S+  +    + + Y+ TK A+  L +  A E A     +N+
Sbjct: 122 AASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNA 181
Query: 177 VAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
            AP  + T + E   ++          E F +E      + RP  P++V+ LV+FL    
Sbjct: 182 YAPGIVGTGMWEQIDAELSKINGKPIGENF-KEYSSSIALGRPSVPEDVAGLVSFLASEN 240
Query: 227 ASYITGQTICVDGGFTVN 244
           ++Y+TGQ + VDGG   N
Sbjct: 241 SNYVTGQVMLVDGGMLYN 258

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------EAELNECLREWKTKCFKVTGSVC--DASS 58
           L G  A+VTG  +G+G                 ++            KV G+    D ++
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTA 278
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFESAYHLS 116
               +K+ + +     GK +IL+NN G    T+  +    +D  +  +++ N  +   L+
Sbjct: 279 DDAVDKISEHLRDHHGGKADILVNNAGI---TRDKLLANMDDARWDAVLAVNLLAPLRLT 335
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +           G +I +SS+ G+      T YA TK  M  + + LA   A   I IN+
Sbjct: 336 EGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINA 395
Query: 177 VAPWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           VAP FI T +T   P  +      EV  R   + + G+P +V+  +A+   PA++ +TG 
Sbjct: 396 VAPGFIETQMTAAIPLAT-----REVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGN 450
Query: 234 TICV 237
            I V
Sbjct: 451 VIRV 454

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------EAELNECLREWKTKCFKVTGSVC--DASS 58
           L G  A+VTG  +G+G                 ++            KV G+    D ++
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTA 254
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFESAYHLS 116
               +K+ + +     GK +IL+NN G    T+  +    +D  +  +++ N  +   L+
Sbjct: 255 DDAVDKISEHLRDHHGGKADILVNNAGI---TRDKLLANMDDARWDAVLAVNLLAPLRLT 311
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +           G +I +SS+ G+      T YA TK  M  + + LA   A   I IN+
Sbjct: 312 EGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINA 371
Query: 177 VAPWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           VAP FI T +T   P  +      EV  R   + + G+P +V+  +A+   PA++ +TG 
Sbjct: 372 VAPGFIETQMTAAIPLAT-----REVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGN 426
Query: 234 TICV 237
            I V
Sbjct: 427 VIRV 430

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 15  LQGMTALVTGGTKGLGN--------------EAELNECLREWKTKCFKVTGSVC--DASS 58
           L G  A+VTG  +G+G                 ++            KV G+    D ++
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTA 291
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF--LMSTNFESAYHLS 116
               +K+ + +     GK +IL+NN G    T+  +    +D  +  +++ N  +   L+
Sbjct: 292 DDAVDKISEHLRDHHGGKADILVNNAGI---TRDKLLANMDDARWDAVLAVNLLAPLRLT 348
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +           G +I +SS+ G+      T YA TK  M  + + LA   A   I IN+
Sbjct: 349 EGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINA 408
Query: 177 VAPWFITTPLTE--PYLSDEKFLEEVKCR-TPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           VAP FI T +T   P  +      EV  R   + + G+P +V+  +A+   PA++ +TG 
Sbjct: 409 VAPGFIETQMTAAIPLAT-----REVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGN 463
Query: 234 TICV 237
            I V
Sbjct: 464 VIRV 467

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 14/195 (7%)
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT------NYTTKPTVEYMAEDLSFLM 105
           SV    S  E  K M   +    G ++ L+NN         ++      EY  +     M
Sbjct: 62  SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKK----FM 117
Query: 106 STNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLAC 165
           S N + A   ++  +  +   G G I+  SS    L +N    Y   K  +N L + L+ 
Sbjct: 118 SVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGINGLTQQLSR 174
Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           E    NIRIN++AP  I T         E  ++++    P+ R G P ++  +  FL   
Sbjct: 175 ELGGRNIRINAIAPGPIDTEANRTTTPKE-MVDDIVKGLPLSRMGTPDDLVGMCLFLLSD 233
Query: 226 AASYITGQTICVDGG 240
            AS+ITGQ   VDGG
Sbjct: 234 EASWITGQIFNVDGG 248

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 16  QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG------------------------ 51
            G  A+VTG   GLG E  L    R  K     + G                        
Sbjct: 18  DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG 77
Query: 52  -SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
            +V D +S  +  K+++     F G+++IL+NN G     +  V+   +D + +   + +
Sbjct: 78  EAVADYNSVIDGAKVIETAIKAF-GRVDILVNNAGI-LRDRSLVKTSEQDWNLVNDVHLK 135
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWAR 169
            ++  +Q A P +K    G II+ SS  G+   N G + Y A K  +  LA  +A E AR
Sbjct: 136 GSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG-NFGQVNYTAAKMGLIGLANTVAIEGAR 194
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +N+  N + P    + +TE  L D  F  E+K          PK ++ +VA+LC
Sbjct: 195 NNVLCNVIVPT-AASRMTEGILPDILF-NELK----------PKLIAPVVAYLC 236

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 30  GNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYT 89
           G  A   E   + +    K   +  D S  A   +L       F G +++L+NN G    
Sbjct: 60  GKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG-VDVLVNNAGIXPL 118
Query: 90  TKPTVEYMAE--DLSF--LMSTNFESAYHLSQLAHPLLKASGAGNIILVS-SVCGVLSTN 144
           T      +AE  D  F  +++ N +  ++  + A   L+  G   II  S S  G+L  +
Sbjct: 119 TT-----IAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGG--RIINXSTSQVGLLHPS 171
Query: 145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT 204
            G IYAA K  +      L+ E    +I +N+VAP    T L     SDE   +      
Sbjct: 172 YG-IYAAAKAGVEAXTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE-VRDRFAKLA 229
Query: 205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           P+ER G P++++  VAFL  P  +++ GQ +  +GG 
Sbjct: 230 PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 30/201 (14%)
Query: 61  EREKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
           +RE L   + +  +  G+L+I++ N G    +        +    ++  N    YH  ++
Sbjct: 85  DRESLSAALQAGLDELGRLDIVVANAGIAPMSAGD-----DGWHDVIDVNLTGVYHTIKV 139
Query: 119 AHP-LLKASGAGNIILVSS---VCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNIR 173
           A P L+K    G+I+L+SS   + GV S + G++ Y A K  +  L +  A   A   IR
Sbjct: 140 AIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIR 199
Query: 174 INSVAPWFITTPLTEPYLSDEKFLEE--VKCRTPMERPGE-----------PKEVSSLVA 220
           +NS+ P  + TP+      + +F  E   K     + PG            P++V++ VA
Sbjct: 200 VNSIHPSGVETPMI-----NNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVA 254
Query: 221 FLCMPAASYITGQTICVDGGF 241
           +L    A YITG T+ VD GF
Sbjct: 255 WLVSDQARYITGVTLPVDAGF 275

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 34  ELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ-VSSLFNGKLNILINNVGTNYTTKP 92
           +L+E +R  +    ++  +V D        K++   V++L  G+L+I++ N G     + 
Sbjct: 60  DLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAAL--GRLDIIVANAGV-AAPQA 116
Query: 93  TVEYMAEDLSFLMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAA 151
             +   ED   +M  N    ++      P +++    G+IIL+SS  G+        Y A
Sbjct: 117 WDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTA 176
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL--------------TEPYLSD--EK 195
           +K A+  LA+  A E  + +IR+NSV P  + TP+              T P LS     
Sbjct: 177 SKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP 236
Query: 196 FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
           FL +           EP++++  V +L    +  +T   I VD G T
Sbjct: 237 FLPDWVA--------EPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIIL 133
           G+L+I++ N G         +   ED + ++  N    +   +   P + A G  G+IIL
Sbjct: 103 GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL 162
Query: 134 VSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
            SSV G+ +      Y A K  +  L +    E  +  IR+NSV P  + TP+    L +
Sbjct: 163 TSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM----LHN 218
Query: 194 EKFLEEVKCRTPMERPG-------------------EPKEVSSLVAFLCMPAASYITGQT 234
           E   +    R  +E PG                   EP ++S+ V F     A YITG T
Sbjct: 219 EGTFK--MFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVT 276
Query: 235 ICVDGG 240
           + +D G
Sbjct: 277 LPIDAG 282

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 103 FLMSTNFESAYHLSQL---AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL 159
           FL++ N  S+Y L+ +   A P++  +  G+I+ ++ + G L      +    K +++  
Sbjct: 115 FLLAHNI-SSYSLTAVVKAARPMM--TEGGSIVTLTYLGGELVMPNYNVMGVAKASLDAS 171
Query: 160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSSL 218
            K LA +  ++NIR+NS++   I T L+   +SD    L++++ R P+ R   P+EV   
Sbjct: 172 VKYLAADLGKENIRVNSISAGPIRT-LSAKGISDFNSILKDIEERAPLRRTTTPEEVGDT 230
Query: 219 VAFLCMPAASYITGQTICVDGGFTV 243
            AFL    +  ITG+ + VD GF +
Sbjct: 231 AAFLFSDMSRGITGENLHVDSGFHI 255

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 45  KCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL 104
           + F  T       S  E  +L++ V+S + G++++L++N       +P  +Y  ED    
Sbjct: 42  EAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGA 100
Query: 105 MSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA 164
           +       + L       +K   +G+II ++S          + Y + +     LA  L+
Sbjct: 101 VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALS 160
Query: 165 CEWARDNIRINSVAPWFI---TTPL---TEPYLSDEKFLEEVKCRTPMERPGEPKEVSSL 218
            E    NI + ++ P ++    +P    TEP+ ++ + +  VK  T ++R G  KE+  L
Sbjct: 161 KELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGEL 220
Query: 219 VAFLCMPAASYITGQTICVDGGFTV 243
           VAFL   +  Y+TGQ   + GGF +
Sbjct: 221 VAFLASGSCDYLTGQVFWLAGGFPM 245

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLM 105
           KV    CD     + + +   VS L    G  NI+INN   N+ + PT          + 
Sbjct: 77  KVHAIQCDVR---DPDMVQNTVSELIKVAGHPNIVINNAAGNFIS-PTERLSPNAWKTIT 132
Query: 106 STNFE-SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA 164
                 +A+   ++   L+KA      + ++++     +      A+ K  +  ++K+LA
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLA 192
Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDE-KFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
            EW +  +R N + P  I T      L     F +E+  R P  R G  +E+++L AFLC
Sbjct: 193 AEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC 252
Query: 224 MPAASYITGQTICVDGG 240
              AS+I G  I  DGG
Sbjct: 253 SDYASWINGAVIKFDGG 269

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 111/263 (42%), Gaps = 34/263 (12%)
Query: 15  LQGMTALVTGGTKGLGNE------------AELN---ECLREWKTKCFK-VTGSVCDASS 58
           L+G   L+TGG  GLG              A L+   E L E +T     V G V D  S
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAE--DLSF--LMSTNFESAY 113
             ++++   +  + F GK++ LI N G  +Y+T   V+   E  D +F  +   N +   
Sbjct: 63  LEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTA-LVDLPEESLDAAFDEVFHINVKGYI 120
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           H  +   P L AS  GN+I   S  G      G +Y A K A+  L + LA E A   +R
Sbjct: 121 HAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVR 178
Query: 174 INSVAPWFITTPLTEP--------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           +N V    I + L  P         +S     + +K   P+ R  E +E +    F    
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR 238
Query: 226 A-ASYITGQTICVDGGFTVNGFF 247
             A+  TG  +  DGG  V GFF
Sbjct: 239 GDAAPATGALLNYDGGLGVRGFF 261

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 36/264 (13%)
Query: 15  LQGMTALVTGGTKGLGNE------------AELN---ECLREWKT-KCFKVTGSVCDASS 58
           L G  AL+TGG  GLG              A L+   E LRE +        G V D  S
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS 62
Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGT-NYTTKPTVEYMAED-----LSFLMSTNFESA 112
             ++++  ++  + F GK++ LI N G  +Y+T   +  + ED        +   N +  
Sbjct: 63  LQDQKRAAERCLAAF-GKIDTLIPNAGIWDYST--ALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            H  +   P L +S  G+++   S  G      G +Y ATK A+  L + +A E A  ++
Sbjct: 120 IHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA-PHV 177
Query: 173 RINSVAPWFITTPLTEP--------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           R+N VAP  + T L  P         +S     + +K   P+ R    +E +    F   
Sbjct: 178 RVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFAT 237
Query: 225 PAASY-ITGQTICVDGGFTVNGFF 247
              S   TG  +  DGG  V GF 
Sbjct: 238 RGDSLPATGALLNYDGGMGVRGFL 261

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 21  LVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK-------QVSSLF 73
           LVTGG+KG+G      E L + K     V       S  AE  K +K        ++++ 
Sbjct: 8   LVTGGSKGIGKAVV--ELLLQNKNHT--VINIDIQQSFSAENLKFIKADLTKQQDITNVL 63
Query: 74  NGKLNILINNVGTN---YTTKPTVEYMAEDLSFLMSTN-FESAYHLSQLAHPLLKASGAG 129
           +   N+  + +  N          +   E +  ++  N + S Y +  L + L    GA 
Sbjct: 64  DIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL--KVGAS 121
Query: 130 NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP 189
            +   S  C +   N    Y  +KGA+ Q  K+LA + A+  IR+N+V P  + T L   
Sbjct: 122 IVFNGSDQCFIAKPN-SFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRN 180
Query: 190 YLS----------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG 239
            +           DE   +E K   P+ R  +P+E++ LV FL    + + TG  I +DG
Sbjct: 181 LIQKYANNVGISFDEAQKQEEK-EFPLNRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDG 239
Query: 240 GFT 242
           G+T
Sbjct: 240 GYT 242

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 30/240 (12%)
Query: 6   DHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC 46
           D D +   SL G  A+VTG ++G+G                   +  +L    RE     
Sbjct: 18  DDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG 77
Query: 47  FKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS 106
            +     CD S           V +  +G+ ++L+NN G  +   P       +   L++
Sbjct: 78  GEAESHACDLSHSDAIAAFATGVLA-AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136
Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            N ++ Y L +   P + A+  G+II +SS+ G      G  Y A+K  +N L  + A E
Sbjct: 137 VNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEE 196
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
             +  +R++ VAP  + T       + +  L  +          EP +++ +VA L   A
Sbjct: 197 LRQHQVRVSLVAPGSVRTEFGVGLSAKKSALGAI----------EPDDIADVVALLATQA 246

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 35/206 (16%)
Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           +CD +   + + L+ +    F G+L+ ++NN G +   +   E               SA
Sbjct: 60  LCDVTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEE--------------TSA 104
Query: 113 YHLSQ--------------LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ 158
               Q              LA P L+ S  GN+I +SS+ G +       Y ATKGA+  
Sbjct: 105 QGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA 163
Query: 159 LAKNLACEWARDNIRINSVAPWFITTPLTE---PYLSDEKF-LEEVKCRTPMERPGEPKE 214
           + K LA + +   +R+N ++P  I TPL E     + D +  + E     P+ R G+P E
Sbjct: 164 MTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAE 223
Query: 215 VSSLVAFLCMPAASYITGQTICVDGG 240
           V +   FL    A++ TG  + V GG
Sbjct: 224 VGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 75  GKLNILINNVGTNYTTK----------PTV---EYMAEDLSFLMSTNFESAYHLSQ-LAH 120
           G+ ++L+NN  + Y T           P V   E M    + L  +N  + Y L +  AH
Sbjct: 101 GRCDVLVNNASSFYPTPLLRKDEDGHVPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAH 160
Query: 121 PLLKASG---AGNIILVSSVCGVLSTNL--GTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +          N  +V+ V  + S  L   TIY   KGA+  L ++ A E A   IR+N
Sbjct: 161 RVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVN 220
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQT 234
            V P         P        E+ + + P+ +R     EVS +V FLC   A Y+TG  
Sbjct: 221 GVGPGLSVLADDMP----PAVREDYRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTC 276
Query: 235 ICVDGGFTV 243
           + VDGG+++
Sbjct: 277 VKVDGGYSL 285

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 34  ELNECLREWKTKCFKVTGSVCDASS-RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP 92
           +L E +R+ +    ++  S  D     A +  +   V+ L  G+L+I++ N         
Sbjct: 76  DLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQL--GRLDIVLANAALASEGTR 133
Query: 93  TVEYMAEDLSFLMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVL-STNLGTIYA 150
                 +    ++  N   A+  +++A P ++     G+I+  SS+ G+  + N+G  Y 
Sbjct: 134 LNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGN-YI 192
Query: 151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP--LTEP-YLSDEKFLE-------EV 200
           A+K  ++ L + +A E    NIR+N V P  + TP  L EP Y      LE       +V
Sbjct: 193 ASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQV 252
Query: 201 KCRTPMERP---GEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
             R     P    EP ++S+ + FL    A YITG ++ VDGG
Sbjct: 253 ASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 33/256 (12%)
Query: 15  LQGMTALVTGGTKGLG---------NEAEL------NECLREWKTKCFK-VTGSVCDASS 58
           +QG  A+VT G+ GLG         N A L       E L    ++    V+G+  D  +
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 59  RAERE-----KLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
              RE     +L ++   L  G  +IL+ + G     +  +E   ED          SA 
Sbjct: 65  GDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGR-FMELGVEDWDESYRLLARSAV 121
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            + + A   +   G G ++ + SV  +       +    +  +  + + LA E A   + 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 174 INSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           +N+V P  I T               ++ E+ L+ +  R PM R G+P+E++S+VAFL  
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241
Query: 225 PAASYITGQTICVDGG 240
             AS+ITG  I VDGG
Sbjct: 242 EKASFITGAVIPVDGG 257

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 100/257 (38%), Gaps = 35/257 (13%)
Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTG  +G+G                   N+A       E             D S R
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            +    ++Q      G  ++++NN G   +T P      E +  + + N +      Q A
Sbjct: 64  DQVFAAVEQARKTLGG-FDVIVNNAGVAPST-PIESITPEIVDKVYNINVKGVIWGIQAA 121
Query: 120 HPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
               K  G  G II   S  G +      +Y+++K A+  L +  A + A   I +N   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181
Query: 179 PWFITTPLTEPYLSDEKFLE-----------EVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           P  + TP+      D +  E           E   R  + R  EP++V++ V++L  P +
Sbjct: 182 PGIVKTPMWAEI--DRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS 239
Query: 228 SYITGQTICVDGGFTVN 244
            Y+TGQ++ +DGG   N
Sbjct: 240 DYMTGQSLLIDGGMVFN 256

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLM 105
           KV    CD     + + +   VS L    G  NI+INN   N+ + PT          + 
Sbjct: 77  KVHAIQCDVR---DPDXVQNTVSELIKVAGHPNIVINNAAGNFIS-PTERLSPNAWKTIT 132
Query: 106 STNFE-SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA 164
                 +A+   ++   L+KA      + ++++     +      A+ K  +   +K+LA
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLA 192
Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDE-KFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
            EW +   R N + P  I T      L     F +E   R P  R G  +E+++L AFLC
Sbjct: 193 AEWGKYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLC 252
Query: 224 MPAASYITGQTICVDGG 240
              AS+I G  I  DGG
Sbjct: 253 SDYASWINGAVIKFDGG 269

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ +  S+Y L+ +AH   K     G+I+  + + G  +     +    K ++    K
Sbjct: 114 FLLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVK 172
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +   DNIR+N+++   I T   +        L+E+K R P++R  +  EV    A+
Sbjct: 173 YLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAY 232
Query: 222 LCMPAASYITGQTICVDGGF 241
           L    +S +TG+ I VD GF
Sbjct: 233 LLSDLSSGVTGENIHVDSGF 252

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE-DLSFLMSTNFE 110
           +V D ++  + +K+++     F G ++++INN G       +++ M E D   ++  +  
Sbjct: 68  AVADYNNVLDGDKIVETAVKNF-GTVHVIINNAGI--LRDASMKKMTEKDYKLVIDVHLN 124
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWAR 169
            A+ +++ A P  +    G I+  SS  G L  N G   YA+ K A+   A+ LA E A+
Sbjct: 125 GAFAVTKAAWPYFQKQKYGRIVNTSSPAG-LYGNFGQANYASAKSALLGFAETLAKEGAK 183
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NI+ N++AP           L+  +  E +     +E+ G P++V+ LV +L   A + 
Sbjct: 184 YNIKANAIAP-----------LARSRMTESIMPPPMLEKLG-PEKVAPLVLYLS-SAENE 230
Query: 230 ITGQTICVDGGF 241
           +TGQ   V  GF
Sbjct: 231 LTGQFFEVAAGF 242

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 46/269 (17%)
Query: 15  LQGMTALVTGGTKGLGN-------------------EAELNECLREWKTKCFK--VTGSV 53
           L+G TALVTG T G+G                    E  +NE ++E + +     +   V
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFE 110
            D  +    + ++++       K++ILINN+G     +P VEY     ED   L   N  
Sbjct: 68  ADLGTEQGCQDVIEKYP-----KVDILINNLG---IFEP-VEYFDIPDEDWFKLFEVNIX 118
Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           S   L++           G +I ++S   +  +     Y+ATK     L+++LA      
Sbjct: 119 SGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGT 178
Query: 171 NIRINSVAPWFITTPLTEPYL-------------SDEKFLEEVKCRTPMERPGEPKEVSS 217
           N+ +N++ P    T   E  L             ++++F +E +  + ++R   P+E++ 
Sbjct: 179 NVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAH 238
Query: 218 LVAFLCMPAASYITGQTICVDGGFTVNGF 246
           LV FL  P +S I G  + +DGG   + F
Sbjct: 239 LVTFLSSPLSSAINGSALRIDGGLVRSVF 267

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ +  S+Y L+ +AH   K     G+I+  + + G  +     +    K ++    K
Sbjct: 135 FLLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVK 193
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +   DNIR+N+++   I T   +        L+E++ R P++R  +  EV    A+
Sbjct: 194 YLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAY 253
Query: 222 LCMPAASYITGQTICVDGGF 241
           L    +S +TG+ I VD GF
Sbjct: 254 LLSDLSSGVTGENIHVDSGF 273

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 15  LQGMTALVTGGTKGLGNEAELNEC---------------LREWKTKCFKVTGS----VCD 55
           + G   +VTG ++G+G    L  C               LR    +   + G     VCD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINN----VGTNYTTK-----PTVEYMAEDLSFLMS 106
           +S  +E   L +QV     G+L++L+NN    V T   T+      T   M +D++   +
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN---N 119
Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
                 Y  S     L+  +G G I+++SS  G L       Y   K A ++LA + A E
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHE 178
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEE 199
             R  +   S+ P  + T L + +++ E+ L++
Sbjct: 179 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD 211

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ +  S+Y L+ +AH   K     G+I+  + + G  +     +    K ++    K
Sbjct: 114 FLLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVK 172
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +   DNIR+N+++   I T   +        L+E++ R P++R  +  EV    A+
Sbjct: 173 YLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAY 232
Query: 222 LCMPAASYITGQTICVDGGF 241
           L    +S +TG+ I VD GF
Sbjct: 233 LLSDLSSGVTGENIHVDSGF 252

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ +  S+Y L+ +AH   K     G+I+  + + G  +     +    K ++    K
Sbjct: 140 FLLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVK 198
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +   DNIR+N+++   I T   +        L+E++ R P++R  +  EV    A+
Sbjct: 199 YLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAY 258
Query: 222 LCMPAASYITGQTICVDGGF 241
           L    +S +TG+ I VD GF
Sbjct: 259 LLSDLSSGVTGENIHVDSGF 278

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ +  S+Y L+ +AH   K     G+I+  + + G  +     +    K ++    K
Sbjct: 118 FLLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVK 176
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +   DNIR+N+++   I T   +        L+E++ R P++R  +  EV    A+
Sbjct: 177 YLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAY 236
Query: 222 LCMPAASYITGQTICVDGGF 241
           L    +S +TG+ I VD GF
Sbjct: 237 LLSDLSSGVTGENIHVDSGF 256

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 35/257 (13%)
Query: 15  LQGMTALVTGGTKGLGNEAELN--------------------ECLREWKTKCFKVTGSVC 54
           L G  ALVTG  +G+G    ++                    + + E K           
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D     E  KL  Q  + F G L+I ++N G   +     +   E+   + S N    + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 115 LSQLAHPLLKASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +++ A+  L  +  G I+L SS      S    ++Y+ +KGA++   +  + +     I 
Sbjct: 134 VAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKIT 191
Query: 174 INSVAPWFITTPL----TEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +N+VAP    T +    +  Y+ +      E+  +     +P+ R G P++V+++V FL 
Sbjct: 192 VNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV 251
Query: 224 MPAASYITGQTICVDGG 240
                ++ G+ + +DGG
Sbjct: 252 SKEGEWVNGKVLTLDGG 268

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 108/276 (39%), Gaps = 54/276 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------AELNECLR-----------------EWKTKCFK 48
            +G TAL+TGG +G+G           A++  C R                        +
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 49  VTGSVC-----DASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLS 102
            TG  C     D   RA  E  + +      G ++I I N G +     P VE    D  
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGG-IDIAITNAGISTIALLPEVESAQWDE- 125
Query: 103 FLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
            ++ TN    ++      P +     G I+ VSS+ G  +      Y ++K  +  L K 
Sbjct: 126 -VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184
Query: 163 LACEWARDNIRINSVAPWFITTPLT--------------EPYLSDEKFLEEVKCRTPMER 208
            A +     I +N+VAP  I TP+T              +P L D   +E V     ++ 
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKD---VESVFASLHLQY 241
Query: 209 PG--EPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
               +P+EV+  V FL   A+S+ITG  + +D G T
Sbjct: 242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L Q A   L+A+G  ++I ++S  G        +Y   + A   L ++ A   +RD I +
Sbjct: 113 LLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILL 172
Query: 175 NSVAPWFITTPLTEP---YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
            ++ P F   P   P   + ++ +  E V    P+ R G P E+ +L+ FL    A+ I 
Sbjct: 173 YAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIV 232
Query: 232 GQTICVDGGF 241
           GQ     GG+
Sbjct: 233 GQFFAFTGGY 242

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 35/257 (13%)
Query: 15  LQGMTALVTGGTKGLGNEAELN--------------------ECLREWKTKCFKVTGSVC 54
           L G  ALVTG  +G+G    ++                    + + E K           
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D     E  KL  Q  + F G L+I ++N G   +     +   E+   + S N    + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 115 LSQLAHPLLKASGAGNIILVSS-VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +++ A+  L  +  G I+L SS      S    ++++ +KGA++   +  + +     I 
Sbjct: 134 VAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKIT 191
Query: 174 INSVAPWFITTPL----TEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +N+VAP    T +    +  Y+ +      E+  +     +P+ R G P++V+++V FL 
Sbjct: 192 VNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV 251
Query: 224 MPAASYITGQTICVDGG 240
                ++ G+ + +DGG
Sbjct: 252 SKEGEWVNGKVLTLDGG 268

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 30/253 (11%)
Query: 15  LQGMTALVTGGTKGLGN---EAELNE----CLREWKTKCFKVTGSVCDASSRAEREKLMK 67
           L+G +AL+TG  +G+G    EA + E     + +   +  +   +    ++ A +  + +
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTR 65
Query: 68  QVS--------SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA-YHLSQL 118
           Q S            G L+IL+NN    +   P VE   E    L + N     + L   
Sbjct: 66  QDSIDAAIAATVEHAGGLDILVNNAAL-FDLAPIVEITRESYEKLFAINVAGTLFTLQAA 124
Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
           A   +     G II  +S  G     L  IY ATK A+  L ++   +  +  I +N++A
Sbjct: 125 ARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIA 184
Query: 179 P-------WFITTPLTEPY----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           P       W     L   Y      ++K L  V    P  R G  ++++    FL    +
Sbjct: 185 PGVVDGEHWDGVDALFARYENRPRGEKKRL--VGEAVPFGRXGTAEDLTGXAIFLASAES 242
Query: 228 SYITGQTICVDGG 240
            YI  QT  VDGG
Sbjct: 243 DYIVSQTYNVDGG 255

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           TIY   KGA+  L ++ A E A   IR+N V P         P        E  + + P+
Sbjct: 195 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PAVWEGHRSKVPL 250
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            +R     EVS +V FLC   A YITG  + VDGG+++
Sbjct: 251 YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 25/203 (12%)
Query: 9   RQDRWSLQGMTALVTGGTKGLGNEAELN------------------ECLREWKTKC---- 46
           R+    L   T L+TG + G+G    L                   E L E K       
Sbjct: 25  RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF 84
Query: 47  --FKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL 104
              KV  +  D +   + +  ++ +   F   ++IL+NN G    +    +   ED+  +
Sbjct: 85  PNAKVHVAQLDITQAEKIKPFIENLPQEFK-DIDILVNNAGKALGSDRVGQIATEDIQDV 143
Query: 105 MSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLA 164
             TN  +  +++Q   P+ +A  +G+I+ + S+ G  +   G+IY A+K A+     +L 
Sbjct: 144 FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203
Query: 165 CEWARDNIRINSVAPWFITTPLT 187
            E     IR+  +AP  + T  +
Sbjct: 204 KELINTKIRVILIAPGLVETEFS 226

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           TIY   KGA+  L ++ A E A   IR+N V P         P        E  + + P+
Sbjct: 192 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PAVWEGHRSKVPL 247
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            +R     EVS +V FLC   A YITG  + VDGG+++
Sbjct: 248 YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 285

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           TIY   KGA+  L ++ A E A   IR+N V P         P        E  + + P+
Sbjct: 232 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PAVWEGHRSKVPL 287
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            +R     EVS +V FLC   A YITG  + VDGG+++
Sbjct: 288 YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 75  GKLNILINNVGTNYTT----------KPTV---EYMAEDLSFLMSTNFESAYHLSQ-LAH 120
           G+ ++L+NN  + Y T          +P V   E M    + L  +N  + Y L +  AH
Sbjct: 120 GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 179
Query: 121 PLLKASG---AGNIILVSSVCGVLSTNL--GTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +          N  +++ V  + +  L   TIY   KGA+  L ++ A E A   IR+N
Sbjct: 180 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVN 239
Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQT 234
            V P         P        E  + + P+ +R     EVS +V FLC   A YITG  
Sbjct: 240 GVGPGLSVLVDDMP----PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTC 295
Query: 235 ICVDGGFTV 243
           + VDGG+++
Sbjct: 296 VKVDGGYSL 304

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           +V +  S  E EK++K     F G++++++NN G     +       ED   +   +   
Sbjct: 90  AVANYDSVEEGEKVVKTALDAF-GRIDVVVNNAGI-LRDRSFARISDEDWDIIHRVHLRG 147
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           ++ +++ A   +K    G II+ SS  G+        Y+A K  +  LA +LA E  + N
Sbjct: 148 SFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSN 207
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           I  N++AP    + +T+  +  E  +E +K          P+ V+ LV +LC
Sbjct: 208 IHCNTIAP-NAGSRMTQTVMP-EDLVEALK----------PEYVAPLVLWLC 247

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ N  SA+ L+ +A    K  +  GNI+ ++ + G        +    K ++    K
Sbjct: 114 FLLAQNI-SAFSLTAVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVK 172
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +  +  IR+N+++   I T   +        L E++ R P+ R    +EV     F
Sbjct: 173 YLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAVF 232
Query: 222 LCMPAASYITGQTICVDGGFTVNGF 246
           L    A  +TG+ I VD G+ + G 
Sbjct: 233 LFSDLARGVTGENIHVDSGYHILGL 257

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 103 FLMSTNFESAYHLSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           FL++ N  SA+ L+ +A    K  +  GNI+ ++ + G        +    K ++    K
Sbjct: 114 FLLAQNI-SAFSLTAVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVK 172
Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA +  +  IR+N+++   I T   +        L E++ R P+ R    +EV     F
Sbjct: 173 YLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAVF 232
Query: 222 LCMPAASYITGQTICVDGGFTVNG 245
           L    A  +TG+ I VD G+ + G
Sbjct: 233 LFSDLARGVTGENIHVDSGYHILG 256

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  A+  +L   +   + G ++ L+NN G       + +   ED  + M+TN +  +
Sbjct: 65  ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALS-DLTEEDFDYTMNTNLKGTF 122
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            L+Q    L++   +G+I  ++SV    +    +IY  +K     L + +     + N+R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 174 INSVAPWFITTPL 186
           I  V P  + TP+
Sbjct: 183 ITDVQPGAVYTPM 195

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM- 206
           +Y   K A+  L +  A E A  +IR+N+VAP     P   P  + E++  +V    P+ 
Sbjct: 181 VYTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAXPQETQEEYRRKV----PLG 236
Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           +      +++  +AFL    A YITG T+ VDGG  +
Sbjct: 237 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 16/198 (8%)
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  +E   L  +  S F G L+ +++N G        +E   E    + + N    + 
Sbjct: 79  DISKPSEVVALFDKAVSHFGG-LDFVMSNSGMEVWCD-ELEVTQELFDKVFNLNTRGQFF 136
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
           ++Q    L      G IIL SS+  V++      +YA +K A+    +  A +     + 
Sbjct: 137 VAQ--QGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194
Query: 174 INSVAPWFITT-----------PLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
           +N +AP  + T           P     +  EK  E +    P++R G P ++   V+ L
Sbjct: 195 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 254
Query: 223 CMPAASYITGQTICVDGG 240
           C   + +I GQ I + GG
Sbjct: 255 CQEESEWINGQVIKLTGG 272

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 30/253 (11%)
Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+G   L+TG ++G+G                      A ++E +   +           
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D ++    ++L+ +  + F G +++LINN G     KP  E        +M  N  S   
Sbjct: 65  DLATSEACQQLVDEFVAKFGG-IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVM 123
Query: 115 LSQLAHPLL----KASGAGNIILV--SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
            ++ A P L    KASG  + ++   S            +Y A K  ++ + KN      
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHT 183
Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS-SLVAFLCMPAA 227
           +D +R N V+P  + T        D +  + +    PM R G  +E++ + + F    A+
Sbjct: 184 KDGVRFNIVSPGTVDTAFHADKTQDVR--DRISNGIPMGRFGTAEEMAPAFLFFASHLAS 241
Query: 228 SYITGQTICVDGG 240
            YITGQ + ++GG
Sbjct: 242 GYITGQVLDINGG 254

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM- 206
           +Y   K A+  L +  A E A  +IR+N+VAP     P   P  + E++  +V    P+ 
Sbjct: 181 VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV----PLG 236
Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           +      +++  +AFL    A YITG T+ VDGG  +
Sbjct: 237 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 35/255 (13%)
Query: 14  SLQGMTALVTGGTKGLG------------NEAELNECLREWKTKCFKVTGSVCDASSRAE 61
           S++G+ A++TGG  GLG                L+    E +T+  K+ G+   A +   
Sbjct: 6   SVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVT 65
Query: 62  REKLMKQVSSLFN---GKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESAY 113
            EK ++   +L     G++++ +N  G       Y  K    +  ED   +++ N    +
Sbjct: 66  SEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTF 125
Query: 114 HLSQLAHPLL-----KASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEW 167
           ++ +L   ++        G   +I+ ++        +G   Y+A+KG +  +   +A + 
Sbjct: 126 NVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 185
Query: 168 ARDNIRINSVAPWFITTPL--TEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCM 224
           A   IR+ ++AP    TPL  T P    +K    +  + P   R G+P E + LV  +  
Sbjct: 186 APIGIRVVTIAPGLFATPLLTTLP----DKVRNFLASQVPFPSRLGDPAEYAHLVQMVI- 240
Query: 225 PAASYITGQTICVDG 239
               ++ G+ I +DG
Sbjct: 241 -ENPFLNGEVIRLDG 254

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 35/255 (13%)
Query: 14  SLQGMTALVTGGTKGLG------------NEAELNECLREWKTKCFKVTGSVCDASSRAE 61
           S++G+ A++TGG  GLG                L+    E +T+  K+ G+   A +   
Sbjct: 7   SVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVT 66
Query: 62  REKLMKQVSSLFN---GKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESAY 113
            EK ++   +L     G++++ +N  G       Y  K    +  ED   +++ N    +
Sbjct: 67  SEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTF 126
Query: 114 HLSQLAHPLL------KASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           ++ +L   ++      +    G II  +SV           Y+A+KG +  +   +A + 
Sbjct: 127 NVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 186
Query: 168 ARDNIRINSVAPWFITTPL--TEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCM 224
           A   IR+ ++AP    TPL  T P    +K    +  + P   R G+P E + LV  +  
Sbjct: 187 APIGIRVVTIAPGLFATPLLTTLP----DKVRNFLASQVPFPSRLGDPAEYAHLVQMVI- 241
Query: 225 PAASYITGQTICVDG 239
               ++ G+ I +DG
Sbjct: 242 -ENPFLNGEVIRLDG 255

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 28  GLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN 87
           G+G+   +   + E      +V     D +  +  +  +  V + F G+++ L+NN G  
Sbjct: 60  GIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIA 118
Query: 88  YTTKPT-VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG---NIILVSSVCGVLST 143
              +   ++   E+   ++  N       +Q       AS A    +II ++SV  V ++
Sbjct: 119 SIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTS 178
Query: 144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR 203
                Y  +K  +   ++ LA   A   I +  V P  I +  T         L E    
Sbjct: 179 PERLDYCXSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGL- 237
Query: 204 TPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN 244
            P  R GEP+++ ++VA L      + TG  I  DGG ++ 
Sbjct: 238 VPXRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG 278

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 18  MTALVTGGTKGLGNEAELNECL-REWKTKCFKV--TG-------------------SVCD 55
           M  LVTG T G G      EC+ R +  +  KV  TG                   +  D
Sbjct: 1   MIVLVTGATAGFG------ECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD 54
Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
             +RA  E+++  + + +   ++IL+NN G     +P  +   ED   ++ TN +   ++
Sbjct: 55  VRNRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYM 113
Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++   P +     G+II + S  G      G +Y ATK  + Q + NL  +     +R+ 
Sbjct: 114 TRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173
Query: 176 SVAPWFI 182
            + P  +
Sbjct: 174 DIEPGLV 180

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 40/257 (15%)
Query: 15  LQGMTALVTGGTKGLGN-----------------EAELNECLREWKTKCFKVTGSVCDAS 57
           L+G  AL+T GTKG G                   A       E   +    T   C   
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIV 68
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF-LMSTNFESAYHLS 116
           + A R++L         G ++++++ +G +         +++D  +  +S N  +A  L 
Sbjct: 69  AEATRQRL---------GGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLD 119
Query: 117 QLAHPLLKASGAGNIILVSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +   P   A G+G ++ V+S+  VL      T YAA K A++  +K  + E +   +R+ 
Sbjct: 120 RQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPKGVRVV 179
Query: 176 SVAPWFITTP--------LTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
            V+P +I T         L +   +D    +K + +     P+ RP +P+EV++L+AFL 
Sbjct: 180 RVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEEVANLIAFLA 239
Query: 224 MPAASYITGQTICVDGG 240
              A+ ITG    +DGG
Sbjct: 240 SDRAASITGAEYTIDGG 256

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 36  NECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE 95
           N+   E + +  KV     D S+  E  KL       F GK++I IN VG     KP VE
Sbjct: 52  NKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVG-KVLKKPIVE 109
Query: 96  YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA 155
               +   + + N + AY   + A   +  +G  +II +++      T   + YA  K  
Sbjct: 110 TSEAEFDAMDTINNKVAYFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAP 167
Query: 156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEV---KCRTPMERPGEP 212
           +    +  + E  +  I +N++AP     P+   +   ++  E     K +    +  + 
Sbjct: 168 VEHYTRAASKELMKQQISVNAIAPG----PMDTSFFYGQETKESTAFHKSQAMGNQLTKI 223
Query: 213 KEVSSLVAFLCMPAASYITGQTICVDGGFT 242
           ++++ ++ FL      +I GQTI  +GG+T
Sbjct: 224 EDIAPIIKFLTTDGW-WINGQTIFANGGYT 252

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 92  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 143
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  L   Y+A+K A++    ++  E+ 
Sbjct: 144 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 202
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 203 VSRVNVSI 210

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 92  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 143
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  L   Y+A+K A++    ++  E+ 
Sbjct: 144 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 202
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 203 VSRVNVSI 210

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 97/254 (38%), Gaps = 26/254 (10%)
Query: 15  LQGMTALVTGGT-------------KGLGNEAELN---ECLREWKTKCFKVTGSV----C 54
           L G  ALV G T             K  G E  L+   E LR    K  +  G       
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           D +   E + L   V   F G L+ L++ +           Y+    +D    +  +  S
Sbjct: 66  DVTQDEELDALFAGVKEAFGG-LDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAYS 124
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              +++ A PLL+  G   I+ ++            + A  K A+    + LA E     
Sbjct: 125 LVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGPKG 182
Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +R+N+++   + T          K  + V    P+ R    +EV +L  FL  P AS IT
Sbjct: 183 VRVNAISAGPVRTVAARSIPGFTKXYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGIT 242
Query: 232 GQTICVDGGFTVNG 245
           G+ + VD G+ + G
Sbjct: 243 GEVVYVDAGYHIXG 256

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIIL 133
           G+L+I++ N G     +   +        ++  N    +H  +   P + + G  G+I+L
Sbjct: 103 GRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVL 162
Query: 134 VSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS 192
            SSV G  +  N G   AA  G +  L +  A E     IR+N+V P  ++T +    ++
Sbjct: 163 TSSVGGRKAYPNTGHYIAAKHGVIG-LMRAFAVELGPHMIRVNAVLPTQVSTTMV---MN 218
Query: 193 DEKFLEEVKCRTPMERPG-------------------EPKEVSSLVAFLCMPAASYITGQ 233
           D+ F      R  +E PG                   +  ++S+ V FL    + Y+TG 
Sbjct: 219 DQTFR---LFRPDLENPGPDDFAPISQMMHTLPVPWVDASDISNAVLFLASDESRYVTGV 275
Query: 234 TICVDGG 240
           ++ VD G
Sbjct: 276 SLPVDAG 282

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 72  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 123
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  L   Y+A+K A++    ++  E+ 
Sbjct: 124 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYS 182
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 183 VSRVNVSI 190

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 30/257 (11%)
Query: 15  LQGMTALVTGGT-------------KGLGNEAELN---ECLREWKTKCFKVTGSV----C 54
           L G  ALV G T             K  G E  L+   E LR    K  +  G       
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE--YM---AEDLSFLMSTNF 109
           D +   E + L   V   F G L+ L++ +   +  +  +E  Y+    +D    +  + 
Sbjct: 66  DVTQDEELDALFAGVKEAFGG-LDYLVHAIA--FAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S   +++ A PLL+  G   I+ ++            + A  K A+    + LA E   
Sbjct: 123 YSLVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180
Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             +R+N+++   + T          K  + V    P+ R    +EV +L  FL  P AS 
Sbjct: 181 KGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG 240
Query: 230 ITGQTICVDGGFTVNGF 246
           ITG+ + VD G+ + G 
Sbjct: 241 ITGEVVYVDAGYHIMGM 257

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 35/255 (13%)
Query: 14  SLQGMTALVTGGTKGLG------------NEAELNECLREWKTKCFKVTGSVCDASSRAE 61
           S++G+ A++TGG  GLG                L+    E +T+  K+ G+   A +   
Sbjct: 7   SVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVT 66
Query: 62  REKLMKQVSSLFN---GKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESAY 113
            EK ++   +L     G++++ +N  G       Y  K    +  ED   +++ N    +
Sbjct: 67  SEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTF 126
Query: 114 HLSQLAHPLL-----KASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEW 167
           ++ +L   ++        G   +I+ ++        +G   Y+A+KG +  +   +A + 
Sbjct: 127 NVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 186
Query: 168 ARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCM 224
           A   IR+ ++AP    TPL    L D    FL     + P   R G+P E + LV  +  
Sbjct: 187 APIGIRVVTIAPGLFATPLLT-TLPDTVRNFL---ASQVPFPSRLGDPAEYAHLVQMVI- 241
Query: 225 PAASYITGQTICVDG 239
               ++ G+ I +DG
Sbjct: 242 -ENPFLNGEVIRLDG 255

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 86  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 137
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 138 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 197 VSRVNVSI 204

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 75  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 126
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 127 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 185
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 186 VSRVNVSI 193

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 82  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 133
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 134 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 192
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 193 VSRVNVSI 200

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 73  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 124
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 125 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 183
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 184 VSRVNVSI 191

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 72  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 123
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 124 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 182
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 183 VSRVNVSI 190

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 67  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 118
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 119 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 177
Query: 168 -ARDNIRI 174
            +R N+ I
Sbjct: 178 VSRVNVSI 185

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 37/198 (18%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 89  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 140
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 141 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 199
Query: 168 -ARDNIRINSVAPWFITT 184
            +R N+ I       I T
Sbjct: 200 VSRVNVSITLCVLGLIDT 217

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 75  GKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH--PLLKASGAGNI 131
           G ++IL++++G     +KP +E   +   +L + +  S   +S L+H  P++   GA +I
Sbjct: 117 GSIDILVHSLGNGPEVSKPLLETSRK--GYLAAISASSYSFVSLLSHFLPIMNPGGA-SI 173
Query: 132 ILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPY 190
            L       +    G   ++ K A+    + LA E  R  NIR+N+++   + +   +  
Sbjct: 174 SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI 233
Query: 191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
              +  +E      P+++     EV +  AFL  P AS ITG TI VD G    G
Sbjct: 234 GFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 288

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 37/198 (18%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  + C +        + G
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL---MSTN 108
           ++ D +     E+ + Q   L  G L++LI     N+ T  ++    +D+  +   M  N
Sbjct: 86  TMEDMTFA---EQFVAQAGKLMGG-LDMLI----LNHITNTSLNLFHDDIHHVRKSMEVN 137
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW- 167
           F S   L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E+ 
Sbjct: 138 FLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196
Query: 168 -ARDNIRINSVAPWFITT 184
            +R N+ I       I T
Sbjct: 197 VSRVNVSITLCVLGLIDT 214

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 43  KTKCFKVTGSVCD-ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL 101
           KT+   +T  V D A+  A  + L ++ ++L       LINN G    T P      +D 
Sbjct: 68  KTRVLPLTLDVRDRAAXSAAVDNLPEEFATLRG-----LINNAGLALGTDPAQSCDLDDW 122
Query: 102 SFLMSTNFESAYHLSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
              + TN +   + ++L  P L A GAG +I+ + SV G        +Y  TK  + Q +
Sbjct: 123 DTXVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFS 182
Query: 161 KNLACEWARDNIRINSVAP 179
            NL C+     +R+ ++ P
Sbjct: 183 LNLRCDLQGTGVRVTNLEP 201

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 129 GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE 188
           G ++L +S+ G       T YAA K  +  L    A + +   IR+N++AP  + TP+ E
Sbjct: 167 GALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME 226
Query: 189 PYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQTICVDG 239
                E+ L +     P  +R G P E +   AFL      YI G+ + +DG
Sbjct: 227 SV--GEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDG 274

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 24/195 (12%)
Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
              G  A+VTGG  G+G                   ++  L + +   + + F   G VC
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D     E  +L  +   L  G ++++ +N G      P  +   +D  +++  +   + H
Sbjct: 88  DVRHLDEMVRLADEAFRLLGG-VDVVFSNAGI-VVAGPLAQMNHDDWRWVIDIDLWGSIH 145
Query: 115 LSQLAHP-LLKASGAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             +   P LL+    G+I   +S  G++ +  LGT Y   K  +  LA+ LA E   + I
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGT-YGVAKYGVVGLAETLAREVKPNGI 204
Query: 173 RINSVAPWFITTPLT 187
            ++ + P  + T L 
Sbjct: 205 GVSVLCPMVVETKLV 219

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  A+   L+ +    + G+++++INN     + KP      E +   +      A  
Sbjct: 68  DITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           L Q   P L+ S  G ++ V+S+    S      Y   K A+  +++ LA E     IR+
Sbjct: 127 LIQGFTPALEES-KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185
Query: 175 NSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           NSV P +I     + Y          S E         + ++R     EV+S + F+   
Sbjct: 186 NSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245
Query: 226 AASYITGQTICVDGG 240
            AS ITGQ + V+ G
Sbjct: 246 LASGITGQALDVNCG 260

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++   +C +        + G
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           S+ D +     E+ + +  +L  G   +++N+V  N  T    E   +++   M  NF S
Sbjct: 67  SMEDMTFA---EEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEI--DNVRKSMEVNFHS 121
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              LS  A P+L  S  G+I +VSSV G ++  L   Y+A+K A++     L  E+  + 
Sbjct: 122 FVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNK 180
Query: 172 IRIN 175
           + ++
Sbjct: 181 VNVS 184

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++   +C +        + G
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           S+ D +     E+ + +  +L  G   +++N+V  N  T    E   +++   M  NF S
Sbjct: 90  SMEDMTFA---EEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGE--IDNVRKSMEVNFHS 144
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              LS  A P+L  S  G+I +VSSV G ++  L   Y+A+K A++     L  E+  + 
Sbjct: 145 FVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNK 203
Query: 172 IRIN 175
           + ++
Sbjct: 204 VNVS 207

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++   +C +        + G
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           S+ D +     E+ + +  +L  G   +++N+V  N  T    E   +++   M  NF S
Sbjct: 69  SMEDMTFA---EEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGE--IDNVRKSMEVNFHS 123
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              LS  A P+L  S  G+I +VSSV G ++  L   Y+A+K A++     L  E+  + 
Sbjct: 124 FVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNK 182
Query: 172 IRIN 175
           + ++
Sbjct: 183 VNVS 186

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++   +C +        + G
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           S+ D +     E+ + +  +L  G   +++N+V  N  T    E   +++   M  NF S
Sbjct: 69  SMEDMTFA---EEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGE--IDNVRKSMEVNFHS 123
Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              LS  A P+L  S  G+I +VSSV G ++  L   Y+A+K A++     L  E+  + 
Sbjct: 124 FVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNK 182
Query: 172 IRIN 175
           + ++
Sbjct: 183 VNVS 186

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 24  GGTKGLG-NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILIN 82
           G  KG+G   +  ++ + E + +  K   +V +  S    EKL+K     F G++++++N
Sbjct: 43  GDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVKTALDTF-GRIDVVVN 98
Query: 83  NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS 142
           N G     +       ED   +   +   ++ +++ A    K    G II  +S  G+  
Sbjct: 99  NAGI-LRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYG 157
Query: 143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC 202
                 Y+A K  +  LA  L  E  ++NI  N++AP    +  TE  +  E  +E +K 
Sbjct: 158 NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP-NAGSRXTET-VXPEDLVEALK- 214
Query: 203 RTPMERPGEPKEVSSLVAFLC 223
                    P+ V+ LV +LC
Sbjct: 215 ---------PEYVAPLVLWLC 226

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 15  LQGMTALVTGGTKGLGN--------------------------EAELNECLREWKTKCFK 48
           + G  ALVTG  +G+G                           +A L+E     KT   +
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
                CD + + +     ++V   F G+L+IL+NN G N   K   + +  +L  ++S  
Sbjct: 65  -----CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGVN-NEKNWEKTLQINLVSVISGT 117
Query: 109 FESAYHLSQLAHPLLKASGAGNIIL-VSSVCGVLSTNLGTIYAATKGAMNQLAKN--LAC 165
           +    ++S+      +  G G II+ +SS+ G++      +Y A+K  +    ++  LA 
Sbjct: 118 YLGLDYMSK------QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAA 171
Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME 207
                 +R+N++ P F+ T + E    +E   + ++ +  ++
Sbjct: 172 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK 213

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 26/194 (13%)
Query: 14  SLQGMTALVTGGTKGLGN---------------EAELNECLR----EWKTKCFKVTGSVC 54
           +LQG  AL+TG + G+G                 A   E LR    E      KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 55  DASSRAEREKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           D    A+R+ +   V+S     G L+IL+NN G      P  +    D + ++ TN    
Sbjct: 64  DV---ADRQGVDAAVASTVEALGGLDILVNNAGI-MLLGPVEDADTTDWTRMIDTNLLGL 119
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            ++++ A P L  S  G ++ +SS+ G ++     +Y ATK  +N  ++ L  E     +
Sbjct: 120 MYMTRAALPHLLRS-KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 173 RINSVAPWFITTPL 186
           R+  + P    T L
Sbjct: 179 RVVVIEPGTTDTEL 192

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 75  GKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH--PLLKASGAGNI 131
           G ++IL++++      +KP +E   +   +L + +  S   +S L+H  P++   GA +I
Sbjct: 128 GSIDILVHSLANGPEVSKPLLETSRK--GYLAAISASSYSFVSLLSHFLPIMNPGGA-SI 184
Query: 132 ILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPY 190
            L       +    G   ++ K A+    + LA E  R  NIR+N+++   + +   +  
Sbjct: 185 SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI 244
Query: 191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
              +  +E      P+++     EV +  AFL  P AS ITG TI VD G    G
Sbjct: 245 GFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 299

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 39/264 (14%)
Query: 13  WSLQGMTALVTGGTKGLG---------NEAELNECLRE------------WKTKCFKVTG 51
           + L    A+VTGG+ G+G           A +  C R+             +    ++  
Sbjct: 4   YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFA 63
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTN 108
           SVCD    A + +   +      G  +IL+NN G    +   + T E  +E+L       
Sbjct: 64  SVCDVLD-ALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL----K 118
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           F S  H  +   P L++     I+ V+S+            +A +  +  L +++A E+A
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178
Query: 169 RDNIRINSV-------APWFITTPLTEPYLSDEKFLEEVKCR---TPMERPGEPKEVSSL 218
              +R+N +         W       E    D         R    P+ R G+P E +  
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238
Query: 219 VAFLCMPAASYITGQTICVDGGFT 242
           + FL  P ++Y TG  I V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 75  GKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH--PLLKASGAGNI 131
           G ++IL++++      +KP +E   +   +L + +  S   +S L+H  P++   GA +I
Sbjct: 118 GSIDILVHSLANGPEVSKPLLETSRK--GYLAAISASSYSFVSLLSHFLPIMNPGGA-SI 174
Query: 132 ILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPY 190
            L       +    G   ++ K A+    + LA E  R  NIR+N+++   + +   +  
Sbjct: 175 SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI 234
Query: 191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
              +  +E      P+++     EV +  AFL  P AS ITG TI VD G    G
Sbjct: 235 GFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G+L+ L+NN G     KP  E   E+   ++ TN   A+   + A P L   G G I+ V
Sbjct: 77  GELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNV 135
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
            S+ G      G  Y A+K  +  LA     +    N+R+ +V P  + T
Sbjct: 136 GSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDT 185

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 75  GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV 134
           G++++L+NN G         E    +L  L   +      L++   P  +  G+G+++ +
Sbjct: 78  GRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLPQXRERGSGSVVNI 136
Query: 135 SSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL---TEPYL 191
           SS  G LS    + Y+ATK A+ QL++ LA E A   I++  V P    T L      Y 
Sbjct: 137 SSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYF 196
Query: 192 SDEK--FLEEVKCRTPM------ERPGEP 212
           S+E   + E+V     +       +PG+P
Sbjct: 197 SEENPAYAEKVGPTRQLVQGSDGSQPGDP 225

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 9/201 (4%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP-----TVEYMAEDLSFLMSTN 108
           CD S   + + L K +   + G L+I+++++   Y  K       ++   E     M  +
Sbjct: 78  CDVSLDEDIKNLKKFLEENW-GSLDIIVHSIA--YAPKEEFKGGVIDTSREGFKIAMDIS 134
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
             S   L++   PL++    G I+ +S            +    K A+    + LA + A
Sbjct: 135 VYSLIALTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIA 193
Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
           +   RIN+++   + T            +E      P  +P   ++V     FLC   A 
Sbjct: 194 KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWAR 253
Query: 229 YITGQTICVDGGFTVNGFFFR 249
            ITG+ + VD G+ + G F R
Sbjct: 254 AITGEVVHVDNGYHIMGVFGR 274

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 35/255 (13%)
Query: 14  SLQGMTALVTGGTKGLG-----------NEAELNECLREWKTKCFKVTGSVC-----DAS 57
           S++G+ A++TGG  GLG             A L +          K  G+ C     D +
Sbjct: 7   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 66
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESA 112
           S  + +  +      F G++++ +N  G       Y  K    +  ED   ++  N    
Sbjct: 67  SEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 125
Query: 113 YHLSQLAHPLL------KASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
           +++ +L    +      +    G II  +SV           Y+A+KG +  +   +A +
Sbjct: 126 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 185
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLV-AFLCM 224
            A   IR+ ++AP    TPL       EK    +  + P   R G+P E + LV A +  
Sbjct: 186 LAPIGIRVMTIAPGLFGTPLLTSL--PEKVRNFLASQVPFPSRLGDPAEYAHLVQAIIEN 243
Query: 225 PAASYITGQTICVDG 239
           P   ++ G+ I +DG
Sbjct: 244 P---FLNGEVIRLDG 255

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 14  SLQGMTALVTGGTKGLG-----------NEAELNECLREWKTKCFKVTGSVC-----DAS 57
           S++G+ A++TGG  GLG             A L +          K  G+ C     D +
Sbjct: 7   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 66
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESA 112
           S  + +  +      F G++++ +N  G       Y  K    +  ED   ++  N    
Sbjct: 67  SEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 125
Query: 113 YHLSQLAHPLL-----KASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACE 166
           +++ +L    +        G   +I+ ++        +G   Y+A+KG +  +   +A +
Sbjct: 126 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 185
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLV-AFLCM 224
            A   IR+ ++AP    TPL       EK    +  + P   R G+P E + LV A +  
Sbjct: 186 LAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 243
Query: 225 PAASYITGQTICVDG 239
           P   ++ G+ I +DG
Sbjct: 244 P---FLNGEVIRLDG 255

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 14  SLQGMTALVTGGTKGLG-----------NEAELNECLREWKTKCFKVTGSVC-----DAS 57
           S++G+ A++TGG  GLG             A L +          K  G+ C     D +
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 68
Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGT-----NYTTKPTVEYMAEDLSFLMSTNFESA 112
           S  + +  +      F G++++ +N  G       Y  K    +  ED   ++  N    
Sbjct: 69  SEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 127
Query: 113 YHLSQLAHPLL-----KASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACE 166
           +++ +L    +        G   +I+ ++        +G   Y+A+KG +  +   +A +
Sbjct: 128 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 187
Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLV-AFLCM 224
            A   IR+ ++AP    TPL       EK    +  + P   R G+P E + LV A +  
Sbjct: 188 LAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 245
Query: 225 PAASYITGQTICVDG 239
           P   ++ G+ I +DG
Sbjct: 246 P---FLNGEVIRLDG 257

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 21  LVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM--KQVSSLFN--GK 76
           +V GGT G+G  AEL + L    T        +   +SR     +   K V   F   G 
Sbjct: 10  VVLGGTSGIG--AELAKQLESEHT--------IVHVASRQTGLDISDEKSVYHYFETIGA 59
Query: 77  LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSS 136
            + LI   G+       V+       +   T F  A   ++     LK    G+I L S 
Sbjct: 60  FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTS- 116
Query: 137 VCGVLSTNLGT---IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD 193
             G+LS  +     + AA   A+    K LA E A   IR+N+++P    T   +   +D
Sbjct: 117 --GMLSRKVVANTYVKAAINAAIEATTKVLAKELA--PIRVNAISPGLTKTEAYKGMNAD 172
Query: 194 EK--FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
           ++    +  +   P+ + GE  +++  +A+L     SY+TG  I VDGG
Sbjct: 173 DRDAMYQRTQSHLPVGKVGEASDIA--MAYLFAIQNSYMTGTVIDVDGG 219

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 7   HDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF 47
           H  + R S+ G   L+TG   G+G                   N+  L E   + K    
Sbjct: 21  HMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA 80
Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           KV   V D S+R +     K+V +   G ++IL+NN G  YT+         DL      
Sbjct: 81  KVHTFVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTS---------DLFATQDP 130
Query: 108 NFESAYHLSQLAH--------PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL 159
             E  + ++ LAH        P +  +  G+I+ V+S  G +S      Y ++K A    
Sbjct: 131 QIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGF 190
Query: 160 AKNLACEWAR---DNIRINSVAPWFITT 184
            K L  E A      ++   + P F+ T
Sbjct: 191 HKTLTDELAALQITGVKTTCLCPNFVNT 218

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 247
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 247
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 247
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 227
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 247
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 227
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
           ++Y   K A+  L ++ A E A   IR+N VAP     P+       +K+  +V    P+
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV----PL 227
Query: 207 -ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             R    ++++  V FL   +A YITG  I VDGG ++
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 26/194 (13%)
Query: 14  SLQGMTALVTGGTKGLGN---------------EAELNECLR----EWKTKCFKVTGSVC 54
           +LQG  AL+TG + G+G                 A   E LR    E      KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 55  DASSRAEREKLMKQVSSLFN--GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           D    A+R+ +   V+S     G L+IL+NN G      P  +    D +  + TN    
Sbjct: 64  DV---ADRQGVDAAVASTVEALGGLDILVNNAGIXLL-GPVEDADTTDWTRXIDTNLLGL 119
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            + ++ A P L  S  G ++  SS+ G ++     +Y ATK  +N  ++ L  E     +
Sbjct: 120 XYXTRAALPHLLRS-KGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 173 RINSVAPWFITTPL 186
           R+  + P    T L
Sbjct: 179 RVVVIEPGTTDTEL 192

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  ++C +        + G
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---LMSTN 108
           ++ D +     E+ + +   L  G L++LI     N+ T+ ++    +D+     +M  N
Sbjct: 76  TMEDMTF---AEQFIVKAGKLMGG-LDMLI----LNHITQTSLSLFHDDIHSVRRVMEVN 127
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           F S   +S  A P+LK S  G+I ++SS+ G ++  +   Y+A+K A++     +  E 
Sbjct: 128 FLSYVVMSTAALPMLKQSN-GSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL 185

>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD +  A+ + L   + + ++  L+ L++++G      P      + L  L   NF  A+
Sbjct: 71  CDVADDAQIDALFASLKTHWD-SLDGLVHSIGF----APREAIAGDFLDGLTRENFRIAH 125
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTN-LGTIYAA--------TKGAMNQLAKNLA 164
            +S  + P L  +    + ++S    +L+ + LG   A          K A+    + LA
Sbjct: 126 DISAYSFPALAKAA---LPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLA 182
Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
                  +R+N+++   I T       S  K L+ V+  +P++R    ++V +  AFL  
Sbjct: 183 VSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLS 242
Query: 225 PAASYITGQTICVDGGF 241
             AS +T + + VD GF
Sbjct: 243 DLASGVTAEVMHVDSGF 259

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 15  LQGMTALVTGGTKGLGNE---------------AELNECLREWKTKCFK--------VTG 51
           LQG   +VTG +KG+G E               A   E L++  ++C +        + G
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---LMSTN 108
           ++ D +     E+ + +   L  G L++LI     N+ T+ ++    +D+     +M  N
Sbjct: 67  TMEDMTF---AEQFIVKAGKLMGG-LDMLI----LNHITQTSLSLFHDDIHSVRRVMEVN 118
Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           F S   +S  A P+LK S  G+I ++SS+ G ++  +   Y+A+K A++     +  E  
Sbjct: 119 FLSYVVMSTAALPMLKQSN-GSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTELY 177
Query: 169 RDNIRIN 175
              + ++
Sbjct: 178 ITKVNVS 184

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEP 212
           K ++    +  A     D I++N+V+   I T       + +K L+     +P+++  + 
Sbjct: 163 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDI 222
Query: 213 KEVSSLVAFLCMPAASYITGQTICVDGGF 241
            EV + VAFLC   A+ ITG+ + VD G+
Sbjct: 223 MEVGNTVAFLCSDMATGITGEVVHVDAGY 251

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    +  A     D I++N+V+   I T       + +K L+     +P+++  +
Sbjct: 182 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVD 241
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGF 241
             EV + VAFLC   A+ ITG+ + VD G+
Sbjct: 242 IMEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 52  SVCDASSRAEREK---LMKQVSSLFNGKLNILINNVGT---NYTTKPTVEYMAEDLSFLM 105
           +V D S+ A+ ++   L++     F G L++L+NN G          + E     ++  +
Sbjct: 88  AVADGSNVADWDQAAGLIQTAVETFGG-LDVLVNNAGIVRDRMIANTSEEEFDAVIAVHL 146
Query: 106 STNFESAYHLSQLAHPLLKASGA--GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNL 163
             +F +  H +     L KA  A  G II  SS  G+  +     Y+A K  +  L    
Sbjct: 147 KGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVG 206
Query: 164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           A E  R  + +N++AP    T +TE       F E +  +        P+ VS LV +L 
Sbjct: 207 AAEMGRYGVTVNAIAP-SARTRMTETV-----FAEMMATQDQDFDAMAPENVSPLVVWLG 260
Query: 224 MPAASYITGQTICVDGG 240
              A  +TG+   V+GG
Sbjct: 261 SAEARDVTGKVFEVEGG 277

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           LS+   P L+A+ +G +I ++S  G       TIYAA+K A+  LA     E A + IR+
Sbjct: 113 LSRQLLPALRAA-SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRV 171
Query: 175 NSVAPWFITTPLTEPYLSDE--KFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           ++V+P    TP+ +  +  +   F  E+          EPKE+++ + F+ 
Sbjct: 172 STVSPGPTNTPMLQGLMDSQGTNFRPEIYI--------EPKEIANAIRFVI 214

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    + +A     + +R+N+++   I T          K L   +  TP+ R   
Sbjct: 165 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 224
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 225 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 256

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    + +A     + +R+N+++   I T          K L   +  TP+ R   
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    + +A     + +R+N+++   I T          K L   +  TP+ R   
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    + +A     + +R+N+++   I T          K L   +  TP+ R   
Sbjct: 161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 220
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 221 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 252

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    + +A     + +R+N+++   I T          K L   +  TP+ R   
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE 211
            K ++    + +A     + +R+N+++   I T          K L   +  TP+ R   
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            ++V +  AFLC   ++ I+G+ + VDGGF++
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 6/195 (3%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD S  A  + +   +   + GKL+ L++ +G +   + +  Y+    S    T   S Y
Sbjct: 71  CDVSDSASIDAVFNTIEKKW-GKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGV--LSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            L+ L     K    G  IL  +  G   +  N   +    K A+    K LA +    +
Sbjct: 130 SLTALTKRAEKLXSDGGSILTLTYYGAEKVVPNY-NVXGVAKAALEASVKYLAVDLGPKH 188
Query: 172 IRINSVAPWFITTPLTEPYLSDEKF-LEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           IR+N+++   I T L    + D ++ L+  +   P+ R    +EV     +L    +  +
Sbjct: 189 IRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRSV 247
Query: 231 TGQTICVDGGFTVNG 245
           TG+   VD G+ + G
Sbjct: 248 TGEVHHVDSGYNIIG 262

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 17/209 (8%)
Query: 32  EAELNECLREWKT----KCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN 87
           EA L E   + K+    +   +  ++ +A+++  RE L  +V   F G+L+ L++N    
Sbjct: 48  EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRE-LAARVEHEF-GRLDGLLHNASII 105
Query: 88  YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT 147
               P  +   ED   +   N  + + L++   PLLK S   +I   SS  G        
Sbjct: 106 GPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWG 165
Query: 148 IYAATKGAMNQLAKNLACEW-ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
            Y  +K A   L + LA E      +R NS+ P    T        DE          P+
Sbjct: 166 AYGVSKFATEGLXQTLADELEGVTAVRANSINPGATRTGXRAQAYPDEN---------PL 216
Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTI 235
             P  P+++  +  +L  P ++ I GQ +
Sbjct: 217 NNPA-PEDIXPVYLYLXGPDSTGINGQAL 244

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 6/196 (3%)
Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD +  A  + + + +   + GKL+ L++ +G +   + T  Y+    +   +T   S Y
Sbjct: 88  CDVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVY 146
Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGV--LSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            L+ ++    K    G  IL  +  G   +  N   +    K A+    K LA +    N
Sbjct: 147 SLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY-NVMGVAKAALEASVKYLAVDLGPQN 205
Query: 172 IRINSVAPWFITTPLTEPYLSDEKF-LEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           IR+N+++   I T L    + D ++ L+  +   P+ R     EV  +  +     +  +
Sbjct: 206 IRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSV 264
Query: 231 TGQTICVDGGFTVNGF 246
           TG+    D G+ V G 
Sbjct: 265 TGEVHHADSGYHVIGM 280

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 15  LQGMTALVTGGTKGLGNEAELNEC--------LREWKTKCFKVTGSVCDAS--------- 57
           LQ    LVTG + G+G EA L           L   + K  +V   + D           
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 58  -----SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
                +  E  ++  ++++ +  +L+ +++N G      P  E   +    +M  N  + 
Sbjct: 72  DLLTCTAEECRQVADRIAAHYP-RLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNAT 130
Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           + L+Q   PLL  S AG+++  SS  G         YA +K A   + + LA E+   ++
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSL 190
Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME 207
           R+N + P    T +       E   +  K +TP +
Sbjct: 191 RVNCINPGGTRTSMRASAFPTE---DPQKLKTPAD 222

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	251
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-129
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-126
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-125
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-75
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-72
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-72
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-71
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-71
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-70
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-70
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-69
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-69
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	9e-69
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-68
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-67
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-67
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-66
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-65
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-64
1xhl_A	297	Short-chain dehydrogenase/reductase family member	5e-64
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	6e-64
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-64
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-63
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-63
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-62
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-62
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	5e-62
4e4y_A	244	Short chain dehydrogenase family protein; structur	9e-62
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-61
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-61
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-61
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-61
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	7e-61
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-61
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	9e-61
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-60
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-60
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-60
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-60
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-60
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	6e-60
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-60
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-59
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-59
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-59
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-59
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-59
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-59
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	5e-59
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	7e-59
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	7e-59
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-58
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-58
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-58
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-58
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	5e-58
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-58
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-58
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	7e-58
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	9e-58
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-57
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-57
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-56
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-56
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-56
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-56
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	8e-56
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-55
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-55
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-55
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-55
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	8e-55
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	9e-55
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-54
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-54
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-54
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-54
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-54
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-54
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	8e-54
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-53
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-53
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-53
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-53
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-53
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-53
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-53
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-52
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-52
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	8e-52
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-51
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-51
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-51
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-51
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	5e-51
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-51
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-51
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-50
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-50
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-49
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-49
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-49
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-49
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-49
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-49
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-49
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-49
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	4e-49
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-49
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-49
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	7e-49
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	8e-49
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-49
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	9e-49
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	9e-49
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-48
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-48
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-47
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-47
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-47
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-47
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-47
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-47
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	4e-47
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-47
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	6e-47
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	9e-47
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-46
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	6e-46
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	8e-46
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-45
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-45
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-45
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-45
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	9e-45
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-44
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-44
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-44
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-44
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	5e-44
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	8e-44
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-43
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-43
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-42
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-41
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-41
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-36
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-36
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-35
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	8e-35
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-34
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-34
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-31
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-31
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-31
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-30
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-30
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-29
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-29
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-28
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-28
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-27
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	7e-25
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-26
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-25
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-23
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-23
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	6e-22
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-21
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-21
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-20
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	6e-20
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-18
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-18
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	6e-18
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-17
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-17
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-17
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-16
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-15
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	8e-15
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	9e-15
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-14
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-12
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	7e-12
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-11
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-11
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-11
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-11
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-11
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-11
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-11
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-11
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	5e-11
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	1e-09
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-09
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	2e-09
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-08
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	6e-07

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  364 bits (938), Expect = e-129
 Identities = 168/267 (62%), Positives = 200/267 (74%), Gaps = 24/267 (8%)

Query: 1   MAQAYDHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLRE 41
           MA A   ++  RWSL+  T LVTGGTKG+G                   NE ELNECL +
Sbjct: 1   MAGA---EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57

Query: 42  WKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL 101
           W+ K F+VTGSVCDAS R EREKLM+ VSS+F GKL+ILINN+G   + KPT++Y AED 
Sbjct: 58  WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDF 116

Query: 102 SFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
           SF +STN ESAYHLSQLAHPLLKASG GNII +SS+ GV+S ++G+IY+ATKGA+NQLA+
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLAR 176

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           NLACEWA D IR N+VAP  I TPL E  + D++F + V  R P+ R GEP+EVSSLVAF
Sbjct: 177 NLACEWASDGIRANAVAPAVIATPLAEA-VYDDEFKKVVISRKPLGRFGEPEEVSSLVAF 235

Query: 222 LCMPAASYITGQTICVDGGFTVNGFFF 248
           LCMPAASYITGQTICVDGG TVNGF +
Sbjct: 236 LCMPAASYITGQTICVDGGLTVNGFSY 262

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  358 bits (921), Expect = e-126
 Identities = 134/263 (50%), Positives = 178/263 (67%), Gaps = 24/263 (9%)

Query: 8   DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK 48
           + + RWSL+G TALVTGG+KG+G                   NE EL+ECL  W+ K   
Sbjct: 12  NNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
           V GSVCD  SR ER+KLM+ V+ +F+GKLNIL+NN G     K   ++  +D + +M TN
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH-KEAKDFTEKDYNIIMGTN 130

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
           FE+AYHLSQ+A+PLLKAS  GN+I +SS+ G  +    ++Y+A+KGA+NQ+ K+LACEWA
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190

Query: 169 RDNIRINSVAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           +DNIR+NSVAP  I TPL E  +      ++ ++    +TPM R G+P+EVS+L+AFLC 
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF 250

Query: 225 PAASYITGQTICVDGGFTVNGFF 247
           PAASYITGQ I  DGGFT NG F
Sbjct: 251 PAASYITGQIIWADGGFTANGGF 273

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  355 bits (913), Expect = e-125
 Identities = 130/259 (50%), Positives = 169/259 (65%), Gaps = 23/259 (8%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
            RW+L+G TALVTGG++G+G                   N+ ELN+CL +W++K FKV  
Sbjct: 3   GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA 62

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
           SVCD SSR+ER++LM  V++ F+GKLNIL+NN G     K   +Y  ED S +MS NFE+
Sbjct: 63  SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFEA 121

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           AYHLS LAHP LKAS  GN++ +SSV G L+     +Y ATKGAM+QL + LA EWA+DN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181

Query: 172 IRINSVAPWFITTPLTEPYLSDE---KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
           IR+N V P  I T L E  + D    + L ++  R  + R GEPKE++++VAFLC PAAS
Sbjct: 182 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS 241

Query: 229 YITGQTICVDGGFTVNGFF 247
           Y+TGQ I VDGG   N  F
Sbjct: 242 YVTGQIIYVDGGLMANCGF 260

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  229 bits (586), Expect = 1e-75
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 20/248 (8%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L+   ALVT  T G+G                    +  ++  +   + +   VTG+VC
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVC 70

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
                 +RE+L+    +L  G ++IL++N   N      ++   E    ++  N ++   
Sbjct: 71  HVGKAEDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           +++   P ++  G G++++VSSV           Y  +K A+  L KNLA E A  NIR+
Sbjct: 130 MTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 189

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N +AP  I T  ++    D+   E +K    + R G P++ + +V+FLC   ASYITG+T
Sbjct: 190 NCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGET 249

Query: 235 ICVDGGFT 242
           + V GG  
Sbjct: 250 VVVGGGTA 257

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  221 bits (565), Expect = 2e-72
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 22/254 (8%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           ++  L    A+VTGG + +G                   +EA   + + + + +   V+ 
Sbjct: 7   EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS 66

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
            V D ++    +  ++ V     G+++IL+   G   +     +         +  N   
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLACEWAR 169
            +   Q    ++     G I+ + S+ G++         Y A+K  ++Q  ++LA EWA 
Sbjct: 126 MFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAP 185

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR N+VAP +I T LT   +   +  +     TPM R G+P EV+S+V FL   AAS 
Sbjct: 186 HGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASL 245

Query: 230 ITGQTICVDGGFTV 243
           +TG  + VD GFTV
Sbjct: 246 MTGAIVNVDAGFTV 259

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  221 bits (565), Expect = 3e-72
 Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 23/254 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNEC---LREWKTKCFKVTG 51
           S Q  T LVTGG  G+G                   N  +L      L         +  
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D ++  E  + +  V++   G+L+ +++  G +    P  +  +E     +  N   
Sbjct: 68  EPTDITNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
             ++ + A   +   G G+ + +SS+    +      Y  TK A++ L +  A E     
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +R+NS+ P  I T L        +   +    TP+ R GE ++V+++  FL   AAS++T
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT 246

Query: 232 GQTICVDGGFTVNG 245
           GQ I VDGG  +  
Sbjct: 247 GQVINVDGGQMLRR 260

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  217 bits (555), Expect = 3e-71
 Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 30/251 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +  G+ ALVTG  KG+G                     ++L    +E    C  +     
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPGIEPVCV 59

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D       EK +  +     G +++L+NN       +P +E   E      S N  S + 
Sbjct: 60  DLGDWDATEKALGGI-----GPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQ 113

Query: 115 LSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +SQ+    +   G  G+I+ VSS+   ++      Y++TKGAM  L K +A E     IR
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +NSV P  + T + +   +D +F  ++K R P+ +  E ++V + + FL    ++  +G 
Sbjct: 174 VNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG 233

Query: 234 TICVDGGFTVN 244
            I VD G+  +
Sbjct: 234 GILVDAGYLAS 244

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  217 bits (555), Expect = 6e-71
 Identities = 83/256 (32%), Positives = 128/256 (50%), Gaps = 23/256 (8%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKV 49
           ++ + L+G  ALVTGG++GLG                   N  E +E  ++   K   + 
Sbjct: 14  KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVET 73

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               CD S+  E +KL++ V   F GKL+ ++N  G N    P  E+  ++   ++  N 
Sbjct: 74  MAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNL 131

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWA 168
              Y++ + A  LL+ S   +II + S+     T      YAA+KG +  L K LA EW 
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 191

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
           R  IR+N +AP +  T +TE   SD + L+ +  R P+ R G P+++  +  FL    A 
Sbjct: 192 RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAK 251

Query: 229 YITGQTICVDGGFTVN 244
           Y+TGQ I VDGG+T N
Sbjct: 252 YVTGQIIFVDGGWTAN 267

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  215 bits (550), Expect = 2e-70
 Identities = 77/249 (30%), Positives = 114/249 (45%), Gaps = 22/249 (8%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G TALVTG  +GLG                       L E +     K +   G   
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +     E    ++ +     ++ILINN G  Y  KP VE   E+   ++ TN  SA+ 
Sbjct: 66  DVTDELAIEAAFSKLDAEG-IHVDILINNAGIQYR-KPMVELELENWQKVIDTNLTSAFL 123

Query: 115 LSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +S+ A   + A  + G II + S+    +      Y A KG +  L  ++A EWA+ NI+
Sbjct: 124 VSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQ 183

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
            N++ P +I T +    + D++F   VK  TP +R G P+E+     FL   A+ YI GQ
Sbjct: 184 TNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQ 243

Query: 234 TICVDGGFT 242
            I VDGG+ 
Sbjct: 244 IIYVDGGWL 252

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  215 bits (549), Expect = 3e-70
 Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 30/249 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G   LVTG  KG+G                    +A+L+  +RE    C  +     
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D       E+ +  V     G +++L+NN       +P +E   E        N  +   
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 115 LSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +SQ+    L A G  G I+ VSS C   +    ++Y +TKGA++ L K +A E     IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+V P  + T + +   SD    + +  R P+ +  E + V + + FL    +   TG 
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS 233

Query: 234 TICVDGGFT 242
           T+ V+GGF 
Sbjct: 234 TLPVEGGFW 242

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  214 bits (547), Expect = 1e-69
 Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 21/249 (8%)

Query: 14  SLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCD 55
           SL G TA+VTG   G+G                      + E   E           V D
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +       + +++++    ++++L+NN G      P  E        +++ N ++A+ L
Sbjct: 88  LADLEGAANVAEELAAT--RRVDVLVNNAGIIAR-APAEEVSLGRWREVLTVNLDAAWVL 144

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           S+     + A G+G I+ ++S+           YAA+K A+  L + LA EWA   + +N
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           ++AP ++ T  T    +D++   E+  R P  R   P+++     FL   AASY+ GQ +
Sbjct: 205 ALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVL 264

Query: 236 CVDGGFTVN 244
            VDGG+  +
Sbjct: 265 AVDGGWLAS 273

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  213 bits (544), Expect = 2e-69
 Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 26/255 (10%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
           +  + L G  A VTG   G+G                     A L+   +E         
Sbjct: 4   RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA--VAA 61

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
             V D +          +  ++    ++IL+N+ G        +E        +M+ N +
Sbjct: 62  RIVADVTDAEAMTAAAAEAEAV--APVSILVNSAGIA-RLHDALETDDATWRQVMAVNVD 118

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI--YAATKGAMNQLAKNLACEWA 168
             +  S+     + A GAG I+ + S+ G +         Y A+KGA++QL + LA EWA
Sbjct: 119 GMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWA 178

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              +R+N++AP ++ T +T       +  E     TPM R GEP E+++   FL  PAAS
Sbjct: 179 GRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAAS 238

Query: 229 YITGQTICVDGGFTV 243
           Y+TG  + VDGG+TV
Sbjct: 239 YVTGAILAVDGGYTV 253

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  212 bits (541), Expect = 9e-69
 Identities = 68/251 (27%), Positives = 104/251 (41%), Gaps = 23/251 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSV 53
            L G  AL+TG TKG+G                   + +EL+   R    +    V    
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D +      +L ++ +  F G L++L+NN G +   +P V+   +     ++ N  +  
Sbjct: 77  IDLAEPDAPAELARRAAEAF-GGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPA 134

Query: 114 HLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            L+      ++ A   G II V+S   +        Y  +K  +    K LA E     I
Sbjct: 135 LLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGI 194

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R NSV P  + T + +    DE     +  R P+ R   P EVS  V +L   AAS I G
Sbjct: 195 RANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMING 254

Query: 233 QTICVDGGFTV 243
             I VDGG+T+
Sbjct: 255 VDIPVDGGYTM 265

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  210 bits (538), Expect = 3e-68
 Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 27/258 (10%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
              +SL G  ALVTGG++G+G                   +     +      +      
Sbjct: 22  HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-SAYGDCQ 80

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
               D SS A   +L + +  L   +L+IL+NN GT++       Y       +M  N  
Sbjct: 81  AIPADLSSEAGARRLAQALGELS-ARLDILVNNAGTSWGA-ALESYPVSGWEKVMQLNVT 138

Query: 111 SAYHLSQLAHPLLKASGA----GNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLAC 165
           S +   Q   PLL+ S +      +I + SV G+ +       Y  +K A++QL++ LA 
Sbjct: 139 SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAK 198

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           E   ++I +N +AP    + +T    +D + LE      PM R G P+E+++L   L   
Sbjct: 199 ELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGT 258

Query: 226 AASYITGQTICVDGGFTV 243
           A +Y+TG  I +DGGF +
Sbjct: 259 AGAYMTGNVIPIDGGFHL 276

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  208 bits (531), Expect = 2e-67
 Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 25/253 (9%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
            D   L G  A++TG   G+G                   N    N  + E +    +  
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNF 109
              CD +S  E   L     S   GK++IL+NN G      P    M   D       N 
Sbjct: 64  ACRCDITSEQELSALADFAISKL-GKVDILVNNAGG---GGPKPFDMPMADFRRAYELNV 119

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S +HLSQL  P ++ +G G I+ ++S+         T YA++K A + L +N+A +   
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NIR+N +AP  I T   +  ++ E   +++   TP+ R G+P+++++   FLC PAAS+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVITPE-IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238

Query: 230 ITGQTICVDGGFT 242
           ++GQ + V GG  
Sbjct: 239 VSGQILTVSGGGV 251

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  207 bits (528), Expect = 6e-67
 Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 30/254 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L     +++G    LG                       L +  ++      +      D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A+   L+ +    + G+++++INN     + KP      E +   +      A  L
Sbjct: 69  ITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            Q   P L+ S  G ++ V+S+    S      Y   K A+  +++ LA E     IR+N
Sbjct: 128 IQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186

Query: 176 SVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           SV P +I     + Y            E         + ++R     EV+S + F+    
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246

Query: 227 ASYITGQTICVDGG 240
           AS ITGQ + V+ G
Sbjct: 247 ASGITGQALDVNCG 260

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  207 bits (528), Expect = 1e-66
 Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 28/255 (10%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           D +SL+G  A VTG + G+G                   +     +     KT       
Sbjct: 28  DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKA 87

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFE 110
             C+ S     E+ + Q    F G +++ + N G  +T  P ++    +  + ++S +  
Sbjct: 88  YKCNISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLN 146

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG---TIYAATKGAMNQLAKNLACEW 167
             Y+ S     + K +G G++I+ SS+ G +  N+      Y   K A   LAK+LA EW
Sbjct: 147 GVYYCSHNIGKIFKKNGKGSLIITSSISGKIV-NIPQLQAPYNTAKAACTHLAKSLAIEW 205

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A    R+N+++P +I T +T+     +    +    TP+ R G  +E+     +L   A+
Sbjct: 206 A-PFARVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNAS 262

Query: 228 SYITGQTICVDGGFT 242
           ++ TG  + +DGG+T
Sbjct: 263 TFTTGSDVVIDGGYT 277

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  202 bits (517), Expect = 1e-65
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 16/237 (6%)

Query: 19  TALVTGGTKGLGNE-----AE------LNECLREWKTKCFKVTGSVCDASSRAEREKLMK 67
            ALVTGG++G+G               +     E   +         D   + + + L+K
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLE-KDDPKGLVK 62

Query: 68  QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG 127
           +      G L++L++    N   KP +E   E+   ++  + + A+ L+Q A P +  +G
Sbjct: 63  RALEAL-GGLHVLVHAAAVNVR-KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG 120

Query: 128 AGNIILVSSVCGVLSTNLGTI--YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP 185
            G ++ + SV    +     I  Y   K A+  L + LA EWAR  IR+N + P ++ T 
Sbjct: 121 WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETE 180

Query: 186 LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
            T P   + +  E +  R PM R   P+E++ + A LC   A Y+TGQ + VDGGF 
Sbjct: 181 FTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFL 237

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  200 bits (511), Expect = 3e-64
 Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 37/267 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNEC---LREWKTKCFKVTGS 52
                A++TG + G+G                   +   L E    +         V   
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNF 109
           V D ++ A +++++      F GKL+IL+NN G        K       E     ++ N 
Sbjct: 64  VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
            S   L++ A P L ++  G I+ +SS+   L        Y+  K A++Q  +N A +  
Sbjct: 123 RSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDE-------KFLEEVKCRTPMERPGEPKEVSSLVAF 221
           +  IR+NS++P  + T         E         +  +K   P    G+P++++ ++AF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241

Query: 222 LC-MPAASYITGQTICVDGGFT-VNGF 246
           L     +SYI G  + VDGG + + G 
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSSLIMGL 268

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  200 bits (512), Expect = 5e-64
 Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 35/265 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWK---TKCFKVTGS 52
             G + ++TG + G+G                   NE  L E  ++         K+   
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLSFLMSTNFES 111
           V D +  + ++ ++    + F GK++IL+NN G          +   E        NF++
Sbjct: 84  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARD 170
              ++Q     L  +  G I+ VSS+      + G   YA  K A++Q  +  A +  + 
Sbjct: 143 VIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 171 NIRINSVAPWFITTPLTEPYLSDE-------KFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
            +R+NSV+P  + T         E        F+   K   P+   G+P+E+++++ FL 
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

Query: 224 -MPAASYITGQTICVDGGFT-VNGF 246
               +SYI GQ+I  DGG T V G 
Sbjct: 262 DRNLSSYIIGQSIVADGGSTLVMGM 286

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  199 bits (508), Expect = 6e-64
 Identities = 70/253 (27%), Positives = 112/253 (44%), Gaps = 25/253 (9%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVT 50
           +  + L    A+VTG   G+G                               +    K  
Sbjct: 5   ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI 64

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNF 109
           G  C+ +    RE ++K     F GK+ +L+NN G      P    M   D  +    N 
Sbjct: 65  GLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGG---GGPKPFDMPMSDFEWAFKLNL 120

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S + LSQLA P ++ +G G I+ +SS+ G  +      Y ++K A+N L +N+A +   
Sbjct: 121 FSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGP 180

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR+N++AP  I T      L+ E     +   TP+ R GE +++++   FLC PAA++
Sbjct: 181 MGIRVNAIAPGAIKTDALATVLTPE-IERAMLKHTPLGRLGEAQDIANAALFLCSPAAAW 239

Query: 230 ITGQTICVDGGFT 242
           I+GQ + V GG  
Sbjct: 240 ISGQVLTVSGGGV 252

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  200 bits (510), Expect = 6e-64
 Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 29/255 (11%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTG 51
           D + L G  AL+TG + G+G                   +   L     E      K   
Sbjct: 26  DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP 85

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
             CD +   +   ++ Q++    G ++I + N G   + +  ++   E+   +  TN   
Sbjct: 86  IRCDVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTG 143

Query: 112 AYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLG---TIYAATKGAMNQLAKNLACEW 167
            +  +Q A   +   G  G II  +S+ G +  N+    + Y  +K A+  L K +A E 
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASMSGHI-INIPQQVSHYCTSKAAVVHLTKAMAVEL 202

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A   IR+NSV+P +I T L EP        E    + P+ R G P+E++ L  +L   A+
Sbjct: 203 APHQIRVNSVSPGYIRTELVEPLADYHALWEP---KIPLGRMGRPEELTGLYLYLASAAS 259

Query: 228 SYITGQTICVDGGFT 242
           SY+TG  I +DGG+T
Sbjct: 260 SYMTGSDIVIDGGYT 274

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  198 bits (505), Expect = 3e-63
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 37/267 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNEC---LREWKTKCFKVTGS 52
               T ++TG + G+G                   +   L E    + +      +V   
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNF 109
           V D ++   +++++      F GK+++L+NN G            +   +     +  N 
Sbjct: 64  VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
           ++   +++   P L AS  G I+ VSS+            YA  K A++Q  ++ A + A
Sbjct: 123 QAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDE-------KFLEEVKCRTPMERPGEPKEVSSLVAF 221
           +  IR+NSV+P  + T  T      +        F+   K   P+   G+P+ +++++ F
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 241

Query: 222 LCMPAAS-YITGQTICVDGGFT-VNGF 246
           L     S YI GQ+I  DGG + V G 
Sbjct: 242 LADRNLSFYILGQSIVADGGTSLVMGT 268

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  195 bits (498), Expect = 2e-62
 Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 29/257 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL+G  AL+TG   G G                   ++A       E       V     
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA---A 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  A+ +  ++   S F GK++IL+NN G  +  +       E+   ++  N    Y 
Sbjct: 63  DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 115 LSQLAHPLLKASGAG----NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           ++    P  K +GA      I+ V+S            Y ATKG +  + K LA E A  
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181

Query: 171 NIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            IR+ ++ P    TPL   ++ +  E+  ++ +   PM R  +P +++   AFLC P AS
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS 241

Query: 229 YITGQTICVDGGFTVNG 245
            ITG  + VDGG ++ G
Sbjct: 242 MITGVALDVDGGRSIGG 258

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  194 bits (496), Expect = 4e-62
 Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 22/251 (8%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL+    +VTG   G+G                    E  LN+ ++E +    +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S + + E+ +++    +  ++++L NN G      P  E   E    +++ N  SA++
Sbjct: 64  DVSKKKDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            S+   P++   G G I+  +S+ G+     G  Y   K  +  L +++A  +    IR 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

Query: 175 NSVAPWFITTPLTE--PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +V P  + T +       S+       K  +   R  EP+++++++ FL    AS++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242

Query: 233 QTICVDGGFTV 243
             + VDGG TV
Sbjct: 243 DAVVVDGGLTV 253

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  194 bits (496), Expect = 5e-62
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 23/250 (9%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+G   ++TG + GLG                     E E N  L E K    +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  ++   L++     F GKL+++INN G       + E    D + ++ TN   A+ 
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGL-ENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 115 LSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            S+ A    ++    G +I +SSV   +   L   YAA+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P  I TP+     +D +   +V+   PM   GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242

Query: 234 TICVDGGFTV 243
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  193 bits (492), Expect = 9e-62
 Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 45/258 (17%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           S      LVTGG+KG+G                     ++   E           +    
Sbjct: 1   SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----------NLKFIK 50

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D + + +   ++  +    N   + +  N G         +   E +  ++  N  S+ 
Sbjct: 51  ADLTKQQDITNVLDIIK---NVSFDGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSSI 106

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +  +     LK   +  I+   S    ++      Y  +KGA+ Q+ K+LA + A+  IR
Sbjct: 107 YFIKGLENNLKVGAS--IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIR 164

Query: 174 INSVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           +N+V P  + T L    +           ++  ++ +   P+ R  +P+E++ LV FL  
Sbjct: 165 VNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLS 224

Query: 225 PAASYITGQTICVDGGFT 242
             + ++TG  I +DGG+T
Sbjct: 225 DKSKFMTGGLIPIDGGYT 242

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  193 bits (492), Expect = 2e-61
 Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 24/257 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +++    ++TGG+ G+G                    + +L E   E +    ++     
Sbjct: 3   AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D  +  + +K+++Q+   F G+++ILINN   N+   P  +      + +++      ++
Sbjct: 63  DVRNTDDIQKMIEQIDEKF-GRIDILINNAAGNFIC-PAEDLSVNGWNSVINIVLNGTFY 120

Query: 115 LSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA-RDNI 172
            SQ      ++    GNII + +     +       AA K  +  + K LA EW  +  I
Sbjct: 121 CSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGI 180

Query: 173 RINSVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           R+N++AP  I        L   E+  +      P+ R G P+E++ L  +LC   A+YI 
Sbjct: 181 RVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN 240

Query: 232 GQTICVDGGFTVNGFFF 248
           G  + +DGG  ++ + F
Sbjct: 241 GTCMTMDGGQHLHQYPF 257

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  193 bits (494), Expect = 2e-61
 Identities = 63/252 (25%), Positives = 98/252 (38%), Gaps = 23/252 (9%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G  A+VTG + G+G                   N   L E   E      +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
               A  E L++     F G L+   NN G             E     + TN  SA+  
Sbjct: 66  VGDEALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRI 174
           ++   P + A G G++   SS  G  +   G   YAA+K  +  L + LA E     IR+
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184

Query: 175 NSVAPWFITTPLTEPYL--SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           N++ P    TP     L  +  +    V+    ++R   P+E++    +L    AS++TG
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTG 244

Query: 233 QTICVDGGFTVN 244
             +  DGG +V 
Sbjct: 245 AALLADGGASVT 256

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  192 bits (491), Expect = 2e-61
 Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 34/259 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
             G   LVTG    +G                   N   L +     + K  +    VCD
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +S       +  V   F GK++ L NN G      P  +Y ++D + +++ N   A+H+
Sbjct: 65  VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +     +     G I+  +S+ GV        Y  +KGA+  L +  A + A  NIR+N
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183

Query: 176 SVAPWFITTPLTEPYLSD--------------EKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           +++P ++          +              +   +++    PM R G+  E+  +VAF
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 243

Query: 222 LCMPAASYITGQTICVDGG 240
           L    +S++TG  + + GG
Sbjct: 244 LLGDDSSFMTGVNLPIAGG 262

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  192 bits (491), Expect = 2e-61
 Identities = 69/259 (26%), Positives = 107/259 (41%), Gaps = 32/259 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSV 53
            + G  A++TG + G+G                       L+E  R  K K   +V    
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D ++    + +++ V S F G  +IL+NN GT  + +  +E   E   F       +A 
Sbjct: 64  VDVATPEGVDAVVESVRSSF-GGADILVNNAGT-GSNETIMEAADEKWQFYWELLVMAAV 121

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            L++   P ++A G G II  +S+C V       IY  TK A+   +K LA E  +DNIR
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 174 INSVAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +N + P  I TP       +                     P++R   P+E+++   FLC
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC 241

Query: 224 MPAASYITGQTICVDGGFT 242
              A+Y  G    VDGG  
Sbjct: 242 SERATYSVGSAYFVDGGML 260

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  191 bits (487), Expect = 7e-61
 Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 23/248 (9%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDA 56
              A+VTG + G G                   +   L E  R        KV     D 
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINN--VGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           +   +    +      F G +++L+NN  +  N           E    +M+ N    + 
Sbjct: 62  ADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
             +   P +   GAG I+ ++SV  +++    + Y  +KGA+ QL K++A ++A   IR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N+V P  I TP+T+  L   +  ++V  R P +  G   +V+  V FL    A+Y+ G  
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA 240

Query: 235 ICVDGGFT 242
           + +DG +T
Sbjct: 241 LVMDGAYT 248

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  191 bits (488), Expect = 7e-61
 Identities = 52/266 (19%), Positives = 94/266 (35%), Gaps = 33/266 (12%)

Query: 11  DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KV 49
             + L    A+VTGG+ G+G                   +   L       + +    ++
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
             SVCD     +     +       G  +IL+NN G         E   E  S  +   F
Sbjct: 62  FASVCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRV-STFAETTDEAWSEELQLKF 119

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S  H  +   P L++     I+ V+S+            +A +  +  L +++A E+A 
Sbjct: 120 FSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAP 179

Query: 170 DNIRINSVAPWFITTPLTE----------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLV 219
             +R+N +    + +                 +          + P+ R G+P E +  +
Sbjct: 180 KGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI 239

Query: 220 AFLCMPAASYITGQTICVDGGFTVNG 245
            FL  P ++Y TG  I V GG + + 
Sbjct: 240 LFLASPLSAYTTGSHIDVSGGLSRHA 265

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  191 bits (488), Expect = 9e-61
 Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 31/252 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L    A++TG T G+G                    +  L+  + E         G   D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG---AVGIQAD 83

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
           +++ AE ++L ++V +   G++++L  N G   +  P  E   E        N +     
Sbjct: 84  SANLAELDRLYEKVKAEA-GRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFDRNVKGVLFT 141

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            Q A PLL    +  ++L  S  G   T   ++YAA+K A+   A+N   +     IRIN
Sbjct: 142 VQKALPLLARGSS--VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRIN 199

Query: 176 SVAPWFITTPLTEPYLSD-----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           +++P    T              +  L  +  + PM R G  +EV++   FL    +S++
Sbjct: 200 TLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFV 259

Query: 231 TGQTICVDGGFT 242
           TG  + VDGG  
Sbjct: 260 TGAELFVDGGSA 271

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  191 bits (487), Expect = 1e-60
 Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 32/262 (12%)

Query: 10  QDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKV 49
               S    T +VTGG +G+G                        +    +  K    K 
Sbjct: 7   GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKT 66

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               CD S+     K ++Q+ +   G ++ LI N G +    P  E   ED +F+   N 
Sbjct: 67  KAYQCDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVK-PATELTHEDFAFVYDVNV 124

Query: 110 ESAYHLSQ-LAHPLLKASGAGNIILVSSVCGV------LSTNLG-TIYAATKGAMNQLAK 161
              ++  + +A   L+    G+I++ SS+         L+ +L    Y ++K A + L K
Sbjct: 125 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            LA EWA   IR+N+++P ++ T  T     D+K  +      P+ R  +P+E++     
Sbjct: 185 GLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAIL 242

Query: 222 LCMPAASYITGQTICVDGGFTV 243
           L    A+Y+TG    +DGG  +
Sbjct: 243 LLSDHATYMTGGEYFIDGGQLI 264

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  191 bits (487), Expect = 3e-60
 Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 24/254 (9%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSV 53
           S QG  A +TGG  GLG                       L     +  ++   KV    
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD       +  + ++  +  G  NI+INN   N+ + PT          +         
Sbjct: 83  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFIS-PTERLSPNAWKTITDIVLNGTA 140

Query: 114 HLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            ++  +   L+KA      + ++++     +      A+ K  +  ++K+LA EW +  +
Sbjct: 141 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 200

Query: 173 RINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           R N + P  I T      L     F +E+  R P  R G  +E+++L AFLC   AS+I 
Sbjct: 201 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN 260

Query: 232 GQTICVDGGFTVNG 245
           G  I  DGG  V  
Sbjct: 261 GAVIKFDGGEEVLI 274

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  189 bits (483), Expect = 3e-60
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
            Q   ALVTG ++G+G                    ++    E   E +    KV     
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           +    A+ +++ +Q+   F G+L++ +NN  +    +P +E       + M+ N ++   
Sbjct: 62  NVGQPAKIKEMFQQIDETF-GRLDVFVNNAAS-GVLRPVMELEETHWDWTMNINAKALLF 119

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
            +Q A  L++ +G G+I+ +SS+  +       T    +K A+  L + LA E +   I 
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIR-YLENYTTVGVSKAALEALTRYLAVELSPKQII 178

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+V+   I T   + + + E  LE+ +  TP  R  E K++   V FL    A  I GQ
Sbjct: 179 VNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQ 238

Query: 234 TICVDGG 240
           TI VDGG
Sbjct: 239 TIIVDGG 245

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  190 bits (484), Expect = 4e-60
 Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 25/248 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+   A++TG   G+G                    E +L                   D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHV---VD 65

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
            ++      L+      F G+L+I+ NN   ++       +   +      + N      
Sbjct: 66  LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           + + A P L ++G G I+ +SS     + ++ T YA TK A+  L + +A ++ R  +R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N++AP  + TP  E  L  +  ++         R GEP E++ LV FL    A++ITGQ 
Sbjct: 185 NAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQV 243

Query: 235 ICVDGGFT 242
           I  D G  
Sbjct: 244 IAADSGLL 251

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  189 bits (483), Expect = 4e-60
 Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 37/253 (14%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
            +G  ALVTG   G+G                     A +   L               D
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGD 74

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
               A  + L   V++   G+L+I++NN G   +     E    D S  +  N E+ + +
Sbjct: 75  LREAAYADGLPGAVAAGL-GRLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRI 132

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            + A PL+ A+G G I+ V+S  G+       +Y  TK A+  L + +  + A   IRIN
Sbjct: 133 CRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRIN 192

Query: 176 SVAPWFITTPLTEPYLSD-----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           +V P  + TP+     +      ++ + E+    P+ R  EP++++ +V FL   AA Y+
Sbjct: 193 AVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYL 252

Query: 231 TGQTICVDGGFTV 243
            G  + V+GG  V
Sbjct: 253 CGSLVEVNGGKAV 265

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  189 bits (483), Expect = 6e-60
 Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 29/259 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +     AL+TG   G+G                      E+ E   E      +      
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S   +    ++ +   F G L+I++ N G N    P  +    +    ++ N    + 
Sbjct: 85  DVSDELQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLS-TNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
              L  P LK  G G I++VSS+ G  + T  G T Y ATK A   + + LA E  + +I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEV-------KCRTPMERPGEPKEVSSLVAFLCMP 225
           R+N+V P  I T +++      +    +       +      +PG  ++V+ L+ FL   
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263

Query: 226 AASYITGQTICVDGGFTVN 244
            A ++TG  + +DGG  + 
Sbjct: 264 RARHVTGSPVWIDGGQGLL 282

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  188 bits (480), Expect = 9e-60
 Identities = 57/252 (22%), Positives = 93/252 (36%), Gaps = 28/252 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
             +    +VTG   G+G                   N        ++             
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT--VEYMAEDLSFLMSTNFESA 112
           D S     + +  +  + F G ++ L+NN       K    +    E     MS N + A
Sbjct: 66  DVSDPESAKAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARDN 171
              ++  +  +   G G I+  SS    L S      Y   K  +N L + L+ E    N
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY----YGLAKVGINGLTQQLSRELGGRN 180

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           IRIN++AP  I T         ++ ++++    P+ R G P ++  +  FL    AS+IT
Sbjct: 181 IRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWIT 239

Query: 232 GQTICVDGGFTV 243
           GQ   VDGG  +
Sbjct: 240 GQIFNVDGGQII 251

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  188 bits (479), Expect = 1e-59
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 34/250 (13%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           TA+VT      G                   +  + +E       + F  T       S 
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 56

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            E  +L++ V+S + G++++L++N       +P  +Y  ED    +       + L    
Sbjct: 57  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
              +K   +G+II ++S           + Y + +     LA  L+ E    NI + ++ 
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGP-WKELSTYTSARAGACTLANALSKELGEYNIPVFAIG 174

Query: 179 PWFITTPLTE------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           P ++ +  +       P+ ++ + +  VK  T ++R G  KE+  LVAFL   +  Y+TG
Sbjct: 175 PNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTG 234

Query: 233 QTICVDGGFT 242
           Q   + GGF 
Sbjct: 235 QVFWLAGGFP 244

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  188 bits (479), Expect = 1e-59
 Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 35/253 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G   ++T   +G+G                   NE++L E  +    +       V D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTR-----VLD 58

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + + + ++   +V      +L++L N  G  +     ++   +D  F M+ N  S Y +
Sbjct: 59  VTKKKQIDQFANEV-----ERLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRI 174
            +   P + A  +GNII +SSV   +   +   +Y+ TK A+  L K++A ++ +  IR 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 175 NSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           N V P  + TP  +  +      E+   +   R    R    +E++ L  +L    ++Y+
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV 232

Query: 231 TGQTICVDGGFTV 243
           TG  + +DGG+++
Sbjct: 233 TGNPVIIDGGWSL 245

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  188 bits (481), Expect = 1e-59
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 28/252 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L     +VTGG  G+G                   NE        E  +K F V     D
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR---VD 81

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            SS  + E ++++ ++ + G++++L+NN G   TT   V    E    +MS N +  +  
Sbjct: 82  VSSAKDAESMVEKTTAKW-GRVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGIFLC 139

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           S+   P+++ +G G+II  +S     +    T Y A+KGA++ L + +A + A++ IR+N
Sbjct: 140 SKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVN 199

Query: 176 SVAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +VAP  I +P      ++     K   +   R  M+R G  +E++  + FL    + + T
Sbjct: 200 AVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFAT 259

Query: 232 GQTICVDGGFTV 243
           G  + VDGG ++
Sbjct: 260 GSILTVDGGSSI 271

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  187 bits (477), Expect = 3e-59
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 29/250 (11%)

Query: 15  LQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDA 56
             G   LVTGG +G+G                     E  E         F+      D 
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQ-----VDL 58

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
               ER + +++ +    G++++L+NN          +     +   ++  N  +  HLS
Sbjct: 59  EDERERVRFVEEAAYAL-GRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
            LA   ++  G G I+ V+SV G+ +      Y A+KG +  L ++LA + A   IR+N+
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176

Query: 177 VAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           VAP  I T      ++     E+   + +    + R G+P+EV+  V FL    AS+ITG
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236

Query: 233 QTICVDGGFT 242
             + VDGG T
Sbjct: 237 AILPVDGGMT 246

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  187 bits (478), Expect = 4e-59
 Identities = 64/265 (24%), Positives = 101/265 (38%), Gaps = 38/265 (14%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  AL+TGG  GLG                   +   L E           V   V D
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGV---VGD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF----LMSTNFES 111
             S  ++++  ++  + F GK++ LI N G    +    +   + +      +   N + 
Sbjct: 60  VRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
             H  +   P L +S  G+++   S  G      G +Y ATK A+  L + +A E A  +
Sbjct: 119 YIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-H 176

Query: 172 IRINSVAPWFITTPLTEP--------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +R+N VAP  + T L  P         +S     + +K   P+ R    +E +    F  
Sbjct: 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFA 236

Query: 224 MPAAS-YITGQTICVDGGFTVNGFF 247
               S   TG  +  DGG  V GF 
Sbjct: 237 TRGDSLPATGALLNYDGGMGVRGFL 261

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  187 bits (477), Expect = 4e-59
 Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSV 53
                 L+TGG  GLG                   +   L              +V  +V
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  A+ E  +   +  F G+++   NN G      PT  + A +   ++S N    +
Sbjct: 71  ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
              +    +++  G+G ++  +SV G+      + YAA K  +  L +N A E+ R  IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189

Query: 174 INSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           IN++AP  I TP+ E  +         K  EE     P +R GE  E++++VAFL    A
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249

Query: 228 SYITGQTICVDGGFT 242
           SY+    + +DGG +
Sbjct: 250 SYVNATVVPIDGGQS 264

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  186 bits (476), Expect = 5e-59
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)

Query: 11  DRWSLQGMTALVTG--GTKGLG--------------------NEAELNECLRE-WKTKCF 47
           D+ SL+G   +VTG  G KG+G                          E ++E  KT   
Sbjct: 14  DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI 73

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           K     C   S    EKL+K V + F G+++  I N G        ++   E  + ++  
Sbjct: 74  KAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGAT-ADSGILDGSVEAWNHVVQV 131

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG---TIYAATKGAMNQLAKNLA 164
           +    +H ++      K  G G++++ +S+ G ++ N     T Y   K     +A++LA
Sbjct: 132 DLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIA-NFPQEQTSYNVAKAGCIHMARSLA 190

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            EW     R+NS++P +I T L++     ++  +      PM R G  KE+     +   
Sbjct: 191 NEWRD-FARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFAS 247

Query: 225 PAASYITGQTICVDGGFT 242
            A++Y TG  + +DGG+T
Sbjct: 248 DASTYTTGADLLIDGGYT 265

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  187 bits (478), Expect = 7e-59
 Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 31/262 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS-- 52
            LQG  A+VTGG  G+G                       L     E +        +  
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 53  ---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               C+  +  E   L+K     F GK+N L+NN G  + + P     ++    ++ TN 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLS-PAEHISSKGWHAVLETNL 132

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWA 168
              +++ +  +        G+I+ +       +     +   A +  +  L K+LA EWA
Sbjct: 133 TGTFYMCKAVYSSWMKEHGGSIVNIIVP--TKAGFPLAVHSGAARAGVYNLTKSLALEWA 190

Query: 169 RDNIRINSVAPWFITTPLTEPYL--SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
              IRIN VAP  I +           + F E    + P +R G P+EVSS+V FL  PA
Sbjct: 191 CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 250

Query: 227 ASYITGQTICVDGGFTVNGFFF 248
           AS+ITGQ++ VDGG ++    +
Sbjct: 251 ASFITGQSVDVDGGRSLYTHSY 272

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  185 bits (473), Expect = 7e-59
 Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 31/247 (12%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVT      G                   + A+  E  R       +       A + 
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF------ESENPGTIALAE 56

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTN--YTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
            + E+L+          ++ +++N          P       D+  +          L Q
Sbjct: 57  QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115

Query: 118 LAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
            A   L+A+G  ++I ++S  G        +Y   + A   L ++ A   +RD I + ++
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175

Query: 178 APWFITTPLTEP---YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
            P F   P   P   + ++ +  E V    P+ R G P E+ +L+ FL    A+ I GQ 
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQF 235

Query: 235 ICVDGGF 241
               GG+
Sbjct: 236 FAFTGGY 242

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  186 bits (474), Expect = 2e-58
 Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 29/252 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  A+VTG   G+G                   +    +    +             D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR---VD 83

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S   +   ++    + F G ++ L+ N G        ++   ED   +++ N   A+  
Sbjct: 84  VSDEQQIIAMVDACVAAF-GGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLC 141

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++ A P +   G G I+ +SS+ G ++      Y  +K  + QL++  A E     IR N
Sbjct: 142 TKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN 201

Query: 176 SVAPWFITTPLTEPYLSD-----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           ++ P F+ TP+ +  ++                    R   P+E++ +V FL    AS I
Sbjct: 202 TLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMI 261

Query: 231 TGQTICVDGGFT 242
           TG T   DGG  
Sbjct: 262 TGTTQIADGGTI 273

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  185 bits (472), Expect = 2e-58
 Identities = 67/251 (26%), Positives = 99/251 (39%), Gaps = 31/251 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
            QG  A+V GGT G+G                   NE+ +     E+  +   V     D
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR---VHALRSD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +   E   L         G +++L  N G     +P  +          + N + A+  
Sbjct: 63  IADLNEIAVLGAAAGQTL-GAIDLLHINAGV-SELEPFDQVSEASYDRQFAVNTKGAFFT 120

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            Q   PL++  G+  I+  SSV         ++Y+A+K A+   A  LA E     IR+N
Sbjct: 121 VQRLTPLIREGGS--IVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVN 178

Query: 176 SVAPWFITTPLTEPYLSD----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           SV+P FI TP             +F       TPM+R G   EV+  V FL    A++ T
Sbjct: 179 SVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTT 237

Query: 232 GQTICVDGGFT 242
           G  + VDGG  
Sbjct: 238 GAKLAVDGGLG 248

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  185 bits (472), Expect = 3e-58
 Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 23/252 (9%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVC 54
           L+   A +TGG  G+G                   +   +    R+       +      
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D  +       + Q    F G+++ILIN    N+   P           +M  +    ++
Sbjct: 85  DVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLC-PAGALSFNAFKTVMDIDTSGTFN 142

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           +S++ +        G I+ +++  G     L     + K A++ + ++LA EW   NIR+
Sbjct: 143 VSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRV 202

Query: 175 NSVAPWFI-TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           NS+AP  I  T         +  L      +P++R G   E++  V +L  P ASY+TG 
Sbjct: 203 NSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGA 262

Query: 234 TICVDGGFTVNG 245
            +  DGG  +  
Sbjct: 263 VLVADGGAWLTF 274

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  184 bits (469), Expect = 4e-58
 Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 27/249 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G T ++TGG +GLG                    + E     RE             D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQH---LD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +   + ++++      F G ++ L+NN G   T         E    ++  N    +  
Sbjct: 60  VTIEEDWQRVVAYAREEF-GSVDGLVNNAGI-STGMFLETESVERFRKVVEINLTGVFIG 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +   P +K +G G+I+ +SS  G++   L + Y A+K  +  L+K  A E   D IR+N
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG-EPKEVSSLVAFLCMPAASYITGQT 234
           SV P    TP+T    +  +  E     TPM R G EP E++  V  L    +SY+TG  
Sbjct: 178 SVHPGMTYTPMTAE--TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235

Query: 235 ICVDGGFTV 243
           + VDGG+T 
Sbjct: 236 LAVDGGWTT 244

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  184 bits (469), Expect = 5e-58
 Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 26/252 (10%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
               T +V G  + +G                            + E +           
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D ++ AE E  +   +  F G+++ L++  G     K   E        ++  N  S + 
Sbjct: 66  DLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
            ++ A P +   GA  I+  SS  G      G   YA +KGA+    + LA E     IR
Sbjct: 125 TAKTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIR 181

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+V P  I+T       +  +  E V   T ++R G  ++V+ LVAFL    A+Y+TG 
Sbjct: 182 VNAVCPGMISTTFH-DTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGA 240

Query: 234 TICVDGGFTVNG 245
              ++GG   + 
Sbjct: 241 CYDINGGVLFSE 252

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  183 bits (467), Expect = 7e-58
 Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 26/250 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  A++TGGT G+G                   +     +  +   T   ++     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
           +S      KL       F G ++ L+NN G     K   E    +   L++ N +  +  
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 116 SQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR--DNI 172
           ++L    +K  G G +II +SS+ G +       Y A+KGA+  ++K+ A + A    ++
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N+V P +I TPL +     E+ + +   +TPM   GEP +++ +  +L    + + TG
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMSQRT-KTPMGHIGEPNDIAYICVYLASNESKFATG 239

Query: 233 QTICVDGGFT 242
               VDGG+T
Sbjct: 240 SEFVVDGGYT 249

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  183 bits (468), Expect = 7e-58
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 41/256 (16%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
                A+VTGG+ G+G                   +E         +K           D
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            ++  E ++ +++ +  + G+++IL+NN G      P      E    ++  N   +Y +
Sbjct: 62  VTNEEEVKEAVEKTTKKY-GRIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGSYLM 119

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++   P++ A G G+II ++SV    +T     Y  +K A+  L +++A ++A   IR N
Sbjct: 120 AKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCN 178

Query: 176 SVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P  I TP+                E+ +EE   + PM R G P+EV+ +VAFL    
Sbjct: 179 AVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238

Query: 227 ASYITGQTICVDGGFT 242
           +S+ITG  + VDGG  
Sbjct: 239 SSFITGACLTVDGGLL 254

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  184 bits (469), Expect = 7e-58
 Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 30/252 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
             G   +VTGG +G+G                   +E+      +E           +CD
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE----LPGAVFILCD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +   + + L+ +    F G+L+ ++NN G +   +   E  A+    L+  N    Y L
Sbjct: 63  VTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++LA P L+ S  GN+I +SS+ G +       Y ATKGA+  + K LA + +   +R+N
Sbjct: 122 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 176 SVAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
            ++P  I TPL E   +        + E     P+ R G+P EV +   FL    A++ T
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 239

Query: 232 GQTICVDGGFTV 243
           G  + V GG  +
Sbjct: 240 GIELLVTGGAEL 251

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  183 bits (467), Expect = 9e-58
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 34/260 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G  A+VTGG+KG+G                   +       +   +   F V     
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D + RA  +  M++      G  ++L  N G   T +P V+   E+  F    N    + 
Sbjct: 66  DVTKRASVDAAMQKAIDAL-GGFDLLCANAGV-STMRPAVDITDEEWDFNFDVNARGVFL 123

Query: 115 LSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            +Q+A    L ++  G I+  +S+   +   L   Y+A+K A+    + LA E A  NIR
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183

Query: 174 INSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           +N V P F+ T + E           ++ E    E    TP+ R  EP++V+ +V FL  
Sbjct: 184 VNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS 243

Query: 225 PAASYITGQTICVDGGFTVN 244
            AA ++TGQ I V GG  ++
Sbjct: 244 DAARFMTGQGINVTGGVRMD 263

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  183 bits (467), Expect = 1e-57
 Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 30/254 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L+G   L+TG ++G+G                      A ++E +   +          
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D ++    ++L+ +  + F G +++LINN G     KP  E        +M  N  S  
Sbjct: 64  ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 114 HLSQLAHPLLKASGA-----GNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEW 167
             ++ A P L A+         +I   S+ G      G  +Y A K  ++ + KN     
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
            +D +R N V+P  + T         +   + +    PM R G  +E++    F     A
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHAD--KTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLA 240

Query: 228 S-YITGQTICVDGG 240
           S YITGQ + ++GG
Sbjct: 241 SGYITGQVLDINGG 254

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  182 bits (464), Expect = 3e-57
 Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 32/252 (12%)

Query: 15  LQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGSVCDASSRA 60
           L+    +VTG + G+G                  +++          K     CD ++  
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEA------KYDHIECDVTNPD 59

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           + +  +  +   + G +++L+NN G   +          +   ++  N    Y+ S+ A 
Sbjct: 60  QVKASIDHIFKEY-GSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAI 117

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW 180
           P +  S   +I+ +SSV   + T   + Y  +K A+  L K++A ++A   +R N+V P 
Sbjct: 118 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPA 176

Query: 181 FITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
            I TPL                EK + E     PM+R G+P+EV+S VAFL    AS+IT
Sbjct: 177 TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFIT 236

Query: 232 GQTICVDGGFTV 243
           G  + VDGG ++
Sbjct: 237 GTCLYVDGGLSI 248

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  180 bits (460), Expect = 1e-56
 Identities = 57/259 (22%), Positives = 93/259 (35%), Gaps = 34/259 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G +AL+TG  +G+G                   +     +   E             D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + +   +  +        G L+IL+NN        P VE   E    L + N       
Sbjct: 63  VTRQDSIDAAIAATVEHA-GGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFT 120

Query: 116 SQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            Q A   + A G  G II ++S  G     L  IY ATK A+  L ++   +  +  I +
Sbjct: 121 LQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINV 180

Query: 175 NSVAPWFITTPLTE---------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           N++AP  +     +               +    V    P  R G  ++++ +  FL   
Sbjct: 181 NAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASA 240

Query: 226 AASYITGQTICVDGGFTVN 244
            + YI  QT  VDGG  ++
Sbjct: 241 ESDYIVSQTYNVDGGNWMS 259

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  180 bits (458), Expect = 2e-56
 Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 38/258 (14%)

Query: 9   RQDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFK 48
            Q   +L     L+TG ++ +G                      A + E LR+       
Sbjct: 19  FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE-LRQAGAVALY 77

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMST 107
                 D S        +  + +     L  +++N               A++ + + S 
Sbjct: 78  -----GDFSCETGIMAFIDLLKTQT-SSLRAVVHNASE---WLAETPGEEADNFTRMFSV 128

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           +  + Y ++    PLL AS   +I+ +S       ++    Y ATK  +  L  + A  +
Sbjct: 129 HMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARF 188

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A   +++N +AP  +     +    D  +      ++ +      + +   + +L    +
Sbjct: 189 A-PLVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL--DS 241

Query: 228 SYITGQTICVDGGFTVNG 245
           +Y+TG T+ V+GG  V G
Sbjct: 242 TYVTGTTLTVNGGRHVKG 259

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  179 bits (457), Expect = 3e-56
 Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 31/247 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  ALV+GG +G+G                    + E      E       V     D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH---LD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A+ +  +    + F G L++L+NN G         +Y   +   ++  N    +  
Sbjct: 62  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGI-LNIGTIEDYALTEWQRILDVNLTGVFLG 119

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +     +K +G G+II +SS+ G+  T     Y ATK A+  L K+ A E     IR+N
Sbjct: 120 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           S+ P  + TP+T+    D         +T + R  EP EVS+LV +L    +SY TG   
Sbjct: 180 SIHPGLVKTPMTDWVPEDIF-------QTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 232

Query: 236 CVDGGFT 242
            VDGG  
Sbjct: 233 VVDGGTV 239

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  178 bits (455), Expect = 6e-56
 Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 27/249 (10%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF-KVTGSV 53
            LQG + +VTGGTKG+G                   + A+++ C+ +       KV G  
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESA 112
            D S RA+ + L  +    F G ++++  N G        +  M  E L+ + + N    
Sbjct: 67  TDVSDRAQCDALAGRAVEEF-GGIDVVCANAG--VFPDAPLATMTPEQLNGIFAVNVNGT 123

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
           ++  Q     L ASG+G ++L SS+ G ++   G + Y ATK A     +  A E A   
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N++ P  I T         E+++  +    P    G P+++  L AFL    A YIT
Sbjct: 184 ITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYIT 241

Query: 232 GQTICVDGG 240
           GQ I VDGG
Sbjct: 242 GQAIAVDGG 250

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  178 bits (454), Expect = 8e-56
 Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 33/259 (12%)

Query: 17  GMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCD 55
              A+VTGG +G+G                      E +  E ++  +    K      D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + +A  +  + + +    G  ++L+NN G     KP +E   EDL  + S N  S +  
Sbjct: 62  VTDKANFDSAIDEAAEKL-GGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFG 119

Query: 116 SQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            Q A       G  G II  +S+  +    + + Y+ TK A+  L +  A E A     +
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV 179

Query: 175 NSVAPWFITTPLTE---------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           N+ AP  + T + E               +  +E      + RP  P++V+ LV+FL   
Sbjct: 180 NAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE 239

Query: 226 AASYITGQTICVDGGFTVN 244
            ++Y+TGQ + VDGG   N
Sbjct: 240 NSNYVTGQVMLVDGGMLYN 258

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  178 bits (453), Expect = 1e-55
 Identities = 71/249 (28%), Positives = 104/249 (41%), Gaps = 27/249 (10%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+   A++TGG  G+G                       E    +R    +   V    C
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTV---KC 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S   + E   KQV S F G+ +IL+NN G  Y   P  E   E        N +S + 
Sbjct: 62  DVSQPGDVEAFGKQVISTF-GRCDILVNNAGI-YPLIPFDELTFEQWKKTFEINVDSGFL 119

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
           +++   P +K +G G II ++S    L      T Y +TK A     + LA +  +D I 
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTSTTYWLK-IEAYTHYISTKAANIGFTRALASDLGKDGIT 178

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++AP  + T  TE       F         + R   P +++   AFL    AS+ITGQ
Sbjct: 179 VNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ 238

Query: 234 TICVDGGFT 242
           T+ VDGG  
Sbjct: 239 TLAVDGGMV 247

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  178 bits (453), Expect = 1e-55
 Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 32/257 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +L+G TALVTG T G+G                    +      L E      K      
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  A+ E L       F G ++IL+NN G  +   P  ++  E    +++ N  + +H
Sbjct: 59  DLSDVAQIEALFALAEREF-GGVDILVNNAGIQHVA-PVEQFPLESWDKIIALNLSAVFH 116

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            ++LA P ++A   G II ++SV G++ +     Y A K  +  L K +  E A  N+  
Sbjct: 117 GTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTC 176

Query: 175 NSVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           N++ P ++ TPL +  + D         +   + +  + P      P+ +  LV FLC  
Sbjct: 177 NAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE 236

Query: 226 AASYITGQTICVDGGFT 242
           A S + G    VDGG+ 
Sbjct: 237 AGSQVRGAAWNVDGGWL 253

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  177 bits (452), Expect = 2e-55
 Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 25/248 (10%)

Query: 15  LQGMTALVTGGT-KGLG-------------------NEAELNECLREWKTKCF-KVTGSV 53
           L+G   LVT     G+G                   +E  L E   +       +V   V
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD +S    + L+ Q      G+L++L+NN G    T P V+   E+   +++    S  
Sbjct: 80  CDVTSTEAVDALITQTVEKA-GRLDVLVNNAGLGGQT-PVVDMTDEEWDRVLNVTLTSVM 137

Query: 114 HLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
             ++ A          G I+  +SV G  + +  + YAA K  +  L +  A E     +
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           RIN+V+P        E   S  + L+ +       R  EP EV++ +AFL    +SY+TG
Sbjct: 198 RINAVSPSIARHKFLEK-TSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTG 256

Query: 233 QTICVDGG 240
           + + V   
Sbjct: 257 EVVSVSSQ 264

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  177 bits (451), Expect = 2e-55
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 35/256 (13%)

Query: 10  QDRWSLQGMTALVTGGTKGLG----------------NEAELNECLREWKTKCFKVTGSV 53
           Q     Q    ++TG ++G+G                    +             +    
Sbjct: 21  QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP------DIHTVA 74

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S     ++++++    F G+++ L+NN G     KP VE   ED    +  N    +
Sbjct: 75  GDISKPETADRIVREGIERF-GRIDSLVNNAGVF-LAKPFVEMTQEDYDHNLGVNVAGFF 132

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT---IYAATKGAMNQLAKNLACEWARD 170
           H++Q A   +   G+G+I+ +++        +G    + + TKG +N + ++LA E++R 
Sbjct: 133 HITQRAAAEMLKQGSGHIVSITTSLVDQP-MVGMPSALASLTKGGLNAVTRSLAMEFSRS 191

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            +R+N+V+P  I TP+        +    +    P+ R GE ++V   V +L    A +I
Sbjct: 192 GVRVNAVSPGVIKTPMH-----PAETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFI 244

Query: 231 TGQTICVDGGFTVNGF 246
           TG+ + VDGG     +
Sbjct: 245 TGEILHVDGGQNAGRW 260

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  176 bits (448), Expect = 8e-55
 Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 28/252 (11%)

Query: 14  SLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTKCFKVTG 51
            L+    ++ GG K LG                      +    N+   E + +  KV  
Sbjct: 8   DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D S+  E  KL       F GK++I IN VG     KP VE    +   + + N + 
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGK-VLKKPIVETSEAEFDAMDTINNKV 125

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           AY   + A   +  +G  +II +++      T   + YA  K  +    +  + E  +  
Sbjct: 126 AYFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQ 183

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N++AP  + T         ++     K +    +  + ++++ ++ FL      +I 
Sbjct: 184 ISVNAIAPGPMDTSFFYG-QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TDGWWIN 241

Query: 232 GQTICVDGGFTV 243
           GQTI  +GG+T 
Sbjct: 242 GQTIFANGGYTT 253

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  176 bits (448), Expect = 9e-55
 Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 31/251 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G T LVTG   G+G                    E  L E +   + +   V   V D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S     E +  +    F G+L+ + +  G  ++   +     E    ++  N   ++ +
Sbjct: 61  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSA-LSWNLPLEAWEKVLRVNLTGSFLV 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRI 174
           ++ A  +L+  G+  ++L  SV G+     G   YAA K  +  LA+ LA E AR  +R+
Sbjct: 119 ARKAGEVLEEGGS--LVLTGSVAGL--GAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174

Query: 175 NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT 234
           N + P  I TP+T          E+    +P+ R G P+EV+    FL    ++YITGQ 
Sbjct: 175 NVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQA 232

Query: 235 ICVDGGFTVNG 245
           + VDGG ++ G
Sbjct: 233 LYVDGGRSIVG 243

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  175 bits (447), Expect = 1e-54
 Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 37/259 (14%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGS 52
            +QG  A+VT G+ GLG                   N  +L        +     +V   
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP-TVEYM-AEDLSFLMSTNFE 110
             D     + ++L ++   L  G  +IL+ + G     +P     +  ED          
Sbjct: 64  AGDIREPGDIDRLFEKARDL--GGADILVYSTGG---PRPGRFMELGVEDWDESYRLLAR 118

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           SA  + + A   +   G G ++ + SV  +       +    +  +  + + LA E A  
Sbjct: 119 SAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPH 178

Query: 171 NIRINSVAPWFITTPLTE---------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            + +N+V P  I T               ++ E+ L+ +  R PM R G+P+E++S+VAF
Sbjct: 179 GVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAF 238

Query: 222 LCMPAASYITGQTICVDGG 240
           L    AS+ITG  I VDGG
Sbjct: 239 LASEKASFITGAVIPVDGG 257

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  175 bits (446), Expect = 1e-54
 Identities = 57/255 (22%), Positives = 95/255 (37%), Gaps = 31/255 (12%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTG  +G+G                   N+A       E             D S R
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            +    ++Q      G  ++++NN G    + P      E +  + + N +      Q A
Sbjct: 64  DQVFAAVEQARKTL-GGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 120 HP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
                K    G II   S  G +      +Y+++K A+  L +  A + A   I +N   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 179 PWFITTPLTE---------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           P  + TP+                     E   R  + R  EP++V++ V++L  P + Y
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 241

Query: 230 ITGQTICVDGGFTVN 244
           +TGQ++ +DGG   N
Sbjct: 242 MTGQSLLIDGGMVFN 256

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  175 bits (445), Expect = 2e-54
 Identities = 59/272 (21%), Positives = 100/272 (36%), Gaps = 73/272 (26%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
             +++G   G+G                    +AE+                 + D S+ 
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
             R++ +  V +  +  ++ L+   G        +    + L  ++S N+  A  L    
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAG--------LGPQTKVLGNVVSVNYFGATELMDAF 97

Query: 120 HPLLKASG---------------------------AGNIILVSSVCGVLSTNLGTI-YAA 151
            P LK                              AG      ++        G + YA 
Sbjct: 98  LPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157

Query: 152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEV-KCRTPMERPG 210
           +K A+    +  A  W    +R+N++AP    TPL +  L D ++ E + K   PM R  
Sbjct: 158 SKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

Query: 211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
           EP E++S++AFL  PAASY+ G  I +DGG  
Sbjct: 218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  175 bits (445), Expect = 2e-54
 Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 33/259 (12%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKC-FKVTGSV 53
           L+G  A+VTG T G+G                    + AE+ +       +   KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S       L+        G+++IL+NN G  +T     ++  E    +++ N  + +
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNLSAVF 119

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           H +  A P +K  G G II ++S  G++++   + Y A K  +    K  A E A   I 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 174 INSVAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
            N++ P ++ TPL E  +S               E +  + P  +   P+++     FL 
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 224 MPAASYITGQTICVDGGFT 242
             AA+ ITG T+ VDGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  174 bits (444), Expect = 3e-54
 Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 42/262 (16%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK--VTGS 52
            L+G TALVTG T G+G                    E  +NE ++E + +     +   
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           V D  +    + ++++       K++ILINN+G  +      +   ED   L   N  S 
Sbjct: 67  VADLGTEQGCQDVIEKY-----PKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVNIMSG 120

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDN 171
             L++     +     G +I ++S   +   +     Y+ATK     L+++LA      N
Sbjct: 121 VRLTRSYLKKMIERKEGRVIFIASEAAI-MPSQEMAHYSATKTMQLSLSRSLAELTTGTN 179

Query: 172 IRINSVAPWFITTPLTEPYLSD-------------EKFLEEVKCRTPMERPGEPKEVSSL 218
           + +N++ P    T   E  L+              ++F++E +  + ++R   P+E++ L
Sbjct: 180 VTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHL 239

Query: 219 VAFLCMPAASYITGQTICVDGG 240
           V FL  P +S I G  + +DGG
Sbjct: 240 VTFLSSPLSSAINGSALRIDGG 261

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  174 bits (444), Expect = 4e-54
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 33/260 (12%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKC-FKVTGS 52
           S+   TA++TG T G+G                       E+     E        V   
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             D +  +E   +M  V+  F G  +IL+NN G  +      ++  E    +++ N  S+
Sbjct: 82  PADMTKPSEIADMMAMVADRF-GGADILVNNAGVQFVE-KIEDFPVEQWDRIIAVNLSSS 139

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           +H  + A P +K  G G II ++S  G++++   + Y A K  +  L K +A E A   +
Sbjct: 140 FHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGV 199

Query: 173 RINSVAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
            +NS+ P ++ TPL E  + D          +   E +    P ++    ++V+SL  +L
Sbjct: 200 TVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYL 259

Query: 223 CMPAASYITGQTICVDGGFT 242
               A+ ITG  + +DGG+T
Sbjct: 260 AGDDAAQITGTHVSMDGGWT 279

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  174 bits (444), Expect = 8e-54
 Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 30/254 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NE----AELNECLREWKTKCFKVTG 51
           L+G   L+TGG  G+G                   +E     E  + + +   KC  + G
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D S     + ++++      G LNIL+NNV   Y  +      AE L      N  S
Sbjct: 105 ---DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            +H+++ A   LK      II  +S+           Y+ATKGA+    ++L+    +  
Sbjct: 161 YFHVTKAALSHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           IR+N VAP  I TPL      ++K + +     PM+RPG+P E++    +L    +SY+T
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDEKK-VSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVT 277

Query: 232 GQTICVDGGFTVNG 245
           GQ I V+GG  VNG
Sbjct: 278 GQMIHVNGGVIVNG 291

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  174 bits (443), Expect = 1e-53
 Identities = 71/249 (28%), Positives = 103/249 (41%), Gaps = 27/249 (10%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF-KVTGSV 53
            L   + LVTGGTKG+G                   +  EL+    E        V G  
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESA 112
            D S         + V   F G L+++  N G     +  ++ M  E LS ++  N +  
Sbjct: 98  LDVSDPGSCADAARTVVDAF-GALDVVCANAGI--FPEARLDTMTPEQLSEVLDVNVKGT 154

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
            +  Q     L ASG G +IL SS+ G ++   G + Y A+K A     +  A E A   
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRG 214

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           + +N++ P  I T         E+++  +    PM   G P ++  L AFL    A YIT
Sbjct: 215 VTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYIT 272

Query: 232 GQTICVDGG 240
           GQ I VDGG
Sbjct: 273 GQAIVVDGG 281

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  172 bits (439), Expect = 1e-53
 Identities = 55/263 (20%), Positives = 90/263 (34%), Gaps = 57/263 (21%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
              +TG   G+G                    +A++                   D S+ 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------EADLSTP 45

Query: 60  AEREKLMKQVSSLF------------------NGKLNILINNVGTNYTTKPTVEYMA-ED 100
             RE  +  V                      N  L + +N  G +       E ++   
Sbjct: 46  GGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ 105

Query: 101 LSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
               +     +A        P+++A  AG+      +           YA +K A+  LA
Sbjct: 106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE-QQGQTHLAYAGSKYAVTCLA 164

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEVSSLV 219
           +    +WA   +R+N VAP  + TPL +   +D        +   P+ R  EP+EV+  +
Sbjct: 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAI 224

Query: 220 AFLCMPAASYITGQTICVDGGFT 242
           AFL  P AS+I G  + VDGG  
Sbjct: 225 AFLLGPQASFIHGSVLFVDGGMD 247

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  173 bits (441), Expect = 1e-53
 Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 28/255 (10%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
                 A+VTGG +G+G                    +   +   + E      +V    
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESA 112
            D +  +  +  +  V + F G+++ L+NN G     +     +  E+   ++  N    
Sbjct: 86  ADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 113 YHLSQLA-HPLLKAS--GAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
              +Q     +L +    + +II ++SV  V++ +     Y  +K  +   ++ LA   A
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVMT-SPERLDYCMSKAGLAAFSQGLALRLA 203

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              I +  V P  I + +T   +S +          PM R GEP+++ ++VA L      
Sbjct: 204 ETGIAVFEVRPGIIRSDMTAA-VSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFG 262

Query: 229 YITGQTICVDGGFTV 243
           + TG  I  DGG ++
Sbjct: 263 FATGSVIQADGGLSI 277

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  172 bits (439), Expect = 1e-53
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 21/250 (8%)

Query: 14  SLQGMTALVTGGTKGLGNE---------AELNECLREWKTKCFKVTGSVCDASSRAEREK 64
              G    VTG  KG+G           A++    + +  + +     V D +  A+  +
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQ 63

Query: 65  LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
           + +++ +    +L+ L+N  G       T +   ED     + N   A++L Q      +
Sbjct: 64  VCQRLLAET-ERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR 121

Query: 125 ASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFIT 183
               G I+ V+S        +G + Y A+K A+  LA ++  E A   +R N V+P    
Sbjct: 122 RQRGGAIVTVASDAAHTP-RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD 180

Query: 184 TPLTE--------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           T +                 F E+ K   P+ +   P+E+++ + FL    AS+IT Q I
Sbjct: 181 TDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDI 240

Query: 236 CVDGGFTVNG 245
            VDGG T+  
Sbjct: 241 VVDGGSTLGA 250

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  172 bits (439), Expect = 2e-53
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 26/253 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQ   A++TGG  G+G                    +    +      +    ++   CD
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 72

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV-EYMAEDLSFLMSTNFESAYH 114
            +   +   L+    +   GKL+I+  NVG   TT  ++ E   ED   +M  N   A+ 
Sbjct: 73  VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +++ A  ++  +  G+I+  +S+        +  +Y ATK A+  L  +L  E     IR
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 191

Query: 174 INSVAPWFITTPLTEPYLS-DEKFLEEVKCR--TPMERPGEPKEVSSLVAFLCMPAASYI 230
           +N V+P+ + +PL       D   +EE+  +           ++V+  VA+L    + Y+
Sbjct: 192 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 251

Query: 231 TGQTICVDGGFTV 243
           +G  + +DGG+T 
Sbjct: 252 SGLNLVIDGGYTR 264

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  171 bits (436), Expect = 3e-53
 Identities = 70/255 (27%), Positives = 104/255 (40%), Gaps = 30/255 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQG  ALVTGG  G+G                   NEA   +   E   +   V     D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR---HD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            SS A+   +M  V     G LN+L+NN G             ED S L+  N ES +  
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN--IR 173
            Q     +K +G G+II ++SV   L       Y+A+K A++ L +  A    +    IR
Sbjct: 119 CQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 174 INSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           +NS+ P  I TP+ +  L     ++ +          R   P+ ++ LV FL    +S +
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237

Query: 231 TGQTICVDGGFTVNG 245
           +G  +  D      G
Sbjct: 238 SGSELHADNSILGMG 252

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  172 bits (438), Expect = 6e-53
 Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 30/253 (11%)

Query: 15  LQGMTALVTGGTKGLG--------------------NE----AELNECLREWKTKCFKVT 50
           L+   ALVTGG  G+G                     E     ++   + E   K   + 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
           G   D S  +    L+ +      G L+IL    G         +  +E      + N  
Sbjct: 107 G---DLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           + + ++Q A PLL    +  II  SS+     +     YAATK A+   ++ LA + A  
Sbjct: 163 ALFWITQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            IR+N VAP  I T L       +  + +   +TPM+R G+P E++ +  +L    +SY+
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV 280

Query: 231 TGQTICVDGGFTV 243
           T +   V GG  +
Sbjct: 281 TAEVHGVCGGEHL 293

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  169 bits (431), Expect = 3e-52
 Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 25/248 (10%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
                 A+VTG ++G+G                      A   E   + +    K   + 
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  A   +L       F G +++L+NN G         E        +++ N +  +
Sbjct: 84  ADVSDPAAVRRLFATAEEAF-GGVDVLVNNAGI-MPLTTIAETGDAVFDRVIAVNLKGTF 141

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +  + A   L+  G   II +S+    L      IYAA K  +  +   L+ E    +I 
Sbjct: 142 NTLREAAQRLRVGGR--IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDIT 199

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+VAP    T L     SDE   +      P+ER G P++++  VAFL  P  +++ GQ
Sbjct: 200 VNAVAPGPTATDLFLEGKSDE-VRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQ 258

Query: 234 TICVDGGF 241
            +  +GG 
Sbjct: 259 VLRANGGI 266

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  168 bits (427), Expect = 7e-52
 Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 32/251 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G TALVTG  +G+G                   N             K   +     D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI---AAD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT-VEYM-AEDLSFLMSTNFESAY 113
            S     + L  ++ +L  G ++IL+NN            + +  +    ++  N    +
Sbjct: 61  ISDPGSVKALFAEIQALT-GGIDILVNNASI---VPFVAWDDVDLDHWRKIIDVNLTGTF 116

Query: 114 HLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
            +++     +  A  AG +I ++S             Y A KG +    + LA E  + N
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAG-TPNMAAYVAAKGGVIGFTRALATELGKYN 175

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I  N+V P  I +   +      +    V+    M+  G+P+ ++ +V+FL    A +IT
Sbjct: 176 ITANAVTPGLIESDGVKA-SPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWIT 234

Query: 232 GQTICVDGGFT 242
           GQT+ VD G  
Sbjct: 235 GQTLNVDAGMV 245

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  168 bits (427), Expect = 8e-52
 Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L+G  ALVTG ++G+G                     + E  E + E ++         
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63

Query: 54  CDASSRAEREKLMKQVSSLFN-----GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
            +  S    E L   + +         K +ILINN G         E   +    ++S N
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRMVSVN 122

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA 168
            ++ + + Q A   L+ +    II +SS    +S      Y+ TKGA+N +   LA +  
Sbjct: 123 AKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG 180

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              I +N++ P F+ T +    LSD    +     +   R GE ++++   AFL  P + 
Sbjct: 181 ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSR 240

Query: 229 YITGQTICVDGG 240
           ++TGQ I V GG
Sbjct: 241 WVTGQLIDVSGG 252

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  167 bits (426), Expect = 1e-51
 Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 36/253 (14%)

Query: 17  GMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCD 55
           G   LVTG ++G+G                     +EA L +   ++  + F V   V D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYV---VGD 58

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  +  ++L+        GK++ L+ N G     +   E        L   NF S   L
Sbjct: 59  ITEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
             +A P LK +  GN++ VSS    +  +    Y ++K A+N  A  LA E     ++  
Sbjct: 118 VGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEER--QVKAI 174

Query: 176 SVAPWFITTPLTE-------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAA 227
           +VAP  + T +         P     + L+  +      +  +    +++ A L +    
Sbjct: 175 AVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234

Query: 228 SYITGQTICVDGG 240
             + GQ +  +  
Sbjct: 235 DGVNGQYLSYNDP 247

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  168 bits (428), Expect = 1e-51
 Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 52/273 (19%)

Query: 14  SLQGMTALVTGGTKGLG----------------------NEAE--LNECLREWKTKCFKV 49
            ++   A+VTG  K +G                        A    +E  +E        
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79

Query: 50  TGSVCDA-SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF----- 103
              + ++    A  E+++      F G+ ++L+NN    Y T P V+   ED S      
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVE 137

Query: 104 -----LMSTNFESAYHLSQLA-------HPLLKASGAGNIILVSSVCGVLSTNLG-TIYA 150
                L+ TN  + + L+          +P   +S   +I+ +          +  ++Y 
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN-LSIVNLCDAMVDQP-CMAFSLYN 195

Query: 151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMER-P 209
             K A+  L ++ A E A   IR+N VAP     P+       E+  ++ + + P+ R  
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRRE 251

Query: 210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
              ++++  V FL   +A YITG  I VDGG +
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  168 bits (427), Expect = 2e-51
 Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 36/259 (13%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L G  AL TG  +G+G                    +     E + E K    +     
Sbjct: 18  PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  +E   L  +  S F G L+ +++N G        +E   E    + + N    +
Sbjct: 78  ADISKPSEVVALFDKAVSHF-GGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQF 135

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
            ++Q      +  G   IIL SS+  V++      +YA +K A+    +  A +     +
Sbjct: 136 FVAQQGLKHCRRGGR--IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 193

Query: 173 RINSVAPWFITTPLTE-----------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            +N +AP  + T + +             +  EK  E +    P++R G P ++   V+ 
Sbjct: 194 TVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSA 253

Query: 222 LCMPAASYITGQTICVDGG 240
           LC   + +I GQ I + GG
Sbjct: 254 LCQEESEWINGQVIKLTGG 272

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  167 bits (424), Expect = 2e-51
 Identities = 46/271 (16%), Positives = 85/271 (31%), Gaps = 52/271 (19%)

Query: 1   MAQAYDHDRQ-----DRWSLQGMTALVTGGTKGLG-------------------NEAELN 36
           M  ++ H         R S      LV GG+  LG                    E    
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA 60

Query: 37  ECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEY 96
           +                   S   E + ++++++S    K++  +   G       + + 
Sbjct: 61  D------------HSFTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDE 107

Query: 97  MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM 156
             + +  ++  N  SA+  + +   LL   G    +L  +   +  T+    Y ATK A 
Sbjct: 108 FLKSVKGMIDMNLYSAFASAHIGAKLLNQGGL--FVLTGASAALNRTSGMIAYGATKAAT 165

Query: 157 NQLAKNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKE 214
           + + K+LA E            + P  + TP    Y+SD  F +     TP+    E   
Sbjct: 166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDD----WTPLSEVAEK-- 219

Query: 215 VSSLVAFLCMPAASYITGQTICVD--GGFTV 243
              L  +     +    G  +  +     T 
Sbjct: 220 ---LFEWSTNSDSRPTNGSLVKFETKSKVTT 247

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  167 bits (426), Expect = 2e-51
 Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 26/250 (10%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
                 LVTGG++G+G                    N    +  +        +      
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D  + A+   +   V   F G+L+ L+NN G     +   E   E +  ++  N   +  
Sbjct: 84  DVGNAADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142

Query: 115 LSQLA-HPLLKASGA--GNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARD 170
            +  A   + +      G I+ VSS+  +L S      YAA+K A++     LA E A +
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            IR+N+V P  I T L            E+    PM+R G P+EV+  + +L  P+ASY+
Sbjct: 203 GIRVNAVRPGIIETDLHAS-GGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYV 261

Query: 231 TGQTICVDGG 240
           TG  + V GG
Sbjct: 262 TGSILNVSGG 271

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  166 bits (424), Expect = 4e-51
 Identities = 59/269 (21%), Positives = 103/269 (38%), Gaps = 43/269 (15%)

Query: 15  LQGMTALVTGGTKGLG--------------------------------NEAELNECLREW 42
           L+G  A +TG  +G G                                +  +L+E +R  
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 43  KTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS 102
           +    ++  +V D        K++    +   G+L+I++ N G     +   +   ED  
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGV-AAPQAWDDITPEDFR 126

Query: 103 FLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK 161
            +M  N    ++      P +   G  G+IIL+SS  G+        Y A+K A+  LA+
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKF--------LEEVKCRTPMERPGEPK 213
             A E  + +IR+NSV P  + TP+    +             L  V      +   EP+
Sbjct: 187 AFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPE 246

Query: 214 EVSSLVAFLCMPAASYITGQTICVDGGFT 242
           +++  V +L    +  +T   I VD G T
Sbjct: 247 DIADTVCWLASDESRKVTAAQIPVDQGST 275

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  166 bits (422), Expect = 5e-51
 Identities = 49/250 (19%), Positives = 91/250 (36%), Gaps = 34/250 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV-- 53
           L     LVTG + G+G                   NE +L +       +  +       
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 54  -CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
                +    ++L ++++  +  +L+ +++N G      P  E   +    +M  N  + 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           + L+Q   PLL  S AG+++  SS  G         YAA+K A   + + LA E+ +  +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N + P    T +       E            ++   P ++  L  +L    +   TG
Sbjct: 188 RVNCINPGGTRTAMRASAFPTE----------DPQKLKTPADIMPLYLWLMGDDSRRKTG 237

Query: 233 QTICVDGGFT 242
            T     G  
Sbjct: 238 MTFDAQPGRK 247

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  166 bits (422), Expect = 6e-51
 Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 28/251 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
                 AL+T GTKGLG                    +   +      +K    ++    
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-EDLSFLMSTNFESA 112
            D + + +  K++++  S F GK++ LINN G     +  +     ++ + ++  N  + 
Sbjct: 64  ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAV 122

Query: 113 YHLSQLAHPLLKASGAGNIILVS--SVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
           +HL +L  P+++    G II              +  + +AA K  +  L K +A E A 
Sbjct: 123 FHLLKLVVPVMRKQNFGRIINYGFQGADSAPG-WIYRSAFAAAKVGLVSLTKTVAYEEAE 181

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I  N V P  I   + E   + ++  +  +  TP+ R G  ++++  ++FLC   +  
Sbjct: 182 YGITANMVCPGDIIGEMKEA--TIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDM 239

Query: 230 ITGQTICVDGG 240
           ITG  I V G 
Sbjct: 240 ITGTIIEVTGA 250

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  166 bits (422), Expect = 8e-51
 Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 28/250 (11%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           SL G TA VTGG++G+G                            + E +    +     
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D       E+ +++      G L+IL+N+ G  + + P  E    D   +M+ NF + +
Sbjct: 88  ADNRDAEAIEQAIRETVEAL-GGLDILVNSAGI-WHSAPLEETTVADFDEVMAVNFRAPF 145

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
              + A   L   G   II + S    L    G ++Y+A+K A+  L K LA +     I
Sbjct: 146 VAIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGI 203

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N V P    T +     +D    E  + R      GEP++++ LVA+L  P   ++TG
Sbjct: 204 TVNIVHPGSTDTDMNP---ADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTG 260

Query: 233 QTICVDGGFT 242
            ++ +DGG  
Sbjct: 261 ASLTIDGGAN 270

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  164 bits (418), Expect = 3e-50
 Identities = 54/254 (21%), Positives = 93/254 (36%), Gaps = 27/254 (10%)

Query: 10  QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKV 49
           Q + S +G  ALVTGG  G+G                       L+    E   +    V
Sbjct: 26  QGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIV 85

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
              VCD     +   L   V + F  +L++L+NN G+N    P  E   E  + +++ N 
Sbjct: 86  RAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANL 144

Query: 110 ESAYHLSQLAHPLLKASGA--GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
             A+  +Q A  ++KA     G II   S+           Y ATK A+  L K+ A + 
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDG 204

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPA 226
              +I    +      T +T    +      +       E     + ++  V ++  +P 
Sbjct: 205 RMHDIACGQIDIGNAATDMTARMSTGVL---QANGEVAAEPTIPIEHIAEAVVYMASLPL 261

Query: 227 ASYITGQTICVDGG 240
           ++ +   T+     
Sbjct: 262 SANVLTMTVMATRM 275

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  164 bits (418), Expect = 6e-50
 Identities = 55/275 (20%), Positives = 103/275 (37%), Gaps = 48/275 (17%)

Query: 15  LQGMTALVTGGTKGLG-------------------------------NEAELNECLREWK 43
           ++G  A +TG  +G G                                  +L E +R+ +
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 44  TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF 103
               ++  S  D       +  +    +   G+L+I++ N               +    
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRD 144

Query: 104 LMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
           ++  N   A+  +++A P ++     G+I+  SS+ G+        Y A+K  ++ L + 
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 163 LACEWARDNIRINSVAPWFITTPLTE--------------PYLSDEKFLEEVKCRTPMER 208
           +A E    NIR+N V P  + TP+                P + D +         P+  
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264

Query: 209 PGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             EP ++S+ + FL    A YITG ++ VDGG  +
Sbjct: 265 -VEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  162 bits (413), Expect = 1e-49
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 34/252 (13%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L+G TA+VTG ++GLG                        L+    E+K     V  + 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFE 110
            D  +  + E ++K     F G+++IL+NN G    T+ T+  +    +D   +++TN +
Sbjct: 62  GDVKNPEDVENMVKTAMDAF-GRIDILVNNAGI---TRDTL-MLKMSEKDWDDVLNTNLK 116

Query: 111 SAYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
           SAY  ++     +LK   +G II ++S+ G++  N G   YAA+K  +    K++A E+A
Sbjct: 117 SAYLCTKAVSKIMLKQ-KSGKIINITSIAGIIG-NAGQANYAASKAGLIGFTKSIAKEFA 174

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              I  N+VAP  I T +T+  L  +K  E      P++R G P+EV+++V FL    ++
Sbjct: 175 AKGIYCNAVAPGIIKTDMTD-VLP-DKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSN 232

Query: 229 YITGQTICVDGG 240
           YITGQ I +DGG
Sbjct: 233 YITGQVINIDGG 244

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  163 bits (414), Expect = 1e-49
 Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 40/259 (15%)

Query: 14  SLQGMTALVTGGTKGLGN--------------------------EAELNECLREWKTKCF 47
            L+   ALVTG   G+G                              L     +      
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVG-T--NYTTKPTVEYMA-EDLSF 103
                  D S       L++QV + F+   +++++  G T   +        M+ +D   
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLH-----MSEDDWDK 118

Query: 104 LMSTNFESAYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAK 161
           +++ N +  + ++Q A   L+     G+II +SS+ G +  N+G T YAA+K  +  L +
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-NVGQTNYAASKAGVIGLTQ 177

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
             A E  R  IR NSV P FI TP+T+  +  +K ++++    PM   G+P++V+ +VAF
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQK-VP-QKVVDKITEMIPMGHLGDPEDVADVVAF 235

Query: 222 LCMPAASYITGQTICVDGG 240
           L    + YITG ++ V GG
Sbjct: 236 LASEDSGYITGTSVEVTGG 254

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  163 bits (415), Expect = 1e-49
 Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 33/251 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
             +   ALVTG  +G+G                    +   +  + E K+  ++ +G   
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           D S + E  +++ ++ +     ++IL+NN G    T+  + ++    ++   ++ TN  S
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAGI---TRDNL-FLRMKNDEWEDVLRTNLNS 155

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            ++++Q     ++     G II +SS+ G+   N+G   Y+++K  +    K+LA E A 
Sbjct: 156 LFYITQPISKRMINN-RYGRIINISSIVGLTG-NVGQANYSSSKAGVIGFTKSLAKELAS 213

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NI +N++AP FI++ +T+  +S E+  + +    P  R G P+EV++L  FL    + Y
Sbjct: 214 RNITVNAIAPGFISSDMTD-KIS-EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 271

Query: 230 ITGQTICVDGG 240
           I G+   +DGG
Sbjct: 272 INGRVFVIDGG 282

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  162 bits (413), Expect = 2e-49
 Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 32/256 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
            +  TA VTG + G+G                   +   ++  +   +     V GS CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +S  E    +      F G + IL+N+ G N     T +      + ++ TN    + +
Sbjct: 82  VTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGG-ETADLDDALWADVLDTNLTGVFRV 139

Query: 116 SQLAHPLLK--ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           ++          +G G I+ ++S  G         Y A+K  +    K++  E A+  I 
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199

Query: 174 INSVAPWFITTPLTE---------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           +N+V P ++ TP+ E           +++++  E    + P+ R   P+EV+ LV +L  
Sbjct: 200 VNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT 259

Query: 225 PAASYITGQTICVDGG 240
            AA+ IT Q + V GG
Sbjct: 260 DAAASITAQALNVCGG 275

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  162 bits (413), Expect = 2e-49
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 42/262 (16%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +     ALVTG T G+G                    E  L   L+E +    +  G  C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGT---NYTTKPTVEYMAEDL-SFLMSTNFE 110
           D  S  E E L+  V   + G +++L+NN G      T +     +A++L   ++ TN  
Sbjct: 79  DVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAE-----LADELWLDVVETNLT 132

Query: 111 SAYHLSQLA---HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
             + +++       +L+  G G I+ ++S  G         Y+A+K  +    K L  E 
Sbjct: 133 GVFRVTKQVLKAGGMLER-GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191

Query: 168 ARDNIRINSVAPWFITTPLTE---------PYLSDEKFLEEVKCRTPMERPGEPKEVSSL 218
           AR  I +N+V P F+ TP+             +S E+  + +  R P+ R  +P EV+ +
Sbjct: 192 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 251

Query: 219 VAFLCMPAASYITGQTICVDGG 240
           VA+L  P A+ +T Q + V GG
Sbjct: 252 VAYLIGPGAAAVTAQALNVCGG 273

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  161 bits (411), Expect = 3e-49
 Identities = 55/259 (21%), Positives = 103/259 (39%), Gaps = 35/259 (13%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L G  ALVTG  +G+G                    +  +  + + E K          
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D     E  KL  Q  + F G L+I ++N G   +     +   E+   + S N    +
Sbjct: 75  ADIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQF 132

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
            +++ A+  L   G   I+L SS      +    ++Y+ +KGA++   +  + +     I
Sbjct: 133 FVAREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKI 190

Query: 173 RINSVAPWFITTPLT----------EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
            +N+VAP    T +               + E+  +     +P+ R G P++V+++V FL
Sbjct: 191 TVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFL 250

Query: 223 CMPAASYITGQTICVDGGF 241
                 ++ G+ + +DGG 
Sbjct: 251 VSKEGEWVNGKVLTLDGGA 269

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  161 bits (409), Expect = 3e-49
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 33/251 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           SL    ALVTG ++G+G                   ++A   +     K K FK  G V 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           + S     +    ++ +     ++IL+NN G    T+  +  M    ++   +++TN  S
Sbjct: 62  NISDIESIQNFFAEIKAEN-LAIDILVNNAGI---TRDNL-MMRMSEDEWQSVINTNLSS 116

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            + +S+     ++K    G II + SV G    N G T Y A K  +   +K+LA E A 
Sbjct: 117 IFRMSKECVRGMMKKR-WGRIISIGSVVGSAG-NPGQTNYCAAKAGVIGFSKSLAYEVAS 174

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NI +N VAP FI T +T+     ++    +  + P  + GEPK++++ VAFL    A Y
Sbjct: 175 RNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKY 232

Query: 230 ITGQTICVDGG 240
           ITGQT+ V+GG
Sbjct: 233 ITGQTLHVNGG 243

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  162 bits (411), Expect = 4e-49
 Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 36/261 (13%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           SL+G  ALVTG  +G+G                    +     E +   K          
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            +     +  ++ ++   +F GKL+I+ +N G   +     +   E+   + + N    +
Sbjct: 86  ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQF 143

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
            +++ A+  L+  G   +IL+ S+ G         +Y+ +KGA+   A+ +A + A   I
Sbjct: 144 FVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 201

Query: 173 RINSVAPWFITTPLT-----------EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            +N VAP  I T +            E   ++E         +P+ R G P +++ +V F
Sbjct: 202 TVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF 261

Query: 222 LCMPAASYITGQTICVDGGFT 242
           L      ++TG+ I +DGG  
Sbjct: 262 LASNDGGWVTGKVIGIDGGAC 282

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  161 bits (411), Expect = 4e-49
 Identities = 40/262 (15%), Positives = 79/262 (30%), Gaps = 42/262 (16%)

Query: 14  SLQGMTALVTGGTKGLG--------------------------NEAELNECLREWKTKCF 47
           +L G T  +TG ++G+G                              ++           
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           +     CD     +    +      F G ++IL+NN    +    T++   +    +   
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLR-GTLDTPMKRFDLMQQV 120

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLAC 165
           N   ++  +Q   P L  +   +I+ ++    +     G  T Y   K  M+ +   LA 
Sbjct: 121 NARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAA 180

Query: 166 EWARDNIRINSVAP-WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           E+    + IN++ P   I T                           P+ ++     +  
Sbjct: 181 EFGPQGVAINALWPRTVIATDAINMLPG-----------VDAAACRRPEIMADAAHAVLT 229

Query: 225 PAASYITGQTICVDGGFTVNGF 246
             A+   GQ +  D      G 
Sbjct: 230 REAAGFHGQFLIDDEVLAQAGI 251

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  160 bits (408), Expect = 5e-49
 Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 39/251 (15%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L+    L+TG   G+G                    E  L E               V 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVM 56

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVG-T--NYTTKPTVEYMA-EDLSFLMSTNFE 110
           D +  A  E+   +  +   G+L+ +++  G T  N+  K     M  ED   ++  N  
Sbjct: 57  DVADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWK-----MPLEDWELVLRVNLT 110

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            ++ +++ A   ++    G+I+L +S   +   NLG   YAA+   +  L + LA E  R
Sbjct: 111 GSFLVAKAASEAMREKNPGSIVLTASRVYL--GNLGQANYAASMAGVVGLTRTLALELGR 168

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             IR+N++AP FI T +T      EK  E+    TP+ R G+P EV+    FL    +S+
Sbjct: 169 WGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF 226

Query: 230 ITGQTICVDGG 240
           ITGQ + VDGG
Sbjct: 227 ITGQVLFVDGG 237

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  160 bits (407), Expect = 7e-49
 Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 34/251 (13%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+G  ALVTG ++G+G                    NE + NE + E K           
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           D ++  +   ++KQ   +F G+++IL+NN G    TK  +  M    E+   +++TN + 
Sbjct: 62  DVANAEDVTNMVKQTVDVF-GQVDILVNNAGV---TKDNL-LMRMKEEEWDTVINTNLKG 116

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            +  ++     +++    G I+ ++SV GV   N G   Y A K  +  L K  A E A 
Sbjct: 117 VFLCTKAVSRFMMRQ-RHGRIVNIASVVGVTG-NPGQANYVAAKAGVIGLTKTSAKELAS 174

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NI +N++AP FI T +T+  L +     E+    P  + GE +++++ V F     + Y
Sbjct: 175 RNITVNAIAPGFIATDMTD-VLDENI-KAEMLKLIPAAQFGEAQDIANAVTFFASDQSKY 232

Query: 230 ITGQTICVDGG 240
           ITGQT+ VDGG
Sbjct: 233 ITGQTLNVDGG 243

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  161 bits (410), Expect = 8e-49
 Identities = 59/279 (21%), Positives = 98/279 (35%), Gaps = 52/279 (18%)

Query: 15  LQGMTALVTGGTKGLG-----------------------------------NEAELNECL 39
           ++G  A VTG  +G G                                      +L E  
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 40  REWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAE 99
              K    ++  +  D       +  +        G+L+I++ N G         +   E
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEE 127

Query: 100 DLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQ 158
           D + ++  N    +   +   P + A G  G+IIL SSV G+ +      Y A K  +  
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 159 LAKNLACEWARDNIRINSVAPWFITTPLTE--------------PYLSDEKFLEEVKCRT 204
           L +    E  +  IR+NSV P  + TP+                P   D   + ++    
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247

Query: 205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           P+    EP ++S+ V F     A YITG T+ +D G  +
Sbjct: 248 PIPW-VEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  160 bits (408), Expect = 8e-49
 Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 33/251 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +L    A+VTG ++G+G                    EA        +K    +  G+V 
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           + +     + L++     F G LN+L+NN G    T+  +  M    ++   ++ TN ++
Sbjct: 85  NVNDATAVDALVESTLKEF-GALNVLVNNAGI---TQDQL-AMRMKDDEWDAVIDTNLKA 139

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            + LS+    P++KA   G I+ ++SV G    N G   YAA K  +  + + LA E   
Sbjct: 140 VFRLSRAVLRPMMKA-RGGRIVNITSVVGSAG-NPGQVNYAAAKAGVAGMTRALAREIGS 197

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I +N VAP FI T +T+  L  E+    +K + P+ R G P++++  VAFL  P A Y
Sbjct: 198 RGITVNCVAPGFIDTDMTK-GLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGY 255

Query: 230 ITGQTICVDGG 240
           ITG T+ V+GG
Sbjct: 256 ITGTTLHVNGG 266

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  161 bits (409), Expect = 9e-49
 Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 42/269 (15%)

Query: 14  SLQGMTALVTGGTKGLG--------------------------------NEAELNECLRE 41
           SLQG  A +TG  +G G                                +  +L+E  R 
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 42  WKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL 101
            + +  K    V D    A   +L+      F G+L++++ N G   +     E   E  
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGV-LSWGRVWELTDEQW 129

Query: 102 SFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKGAMNQLA 160
             ++  N    +   +   P +  +G  G+I++VSS  G+ +T     Y+A+K  +  L 
Sbjct: 130 DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALT 189

Query: 161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE-------EVKCRTPMERPGEPK 213
             LA E     IR+NS+ P+ + TP+ EP    E F                        
Sbjct: 190 NTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTAD 249

Query: 214 EVSSLVAFLCMPAASYITGQTICVDGGFT 242
           EV+ +VA+L    +  +TG  I VD G  
Sbjct: 250 EVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  160 bits (408), Expect = 9e-49
 Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 38/253 (15%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L    ALVTG ++G+G                    +    +E +        +     
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFE 110
            D S  +E E L   V   + G+L++L+NN G    T+ T+  +    +D   ++  N  
Sbjct: 85  ADVSQESEVEALFAAVIERW-GRLDVLVNNAGI---TRDTL-LLRMKRDDWQSVLDLNLG 139

Query: 111 SAYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
             +  S+ A   +LK   +G II ++SV G +  N G   Y+A K  +  L K +A E A
Sbjct: 140 GVFLCSRAAAKIMLKQ-RSGRIINIASVVGEMG-NPGQANYSAAKAGVIGLTKTVAKELA 197

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPAA 227
              I +N+VAP FI T +T   L+ EK LE +    P+ R GE  EV+ +V FL   PAA
Sbjct: 198 SRGITVNAVAPGFIATDMTS-ELAAEKLLEVI----PLGRYGEAAEVAGVVRFLAADPAA 252

Query: 228 SYITGQTICVDGG 240
           +YITGQ I +DGG
Sbjct: 253 AYITGQVINIDGG 265

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  159 bits (404), Expect = 2e-48
 Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 34/251 (13%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
               +ALVTG ++G+G                    ++ +    + E K K         
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           + +   E + ++K+V S F G L++L+NN G    T+  +  M    ++   ++ TN + 
Sbjct: 62  NVADADEVKAMIKEVVSQF-GSLDVLVNNAGI---TRDNL-LMRMKEQEWDDVIDTNLKG 116

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            ++  Q A   +L+   +G II +SSV G +  N G   Y ATK  +  L K+ A E A 
Sbjct: 117 VFNCIQKATPQMLRQ-RSGAIINLSSVVGAVG-NPGQANYVATKAGVIGLTKSAARELAS 174

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I +N+VAP FI + +T+  LSDE   E++  + P+ R G+  ++++ VAFL    A Y
Sbjct: 175 RGITVNAVAPGFIVSDMTD-ALSDEL-KEQMLTQIPLARFGQDTDIANTVAFLASDKAKY 232

Query: 230 ITGQTICVDGG 240
           ITGQTI V+GG
Sbjct: 233 ITGQTIHVNGG 243

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  159 bits (404), Expect = 4e-48
 Identities = 56/272 (20%), Positives = 101/272 (37%), Gaps = 48/272 (17%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKT----KCFKV 49
           + +   A++TGG + +G                    +E      + E            
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67

Query: 50  TGSVCDASS-RAEREKLMKQVSSLFNGKLNILINNVGTNYTT----------KPTVEYMA 98
            G +  +SS     E ++      F G+ ++L+NN    Y T              + + 
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 99  EDLSFLMSTNFESAYHLSQLAHPLLKASGA-----GNIILVSSVCGVLSTNLG-TIYAAT 152
             ++ L  +N  +   L +         GA      +++ +      L    G  +Y   
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL-PLPGFCVYTMA 185

Query: 153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP-GE 211
           K A+  L +  A E A  +IR+N+VAP     P   P    ++  EE + + P+ +    
Sbjct: 186 KHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRRKVPLGQSEAS 241

Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             +++  +AFL    A YITG T+ VDGG  +
Sbjct: 242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  157 bits (400), Expect = 1e-47
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 36/251 (14%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G  ALVTG T G+G                    E +L E   +     F       
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF---VFSA 80

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           + S R   ++L +         ++IL+NN G    T+  + ++    +D   +++ N  +
Sbjct: 81  NLSDRKSIKQLAEVAEREM-EGIDILVNNAGI---TRDGL-FVRMQDQDWDDVLAVNLTA 135

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
           A  L++   H +++    G II ++S+ GV   N G T Y A K  +   +K LA E A 
Sbjct: 136 ASTLTRELIHSMMRRR-YGRIINITSIVGV-VGNPGQTNYCAAKAGLIGFSKALAQEIAS 193

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NI +N +AP FI + +T+    +EK  E +    PM+R G  +E++    +L    A+Y
Sbjct: 194 RNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAY 251

Query: 230 ITGQTICVDGG 240
           +TGQT+ ++GG
Sbjct: 252 LTGQTLHINGG 262

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  156 bits (398), Expect = 2e-47
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 33/251 (13%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
                A VTGG  GLG                        ++  L   +           
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           D +     E+  ++V + F GK+++LINN G    T+    +M     D   +M T+ ++
Sbjct: 83  DVADFESCERCAEKVLADF-GKVDVLINNAGI---TRDAT-FMKMTKGDWDAVMRTDLDA 137

Query: 112 AYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            +++++     +++    G I+ + SV G      G   YA+ K  ++   K LA E A+
Sbjct: 138 MFNVTKQFIAGMVER-RFGRIVNIGSVNGSRG-AFGQANYASAKAGIHGFTKTLALETAK 195

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I +N+V+P ++ T + E  +  +    ++  + P+ R G P EV++L+AFLC   A +
Sbjct: 196 RGITVNTVSPGYLATAMVEA-VPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGF 254

Query: 230 ITGQTICVDGG 240
           +TG  + ++GG
Sbjct: 255 VTGADLAINGG 265

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  156 bits (397), Expect = 2e-47
 Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 34/252 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSV 53
            LQG  +LVTG T+G+G                   +         E   K   K  G  
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFE 110
            +  S     K  +++ +L    ++IL+NN G    T+  + ++     D   ++  N  
Sbjct: 64  MNLLSEESINKAFEEIYNLV-DGIDILVNNAGI---TRDKL-FLRMSLLDWEEVLKVNLT 118

Query: 111 SAYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
             + ++Q +   ++K    G I+ +SSV G    N+G   Y+ TK  +    K+LA E A
Sbjct: 119 GTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTG-NVGQVNYSTTKAGLIGFTKSLAKELA 176

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
             N+ +N+VAP FI T +T   LS E+  ++ K + P+ R G P+EV+++V FLC   AS
Sbjct: 177 PRNVLVNAVAPGFIETDMTA-VLS-EEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELAS 234

Query: 229 YITGQTICVDGG 240
           YITG+ I V+GG
Sbjct: 235 YITGEVIHVNGG 246

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  156 bits (397), Expect = 3e-47
 Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 34/252 (13%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            +    A VTGG  G+G                    N     + L + K   F    S 
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFE 110
            +       ++   +V +   G++++L+NN G    T+  V +     ED   ++ TN  
Sbjct: 70  GNVGDWDSTKQAFDKVKAEV-GEIDVLVNNAGI---TRDVV-FRKMTREDWQAVIDTNLT 124

Query: 111 SAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
           S +++++ +   +++  G G II +SSV G      G T Y+  K  ++    +LA E A
Sbjct: 125 SLFNVTKQVIDGMVER-GWGRIINISSVNGQKG-QFGQTNYSTAKAGIHGFTMSLAQEVA 182

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              + +N+V+P +I T + +  +  +  LE++    P+ R G P E+ S+VA+L    + 
Sbjct: 183 TKGVTVNTVSPGYIGTDMVKA-IRPDV-LEKIVATIPVRRLGSPDEIGSIVAWLASEESG 240

Query: 229 YITGQTICVDGG 240
           + TG    ++GG
Sbjct: 241 FSTGADFSLNGG 252

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  156 bits (396), Expect = 3e-47
 Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 43/251 (17%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            ++    LV   ++G+G                   NE  L      +          VC
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VC 66

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT--VEYMAEDLSFLMSTNFESA 112
           D        K +  +      +++IL+ N G     K     E   ED    + + F + 
Sbjct: 67  DLR------KDLDLLFEKV-KEVDILVLNAGG---PKAGFFDELTNEDFKEAIDSLFLNM 116

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
             + +   P +K  G G I+ ++S   V+S         + + A+    K L+ E A   
Sbjct: 117 IKIVRNYLPAMKEKGWGRIVAITSF-SVISPIENLYTSNSARMALTGFLKTLSFEVAPYG 175

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I +N VAP +  T   +  L  E+  ++V+ + PM R  +P+E++S+VAFLC   ASY+T
Sbjct: 176 ITVNCVAPGWTETERVK-ELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT 234

Query: 232 GQTICVDGGFT 242
           GQTI VDGG +
Sbjct: 235 GQTIVVDGGLS 245

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  156 bits (397), Expect = 4e-47
 Identities = 47/244 (19%), Positives = 80/244 (32%), Gaps = 29/244 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
                 A+VTG   G+G                       L E   E       V     
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVP---T 81

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +       L       F G++++L NN GT     P  +        ++ TN    + 
Sbjct: 82  DVTDPDSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 115 LSQLAHPLLKASGA--GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
            +Q A  ++KA     G II   S+           Y ATK A+  L K+ + +    +I
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPAASYIT 231
               +      TP+ +   +      +      +E   +   V+S V ++  +P  + + 
Sbjct: 201 ACGQIDIGNADTPMAQKMKAGVP---QADLSIKVEPVMDVAHVASAVVYMASLPLDANVQ 257

Query: 232 GQTI 235
             TI
Sbjct: 258 FMTI 261

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  155 bits (395), Expect = 4e-47
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 36/251 (14%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +L+G  ALVTG ++G+G                   +E+                 G   
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK---GMAL 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           + ++    E ++K ++  F G ++IL+NN G    T+  +  M    E+ S +M TN  S
Sbjct: 63  NVTNPESIEAVLKAITDEF-GGVDILVNNAGI---TRDNL-LMRMKEEEWSDIMETNLTS 117

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            + LS+     ++K    G II V SV G +  N G   YAA K  +    K++A E A 
Sbjct: 118 IFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMG-NAGQANYAAAKAGVIGFTKSMAREVAS 175

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             + +N+VAP FI T +T+  L+ ++       + P  R G+P+E++S VAFL  P A+Y
Sbjct: 176 RGVTVNTVAPGFIETDMTK-ALN-DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAY 233

Query: 230 ITGQTICVDGG 240
           ITG+T+ V+GG
Sbjct: 234 ITGETLHVNGG 244

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  155 bits (394), Expect = 6e-47
 Identities = 57/244 (23%), Positives = 94/244 (38%), Gaps = 34/244 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKT---KCFKVTGS 52
           L+G   LVTG  +G+G                    EA L E   + K+       +   
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             + ++  +  +L  +V   F G+L+ L++N        P  +   ED   +M  N  + 
Sbjct: 72  NLENATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW-ARDN 171
           + L++   PLLK S   +I   SS  G         Y  +K A   L + LA E      
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +R NS+ P    T +      DE          P+  P  P+++  +  +L  P ++ I 
Sbjct: 191 VRANSINPGATRTGMRAQAYPDE---------NPLNNPA-PEDIMPVYLYLMGPDSTGIN 240

Query: 232 GQTI 235
           GQ +
Sbjct: 241 GQAL 244

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  155 bits (395), Expect = 6e-47
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 44/261 (16%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSV 53
           + G  ALVTG  +G+G                   N     +C      +    K     
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD + + +     ++V   F G+L+IL+NN G         E   ++    +  N  S  
Sbjct: 65  CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGV------NNE---KNWEKTLQINLVSVI 114

Query: 114 HLSQLAHPLLKASGAGN---IILVSSVCGVLSTNLGTIYAATKGAMNQLAKN--LACEWA 168
             + L    +     G    II +SS+ G++      +Y A+K  +    ++  LA    
Sbjct: 115 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM 174

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDE------KFLEEVKCRTPMERPGEPKEVSSLVAFL 222
              +R+N++ P F+ T + E    +E      ++ + +K         +P  +++ +  L
Sbjct: 175 NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL 234

Query: 223 CMPAASYITGQTICVDGGFTV 243
               A  + G  + +     +
Sbjct: 235 IEDDA--LNGAIMKITTSKGI 253

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  156 bits (396), Expect = 9e-47
 Identities = 59/274 (21%), Positives = 99/274 (36%), Gaps = 48/274 (17%)

Query: 15  LQGMTALVTGGTKGLG-------------------------------NEAELNECLREWK 43
            +G TAL+TGG +G+G                                  +L E +   +
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 44  TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLS 102
               +   +  D   RA  E  + +      G ++I I N G +        E  +    
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIA--LLPEVESAQWD 124

Query: 103 FLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
            ++ TN    ++      P +     G I+ VSS+ G  +      Y ++K  +  L K 
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184

Query: 163 LACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT-------------PMERP 209
            A +     I +N+VAP  I TP+T           +++  T                  
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244

Query: 210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            +P+EV+  V FL   A+S+ITG  + +D G T 
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  153 bits (389), Expect = 3e-46
 Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 35/248 (14%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASS 58
             +VTG ++G+G                    +     E  ++ +    +      D S 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFESAYHL 115
            A+ E +MK     + G +++++NN G    T+ T+  +         ++  N    +  
Sbjct: 63  EADVEAMMKTAIDAW-GTIDVVVNNAGI---TRDTL-LIRMKKSQWDEVIDLNLTGVFLC 117

Query: 116 SQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
           +Q A   ++K    G II ++SV G++  N+G   YAA K  +   +K  A E A  NI 
Sbjct: 118 TQAATKIMMKK-RKGRIINIASVVGLIG-NIGQANYAAAKAGVIGFSKTAAREGASRNIN 175

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAASYITG 232
           +N V P FI + +T   L ++   +++    P+ R G+P+ V+ LV FL + PAASYITG
Sbjct: 176 VNVVCPGFIASDMTA-KLGED-MEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITG 233

Query: 233 QTICVDGG 240
           Q   +DGG
Sbjct: 234 QAFTIDGG 241

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  153 bits (390), Expect = 6e-46
 Identities = 46/261 (17%), Positives = 83/261 (31%), Gaps = 40/261 (15%)

Query: 14  SLQGMTALVTGGTKGLG--------------------------NEAELNECLREWKTKCF 47
           SL+G T  ++GG++G+G                              +    +E +    
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           +    V D          + +    F G ++I +NN           E   +    +   
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLG-SIEEVPLKRFDLMNGI 123

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACE 166
                Y +SQ   P +K     +I+ +S    +    L  T Y   K  M   A  +A E
Sbjct: 124 QVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEE 183

Query: 167 WARDNIRINSVAP-WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
                I  N++ P   + T   +  L  +           M R  +P+  +     +   
Sbjct: 184 LRDAGIASNTLWPRTTVATAAVQNLLGGD---------EAMARSRKPEVYADAAYVVLNK 234

Query: 226 AASYITGQTICVDGGFTVNGF 246
            +SY TG T+  +     +G 
Sbjct: 235 PSSY-TGNTLLCEDVLLESGV 254

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  152 bits (387), Expect = 8e-46
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 40/251 (15%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G T+L+TG + G+G                   NE +L       K         VC
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE---VC 67

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           + +++ E   L+ +        L+IL+ N G    T  T+  +    +D   ++  N ++
Sbjct: 68  NLANKEECSNLISKT-----SNLDILVCNAGI---TSDTL-AIRMKDQDFDKVIDINLKA 118

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
            + L++ A   +++    G II +SS+ G+ + N G   Y A+K  +  + K+L+ E A 
Sbjct: 119 NFILNREAIKKMIQKR-YGRIINISSIVGI-AGNPGQANYCASKAGLIGMTKSLSYEVAT 176

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             I +N+VAP FI + +T+    +EK  E +  + P+   G P++V+  VAFL    ASY
Sbjct: 177 RGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASY 234

Query: 230 ITGQTICVDGG 240
           ITGQT+ V+GG
Sbjct: 235 ITGQTLHVNGG 245

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  154 bits (391), Expect = 1e-45
 Identities = 71/274 (25%), Positives = 113/274 (41%), Gaps = 47/274 (17%)

Query: 15  LQGMTALVTGGTKGLG-------------------------------NEAELNECLREWK 43
           LQG  A +TG  +G G                               +  EL E +R  +
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 44  TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF 103
            +  ++     D    A  + ++ +  + F G ++IL++NVG +      V    +  S 
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGIS-NQGEVVSLTDQQWSD 161

Query: 104 LMSTNFESAYHLSQLAHP-LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
           ++ TN   A+H  +   P +++    G++I VSS  G+      + YAA+K  +  L  +
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLS 221

Query: 163 LACEWARDNIRINSVAPWFITTPLTE------------PYLSDEKFLEEVKCRTPMERP- 209
           LA E  R NIR+NSV P  + T +                 + E   E     T +  P 
Sbjct: 222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW 281

Query: 210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
            EP++VS+ VA+L    A YI G  I VDGG   
Sbjct: 282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  153 bits (389), Expect = 1e-45
 Identities = 54/284 (19%), Positives = 92/284 (32%), Gaps = 61/284 (21%)

Query: 15  LQGMTALVTGGTKGLG-------------------------------NEAELNECLREWK 43
           +Q    LVTGG +G G                                  +L E   E +
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 44  TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF 103
               K   +  D   RA   + +    + F GKL++++ N G             +  + 
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAGI---CPLGAHLPVQAFAD 123

Query: 104 LMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-----------YAAT 152
               +F    +    A P L +  +  II   SV G+++                 Y+  
Sbjct: 124 AFDVDFVGVINTVHAALPYLTSGAS--IITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181

Query: 153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE---------PYLSDEKFLEEVKCR 203
           K  ++     LA + A  +IR N + P  + T +           P L      + +   
Sbjct: 182 KQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF 241

Query: 204 TPMERPG----EPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             M+       E  ++S+ V FL    + Y+TG    VD G  +
Sbjct: 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  152 bits (386), Expect = 1e-45
 Identities = 53/254 (20%), Positives = 98/254 (38%), Gaps = 32/254 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            + G   +VTG ++G+G                   +   L    +E ++   +    VC
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT------KPTVEYMAEDLSFLMSTN 108
           D+S  +E   L +QV     G+L++L+NN      T      K   E  A     + +  
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEW 167
               Y  S     L+  +G G I+++SS   +    +    Y   K A ++LA + A E 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSL--QYMFNVPYGVGKAACDKLAADCAHEL 179

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEE--VKCRTPMERPGE-PKEVSSLVAFLCM 224
            R  +   S+ P  + T L + +++ E+ L++  +K         E  +     V  L  
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239

Query: 225 -PAASYITGQTICV 237
            P    ++G+ +  
Sbjct: 240 DPNILSLSGKVLPS 253

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  150 bits (382), Expect = 5e-45
 Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)

Query: 2   AQAYDHDRQDRW-----SLQGMTALVTGGTKGLG-------------------NEAELNE 37
              +     D       SL G  A+VTG ++G+G                   +  +L  
Sbjct: 9   HHHHSSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRA 68

Query: 38  CLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM 97
             RE      +     CD S           V +   G+ ++L+NN G  +   P     
Sbjct: 69  VEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMK 127

Query: 98  AEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN 157
             +   L++ N ++ Y L +   P + A+  G+II +SS+ G      G  Y A+K  +N
Sbjct: 128 PAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLN 187

Query: 158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSS 217
            L  + A E  +  +R++ VAP  + T      LS +K               EP +++ 
Sbjct: 188 GLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG-LSAKK---------SALGAIEPDDIAD 237

Query: 218 LVAFLCMPAASYITGQTI 235
           +VA L   A      + +
Sbjct: 238 VVALLATQADQSFISEVL 255

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  149 bits (379), Expect = 9e-45
 Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 44/251 (17%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
                + LVTGG +G+G                                       G   
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------GVEV 60

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFES 111
           D +     ++    V     G + +L++N G    +      M    E    +++ N   
Sbjct: 61  DVTDSDAVDRAFTAVEEHQ-GPVEVLVSNAG---LSADAF-LMRMTEEKFEKVINANLTG 115

Query: 112 AYHLSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR 169
           A+ ++Q A   + +    G +I + SV G+         YAA+K  +  +A+++A E ++
Sbjct: 116 AFRVAQRASRSMQRNK-FGRMIFIGSVSGLWG-IGNQANYAASKAGVIGMARSIARELSK 173

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            N+  N VAP +I T +T   L +    +      P +R G P EV+ +V+FL    ASY
Sbjct: 174 ANVTANVVAPGYIDTDMTRA-LDERI-QQGALQFIPAKRVGTPAEVAGVVSFLASEDASY 231

Query: 230 ITGQTICVDGG 240
           I+G  I VDGG
Sbjct: 232 ISGAVIPVDGG 242

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  149 bits (379), Expect = 1e-44
 Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 35/248 (14%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTKCFK-VTGSVCDAS 57
            AL+TG ++G+G                    N  +  E   E + +    V     +  
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFESAYH 114
                  L+ Q + +  G L+ L+NN G    T+ T+  +    ED   ++  N  + + 
Sbjct: 63  EAEAATALVHQAAEVL-GGLDTLVNNAGI---TRDTL-LVRMKDEDWEAVLEANLSAVFR 117

Query: 115 LSQLA-HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNI 172
            ++ A   ++KA   G I+ ++SV G+L  N G   Y A+K  +    + +A E+A+  I
Sbjct: 118 TTREAVKLMMKAR-FGRIVNITSVVGILG-NPGQANYVASKAGLIGFTRAVAKEYAQRGI 175

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            +N+VAP FI T +TE  L  E   E    + P  R G P+EV+  VAFL    A YITG
Sbjct: 176 TVNAVAPGFIETEMTE-RLPQEV-KEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITG 233

Query: 233 QTICVDGG 240
           QT+CVDGG
Sbjct: 234 QTLCVDGG 241

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  149 bits (379), Expect = 1e-44
 Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 28/243 (11%)

Query: 14  SLQGMTALVTGGTKGLGNE-AE----------LNECLREWKTKCFKVTGSVCDASSRAER 62
           S    + LVTGG +G+G   A           +     E       V    CD +   + 
Sbjct: 18  SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAV---KCDITDTEQV 74

Query: 63  EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFESAYHLSQLA 119
           E+  K++     G + +LI N G    TK  +  M    ED + ++ TN    + + + A
Sbjct: 75  EQAYKEIEETH-GPVEVLIANAG---VTKDQL-LMRMSEEDFTSVVETNLTGTFRVVKRA 129

Query: 120 -HPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINSV 177
              +L+A   G ++L+SSV G+L  + G   YAA+K  +   A++LA E    NI  N V
Sbjct: 130 NRAMLRAK-KGRVVLISSVVGLLG-SAGQANYAASKAGLVGFARSLARELGSRNITFNVV 187

Query: 178 APWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
           AP F+ T +T+  L+DE+    +  + P+ R   P+E+++ V FL    ASYITG  I V
Sbjct: 188 APGFVDTDMTK-VLTDEQ-RANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPV 245

Query: 238 DGG 240
           DGG
Sbjct: 246 DGG 248

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  150 bits (381), Expect = 1e-44
 Identities = 59/274 (21%), Positives = 97/274 (35%), Gaps = 52/274 (18%)

Query: 15  LQGMTALVTGGTKGLG-------------------------------NEAELNECLREWK 43
           L G  A +TG  +G G                                  EL   ++  +
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 44  TKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF 103
               ++     D   R      ++       G+L+I++ N G        +    +    
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIA-----PMSAGDDGWHD 124

Query: 104 LMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTI----YAATKGAMNQ 158
           ++  N    YH  ++A P L   G  G+I+L+SS  G+            Y A K  +  
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184

Query: 159 LAKNLACEWARDNIRINSVAPWFITTPLTE---------PYLSDEKFLEEVKCRTPMERP 209
           L +  A   A   IR+NS+ P  + TP+              +       +    P+E  
Sbjct: 185 LMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEV- 243

Query: 210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
             P++V++ VA+L    A YITG T+ VD GF  
Sbjct: 244 LAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  150 bits (381), Expect = 1e-44
 Identities = 65/288 (22%), Positives = 98/288 (34%), Gaps = 65/288 (22%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKT----KCFKV 49
           +     ALVTG  K LG                    + AE N                V
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 50  TGSVCDA--------------SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT----- 90
              + +               +      +L+    + + G+ ++L+NN  + Y T     
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 124

Query: 91  --------KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA------GNIILVSS 136
                       E M    + L  +N  + Y L +     +  + A       +II +  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 137 VCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK 195
                   LG TIY   KGA+  L ++ A E A   IR+N V P         P      
Sbjct: 185 AMTNQ-PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PA 239

Query: 196 FLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
             E  + + P+  R     EVS +V FLC   A YITG  + VDGG++
Sbjct: 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  147 bits (374), Expect = 5e-44
 Identities = 40/247 (16%), Positives = 79/247 (31%), Gaps = 34/247 (13%)

Query: 14  SLQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGSVCDASSR 59
           S +    LV GG   LG+                ++ E      +   K+T S  + + +
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQ 63

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
              E        L + K++ ++   G         + + ++   +   +  ++   S LA
Sbjct: 64  VTAE----VGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA--RDNIRINSV 177
              LK  G   + L  +   +  T     Y   KGA++QL ++LA + +         +V
Sbjct: 120 TKHLKEGGL--LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 177

Query: 178 APWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
            P  + TP+    + +                   + +               +G  I V
Sbjct: 178 LPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV 227

Query: 238 --DGGFT 242
               G T
Sbjct: 228 VTTDGKT 234

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  149 bits (379), Expect = 8e-44
 Identities = 65/288 (22%), Positives = 98/288 (34%), Gaps = 65/288 (22%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKT----KCFKV 49
           +     ALVTG  K LG                    + AE N                V
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 50  TGSVCDA--------------SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT----- 90
              + +               +      +L+    + + G+ ++L+NN  + Y T     
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 161

Query: 91  --------KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA------GNIILVSS 136
                       E M    + L  +N  + Y L +     +  + A       +II +  
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 137 VCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK 195
                   LG TIY   KGA+  L ++ A E A   IR+N V P         P      
Sbjct: 222 AMTNQ-PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PA 276

Query: 196 FLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
             E  + + P+  R     EVS +V FLC   A YITG  + VDGG++
Sbjct: 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  150 bits (381), Expect = 5e-43
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 39/252 (15%)

Query: 15  LQGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSV 53
           L G  A+VTG  +G+G                        +L     +            
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL-----T 265

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM---AEDLSFLMSTNFE 110
            D ++    +K+   V+    GK++IL+NN G    T+  +       +    +++ N  
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGI---TRDKL-LANMDEKRWDAVIAVNLL 321

Query: 111 SAYHLSQ-LAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWA 168
           +   L++ L        G G +I +SS+ G+   N G T YA TK  M  LA+ LA   A
Sbjct: 322 APQRLTEGLVGNGTIGEG-GRVIGLSSMAGIAG-NRGQTNYATTKAGMIGLAEALAPVLA 379

Query: 169 RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
              I IN+VAP FI T +TE  +      E  +    + + G+P +V+ L+A+   PA++
Sbjct: 380 DKGITINAVAPGFIETKMTEA-IPLAT-REVGRRLNSLFQGGQPVDVAELIAYFASPASN 437

Query: 229 YITGQTICVDGG 240
            +TG TI V G 
Sbjct: 438 AVTGNTIRVCGQ 449

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  144 bits (366), Expect = 7e-43
 Identities = 34/248 (13%), Positives = 79/248 (31%), Gaps = 43/248 (17%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           +     +V GG   LG                   +  +  +           V G+   
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-------SNILVDGNKNW 53

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
                E+  L +  SSL   +++ +    G       + +   ++   ++  +  S+   
Sbjct: 54  TE--QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA--RDNIR 173
           ++LA   LK  G   + L  +   +  T     Y   K A++ L  +LA + +   DN  
Sbjct: 112 AKLATTHLKPGGL--LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 169

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPAASYITG 232
           + ++ P  + TP+   ++ +                     +S  +       ++   +G
Sbjct: 170 VLTIMPVTLDTPMNRKWMPNADH----------SSWTPLSFISEHLLKWTTETSSRPSSG 219

Query: 233 QTICVDGG 240
             + +   
Sbjct: 220 ALLKITTE 227

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  144 bits (365), Expect = 1e-42
 Identities = 43/251 (17%), Positives = 74/251 (29%), Gaps = 37/251 (14%)

Query: 14  SLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCF--KVTGSV 53
            L     +      G+G                  +  E    L E K       +T   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 54  CDAS-SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
            D +   AE +KL+K++       ++ILIN  G               +   ++ NF   
Sbjct: 62  YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGI---LDD------HQIERTIAINFTGL 111

Query: 113 YHLSQLAHPLL---KASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            + +          K    G I  + SV G  + +   +Y+A+K A+     +LA     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             +   S+ P    TPL   + S       V            ++             + 
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IEAN 228

Query: 230 ITGQTICVDGG 240
             G    +D G
Sbjct: 229 KNGAIWKLDLG 239

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  142 bits (359), Expect = 1e-41
 Identities = 42/256 (16%), Positives = 90/256 (35%), Gaps = 37/256 (14%)

Query: 14  SLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTKCF--KV 49
            L     ++TG ++G G                      +E+ L +   E   +    KV
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 50  TGSVCDASSRAEREKLMKQVSSLFN---GKLNILINNVGT--NYTTKPTVEYMAEDLSFL 104
             +  D  + A  ++L+  V  L      +  +LINN  T  + +          +++  
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 105 MSTNFESAYHLSQLAHPLLKASGA--GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
            + N  S   L+       + S      ++ +SS+C +       +Y A K A + L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 163 LACEWARDNIRINSVAPWFITTPLTEP---YLSDEKFLEEVKCRTPMERPGEPKEVSSLV 219
           LA E    ++R+ S AP  +   + +       D +   +++         +    +  +
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 220 AFLCMPAASYITGQTI 235
             L     ++ +G  +
Sbjct: 241 LGLL-QKDTFQSGAHV 255

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  140 bits (354), Expect = 3e-41
 Identities = 39/249 (15%), Positives = 79/249 (31%), Gaps = 37/249 (14%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           +     +VTG   GLG                       L +           +   V D
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGI---VAD 57

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +   + +           G   ++++  GT     P   Y AE +  +M +N  S   +
Sbjct: 58  LAHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFG-PVGVYTAEQIRRVMESNLVSTILV 115

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           +Q    L+   G G +  V S    +     ++Y A+K  M    ++L  E     +R+ 
Sbjct: 116 AQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLV 174

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF-LCMPAASYITGQT 234
           ++ P  I +   +                       P++ ++ +   L   ++ ++T   
Sbjct: 175 NLYPSGIRSEFWDNTD-----------HVDPSGFMTPEDAAAYMLDALEARSSCHVTDLF 223

Query: 235 ICVDGGFTV 243
           I  + G   
Sbjct: 224 IGRNEGHHH 232

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  127 bits (321), Expect = 1e-36
 Identities = 47/232 (20%), Positives = 79/232 (34%), Gaps = 44/232 (18%)

Query: 17  GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------CDASSRAEREKL 65
            M  L+ G +  LG+             +  +    V            D ++    +K+
Sbjct: 3   AMKILLIGASGTLGSAV----------KERLEKKAEVITAGRHSGDVTVDITNIDSIKKM 52

Query: 66  MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA 125
            +QV     GK++ +++  G+  T  P  E   E  +  +S+      +L  L    L  
Sbjct: 53  YEQV-----GKVDAIVSATGS-ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND 106

Query: 126 SGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP 185
            G+    L + +        G   A   GA+   AK+ A E  R  IRIN+V+P  +   
Sbjct: 107 KGS--FTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSPNVLEES 163

Query: 186 LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
             +     E FL       P  +     E S              TG++  V
Sbjct: 164 WDKLEPFFEGFLP-----VPAAKVARAFEKS---------VFGAQTGESYQV 201

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  129 bits (326), Expect = 5e-36
 Identities = 41/255 (16%), Positives = 79/255 (30%), Gaps = 43/255 (16%)

Query: 14  SLQGMTALVTGGTKGLG--------------------------NEAELNECLREWKTKCF 47
            L G T  +TG ++G+G                              +     E +    
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           K    + D     +    +++    F G ++IL+NN      T  T++   + L  +M+ 
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLT-NTLDTPTKRLDLMMNV 159

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLAC 165
           N    Y  S+   P LK S   +I+ +S    +          Y   K  M+     +A 
Sbjct: 160 NTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAE 219

Query: 166 EWARDNIRINSVAP-WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
           E+    I +N++ P   I T   +                   +  +   ++     +  
Sbjct: 220 EFK-GEIAVNALWPKTAIHTAAMDMLGGPG----------IESQCRKVDIIADAAYSIF- 267

Query: 225 PAASYITGQTICVDG 239
                 TG  +  + 
Sbjct: 268 QKPKSFTGNFVIDEN 282

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  126 bits (319), Expect = 1e-35
 Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 36/250 (14%)

Query: 14  SLQGMTALVTGGTKGLGNE----------------------AELNECLREWKTKCFKVTG 51
             Q   A++TG ++G+G                         ++++ +        +   
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 52  SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFES 111
              D +   + +  +K +   + G ++IL+N          ++    ++   +M  N  +
Sbjct: 64  LPLDITDCTKADTEIKDIHQKY-GAVDILVNAAA--MFMDGSLSEPVDNFRKIMEINVIA 120

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
            Y + +    ++K    G I  V+S         G IY +TK A+  LA++L  E A   
Sbjct: 121 QYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLG 180

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPAASYI 230
           IR+ ++ P ++ T +       +K     K     E   +P ++ + +  L  +     I
Sbjct: 181 IRVTTLCPGWVNTDMA------KKAGTPFK----DEEMIQPDDLLNTIRCLLNLSENVCI 230

Query: 231 TGQTICVDGG 240
                 +   
Sbjct: 231 KDIVFEMKKS 240

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  124 bits (313), Expect = 8e-35
 Identities = 36/243 (14%), Positives = 75/243 (30%), Gaps = 27/243 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           + +  T  V G    +G                   N  +L   + E +    ++     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           DA +  E    +    +     L + I NVG N    P +E        +      + + 
Sbjct: 64  DARNEDEVTAFLNAADAH--APLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFV 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
             + +  L+ A G G I    +   +   +    +A+ K  +  +A+++A E    NI +
Sbjct: 121 SGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHV 180

Query: 175 -NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL-CMPAASYITG 232
            + +    + T            +         +    P  V+     L   P +++   
Sbjct: 181 AHLIIDSGVDTAWVRERREQ---MFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWTFE 237

Query: 233 QTI 235
             I
Sbjct: 238 MEI 240

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  123 bits (310), Expect = 2e-34
 Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 39/243 (16%)

Query: 19  TALVTGGTKGLG--------------------------NEAELNECLREWKTKCFKVTGS 52
             L+TG  KG+G                            A+L +   E + +       
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             D S  A+  +L   +   + G ++ L+NN G         +   ED  + M+TN +  
Sbjct: 64  TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFG-ALSDLTEEDFDYTMNTNLKGT 121

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           + L+Q    L++   +G+I  ++SV    +    +IY  +K     L + +     + N+
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           RI  V P  + TP+    + DE                 P+++++ V    +  +  +  
Sbjct: 182 RITDVQPGAVYTPMWG-KVDDEM----------QALMMMPEDIAAPVVQAYLQPSRTVVE 230

Query: 233 QTI 235
           + I
Sbjct: 231 EII 233

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  123 bits (310), Expect = 4e-34
 Identities = 50/257 (19%), Positives = 92/257 (35%), Gaps = 40/257 (15%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
            +G +A+V+GG  GLG                      +      E   +         +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRA---EFVSTN 84

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNY----TTKPTVEYMAEDLSFLMSTNFES 111
            +S       ++  + L       ++ + G         +          +  +      
Sbjct: 85  VTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143

Query: 112 AYHLSQLAHPLLKASGA------GNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLA 164
            Y++++L    + A+        G ++L +S+ G     +G T YAA K  +  L    A
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-QIGQTAYAAAKAGVIGLTIAAA 202

Query: 165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-RPGEPKEVSSLVAFLC 223
            + +   IR+N++AP  + TP+ E     E+ L +     P   R G P E +   AFL 
Sbjct: 203 RDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260

Query: 224 MPAASYITGQTICVDGG 240
                YI G+ + +DG 
Sbjct: 261 --TNGYINGEVMRLDGA 275

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  115 bits (291), Expect = 2e-31
 Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 45/261 (17%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           S++G+ A++TGG  GLG                     +      ++    C     +  
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC---VFAPA 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTN-----YTTKPTVEYMAEDLSFLMSTNF 109
           D +S  + +  +      F G++++ +N  G       Y  K    +  ED   ++  N 
Sbjct: 66  DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124

Query: 110 ESAYHLSQLAHPLLKASGA------GNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKN 162
              +++ +L    +  +        G II  +SV       +G   Y+A+KG +  +   
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA-FEGQVGQAAYSASKGGIVGMTLP 183

Query: 163 LACEWARDNIRINSVAPWFITTPLTE--PYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLV 219
           +A + A   IR+ ++AP    TPL    P    EK    +  + P   R G+P E + LV
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPLLTSLP----EKVCNFLASQVPFPSRLGDPAEYAHLV 239

Query: 220 AFLCMPAASYITGQTICVDGG 240
             +      ++ G+ I +DG 
Sbjct: 240 QAII--ENPFLNGEVIRLDGA 258

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  115 bits (290), Expect = 2e-31
 Identities = 52/258 (20%), Positives = 95/258 (36%), Gaps = 43/258 (16%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+    +VTG + GLG                         E   E             D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAV---RFRNAD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNY---TTKPTVEYMAEDLSFLMSTNFESA 112
            ++ A+    +      F G ++ L+N  GT         +  +  +  +  ++ N    
Sbjct: 62  VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120

Query: 113 YHLSQLAHPLLKASGA------GNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLAC 165
           +++ +LA  ++           G I+  +S+       +G   YAA+KG +  L    A 
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAA-FDGQIGQAAYAASKGGVAALTLPAAR 179

Query: 166 EWARDNIRINSVAPWFITTPLTE--PYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFL 222
           E AR  IR+ ++AP    TP+    P    +   + +    P   R G  +E ++LV  +
Sbjct: 180 ELARFGIRVVTIAPGIFDTPMMAGMP----QDVQDALAASVPFPPRLGRAEEYAALVKHI 235

Query: 223 CMPAASYITGQTICVDGG 240
           C    + + G+ I +DG 
Sbjct: 236 C--ENTMLNGEVIRLDGA 251

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  114 bits (288), Expect = 3e-31
 Identities = 52/241 (21%), Positives = 89/241 (36%), Gaps = 34/241 (14%)

Query: 14  SLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCD 55
           SL+   A+VTG T G+G                  N   L             V     D
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAEI-----EGVEPIESD 56

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
                  E  + ++ +L    ++ L++       T         +    +  N      L
Sbjct: 57  IVKEVLEEGGVDKLKNL--DHVDTLVHAAAVARDT-TIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           S+   P L+A  +G +I ++S  G       TIYAA+K A+  LA     E A + IR++
Sbjct: 114 SRQLLPALRA-ASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL-CMPAASYITGQT 234
           +V+P    TP+       +  ++        E   EPKE+++ + F+      + IT   
Sbjct: 173 TVSPGPTNTPML------QGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGETTQITNVD 226

Query: 235 I 235
           +
Sbjct: 227 V 227

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  112 bits (283), Expect = 2e-30
 Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 51/261 (19%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           ++   A+VTGG  GLG                      ++   L +      +   +  D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD------RARFAAAD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA----EDLSFLMSTNFES 111
            +  A     +    ++  G L I++N  GT    +  +             ++  N   
Sbjct: 61  VTDEAAVASALDLAETM--GTLRIVVNCAGTGNAIR-VLSRDGVFSLAAFRKIVDINLVG 117

Query: 112 AYHLSQLA-------HPLLKASGA-GNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKN 162
           ++++ +LA        P+   +   G II  +SV       +G   Y+A+KG +  +   
Sbjct: 118 SFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA-FDGQIGQAAYSASKGGVVGMTLP 176

Query: 163 LACEWARDNIRINSVAPWFITTPLTE--PYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLV 219
           +A + A   IR+ ++AP    TPL    P    E+    +  + P   R G P E  +L 
Sbjct: 177 IARDLASHRIRVMTIAPGLFDTPLLASLP----EEARASLGKQVPHPSRLGNPDEYGALA 232

Query: 220 AFLCMPAASYITGQTICVDGG 240
             +       + G+ I +DG 
Sbjct: 233 VHII--ENPMLNGEVIRLDGA 251

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  111 bits (281), Expect = 7e-30
 Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 42/224 (18%)

Query: 1   MAQAYDHDRQDRW-----------SLQGMTALVTGGTKGLG------------------- 30
           M   + H  Q +             LQG   +VTG +KG+G                   
Sbjct: 1   MKHQHQHQHQHQHQQPLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR 60

Query: 31  NEAEL----NECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT 86
           ++  L    + CL         +             E+ + Q   L  G L++LI N  T
Sbjct: 61  SKETLQKVVSHCLELGAASAHYI---AGTMEDMTFAEQFVAQAGKLM-GGLDMLILNHIT 116

Query: 87  NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG 146
           N +           +   M  NF S   L+  A P+LK S  G+I++VSS+ G ++  + 
Sbjct: 117 NTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMV 174

Query: 147 TIYAATKGAMNQLAKNLACEWA--RDNIRINSVAPWFITTPLTE 188
             Y+A+K A++    ++  E++  R N+ I       I T    
Sbjct: 175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 218

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  109 bits (275), Expect = 4e-29
 Identities = 50/226 (22%), Positives = 82/226 (36%), Gaps = 36/226 (15%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           R S+ G   L+TG   G+G                   N+  L E   + K    KV   
Sbjct: 26  RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           V D S+R +     K+V +   G ++IL+NN G    T          +      N  + 
Sbjct: 86  VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAH 143

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR--- 169
           +  ++   P +  +  G+I+ V+S  G +S      Y ++K A     K L  E A    
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEV 215
             ++   + P F+ T   +               T +    EP+EV
Sbjct: 204 TGVKTTCLCPNFVNTGFIK------------NPSTSLGPTLEPEEV 237

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  108 bits (273), Expect = 4e-29
 Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 41/248 (16%)

Query: 19  TALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGSVCDASSRAEREK 64
           +ALVTGG  GLG                 +L     +       +     D +   +  +
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGED-------LIYVEGDVTREEDVRR 56

Query: 65  LMKQVSSLFNGKLNILINNVGTNYTTKPTV----EYMAEDLSFLMSTNFESAYHLSQLAH 120
            + +        L  +++  G     K  +     +  E    ++  N    +++ +LA 
Sbjct: 57  AVARAQEE--APLFAVVSAAGVGLAEK-ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 113

Query: 121 PLLKASGA------GNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDNIR 173
             ++ +        G I+  +SV       +G   YAA+KG +  L    A E A   IR
Sbjct: 114 WAMRENPPDAEGQRGVIVNTASVAAF-EGQIGQAAYAASKGGVVALTLPAARELAGWGIR 172

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITG 232
           + +VAP    TPL +  L  EK    +  + P   R G P+E ++LV  +       + G
Sbjct: 173 VVTVAPGLFDTPLLQG-LP-EKAKASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLNG 228

Query: 233 QTICVDGG 240
           + + +DG 
Sbjct: 229 EVVRLDGA 236

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  109 bits (274), Expect = 1e-28
 Identities = 52/264 (19%), Positives = 93/264 (35%), Gaps = 47/264 (17%)

Query: 14  SLQGMTALVTGGTKGLG-----------------------------NEAELNECLREWKT 44
            + G   +VTG   G+G                               +     + E   
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 45  KCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-EDLSF 103
              +      + +   +   L++     F G L++L+NN G        +   + E+   
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAG--IVRDRMIANTSEEEFDA 140

Query: 104 LMSTNFESAYHLSQLAHPLLKAS------GAGNIILVSSVCGVLSTNLG-TIYAATKGAM 156
           +++ + +  +   + A    +          G II  SS  G L  ++G   Y+A K  +
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG-LQGSVGQGNYSAAKAGI 199

Query: 157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVS 216
             L    A E  R  + +N++AP    T +TE       F E +  +        P+ VS
Sbjct: 200 ATLTLVGAAEMGRYGVTVNAIAP-SARTRMTE-----TVFAEMMATQDQDFDAMAPENVS 253

Query: 217 SLVAFLCMPAASYITGQTICVDGG 240
            LV +L    A  +TG+   V+GG
Sbjct: 254 PLVVWLGSAEARDVTGKVFEVEGG 277

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  108 bits (272), Expect = 2e-28
 Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 30/234 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
              G  A+VTGG  G+G                   ++  L + +   + + F   G VC
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D     E  +L  +   L  G ++++ +N G      P  +   +D  +++  +   + H
Sbjct: 88  DVRHLDEMVRLADEAFRLL-GGVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIH 145

Query: 115 LSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
             +   P L   G  G+I   +S  G++       Y   K  +  LA+ LA E   + I 
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205

Query: 174 INSVAPWFITTPLTE--------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLV 219
           ++ + P  + T L           Y                +      +V+ L 
Sbjct: 206 VSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT 259

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  108 bits (272), Expect = 3e-27
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 17/190 (8%)

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           V D ++  + +K+++     F G ++++INN G         +   +D   ++  +   A
Sbjct: 69  VADYNNVLDGDKIVETAVKNF-GTVHVIINNAG-ILRDASMKKMTEKDYKLVIDVHLNGA 126

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
           + +++ A P  +    G I+  SS  G L  N G   YA+ K A+   A+ LA E A+ N
Sbjct: 127 FAVTKAAWPYFQKQKYGRIVNTSSPAG-LYGNFGQANYASAKSALLGFAETLAKEGAKYN 185

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I+ N++AP    + +TE  +                    P++V+ LV +L       +T
Sbjct: 186 IKANAIAP-LARSRMTESIMPPPML-----------EKLGPEKVAPLVLYLSSAEN-ELT 232

Query: 232 GQTICVDGGF 241
           GQ   V  GF
Sbjct: 233 GQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  101 bits (254), Expect = 7e-25
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 22/193 (11%)

Query: 49  VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTN 108
               V   S     E ++K V   + G ++IL+NN G     +   +   ++   +   +
Sbjct: 374 DQHDVAKDS-----EAIIKNVIDKY-GTIDILVNNAG-ILRDRSFAKMSKQEWDSVQQVH 426

Query: 109 FESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEW 167
               ++LS+LA P       G II ++S  G+   N G   Y+++K  +  L+K +A E 
Sbjct: 427 LIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG-NFGQANYSSSKAGILGLSKTMAIEG 485

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A++NI++N VAP    T +T   + ++            +      +V+ L+ +L     
Sbjct: 486 AKNNIKVNIVAP-HAETAMTLSIMREQ-----------DKNLYHADQVAPLLVYLGTDDV 533

Query: 228 SYITGQTICVDGG 240
             +TG+T  + GG
Sbjct: 534 -PVTGETFEIGGG 545

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 99.6 bits (249), Expect = 7e-26
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 32/189 (16%)

Query: 18  MTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDASSRA 60
           M  L+TG T GLG                     L E  RE             D +   
Sbjct: 1   MRVLITGATGGLGGAFARALKGHDLLLSGRRAGALAELARE-----VGARALPADLADEL 55

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           E + L+++      G L++L++ VG         E   + +  +++ +  +A  +     
Sbjct: 56  EAKALLEEA-----GPLDLLVHAVGK-AGRASVREAGRDLVEEMLAAHLLTAAFVL---- 105

Query: 121 PLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW 180
              +       +   +    +       YAA KGA+    +    E  R+ + +  V   
Sbjct: 106 KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLP 165

Query: 181 FITTPLTEP 189
            + T L  P
Sbjct: 166 AVATGLWAP 174

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  100 bits (250), Expect = 4e-25
 Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 17/189 (8%)

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           V +  S    EKL+K     F G++++++NN G     +       ED   +   +   +
Sbjct: 70  VANYDSVEAGEKLVKTALDTF-GRIDVVVNNAG-ILRDRSFSRISDEDWDIIQRVHLRGS 127

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWARDN 171
           + +++ A   +K    G II+ +S  G+   N G   Y+A K  +  LA  L  E  ++N
Sbjct: 128 FQVTRAAWDHMKKQNYGRIIMTASASGIYG-NFGQANYSAAKLGLLGLANTLVIEGRKNN 186

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           I  N++AP   +  +TE  + ++                +P+ V+ LV +LC  +     
Sbjct: 187 IHCNTIAPNAGSR-MTETVMPEDLV-----------EALKPEYVAPLVLWLCHESC-EEN 233

Query: 232 GQTICVDGG 240
           G    V  G
Sbjct: 234 GGLFEVGAG 242

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 95.2 bits (237), Expect = 3e-23
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 29/202 (14%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGS 52
              G TA VTGG  G+G                    +  +++ L   + +    +V G 
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
             D +SR   +    +V + F G ++IL NN G N   +P  E   +D  +L+  N    
Sbjct: 65  QLDVASREGFKMAADEVEARF-GPVSILCNNAGVN-LFQPIEESSYDDWDWLLGVNLHGV 122

Query: 113 YHLSQLAHPLLKAS------GAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            +      P +           G+++  +S+   L+     IY  TK A+  L+++L   
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYS 182

Query: 167 WARDNIRINSVAPWFITTPLTE 188
             +  I ++ + P  + + +  
Sbjct: 183 LLKYEIGVSVLCPGLVKSYIYA 204

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 93.6 bits (233), Expect = 4e-23
 Identities = 41/199 (20%), Positives = 71/199 (35%), Gaps = 40/199 (20%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------------------CD 55
           + L+TG  +GLG    L + L         +  +                         D
Sbjct: 23  SILITGCNRGLG--LGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID 80

Query: 56  ASSRAEREKLMKQVSSLF-NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
             +    +KL+  +  +  +  LN+L NN G    +       +++L   + TN      
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 140

Query: 115 LSQLAHPLLKAS-----------GAGNIILVSSVCGVLSTNLG---TIYAATKGAMNQLA 160
           L++   PLLK +           G   II +SS+ G +  N       Y  +K A+N   
Sbjct: 141 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 200

Query: 161 KNLACEWARDNIRINSVAP 179
           K+L+ +     I   S+ P
Sbjct: 201 KSLSVDLYPQRIMCVSLHP 219

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 89.9 bits (224), Expect = 6e-22
 Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 17/190 (8%)

Query: 14  SLQGMTALVTGGTKGLGNE-AEL--------------NECLREWKTKCFKVTGSVCDASS 58
                  L+TG ++G+G   A L               + L+    +         D   
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVRE 61

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
             +  + +  +   F G+L+ L+NN G      P  E   E+   ++ TN   A+   + 
Sbjct: 62  EGDWARAVAAMEEAF-GELSALVNNAGVGVMK-PVHELTLEEWRLVLDTNLTGAFLGIRH 119

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
           A P L   G G I+ V S+ G      G  Y A+K  +  LA     +    N+R+ +V 
Sbjct: 120 AVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVL 179

Query: 179 PWFITTPLTE 188
           P  + T    
Sbjct: 180 PGSVDTGFAG 189

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 88.2 bits (219), Expect = 4e-21
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 49/204 (24%)

Query: 19  TALVTGGTKGLGNE------------------------AELNECLREWKTKCFKVTGSVC 54
           + +VTG  +G+G                           EL   +++ +           
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-IKDSRVHVLP-----L 58

Query: 55  DASSRAEREKLMKQVSSLFNG-KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
             +     +  + +V  +     L++LINN G   +     E     ++  +  N  S  
Sbjct: 59  TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118

Query: 114 HLSQLAHPLLKASGA-----------GNIILVSSVCGVLSTNLG-------TIYAATKGA 155
            L+Q   PLLK + +             +I +SS  G ++ N           Y  +K A
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178

Query: 156 MNQLAKNLACEWARDNIRINSVAP 179
           +N   + LA +   DN+ + +  P
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCP 202

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 87.6 bits (218), Expect = 4e-21
 Identities = 41/240 (17%), Positives = 83/240 (34%), Gaps = 45/240 (18%)

Query: 19  TALVTGGTKGLGNE----------------------AELNECLREWKTKCFKVTGSVCDA 56
             ++TG + GLG E                      + +  CL         V     D 
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN------NVGYRARDL 56

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
           +S  E E+L +Q+    +   + ++++ G+ Y      E   E +  L+  N  SA ++ 
Sbjct: 57  ASHQEVEQLFEQL----DSIPSTVVHSAGSGYF-GLLQEQDPEQIQTLIENNLSSAINVL 111

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
           +      K     N++++ S          + Y A K A+  L +++  E     ++I +
Sbjct: 112 RELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIA 170

Query: 177 VAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF-LCMPAASYITGQTI 235
           V P  + T           F E              ++ + ++   L      Y++  T+
Sbjct: 171 VYPGGMATE----------FWETSGKSLDTSSFMSAEDAALMIHGALANIGNGYVSDITV 220

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 85.3 bits (212), Expect = 3e-20
 Identities = 43/232 (18%), Positives = 81/232 (34%), Gaps = 36/232 (15%)

Query: 16  QGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCD 55
           +   A++TG ++G+G                   +   L +   E   +   +V     D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S     E+  K+V   F G +++++ N G  Y      E   E+   ++  N    +  
Sbjct: 61  VSKAESVEEFSKKVLERF-GDVDVVVANAGLGYFK-RLEELSEEEFHEMIEVNLLGVWRT 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +     LK +G   ++  S V   L    G  Y +TK A   L +    E    ++R  
Sbjct: 119 LKAFLDSLKRTGGLALVTTSDVSARLIPY-GGGYVSTKWAARALVRTFQIE--NPDVRFF 175

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF-LCMPA 226
            + P  + T          K  +  +     +   +P E++  V   L +P 
Sbjct: 176 ELRPGAVDTY-----FGGSKPGKPKE-----KGYLKPDEIAEAVRCLLKLPK 217

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 87.5 bits (217), Expect = 6e-20
 Identities = 61/268 (22%), Positives = 102/268 (38%), Gaps = 54/268 (20%)

Query: 14  SLQGMTALVTGGTKGLG----------------------------NEAELNECLREWKT- 44
              G  A+VTG   GLG                            ++   +  + E +  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 45  --KCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS 102
             +      SV D        K+++     F G+++IL+NN G     +  V+   +D +
Sbjct: 76  GGEAVADYNSVIDG------AKVIETAIKAF-GRVDILVNNAG-ILRDRSLVKTSEQDWN 127

Query: 103 FLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAK 161
            +   + + ++  +Q A P +K    G II+ SS  G+   N G   Y A K  +  LA 
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG-NFGQVNYTAAKMGLIGLAN 186

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
            +A E AR+N+  N + P    + +TE  L D  F              +PK ++ +VA+
Sbjct: 187 TVAIEGARNNVLCNVIVP-TAASRMTEGILPDILF-----------NELKPKLIAPVVAY 234

Query: 222 LCMPAASYITGQTICVDGGFTVNGFFFR 249
           LC  +     G  I    G+       R
Sbjct: 235 LCHESCE-DNGSYIESAAGWATKLHMVR 261

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 82.0 bits (203), Expect = 1e-18
 Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 25/199 (12%)

Query: 14  SLQGMTALVTGGTKGLG------------NEAEL------NECLREWKTKC------FKV 49
            L   T L+TG + G+G             + +L       E L E K          KV
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
             +  D +   + +  ++ +   F   ++IL+NN G    +    +   ED+  +  TN 
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNV 148

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            +  +++Q   P+ +A  +G+I+ + S+ G  +   G+IY A+K A+     +L  E   
Sbjct: 149 TALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELIN 208

Query: 170 DNIRINSVAPWFITTPLTE 188
             IR+  +AP  + T  + 
Sbjct: 209 TKIRVILIAPGLVETEFSL 227

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 81.0 bits (201), Expect = 2e-18
 Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 17/178 (9%)

Query: 18  MTALVTGGTKGLGNE-----AELN----------ECLREWKTKC-FKVTGSVCDASSRAE 61
           M  LVTG T G G        +            E L+E K +    +  +  D  +RA 
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAA 60

Query: 62  REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP 121
            E+++  + + +   ++IL+NN G     +P  +   ED   ++ TN +   ++++   P
Sbjct: 61  IEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119

Query: 122 LLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            +     G+II + S  G      G +Y ATK  + Q + NL  +     +R+  + P
Sbjct: 120 GMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 79.6 bits (197), Expect = 6e-18
 Identities = 47/194 (24%), Positives = 72/194 (37%), Gaps = 20/194 (10%)

Query: 14  SLQGMTALVTGGTKGLGNE-----AELN----------ECLREWKTKC---FKVTGSVCD 55
           S    T  +TG T G G       AE            E L+    +     +V     D
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLD 77

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
              RA     +  +   F   L  LINN G    T P      +D   ++ TN +   + 
Sbjct: 78  VRDRAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYS 136

Query: 116 SQLAHPLLKASGAGN-IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           ++L  P L A GAG  I+ + SV G        +Y  TK  + Q + NL C+     +R+
Sbjct: 137 TRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV 196

Query: 175 NSVAPWFITTPLTE 188
            ++ P    +  + 
Sbjct: 197 TNLEPGLCESEFSL 210

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 77.6 bits (192), Expect = 3e-17
 Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 19/190 (10%)

Query: 14  SLQGMTALVTGGTKGLGNE-AEL--------------NECLREWKTKCFKVTGSVCDASS 58
                  ++TG + G+G   A                 E L+           +  D + 
Sbjct: 13  GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--NTLCAQVDVTD 70

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
           +   +  + +   ++ G  + ++NN G            A +   +   N     +  Q 
Sbjct: 71  KYTFDTAITRAEKIY-GPADAIVNNAGMMLLG-QIDTQEANEWQRMFDVNVLGLLNGMQA 128

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
               +KA   G II +SS+ G  +      Y  TK A++ +++N+  E A  N+R+ ++A
Sbjct: 129 VLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIA 188

Query: 179 PWFITTPLTE 188
           P  + T L  
Sbjct: 189 PSAVKTELLS 198

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 76.4 bits (189), Expect = 6e-17
 Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 22/194 (11%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           +LQG  AL+TG + G+G                      +L     E      KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D + R   +  +        G L+IL+NN G      P  +    D + ++ TN     +
Sbjct: 64  DVADRQGVDAAVASTVEAL-GGLDILVNNAGIMLLG-PVEDADTTDWTRMIDTNLLGLMY 121

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           +++ A P L     G ++ +SS+ G ++     +Y ATK  +N  ++ L  E     +R+
Sbjct: 122 MTRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRV 180

Query: 175 NSVAPWFITTPLTE 188
             + P    T L  
Sbjct: 181 VVIEPGTTDTELRG 194

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 76.8 bits (190), Expect = 6e-17
 Identities = 36/193 (18%), Positives = 71/193 (36%), Gaps = 23/193 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           +     L+TG + G+G                    +A +     E +         V D
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + R       +     + G++++L+NN G    + P      ++   ++  N +     
Sbjct: 62  VTDRHSVAAFAQAAVDTW-GRIDVLVNNAGVMPLS-PLAAVKVDEWERMIDVNIKGVLWG 119

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
                P+++A  +G II + S+  +       +Y ATK A+  ++  L  E    NIR+ 
Sbjct: 120 IGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVT 177

Query: 176 SVAPWFITTPLTE 188
            V P  + + L  
Sbjct: 178 CVNPGVVESELAG 190

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 74.6 bits (184), Expect = 4e-16
 Identities = 44/207 (21%), Positives = 78/207 (37%), Gaps = 35/207 (16%)

Query: 11  DRWSLQGMTALVTGGTKGLGNEA-----------------------ELNECLREWKTKCF 47
           +RW  +   ALVTG + G+G  A                       EL    +       
Sbjct: 28  ERW--RDRLALVTGASGGIG-AAVARALVQQGLKVVGCARTVGNIEELAAECKS-AGYPG 83

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
            +    CD S+  +   +   + S     ++I INN G        +         + + 
Sbjct: 84  TLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPD-TLLSGSTSGWKDMFNV 141

Query: 108 NFESAYHLSQLAHPLLKASGA--GNIILVSSVCG--VLSTNLGTIYAATKGAMNQLAKNL 163
           N  +    ++ A+  +K      G+II ++S+ G  VL  ++   Y+ATK A+  L + L
Sbjct: 142 NVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGL 201

Query: 164 ACEW--ARDNIRINSVAPWFITTPLTE 188
             E   A+ +IR   ++P  + T    
Sbjct: 202 RQELREAQTHIRATCISPGVVETQFAF 228

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 71.5 bits (176), Expect = 7e-15
 Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 26/191 (13%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
             LVTG + G G                       L++ +  +  +   ++    D +  
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDG 63

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAYHLSQL 118
              + +   V + + G++++L+NN G   T     E     +L  L   +      L++ 
Sbjct: 64  ERIDVVAADVLARY-GRVDVLVNNAG--RTQVGAFEETTERELRDLFELHVFGPARLTRA 120

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
             P ++  G+G+++ +SS  G LS    + Y+ATK A+ QL++ LA E A   I++  V 
Sbjct: 121 LLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVE 180

Query: 179 PWFITTPLTEP 189
           P    T L   
Sbjct: 181 PGAFRTNLFGK 191

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 71.2 bits (175), Expect = 8e-15
 Identities = 41/242 (16%), Positives = 71/242 (29%), Gaps = 69/242 (28%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           S     ALVTGG KG+G                    +       +++ + +        
Sbjct: 1   SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D         L   +   + G L++L+NN G  +       +        M TNF    
Sbjct: 61  LDIDDLQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPF-HIQAEVTMKTNFFGTR 118

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--------------------------- 146
            +     PL+K    G ++ VSS+  V +                               
Sbjct: 119 DVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176

Query: 147 --------------TIYAATKGAMN----QLAKNLACEWARDNIRINSVAPWFITTPLTE 188
                         + Y  TK  +       A+ L+ +   D I +N+  P ++ T +  
Sbjct: 177 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236

Query: 189 PY 190
           P 
Sbjct: 237 PK 238

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 71.7 bits (176), Expect = 9e-15
 Identities = 34/195 (17%), Positives = 76/195 (38%), Gaps = 29/195 (14%)

Query: 19  TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ---------- 68
             L+TG + G+G    L   L    ++ FKV  ++ D  ++    +  +           
Sbjct: 4   VVLITGCSSGIG--LHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 69  --------------VSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAY 113
                            +  G++++L+ N G        +E +  + ++ ++  N     
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVDVLVCNAG--LGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            + Q   P +K  G+G +++  SV G++      +Y A+K A+  L ++LA       + 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 174 INSVAPWFITTPLTE 188
           ++ +    + T   E
Sbjct: 180 LSLIECGPVHTAFME 194

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 29/192 (15%)

Query: 19  TALVTGGTKGLG------------------------NEAELNECLREWKTKCFKVTGSVC 54
             L+TG + G G                        N + +       +     +     
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAY 113
           D  S+   ++ + Q+     G++++LI+N G  +      E    E  + L   N  S  
Sbjct: 67  DVQSQVSVDRAIDQIIGED-GRIDVLIHNAG--HMVFGPAEAFTPEQFAELYDINVLSTQ 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTN-LGTIYAATKGAMNQLAKNLACEWARDNI 172
            +++ A P ++    G +I +SS      T      Y A K AM+ +A   A E +R  I
Sbjct: 124 RVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGI 183

Query: 173 RINSVAPWFITT 184
             + + P   T+
Sbjct: 184 ETSIIVPGAFTS 195

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 64.6 bits (157), Expect = 2e-12
 Identities = 45/267 (16%), Positives = 78/267 (29%), Gaps = 96/267 (35%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF-KVTGSV 53
             +   A+VTGG KG+G                   +  + +E + + K      V    
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 54  CDASSRAE-REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMA-------------- 98
            D +        L   + + F GKL+IL+NN G    +     + A              
Sbjct: 69  LDVTDPIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127

Query: 99  ---------------EDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST 143
                          E     +  N+     ++++  PLL+ S +  I+ VSS  G L  
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKY 187

Query: 144 -------------------------------------------NLGTIYAATKGAMNQLA 160
                                                      + G  Y  +K  +N   
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247

Query: 161 KNLACEWARDNIRINSVAPWFITTPLT 187
           + LA +      ++N V P  + T + 
Sbjct: 248 RVLANKI--PKFQVNCVCPGLVKTEMN 272

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 63.0 bits (154), Expect = 7e-12
 Identities = 43/217 (19%), Positives = 89/217 (41%), Gaps = 48/217 (22%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST---N 108
           CD  S  E + L  ++  ++   L+ +++++   +  +       + L   F+       
Sbjct: 82  CDVISDQEIKDLFVELGKVW-DGLDAIVHSIA--FAPR-------DQLEGNFIDCVTREG 131

Query: 109 FE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLGTIY 149
           F      SAY    L++    ++K     +++ ++           +  GV         
Sbjct: 132 FSIAHDISAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGV--------- 181

Query: 150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMER 208
              K ++    +  A     D I++N+V+   I T L    +S+ +K L+     +P+++
Sbjct: 182 --AKASLEATVRYTALALGEDGIKVNAVSAGPIKT-LAASGISNFKKMLDYNAMVSPLKK 238

Query: 209 PGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
             +  EV + VAFLC   A+ ITG+ + VD G+    
Sbjct: 239 NVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCVS 275

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 77/280 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           L+G  AL+TG    + NE               A+L        L +   +  K  GS  
Sbjct: 19  LEGKRALITG----VANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDL 74

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
              CD S   + + L K +   + G L+I+++++   Y  K       E+     + ++ 
Sbjct: 75  VVKCDVSLDEDIKNLKKFLEENW-GSLDIIVHSIA--YAPK-------EEFKGGVIDTSR 124

Query: 108 -NFE-----SAY---HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN- 157
             F+     S Y    L++   PL++      + L             + Y A K   + 
Sbjct: 125 EGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTL-------------SYYGAEKVVPHY 171

Query: 158 ---QLAKN--------LACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTP 205
               +AK         LA + A+   RIN+++   + T L    ++     +E      P
Sbjct: 172 NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKT-LAAYSITGFHLLMEHTTKVNP 230

Query: 206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
             +P   ++V     FLC   A  ITG+ + VD G+ + G
Sbjct: 231 FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIMG 270

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 60/279 (21%), Positives = 105/279 (37%), Gaps = 76/279 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           L G  ALV G    + N+               AE+      E LR    K  +  G   
Sbjct: 6   LSGKKALVMG----VTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
               D +   E + L   V   F G L+ L++ +   +  +       E +   ++ +  
Sbjct: 62  LFRADVTQDEELDALFAGVKEAF-GGLDYLVHAIA--FAPR-------EAMEGRYIDTRR 111

Query: 108 -NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLGT 147
            ++      SAY    +++ A PLL+  G   I+ ++           +V  +       
Sbjct: 112 QDWLLALEVSAYSLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAI------- 162

Query: 148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPM 206
                K A+    + LA E     +R+N+++   + T +    +    K  + V    P+
Sbjct: 163 ----AKAALEASVRYLAYELGPKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQTAPL 217

Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
            R    +EV +L  FL  P AS ITG+ + VD G+ + G
Sbjct: 218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 48/216 (22%)

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST--NF 109
           CD ++ AE E     +     G ++ + + +   +  K       E+L   +L +    F
Sbjct: 66  CDVTNDAEIETCFASIKEQV-GVIHGIAHCIA--FANK-------EELVGEYLNTNRDGF 115

Query: 110 E-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLGTIYA 150
                 S+Y    + + A P++   G+  I+ ++           +V GV          
Sbjct: 116 LLAHNISSYSLTAVVKAARPMMTEGGS--IVTLTYLGGELVMPNYNVMGV---------- 163

Query: 151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERP 209
             K +++   K LA +  ++NIR+NS++   I T L+   +SD    L++++ R P+ R 
Sbjct: 164 -AKASLDASVKYLAADLGKENIRVNSISAGPIRT-LSAKGISDFNSILKDIEERAPLRRT 221

Query: 210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
             P+EV    AFL    +  ITG+ + VD GF +  
Sbjct: 222 TTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITA 257

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 58/280 (20%), Positives = 107/280 (38%), Gaps = 77/280 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           L G   L+TG    L +                AEL      +  ++  T+     GS  
Sbjct: 12  LDGKRILLTG----LLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSEL 67

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
              CD +  A+ + L   + + +   L+ L++++G  +  +       E ++  FL    
Sbjct: 68  VFPCDVADDAQIDALFASLKTHW-DSLDGLVHSIG--FAPR-------EAIAGDFLDGLT 117

Query: 108 --NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLG 146
             NF      SAY    L++ A P+L    +  ++ +S           +  G+      
Sbjct: 118 RENFRIAHDISAYSFPALAKAALPMLSDDAS--LLTLSYLGAERAIPNYNTMGL------ 169

Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTP 205
                 K A+    + LA       +R+N+++   I T L    +    K L+ V+  +P
Sbjct: 170 -----AKAALEASVRYLAVSLGAKGVRVNAISAGPIKT-LAASGIKSFGKILDFVESNSP 223

Query: 206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
           ++R    ++V +  AFL    AS +T + + VD GF    
Sbjct: 224 LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVV 263

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 57/279 (20%), Positives = 107/279 (38%), Gaps = 76/279 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           LQG   L+ G    + N                AEL      + L++      +  G+  
Sbjct: 29  LQGKRGLILG----VANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFV 84

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
              CD +  A  + + + +   + GKL+ L++ +G  ++ K       ++L+  ++ ++ 
Sbjct: 85  AGHCDVADAASIDAVFETLEKKW-GKLDFLVHAIG--FSDK-------DELTGRYIDTSE 134

Query: 108 -NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLGT 147
            NF      S Y    +S+ A  L+   G+  I+ ++           +V GV       
Sbjct: 135 ANFTNTMLISVYSLTAVSRRAEKLMADGGS--ILTLTYYGAEKVMPNYNVMGV------- 185

Query: 148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPM 206
                K A+    K LA +    NIR+N+++   I T L    + D    L+  +   P+
Sbjct: 186 ----AKAALEASVKYLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPL 240

Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
            R     EV  +  +     +  +TG+    D G+ V G
Sbjct: 241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIG 279

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 55/279 (19%), Positives = 106/279 (37%), Gaps = 76/279 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           ++G   ++ G    + N+               AE+     +E  ++      +  G   
Sbjct: 28  MEGKKGVIIG----VANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKL 83

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
              CD S     + + K ++  + G L+ +++ V   ++ K        +L   ++ ++ 
Sbjct: 84  TVPCDVSDAESVDNMFKVLAEEW-GSLDFVVHAVA--FSDK-------NELKGRYVDTSL 133

Query: 108 -NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLGT 147
            NF      S Y   +++  A PL+   G+  I+ +S           +V GV       
Sbjct: 134 GNFLTSMHISCYSFTYIASKAEPLMTNGGS--ILTLSYYGAEKVVPHYNVMGV------- 184

Query: 148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPM 206
                K A+    K LA +  +  IR+N+++   + T L    +SD    L   K  +P+
Sbjct: 185 ----CKAALEASVKYLAVDLGKQQIRVNAISAGPVRT-LASSGISDFHYILTWNKYNSPL 239

Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
            R     +V     +L        TG+T+ VD G+ V G
Sbjct: 240 RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVG 278

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 55/279 (19%), Positives = 99/279 (35%), Gaps = 76/279 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           L+G   L+ G    + N                A L     NE L +      +   S  
Sbjct: 4   LKGKKGLIVG----VANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPY 59

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
               D S     + L   V     G L+ ++++V   +  K       E L    L ++ 
Sbjct: 60  VYELDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVA--FAPK-------EALEGSLLETSK 109

Query: 108 -NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLGT 147
             F      S Y    L+    PLL    +  ++ +S           +V G+       
Sbjct: 110 SAFNTAMEISVYSLIELTNTLKPLLNNGAS--VLTLSYLGSTKYMAHYNVMGL------- 160

Query: 148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPM 206
                K A+    + LA +  + +IR+N+++   I T L    ++D    L+  +   P+
Sbjct: 161 ----AKAALESAVRYLAVDLGKHHIRVNALSAGPIRT-LASSGIADFRMILKWNEINAPL 215

Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
            +    +EV +   +L    +S ++G+   VD G+ V G
Sbjct: 216 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMG 254

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 52/280 (18%), Positives = 109/280 (38%), Gaps = 77/280 (27%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           L G   LVTG    + ++               AEL     N+ L+    +     GS  
Sbjct: 7   LSGKRILVTG----VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 62

Query: 54  ---CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMST- 107
              CD +  A  + +  ++  ++  K +  ++++G  +          + L   ++ +  
Sbjct: 63  VLQCDVAEDASIDTMFAELGKVW-PKFDGFVHSIG--FAPG-------DQLDGDYVNAVT 112

Query: 108 --NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLG 146
              F+     S+Y    +++    +L    A  ++ +S           +V G+      
Sbjct: 113 REGFKIAHDISSYSFVAMAKACRSMLNPGSA--LLTLSYLGAERAIPNYNVMGL------ 164

Query: 147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTP 205
                 K ++    + +A     + +R+N+++   I T L    + D  K L   +  TP
Sbjct: 165 -----AKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTP 218

Query: 206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
           + R    ++V +  AFLC   ++ I+G+ + VDGGF++  
Sbjct: 219 IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAA 258

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 57/277 (20%), Positives = 103/277 (37%), Gaps = 78/277 (28%)

Query: 15  LQGMTALVTGGTKGLGNE---------------AEL-----NECLREWKTKCFKVTGSV- 53
           L+  T ++ G    + N+               A+L      E  R+   K  +      
Sbjct: 30  LENKTYVIMG----IANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE 85

Query: 54  -----CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMS 106
                 D  S  E     +Q+     G ++ + +++   +          EDL   F  +
Sbjct: 86  AHLYQIDVQSDEEVINGFEQIGKDV-GNIDGVYHSIA--FANM-------EDLRGRFSET 135

Query: 107 T--NFE-----SAY---HLSQLAHPLLKASGAGNIILVS-----------SVCGVLSTNL 145
           +   F      S+Y    ++  A  L+   G+  I+  +           +V GV     
Sbjct: 136 SREGFLLAQDISSYSLTIVAHEAKKLMPEGGS--IVATTYLGGEFAVQNYNVMGV----- 188

Query: 146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRT 204
                  K ++    K LA +   DNIR+N+++   I T L+   +      L+E++ R 
Sbjct: 189 ------AKASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAKGVGGFNTILKEIEERA 241

Query: 205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF 241
           P++R  +  EV    A+L    +S +TG+ I VD GF
Sbjct: 242 PLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 20/210 (9%)

Query: 46  CFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLSFL 104
                      SS    ++  + V   F G ++IL++++      +KP +E   +     
Sbjct: 90  EDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAA 148

Query: 105 MSTNFESAY---HLSQLAHPLLKASGAGNIILVS---SVCGVLSTNL--GTIYAATKGAM 156
           +S    S+Y    L     P++   GA   I ++   S   +        +  AA +   
Sbjct: 149 ISA---SSYSFVSLLSHFLPIMNPGGA--SISLTYIASERIIPGYGGGMSSAKAALESDT 203

Query: 157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEVKCRTPMERPGEPKEV 215
             LA        + NIR+N+++   + +      +   +  +E      P+++     EV
Sbjct: 204 RVLAFEAG---RKQNIRVNTISAGPLGS-RAAKAIGFIDTMIEYSYNNAPIQKTLTADEV 259

Query: 216 SSLVAFLCMPAASYITGQTICVDGGFTVNG 245
            +  AFL  P AS ITG TI VD G    G
Sbjct: 260 GNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 30/214 (14%)

Query: 54  CDASSRAEREKLMKQ-VSSLFN------GKLNILINNVG-TNYTTKPTVEYMAEDLSFLM 105
            D         +    +  +        G ++IL++++      TKP +E   +      
Sbjct: 91  QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAAS 150

Query: 106 STNFESAY---HLSQLAHPLLKASGAGNIILVSSVCGVLS----TNL-GTIYAATKGAMN 157
           S    SAY    L Q   P++   G+   + +S +              +  AA +    
Sbjct: 151 SN---SAYSFVSLLQHFGPIMNEGGS--AVTLSYLAAERVVPGYGGGMSSAKAALESDTR 205

Query: 158 QLAKNLACEWARDNIRINSVAPWFITT------PLTEPYLSDEKFLEEVKCRTPMERPGE 211
            LA        +  +R+N+++   + +        +      +  ++      P+ R   
Sbjct: 206 TLAWEAG---QKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLH 262

Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
             +V     FL  P A  ++G T+ VD G    G
Sbjct: 263 SDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG 296

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 40/214 (18%), Positives = 80/214 (37%), Gaps = 30/214 (14%)

Query: 54  CDASSRAEREKLMKQ-VSSLFN------GKLNILINNVG-TNYTTKPTVEYMAEDLSFLM 105
            + SS      +    +S +        G+++IL++++      TKP ++   +     +
Sbjct: 104 PEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163

Query: 106 STNFESAY---HLSQLAHPLLKASGAGNIILVS---SVCGVLSTNL--GTIYAATKGAMN 157
           S+   S+Y    L Q   PL+K  G+   + +S   S   +        +  AA +    
Sbjct: 164 SS---SSYSFVSLLQHFLPLMKEGGS--ALALSYIASEKVIPGYGGGMSSAKAALESDCR 218

Query: 158 QLAKNLACEWARDNIRINSVAPWFITT------PLTEPYLSDEKFLEEVKCRTPMERPGE 211
            LA           +R+N ++   + +               +  ++  +   P+++  E
Sbjct: 219 TLAFEAG---RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELE 275

Query: 212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
             +V     FL  P A  +TG T+ VD G    G
Sbjct: 276 SDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG 309

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 64/231 (27%)

Query: 54  CDASSRAEREKLMKQVSSLF--NGKLNILINNVGTNYTTKPTVEYMAEDLS--FLMSTNF 109
            D  +      L  +V+       KL+ +++++G  +  +         +         +
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG--FMPQ-------TGMGINPFFDAPY 113

Query: 110 E--------SAY---HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ 158
                    SAY    +++   P++   G+  I+ +              +  ++ AM  
Sbjct: 114 ADVSKGIHISAYSYASMAKALLPIMNPGGS--IVGMD-------------FDPSR-AMPA 157

Query: 159 -----LAKN--------LACEWARDNIRINSVAPWFITT----------PLTEPYLSDEK 195
                +AK+        +A E  +  +R N VA   I T             E     + 
Sbjct: 158 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQL 217

Query: 196 FLEEVKCRTPMER-PGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
             E    R P+     +   V+  V  L        TG  I  DGG     
Sbjct: 218 LEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQL 268

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 48.4 bits (115), Expect = 6e-07
 Identities = 20/92 (21%), Positives = 33/92 (35%)

Query: 155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKE 214
             N             NI  NS          ++ Y   +  +E  +   P+ +     +
Sbjct: 236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTD 295

Query: 215 VSSLVAFLCMPAASYITGQTICVDGGFTVNGF 246
           + S+ +FL    +  ITGQTI VD G  +   
Sbjct: 296 IGSVASFLLSRESRAITGQTIYVDNGLNIMFL 327

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	251
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.93
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.92
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.91
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.9
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.88
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.88
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.87
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.86
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.86
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.86
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.85
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.85
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.85
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.85
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.84
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.84
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.84
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.84
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.84
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.84
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.83
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.83
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.83
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.83
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.83
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.83
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.83
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.82
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.82
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.81
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.81
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.81
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.8
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.8
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.8
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.79
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.79
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.79
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.78
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.78
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.78
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.78
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.77
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.77
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.77
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.77
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.76
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.76
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.76
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.76
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.76
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.75
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.74
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.74
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.74
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.74
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.74
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.73
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.73
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.72
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.72
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.72
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.69
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.69
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.69
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.68
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.67
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.65
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.65
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.61
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.59
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.55
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.52
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.5
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.45
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.45
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.43
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.43
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.36
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.31
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.26
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.18
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.12
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.78
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.59
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.51
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.27
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.51
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.46
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.34
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.29
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.28
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.17
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.15
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.08
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.07
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.05
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	96.97
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	96.91
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.9
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.84
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.79
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.76
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.67
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.65
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.63
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.6
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.58
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.57
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.5
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.49
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.34
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.31
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.28
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.24
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.13
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.11
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.08
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.05
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	95.96
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	95.94
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	95.9
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	95.88
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.66
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	95.66
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.64
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.43
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	95.15
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.11
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.07
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.02
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.97
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	94.95
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	94.91
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	94.85
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	94.76
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	94.63
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.62
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	94.51
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	94.42
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	94.12
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	94.04
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	93.9
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	93.87
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	93.31
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	93.26
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	93.24
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	93.13
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	92.99
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	92.94
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	92.33
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	92.21
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	92.2
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	92.12
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	92.1
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	91.87
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	91.84
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	91.71
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	91.62
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	91.48
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	91.3
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	91.27
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	91.21
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	91.19
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	91.18
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	91.17
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	91.11
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	91.1
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	90.85
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	90.8
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	90.72
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	90.71
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	90.33
3tl2_A	315	Malate dehydrogenase; center for structural genomi	90.21
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	89.8
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	89.61
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	89.55
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	89.5
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	89.5
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	89.3
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	88.68
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	88.63
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	88.59
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	88.38
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	88.14
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	87.97
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	87.9
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	87.85
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	87.83
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	87.74
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	87.72
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	87.7
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	87.7
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	87.58
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	87.56
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	86.94
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	86.61
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	86.55
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	86.38
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	86.37
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	86.17
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	85.88
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	85.69
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	85.49
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	85.22
3c85_A	183	Putative glutathione-regulated potassium-efflux S	85.19
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	85.14
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	84.89
3la6_A	286	Tyrosine-protein kinase WZC; P-loop protein, nucle	84.79
4dzz_A	206	Plasmid partitioning protein PARF; deviant walker	84.38
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	84.33
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	83.95
3l07_A	285	Bifunctional protein fold; structural genomics, ID	83.5
3bfv_A	271	CAPA1, CAPB2, membrane protein CAPA1, protein tyro	83.01
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	82.92
3q9l_A	260	Septum site-determining protein MIND; ATPase, bact	82.74
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	82.67
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	82.67
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	82.01
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	81.94
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	81.59
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	81.57
1id1_A	153	Putative potassium channel protein; RCK domain, E.	81.44
2woo_A	329	ATPase GET3; tail-anchored, membrane protein, targ	80.92
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	80.54
3cio_A	299	ETK, tyrosine-protein kinase ETK; WZC, escherichia	80.48
1zu4_A	320	FTSY; GTPase, signal recognition particle, SRP, re	80.22
3kuu_A	174	Phosphoribosylaminoimidazole carboxylase catalyti	80.11
3zq6_A	324	Putative arsenical pump-driving ATPase; tail-ancho	80.08

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=6.8e-58  Score=369.48  Aligned_cols=230  Identities=26%  Similarity=0.413  Sum_probs=212.1

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++|+||++|||||++|||                   +++.++++.+++++.+.++.++.+|++|+++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999                   6788899999999989999999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       |+||+||||||+.....++.+.++++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.+....|++||
T Consensus        83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence             8999999999987656789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-HHHHHH-HhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEE-VKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|+.+|+|++|.|++++|||||+|+||+++|||....... +..... .....|.+|+++|+|||++++||+|++++|+|
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iT  241 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVN  241 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            9999999999999999999999999999999998665443 332333 33446789999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      ||.|.||||+++
T Consensus       242 G~~i~VDGG~t~  253 (254)
T 4fn4_A          242 GDAVVVDGGLTV  253 (254)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEeCCCccc
Confidence            999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.9e-58  Score=372.86  Aligned_cols=232  Identities=33%  Similarity=0.505  Sum_probs=218.7

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ..+++|+||++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.
T Consensus         2 s~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            2 TALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             -CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            346789999999999999999                   6788889999999989999999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      ++| |++|+||||||+.. ..++.+.++++|++++++|+.++++++|+++|+|+++ +.|+||++||.++..+.+....|
T Consensus        82 ~~~-G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (255)
T 4g81_D           82 AEG-IHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPY  159 (255)
T ss_dssp             HTT-CCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHC-CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhH
Confidence            999 89999999999976 7889999999999999999999999999999999764 66999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+.+|+|++|.|++++|||||+|+||+++|||.+....+++..+.+..+.|++|+++|+|||+.++||+|++++|
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  239 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999998877777888888888999999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +|||.|.||||++.
T Consensus       240 iTG~~i~VDGG~~A  253 (255)
T 4g81_D          240 INGQIIYVDGGWLA  253 (255)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECCCeEe
Confidence            99999999999864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.2e-57  Score=361.36  Aligned_cols=228  Identities=28%  Similarity=0.398  Sum_probs=206.0

Q ss_pred             CcccCCCCCEEEEecCCCCcC-----------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+.++|+||++|||||++|||                 +....++..+.+.+.+.++.++.+|++|+++++++++     
T Consensus         2 ~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            2 KNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             -CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred             cCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence            345789999999999999999                 1111245566777778889999999999999888774     


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|+||||||+.. ..++.+.++++|++++++|+.++|+++|+++|+|++++ .|+||++||.++..+.+....|++
T Consensus        77 ~-g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~a  154 (247)
T 4hp8_A           77 D-AGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTA  154 (247)
T ss_dssp             T-TCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             h-CCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHH
Confidence            3 79999999999986 78899999999999999999999999999999998764 699999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|||.+....++...+.+.+++|++|+++|+|||..++||+|++++|+|
T Consensus       155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iT  234 (247)
T 4hp8_A          155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVH  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999999887777777778888999999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||.|.||||++.+
T Consensus       235 G~~i~VDGG~~Ar  247 (247)
T 4hp8_A          235 GAILNVDGGWLAR  247 (247)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCeEEECcccccC
Confidence            9999999999853

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.4e-54  Score=344.34  Aligned_cols=215  Identities=34%  Similarity=0.586  Sum_probs=193.8

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ++||++|||||++|||     .++++.+.++|.                  ++..+.+|++|+++++++++    ++ ++
T Consensus         9 f~GK~alVTGas~GIG-----~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----~~-g~   78 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIG-----AAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFE----AL-PR   78 (242)
T ss_dssp             TTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHH----HC-SC
T ss_pred             CCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHH----hc-CC
Confidence            5899999999999999     777777776654                  45567899999999988875    46 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||+..   ++.+.+.++|++++++|+.++++++|+++|+|++++ |+||++||+++..+.++...|++||+|+
T Consensus        79 iDiLVNNAGi~~---~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav  154 (242)
T 4b79_A           79 LDVLVNNAGISR---DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAI  154 (242)
T ss_dssp             CSEEEECCCCCC---GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC---CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence            999999999753   567889999999999999999999999999998765 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                      .+|+|++|.|++++|||||+|+||+++|||.+....+++..+.+.++.|++|+++|+|||+.++||+|++++|+|||.|.
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~  234 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLA  234 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEE
Confidence            99999999999999999999999999999999888888888888999999999999999999999999999999999999


Q ss_pred             eCCCccc
Q 041276          237 VDGGFTV  243 (251)
Q Consensus       237 vdgG~~~  243 (251)
                      ||||+++
T Consensus       235 VDGG~la  241 (242)
T 4b79_A          235 VDGGYLC  241 (242)
T ss_dssp             ESTTGGG
T ss_pred             ECccHhh
Confidence            9999976

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.9e-54  Score=352.64  Aligned_cols=223  Identities=27%  Similarity=0.406  Sum_probs=197.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +|+||++|||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.++| 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            48999999999999999                   455566555555   5578889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      |+||+||||||... ..++.+.++++|++.+++|+.++++++|+++|+|+++  |+||+++|.++..+.+....|++||+
T Consensus       102 G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKa  178 (273)
T 4fgs_A          102 GRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKA  178 (273)
T ss_dssp             SCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHH
Confidence            89999999999876 7889999999999999999999999999999999764  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-----HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      |+.+|+|++|.|++++|||||+|+||+++||+.......     +...+.+..+.|++|+++|+|||++++||+|++++|
T Consensus       179 av~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~  258 (273)
T 4fgs_A          179 ALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSF  258 (273)
T ss_dssp             HHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999998765432     334556677899999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +|||.|.||||+++
T Consensus       259 iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          259 VTGAELFVDGGSAQ  272 (273)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             ccCCeEeECcChhh
Confidence            99999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6e-54  Score=347.93  Aligned_cols=225  Identities=28%  Similarity=0.428  Sum_probs=196.9

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++|+||++|||||++|||                   +.+. .+..+++.+.+.++.++.+|++|+++++++++++.++|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD-GAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCC-HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCccc-HHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            579999999999999999                   1111 23445556667788999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       |++|+||||||+.. .. ..+.+.++|++.+++|+.+++.++|+++|+|++++ |+||++||.++..+.+....|++||
T Consensus        82 -G~iDiLVNnAGi~~-~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           82 -GRLDGLVNNAGVND-GI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             -SCCCEEEECCCCCC-CC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHH
Confidence             89999999999864 33 34789999999999999999999999999998765 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCCCC-CCCCHHHHHHHHHHHcCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +|+.+|+|++|.|++++|||||+|+||+++|||.+....    .+...+.+..+.|++ |+++|+|||+.++||+|+.++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~  237 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999876542    244566777889985 899999999999999999999


Q ss_pred             CccccEEEeCCCcc
Q 041276          229 YITGQTICVDGGFT  242 (251)
Q Consensus       229 ~~~G~~i~vdgG~~  242 (251)
                      |+|||.|.||||++
T Consensus       238 ~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          238 HTTGEWLFVDGGYT  251 (258)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CccCCeEEECCCcc
Confidence            99999999999997

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.9e-53  Score=342.71  Aligned_cols=228  Identities=26%  Similarity=0.366  Sum_probs=203.2

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE--------------EEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT--------------GSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~--------------~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +.++|+||++|||||++|||     .++++.+.++|.++.              ++.+|++++++++++++++.++| |+
T Consensus         5 dl~~L~GK~alVTGas~GIG-----~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   78 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAG-----AATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRL-GG   78 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHH-----HHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHT-SS
T ss_pred             hccCCCCCEEEEeccCcHHH-----HHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence            44689999999999999999     888888888776554              46899999999999999999999 89


Q ss_pred             ccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-CChhhHHhHH
Q 041276           77 LNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-LGTIYAATKG  154 (251)
Q Consensus        77 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~~~Y~~sK~  154 (251)
                      +|+||||||+... ..++.+.++++|++.+++|++++++++|+++|+|++++.|+||++||.++..+.+ ....|++||+
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKa  158 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKA  158 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHH
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHH
Confidence            9999999998643 4578899999999999999999999999999999999999999999999999876 5789999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CC----HHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SD----EKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      |+.+|+|++|.|++++|||||+|+||+++||+.....        ..    ++........+|++|+++|||||+.++||
T Consensus       159 al~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fL  238 (261)
T 4h15_A          159 ALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFL  238 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999864321        11    23344556789999999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccc
Q 041276          223 CMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +|++++|+|||.|.||||+..+
T Consensus       239 aS~~a~~itG~~i~VDGG~v~T  260 (261)
T 4h15_A          239 ASDRAASITGAEYTIDGGTVPT  260 (261)
T ss_dssp             HSGGGTTCCSCEEEESTTCSCC
T ss_pred             hCchhcCccCcEEEECCcCccc
Confidence            9999999999999999998654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.5e-51  Score=335.31  Aligned_cols=229  Identities=21%  Similarity=0.220  Sum_probs=207.8

Q ss_pred             ccCCCCCEEEEecCCC--CcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTK--GLG-------------------NEAELNECLREWKTKC-FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        12 ~~~l~~k~vlItGas~--giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      |++|+||++|||||+|  |||                   +++.++++.+.+.+.+ .++.++.+|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            5789999999999875  999                   4556667777776654 47889999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC
Q 041276           70 SSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG  146 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  146 (251)
                      .+++ +++|++|||||+...   ..++.+.+.++|+..+++|+.+.+.+++.+.++|++  .|+||++||.++..+.++.
T Consensus        81 ~~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           81 GKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccc
Confidence            9999 899999999998642   345678899999999999999999999999887764  4999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|++||+|+.+|+|+||.|++++|||||+|+||+++|++.+.....++..+.+..+.|++|+++|+|||+.++||+|++
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~  237 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999999999887777788888888999999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 041276          227 ASYITGQTICVDGGFTV  243 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~  243 (251)
                      ++|+|||.|.||||++.
T Consensus       238 a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          238 SSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCccCCEEEECcCHHh
Confidence            99999999999999874

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.9e-51  Score=328.14  Aligned_cols=220  Identities=25%  Similarity=0.423  Sum_probs=190.8

Q ss_pred             CCEEEEecCCCCcCcHHHH---------------HHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           17 GMTALVTGGTKGLGNEAEL---------------NECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~---------------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      +|+||||||++|||.....               ++..+++.+.+.++.++.+|++|+++++++++++.++| +++|+||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            3999999999999911000               11122333345567888999999999999999999999 8999999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAK  161 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  161 (251)
                      ||||... ..++.+.+.++|++++++|+.+++.++|.++|+|++++ |+||++||.++..+.+....|++||+|+.+|+|
T Consensus        81 NNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk  158 (247)
T 3ged_A           81 NNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTH  158 (247)
T ss_dssp             ECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHH
Confidence            9999876 78899999999999999999999999999999999875 999999999999999999999999999999999


Q ss_pred             HHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       162 ~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      ++|.|+++ |||||+|+||+++|++.+..      .+....++|++|+++|+|||++++||+|  ++|+|||.|.||||+
T Consensus       159 ~lA~ela~-~IrVN~I~PG~i~t~~~~~~------~~~~~~~~Pl~R~g~pediA~~v~fL~s--~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          159 ALAMSLGP-DVLVNCIAPGWINVTEQQEF------TQEDCAAIPAGKVGTPKDISNMVLFLCQ--QDFITGETIIVDGGM  229 (247)
T ss_dssp             HHHHHHTT-TSEEEEEEECSBCCCC---C------CHHHHHTSTTSSCBCHHHHHHHHHHHHH--CSSCCSCEEEESTTG
T ss_pred             HHHHHHCC-CCEEEEEecCcCCCCCcHHH------HHHHHhcCCCCCCcCHHHHHHHHHHHHh--CCCCCCCeEEECcCH
Confidence            99999997 99999999999999987544      2344567899999999999999999997  469999999999999


Q ss_pred             ccccccc
Q 041276          242 TVNGFFF  248 (251)
Q Consensus       242 ~~~~~~~  248 (251)
                      +.+....
T Consensus       230 s~r~~~~  236 (247)
T 3ged_A          230 SKRMIYH  236 (247)
T ss_dssp             GGCCCCT
T ss_pred             HHhCccc
Confidence            9887543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.6e-49  Score=320.92  Aligned_cols=237  Identities=30%  Similarity=0.400  Sum_probs=214.9

Q ss_pred             CCCCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHH
Q 041276            5 YDHDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREK   64 (251)
Q Consensus         5 ~~~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~   64 (251)
                      .+.+...++++++|+||||||++|||                   +.+.++++.+++.+ .+.++.++.+|++|++++++
T Consensus         8 ~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~   87 (266)
T 4egf_A            8 TDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAE   87 (266)
T ss_dssp             --CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHH
T ss_pred             cchhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            34445667889999999999999999                   55666777777765 46789999999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCC
Q 041276           65 LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLST  143 (251)
Q Consensus        65 ~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~  143 (251)
                      +++++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.++..+.
T Consensus        88 ~~~~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (266)
T 4egf_A           88 LARRAAEAF-GGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL  165 (266)
T ss_dssp             HHHHHHHHH-TSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHc-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC
Confidence            999999999 89999999999876 67788999999999999999999999999999998875 6899999999999999


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+.....+....|.+++.+|+|+|+.++||+
T Consensus       166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~  245 (266)
T 4egf_A          166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLA  245 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999987766556666777788899999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 041276          224 MPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++.++++|||.|.||||+++
T Consensus       246 s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          246 SDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCccCcEEEECCCccC
Confidence            99999999999999999976

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=4.2e-48  Score=315.43  Aligned_cols=232  Identities=28%  Similarity=0.384  Sum_probs=212.4

Q ss_pred             CCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      ++|++|||||++|||                    +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++ +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-G   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            579999999999999                    4556677777777777789999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||+|
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           82 RLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            9999999999876 677889999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.|+++++.|++++||+||+|+||+++|++.+.....++.........|.+++.+|+|+|+.++||+++.++++|||.|
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i  240 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI  240 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEE
Confidence            99999999999999999999999999999998877655666777777899999999999999999999999999999999


Q ss_pred             EeCCCccccccccc
Q 041276          236 CVDGGFTVNGFFFR  249 (251)
Q Consensus       236 ~vdgG~~~~~~~~~  249 (251)
                      .||||+++.....+
T Consensus       241 ~vdGG~~~~~~~~~  254 (258)
T 3oid_A          241 IVDGGRSLLVLEHH  254 (258)
T ss_dssp             EESTTGGGBCC---
T ss_pred             EECCCccCCCCCCC
Confidence            99999998776543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.2e-47  Score=311.06  Aligned_cols=226  Identities=31%  Similarity=0.483  Sum_probs=203.0

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++++|++|||||++|||                   +.+.++++.+.+..   +..++.+|++|+++++++++++.+
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHH
Confidence            45678999999999999999                   33444444444432   456789999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      ++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++
T Consensus        80 ~~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (248)
T 3op4_A           80 EF-GGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAA  157 (248)
T ss_dssp             HH-CCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHH
Confidence            99 89999999999876 67788999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+..  .++.........|.+++.+|+|+|+.++||+++.++++|
T Consensus       158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~it  235 (248)
T 3op4_A          158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYIT  235 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCcc
Confidence            999999999999999999999999999999999998765  345556667788999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      ||.|.+|||+++
T Consensus       236 G~~i~vdgG~~~  247 (248)
T 3op4_A          236 GETLHVNGGMYM  247 (248)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CcEEEECCCeec
Confidence            999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2e-48  Score=319.45  Aligned_cols=231  Identities=29%  Similarity=0.509  Sum_probs=213.7

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++++||++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999                   566777788888877788999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++|
T Consensus       101 ~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (271)
T 4ibo_A          101 G-IDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVA  178 (271)
T ss_dssp             T-CCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             C-CCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHH
Confidence            9 89999999999876 677889999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.++||+++.++++||
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG  258 (271)
T 4ibo_A          179 KGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNG  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999999999999999999999998765445566677777899999999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                      |.|.||||+++.
T Consensus       259 ~~i~vdGG~~~~  270 (271)
T 4ibo_A          259 QIIYVDGGMLSV  270 (271)
T ss_dssp             CEEEESTTGGGB
T ss_pred             cEEEECCCeecc
Confidence            999999998764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-47  Score=313.65  Aligned_cols=231  Identities=31%  Similarity=0.454  Sum_probs=211.7

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .++++++|++|||||++|||                   +.+.++++.+++.+.+ .++.++.+|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            47789999999999999999                   5566777777777665 688999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y  149 (251)
                      +++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+. .+.++...|
T Consensus        84 ~~~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           84 EEF-GGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHH-SCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHh-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhh
Confidence            999 89999999999876 678889999999999999999999999999999999888999999999986 788889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||+|+||++.|++....  .++.........|.+++.+|+|+|+.++||+++.+++
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~  239 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGY  239 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999987543  4566777778899999999999999999999999999


Q ss_pred             ccccEEEeCCCccccc
Q 041276          230 ITGQTICVDGGFTVNG  245 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~  245 (251)
                      +|||.|.||||+++..
T Consensus       240 itG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          240 ITGQAIAVDGGQVLPE  255 (262)
T ss_dssp             CCSCEEEESTTTTCCS
T ss_pred             CcCCEEEECCCeecCc
Confidence            9999999999998754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=8.8e-48  Score=313.25  Aligned_cols=230  Identities=30%  Similarity=0.496  Sum_probs=210.6

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999                   55667777788877788899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      ++ +++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++
T Consensus        86 ~~-g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  162 (256)
T 3gaf_A           86 QF-GKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS  162 (256)
T ss_dssp             HH-SCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH
Confidence            99 89999999999876 5556 899999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+... .++....+....|.+++.+|+|+|+.++||+++.++++|
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~it  241 (256)
T 3gaf_A          163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS  241 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCcc
Confidence            9999999999999999999999999999999999876543 355566777789999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||.|.||||....
T Consensus       242 G~~i~vdgG~~~~  254 (256)
T 3gaf_A          242 GQVLTVSGGGVQE  254 (256)
T ss_dssp             SCEEEESTTSCCC
T ss_pred             CCEEEECCCcccc
Confidence            9999999998763

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.9e-48  Score=319.05  Aligned_cols=233  Identities=27%  Similarity=0.397  Sum_probs=203.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46778999999999999999                   55667777788877778899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc--CCCCChhh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL--STNLGTIY  149 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~--~~~~~~~Y  149 (251)
                      ++ +++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..  +.++...|
T Consensus       102 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          102 KF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             HH-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             Hh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence            99 8999999999987645788899999999999999999999999999999998889999999999987  77889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHH-----HHHHhhCCCC--CCCCCHHHHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKF-----LEEVKCRTPM--ERPGEPKEVSSLVAFL  222 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~dva~~~~~l  222 (251)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++........+.     ........|.  +++.+|+|+|++++||
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL  260 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFL  260 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998765332221     1122334566  8899999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccc
Q 041276          223 CMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++.++++|||.|.||||+++.
T Consensus       261 ~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          261 VSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             TSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCccccCCcCCEEEECcCcccc
Confidence            9999999999999999998753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=6.8e-48  Score=315.47  Aligned_cols=230  Identities=23%  Similarity=0.363  Sum_probs=203.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCC-eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCF-KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++++|++|||||++|||                   +.+.++++.+++.. .+. ++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            578999999999999999                   55667777777765 333 488999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++
T Consensus        84 ~~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           84 TL-GCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HH-CSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            99 89999999999876 67888999999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-------C-HHHHHHHhh--CCCCCCCCCHHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-------D-EKFLEEVKC--RTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-------~-~~~~~~~~~--~~~~~~~~~~~dva~~~~~  221 (251)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.+....       . +........  ..|.+++.+|+|+|+.++|
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  241 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILF  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999998654321       1 122222222  2899999999999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+++.++++|||.|.||||+++.
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          242 LASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HhCchhcCcCCCEEEECCCCcCC
Confidence            99999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=8.5e-48  Score=316.04  Aligned_cols=235  Identities=27%  Similarity=0.420  Sum_probs=208.2

Q ss_pred             CCCCcccCCCCCEEEEecCCCCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 041276            7 HDRQDRWSLQGMTALVTGGTKGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +++...+++++|++|||||++|||                  +.+.+++..+++...+.++.++.+|++|.++++++.+.
T Consensus        21 ~~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (273)
T 3uf0_A           21 QSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE  100 (273)
T ss_dssp             ----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             hhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            345667889999999999999999                  33445566666666677888999999999999999555


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      + +++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...
T Consensus       101 ~-~~~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  177 (273)
T 3uf0_A          101 L-AAT-RRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAA  177 (273)
T ss_dssp             H-HHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHH
T ss_pred             H-Hhc-CCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChh
Confidence            4 556 79999999999876 67888999999999999999999999999999999988899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||+|++.|+++++.|++++||+||+|+||++.|++.......++....+....|.+++.+|+|+|++++||+++.++
T Consensus       178 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~  257 (273)
T 3uf0_A          178 YAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAAS  257 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999999876555666677777889999999999999999999999999


Q ss_pred             CccccEEEeCCCcccc
Q 041276          229 YITGQTICVDGGFTVN  244 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~  244 (251)
                      ++|||.|.||||+.++
T Consensus       258 ~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          258 YVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCcCCEEEECcCccCC
Confidence            9999999999998763

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.6e-47  Score=312.71  Aligned_cols=234  Identities=26%  Similarity=0.329  Sum_probs=210.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +.++++|+||||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3568899999999999999                   556677777777777778999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~  151 (251)
                      + +++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+. .+.++...|++
T Consensus        83 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           83 F-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             H-SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            9 899999999998754678889999999999999999999999999999999888999999999998 67888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.....  ..++....+....|.+++.+|+|+|+.++||+++.+++
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~  241 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999876522  23455666777889999999999999999999999999


Q ss_pred             ccccEEEeCCCcccccc
Q 041276          230 ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~  246 (251)
                      +|||.|.||||+++...
T Consensus       242 itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          242 VTGAALLADGGASVTKA  258 (280)
T ss_dssp             CCSCEEEESTTGGGCC-
T ss_pred             CcCcEEEECCCcccccc
Confidence            99999999999988653

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=5.1e-47  Score=307.02  Aligned_cols=225  Identities=31%  Similarity=0.475  Sum_probs=207.7

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +.+|++|||||++|||                    +.+.++++.+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3579999999999999                    3466677777777777889999999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        81 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           81 GSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            89999999999876 67788999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |++.|+++++.|++++||+||+|+||++.|++.+..  .++..+......|.+++.+|+|+|+.+++|+++.++++|||.
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~  237 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT  237 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence            999999999999999999999999999999998765  356667777889999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      |.+|||+.+
T Consensus       238 i~vdgG~~~  246 (246)
T 3osu_A          238 IHVNGGMYM  246 (246)
T ss_dssp             EEESTTSCC
T ss_pred             EEeCCCccC
Confidence            999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2e-47  Score=312.45  Aligned_cols=230  Identities=23%  Similarity=0.274  Sum_probs=209.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999                   5667778888888878889999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ |+||++||..+..+.+....|++||
T Consensus        87 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK  164 (264)
T 3ucx_A           87 -GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAK  164 (264)
T ss_dssp             -SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred             -CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHH
Confidence             89999999999875577888999999999999999999999999999998876 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +|++.|+++++.|++++||+||+|+||+++|++.+...         ..++....+....|.+++.+|+|+|+.++||++
T Consensus       165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s  244 (264)
T 3ucx_A          165 SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMAS  244 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999865432         124556667778999999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 041276          225 PAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +.++++|||.|.||||.+++
T Consensus       245 ~~~~~itG~~i~vdGG~~~~  264 (264)
T 3ucx_A          245 DLASGITGQALDVNCGEYKA  264 (264)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             ccccCCCCCEEEECCCccCC
Confidence            99999999999999999864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.1e-47  Score=314.06  Aligned_cols=232  Identities=26%  Similarity=0.368  Sum_probs=212.0

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF---KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+++++|+||||||++|||                   +.+.+++..+++.+.+.   ++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4578999999999999999                   55667777777776654   7899999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+++ +++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.++..+.+....|
T Consensus        86 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  164 (281)
T 3svt_A           86 TAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY  164 (281)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence            9999 899999999998554678889999999999999999999999999999999888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+++++|+++.+++
T Consensus       165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~  244 (281)
T 3svt_A          165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASF  244 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999999999999999998765555666677777889999999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      +|||.|.+|||..+.
T Consensus       245 itG~~~~vdgG~~~~  259 (281)
T 3svt_A          245 VTGQVINVDGGQMLR  259 (281)
T ss_dssp             CCSCEEEESTTGGGS
T ss_pred             CCCCEEEeCCChhcc
Confidence            999999999999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.6e-46  Score=310.56  Aligned_cols=231  Identities=25%  Similarity=0.338  Sum_probs=202.4

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------c----------------HHHHHHHHHHHHhcCCeeEEEeccC
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------N----------------EAELNECLREWKTKCFKVTGSVCDA   56 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~----------------~~~~~~~~~~~~~~~~~~~~~~~D~   56 (251)
                      +.++++|++|||||++|||                   +                .+.++++.+.+...+.++.++.+|+
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            3468999999999999999                   2                5566677777777777889999999


Q ss_pred             CCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEec
Q 041276           57 SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVS  135 (251)
Q Consensus        57 ~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vs  135 (251)
                      +|+++++++++++.+++ +++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++|
T Consensus        86 ~~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TCHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            99999999999999999 89999999999877444588899999999999999999999999999998865 68999999


Q ss_pred             ccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC-----------CCCHHHHH---HHh
Q 041276          136 SVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY-----------LSDEKFLE---EVK  201 (251)
Q Consensus       136 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~-----------~~~~~~~~---~~~  201 (251)
                      |.++..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|+|.+..           ....+...   ...
T Consensus       165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T 3uve_A          165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF  244 (286)
T ss_dssp             CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT
T ss_pred             chhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhh
Confidence            9999999999999999999999999999999999999999999999999997531           11111111   133


Q ss_pred             hCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          202 CRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       202 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ...| +++.+|+|+|++++||+++.++++|||.|.||||++++
T Consensus       245 ~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          245 HTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             CSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            4566 88899999999999999999999999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.3e-47  Score=308.39  Aligned_cols=233  Identities=24%  Similarity=0.388  Sum_probs=205.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999                   5566777777777767789999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hCCCceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+ +++.|+||++||..+..+.++...|++|
T Consensus        82 -g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           82 -GRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             -SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence             89999999999876 67788999999999999999999999999999995 4457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHc-cCCeEEEEEecCcccCCCCCCCC-CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          153 KGAMNQLAKNLACEWA-RDNIRINSVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       153 K~a~~~~~~~la~e~~-~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      |+|+++|+++++.|++ ++||+||+|+||+++|++..... ..++..+......|.+++.+|+|+|+.++||+++.++++
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  239 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYI  239 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            9999999999999997 77999999999999999765422 223344555677899999999999999999999999999


Q ss_pred             cccEEEeCCCccccccc
Q 041276          231 TGQTICVDGGFTVNGFF  247 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~~  247 (251)
                      |||.|.+|||+++....
T Consensus       240 tG~~i~vdGG~~~~~~~  256 (257)
T 3imf_A          240 NGTCMTMDGGQHLHQYP  256 (257)
T ss_dssp             CSCEEEESTTTTSCCCC
T ss_pred             cCCEEEECCCcccCCCC
Confidence            99999999999986543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.2e-47  Score=312.14  Aligned_cols=228  Identities=29%  Similarity=0.471  Sum_probs=208.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ..+++|++|||||++|||                   +.+.++++.+.+...+.++.++.+|++|+++++++++++.+++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            458999999999999999                   4566677777777777788899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus       104 -g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (270)
T 3ftp_A          104 -GALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAK  181 (270)
T ss_dssp             -SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHH
Confidence             89999999999876 6678889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +|++.|+++++.|++++||+||+|+||+++|++.+..  .++....+....|.+++.+|+|+|+.++||+++.+.++|||
T Consensus       182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~  259 (270)
T 3ftp_A          182 AGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGT  259 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCc
Confidence            9999999999999999999999999999999987654  34455666778899999999999999999999999999999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .|.||||+.++
T Consensus       260 ~i~vdGG~~~s  270 (270)
T 3ftp_A          260 TLHVNGGMFMS  270 (270)
T ss_dssp             EEEESTTSSCC
T ss_pred             EEEECCCcccC
Confidence            99999998763

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.9e-47  Score=314.91  Aligned_cols=234  Identities=30%  Similarity=0.383  Sum_probs=210.5

Q ss_pred             CCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHH
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +...++++++|+||||||++|||                   +.+.++++.+++.+.+ .++.++.+|++|+++++++++
T Consensus        32 ~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           32 ERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             --CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence            44557889999999999999999                   4455566666666655 578899999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLG  146 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~  146 (251)
                      ++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+. .+.++.
T Consensus       112 ~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~  189 (293)
T 3rih_A          112 TVVDAF-GALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW  189 (293)
T ss_dssp             HHHHHH-SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTC
T ss_pred             HHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCC
Confidence            999999 89999999999876 677889999999999999999999999999999999888999999999996 788889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|++||+|++.|+++++.|++++||+||+|+||++.|++....  .++....+....|.+++.+|+|+|+.++||+++.
T Consensus       190 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~  267 (293)
T 3rih_A          190 SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDE  267 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999987554  3556677778899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccccc
Q 041276          227 ASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~~~  245 (251)
                      +.++|||.|.||||+++..
T Consensus       268 a~~itG~~i~vdGG~~~~~  286 (293)
T 3rih_A          268 AGYITGQAIVVDGGQVLPE  286 (293)
T ss_dssp             GTTCCSCEEEESTTTTCBS
T ss_pred             ccCCCCCEEEECCCccCCC
Confidence            9999999999999998854

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.3e-46  Score=311.48  Aligned_cols=231  Identities=24%  Similarity=0.351  Sum_probs=202.4

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------c------------HHHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------N------------EAELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      +.++++|++|||||++|||                   +            .+.+++..+++...+.++.++.+|++|++
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD  102 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence            4568999999999999999                   2            56677777777777788999999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccccc
Q 041276           61 EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCG  139 (251)
Q Consensus        61 ~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~  139 (251)
                      +++++++++.+.+ +++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.++
T Consensus       103 ~v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~  181 (299)
T 3t7c_A          103 AMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG  181 (299)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence            9999999999999 89999999999887444588999999999999999999999999999988765 689999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-----------CC-HHH--HHHHhhCCC
Q 041276          140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-----------SD-EKF--LEEVKCRTP  205 (251)
Q Consensus       140 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-----------~~-~~~--~~~~~~~~~  205 (251)
                      ..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.....           .. +..  ........|
T Consensus       182 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  261 (299)
T 3t7c_A          182 LRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP  261 (299)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC
Confidence            9999999999999999999999999999999999999999999999975310           11 111  112334556


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                       +++.+|+|+|++++||+++.++++|||.|.||||++++
T Consensus       262 -~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          262 -IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence             78899999999999999999999999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.2e-46  Score=308.57  Aligned_cols=226  Identities=31%  Similarity=0.444  Sum_probs=205.4

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+++++|+||||||++|||                    +...++++.+.+...+.++.++.+|++|+++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999                    34556667777777777899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      ++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++
T Consensus       103 ~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  180 (269)
T 4dmm_A          103 RW-GRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA  180 (269)
T ss_dssp             HH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH
Confidence            99 89999999999876 67788999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC-CCCCc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP-AASYI  230 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~  230 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++....     ..+......|.+++.+|+|+|+.++||+++ .+.++
T Consensus       181 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~i  255 (269)
T 4dmm_A          181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-----AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYI  255 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-----HHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGC
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-----cHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCC
Confidence            999999999999999999999999999999999987532     235566778999999999999999999998 78899


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      |||.|.||||+++.
T Consensus       256 tG~~i~vdGG~~~s  269 (269)
T 4dmm_A          256 TGQVINIDGGLVMA  269 (269)
T ss_dssp             CSCEEEESTTSCCC
T ss_pred             cCCEEEECCCeecC
Confidence            99999999999863

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=5.7e-47  Score=310.01  Aligned_cols=226  Identities=30%  Similarity=0.420  Sum_probs=192.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++++|+||||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            46789999999999999999                   233333333332   45688899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|++
T Consensus        98 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  175 (266)
T 3grp_A           98 EM-EGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCA  175 (266)
T ss_dssp             HH-TSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHH
Confidence            99 89999999999876 66778899999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+..  .++..+.+....|.+++.+|+|+|+.++||+++.++++|
T Consensus       176 sKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~it  253 (266)
T 3grp_A          176 AKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLT  253 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999999987664  355667777889999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      ||.|.||||+++
T Consensus       254 G~~i~vdGG~~~  265 (266)
T 3grp_A          254 GQTLHINGGMAM  265 (266)
T ss_dssp             SCEEEESTTC--
T ss_pred             CCEEEECCCeee
Confidence            999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6.2e-47  Score=311.93  Aligned_cols=227  Identities=26%  Similarity=0.428  Sum_probs=205.3

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +++|++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++ +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-G  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999999999999                   5666777888888778889999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHH--HHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP--LLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|  .|++++.|+||++||.++..+.++...|++||
T Consensus       101 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          101 PIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             SCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHH
Confidence            9999999999876 67788999999999999999999999999999  58888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +|++.|+++++.|++++||+||+|+||+++|++.+...         ..++..+.+....|.+++.+|+|+|+.++||++
T Consensus       180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  259 (279)
T 3sju_A          180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT  259 (279)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999864321         235566777788999999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 041276          225 PAASYITGQTICVDGGFTV  243 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~  243 (251)
                      +.++++|||.|.||||+++
T Consensus       260 ~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          260 DAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             SGGGGCCSCEEEESTTCCC
T ss_pred             ccccCcCCcEEEECCCccC
Confidence            9999999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=8.3e-47  Score=305.94  Aligned_cols=225  Identities=26%  Similarity=0.362  Sum_probs=196.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||++|||                   +.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            468899999999999999                   333344444333   4467788999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.++...|++|
T Consensus        79 -g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (247)
T 3rwb_A           79 -GGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAA  156 (247)
T ss_dssp             -SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHH
Confidence             89999999999886 67788999999999999999999999999999999876 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|++.|+++++.|++++||+||+|+||+++|++.+..... ..........|.+++.+|+|+|+.++||+++.++++||
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG  235 (247)
T 3rwb_A          157 KGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITG  235 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999999999999999999999987654222 22222223368899999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      |.|.+|||++.
T Consensus       236 ~~i~vdGG~~~  246 (247)
T 3rwb_A          236 QTLNVDAGMVR  246 (247)
T ss_dssp             CEEEESTTSSC
T ss_pred             CEEEECCCccC
Confidence            99999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.2e-46  Score=307.34  Aligned_cols=228  Identities=25%  Similarity=0.372  Sum_probs=203.7

Q ss_pred             cccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+.++++|++|||||++|||                    +.+.++++.+++.+.+.++.++.+|++|+++++++++++.
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            35578999999999999999                    3455667777777777889999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc-cccCCCCChhh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC-GVLSTNLGTIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~-~~~~~~~~~~Y  149 (251)
                      +++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.. +..+.++...|
T Consensus        92 ~~~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  167 (270)
T 3is3_A           92 AHF-GHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLY  167 (270)
T ss_dssp             HHH-SCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHH
T ss_pred             HHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchh
Confidence            999 89999999999886 678889999999999999999999999999999976  48999999988 56788889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----------CCCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----------LSDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+..          ...++.........|.+++.+|+|+|+.+
T Consensus       168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  247 (270)
T 3is3_A          168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999987521          12244555566678999999999999999


Q ss_pred             HHHcCCCCCCccccEEEeCCCcc
Q 041276          220 AFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      +||+++.++++|||.|.||||+.
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          248 GFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHcCCccCCccCcEEEeCCCCC
Confidence            99999999999999999999973

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-46  Score=304.20  Aligned_cols=235  Identities=57%  Similarity=0.954  Sum_probs=202.8

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999                   45566667777766677888999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++
T Consensus        95 ~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSA  173 (273)
T ss_dssp             HTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHH
Confidence            87458999999999875 66788899999999999999999999999999999887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++......    .++..+.+....|.+++.+|+|+|+.+++|+++.+
T Consensus       174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  253 (273)
T 1ae1_A          174 SKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA  253 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999765433    33444555566799999999999999999999999


Q ss_pred             CCccccEEEeCCCcccccc
Q 041276          228 SYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~~~  246 (251)
                      ++++||.|.+|||+++.++
T Consensus       254 ~~~tG~~i~vdGG~~~~~~  272 (273)
T 1ae1_A          254 SYITGQIIWADGGFTANGG  272 (273)
T ss_dssp             TTCCSCEEEESTTGGGCSC
T ss_pred             cCcCCCEEEECCCcccCCC
Confidence            9999999999999988764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-46  Score=310.24  Aligned_cols=231  Identities=23%  Similarity=0.354  Sum_probs=183.4

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.++++|++|||||++|||                    +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4468899999999999999                    45566777777777777899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCCCh
Q 041276           72 LFNGKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++ +++|+||||||.. ....++.+.+.++|++.+++|+.+++.++++++|+|++++   .|+||++||.++..+.++..
T Consensus       104 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~  182 (280)
T 4da9_A          104 EF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERL  182 (280)
T ss_dssp             HH-SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCH
T ss_pred             Hc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCcc
Confidence            99 8999999999984 2256788999999999999999999999999999998865   68999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh-CCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC-RTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.+....  +....... ..|.+++.+|+|+|+.+++|+++.
T Consensus       183 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (280)
T 4da9_A          183 DYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG--KYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ  260 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch--hHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999999876532  22222333 678999999999999999999999


Q ss_pred             CCCccccEEEeCCCccccc
Q 041276          227 ASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~~~  245 (251)
                      ++++|||.|.||||+++..
T Consensus       261 ~~~itG~~i~vdGG~~~~~  279 (280)
T 4da9_A          261 FGFATGSVIQADGGLSIGR  279 (280)
T ss_dssp             TGGGTTCEEEESTTCC---
T ss_pred             ccCCCCCEEEECCCcccCC
Confidence            9999999999999998754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.4e-46  Score=307.07  Aligned_cols=230  Identities=28%  Similarity=0.433  Sum_probs=195.6

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +.++.+|++|||||++|||                    +.+.++++.+++... +.++.++.+|++|+++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            6678999999999999999                    334556666666654 5678899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|+
T Consensus       100 ~~~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A          100 DRF-GGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHT-SSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHC-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHH
Confidence            999 89999999999876 6778899999999999999999999999999999998889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH---------H-HHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE---------K-FLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+......         + ..+.+....|.+++.+|+|+|+.++
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~  257 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL  257 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            99999999999999999999999999999999999976543221         1 1123455689999999999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCccc
Q 041276          221 FLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +|+++.++++|||.|.||||+++
T Consensus       258 ~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          258 YLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999876

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.6e-46  Score=309.19  Aligned_cols=232  Identities=23%  Similarity=0.340  Sum_probs=207.2

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+..+++|++|||||++|||                   +.+.+++..+++.. .+.++.++.+|++|+++++++++++.
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34458999999999999999                   44555666666643 36688999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|+
T Consensus       101 ~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (277)
T 4fc7_A          101 KEF-GRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAG  178 (277)
T ss_dssp             HHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHH
T ss_pred             HHc-CCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHH
Confidence            999 89999999999876 6778899999999999999999999999999999888789999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC-CCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE-PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +||+|++.|+++++.|++++||+||+|+||++.|++.. .....+..........|.+++.+|+|+|+.++||+++.+++
T Consensus       179 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~  258 (277)
T 4fc7_A          179 SAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASY  258 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999998632 22234556677778899999999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      +|||.|.||||+.+.
T Consensus       259 itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          259 VTGAVLVADGGAWLT  273 (277)
T ss_dssp             CCSCEEEESTTHHHH
T ss_pred             cCCCEEEECCCcccC
Confidence            999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.7e-46  Score=307.58  Aligned_cols=228  Identities=29%  Similarity=0.480  Sum_probs=205.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999                   44556677777777777888999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCC--CCChh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLST--NLGTI  148 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~--~~~~~  148 (251)
                      ++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.  +....
T Consensus       106 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          106 EL-GGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             HH-SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            99 89999999999876 67788999999999999999999999999999999876 4899999999988765  35789


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+..   ++....+....|.+++.+|+|+|+.++||+++.++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~  260 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAASS  260 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999999998754   33456667788999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      ++|||.|.||||+++
T Consensus       261 ~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          261 YMTGSDIVIDGGYTC  275 (276)
T ss_dssp             TCCSCEEEESTTTTC
T ss_pred             CccCcEEEECcCccC
Confidence            999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=6.9e-46  Score=306.01  Aligned_cols=231  Identities=25%  Similarity=0.300  Sum_probs=201.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------c------------HHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------N------------EAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      .|.++++|++|||||++|||                   +            .+.+++..+.+...+.++.++.+|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            46789999999999999999                   1            4556666666766677889999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           60 AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        60 ~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++
T Consensus        84 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           84 AALESFVAEAEDTL-GGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHHHHHHHHHHH-TCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999999999999 89999999999876 67788999999999999999999999999999999988899999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC------C-----CCH-HHHH--HHhhCCC
Q 041276          140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY------L-----SDE-KFLE--EVKCRTP  205 (251)
Q Consensus       140 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~------~-----~~~-~~~~--~~~~~~~  205 (251)
                      ..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+..      .     ... ....  ......+
T Consensus       162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (281)
T 3s55_A          162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY  241 (281)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence            999999999999999999999999999999999999999999999997531      0     111 1111  1122334


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                       +++.+|+|+|+.+++|+++.++++|||.|.||||++++
T Consensus       242 -~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          242 -APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             -cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence             78899999999999999999999999999999999875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=7.2e-46  Score=304.36  Aligned_cols=228  Identities=26%  Similarity=0.380  Sum_probs=200.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------CeeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC---------------------FKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +.++++|++|||||++|||     .++++.+.+.|                     .++.++.+|++|+++++++++++.
T Consensus         6 ~~~l~~k~vlVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIG-----LETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHH
Confidence            3468999999999999999     44444444433                     346677899999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           71 SLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      +++ +++|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|
T Consensus        81 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (271)
T 3tzq_B           81 DTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAY  159 (271)
T ss_dssp             HHH-SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHH
Confidence            999 899999999998742 456778999999999999999999999999999999988999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+... .++....+....|.+++.+|+|+|+.++||+++.+.+
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~  238 (271)
T 3tzq_B          160 ACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAF  238 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            999999999999999999999999999999999999987433 3556677778889999999999999999999999999


Q ss_pred             ccccEEEeCCCcccccc
Q 041276          230 ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~  246 (251)
                      +|||.|.+|||......
T Consensus       239 itG~~i~vdGG~~~~~~  255 (271)
T 3tzq_B          239 ITGQVIAADSGLLAHLP  255 (271)
T ss_dssp             CCSCEEEESTTTTTBCT
T ss_pred             cCCCEEEECCCccccCC
Confidence            99999999999544333

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-45  Score=298.32  Aligned_cols=227  Identities=31%  Similarity=0.444  Sum_probs=209.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.+.++++.+.+++.+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN-   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            57899999999999999                   5566777777777777789999999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        81 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           81 LAIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             CCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            89999999999876 67788899999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |++.|+++++.|++++||+||.|+||+++|++.+..  .++.........|.+++.+|+|+|+.+++|+++.+.++|||.
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~  237 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQT  237 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCE
Confidence            999999999999999999999999999999998765  345556667788999999999999999999999999999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      |.+|||+.+.
T Consensus       238 i~vdgG~~~~  247 (247)
T 3lyl_A          238 LHVNGGMYMA  247 (247)
T ss_dssp             EEESTTSSCC
T ss_pred             EEECCCEecC
Confidence            9999999863

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.4e-46  Score=304.89  Aligned_cols=225  Identities=25%  Similarity=0.347  Sum_probs=193.7

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+.+++|++|||||++|||                    +.+.++++.+.+...+.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456899999999999999                    34556666677777777889999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|+|++.  |+||++||..+..+.+....|++
T Consensus       102 ~~-g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~a  177 (267)
T 3u5t_A          102 AF-GGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG--GRIINMSTSQVGLLHPSYGIYAA  177 (267)
T ss_dssp             HH-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCTHHHHCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CeEEEEeChhhccCCCCchHHHH
Confidence            99 89999999999876 6788899999999999999999999999999999763  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++..... .++..+.+....|.+++.+|+|+|++++||+++.+.++|
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  256 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVN  256 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999999976533 234456667788999999999999999999999999999


Q ss_pred             ccEEEeCCCc
Q 041276          232 GQTICVDGGF  241 (251)
Q Consensus       232 G~~i~vdgG~  241 (251)
                      ||.|.||||+
T Consensus       257 G~~i~vdGG~  266 (267)
T 3u5t_A          257 GQVLRANGGI  266 (267)
T ss_dssp             SEEEEESSSC
T ss_pred             CCEEEeCCCc
Confidence            9999999997

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.2e-46  Score=306.54  Aligned_cols=232  Identities=28%  Similarity=0.455  Sum_probs=201.7

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+.+++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence            345678999999999999999                   233333333332   4467788999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|+
T Consensus        97 ~~~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 4dqx_A           97 AKW-GRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYV  174 (277)
T ss_dssp             HHH-SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHc-CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHH
Confidence            999 89999999999876 6778899999999999999999999999999999998889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +||+|++.|+++++.|++++||+||+|+||+++|++....    .........+....|.+++.+|+|+|+.+++|+++.
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~  254 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDR  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999983221    112333444677889999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccccc
Q 041276          227 ASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~~~~  246 (251)
                      ++++|||.|.+|||+++...
T Consensus       255 ~~~itG~~i~vdGG~~~~~~  274 (277)
T 4dqx_A          255 SRFATGSILTVDGGSSIGNH  274 (277)
T ss_dssp             GTTCCSCEEEESSSSSSCCT
T ss_pred             cCCCcCCEEEECCchhhhhc
Confidence            99999999999999988653

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-46  Score=303.11  Aligned_cols=236  Identities=35%  Similarity=0.567  Sum_probs=204.1

Q ss_pred             CCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHH-HhcCCeeEEEeccCCCHHHHHHHH
Q 041276            7 HDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREW-KTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      +++.+..++++|++|||||++|||                   +.+.++++.+++ ...+.++.++.+|+++++++++++
T Consensus        11 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   90 (267)
T 1vl8_A           11 HHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   90 (267)
T ss_dssp             ------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            344566778999999999999999                   445556666666 344667888999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc-cccCCCC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC-GVLSTNL  145 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~-~~~~~~~  145 (251)
                      +++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.+ +..+.+.
T Consensus        91 ~~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  168 (267)
T 1vl8_A           91 EAVKEKF-GKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN  168 (267)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS
T ss_pred             HHHHHHc-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC
Confidence            9999999 89999999999876 6677889999999999999999999999999999988889999999999 8888888


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|+++
T Consensus       169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~  248 (267)
T 1vl8_A          169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE  248 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999999998754332344445555678889999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 041276          226 AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+++++|+.|.+|||++++
T Consensus       249 ~~~~itG~~i~vdGG~~~~  267 (267)
T 1vl8_A          249 EAKYVTGQIIFVDGGWTAN  267 (267)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             cccCCcCCeEEECCCCCCC
Confidence            8999999999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-45  Score=302.69  Aligned_cols=224  Identities=27%  Similarity=0.397  Sum_probs=202.0

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+++++|++|||||++|||                    +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999                    34566777777777788899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-CCCChhhH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-TNLGTIYA  150 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-~~~~~~Y~  150 (251)
                      ++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+... .++...|+
T Consensus       106 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~  181 (271)
T 3v2g_A          106 AL-GGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYS  181 (271)
T ss_dssp             HH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHH
T ss_pred             Hc-CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHH
Confidence            99 89999999999876 678889999999999999999999999999999965  489999999877765 68899999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.....   +..+......|.+++.+|+|+|+.++||+++.++++
T Consensus       182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~i  258 (271)
T 3v2g_A          182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFV  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCc
Confidence            99999999999999999999999999999999999986532   234455677899999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 041276          231 TGQTICVDGGFT  242 (251)
Q Consensus       231 ~G~~i~vdgG~~  242 (251)
                      |||.|.||||++
T Consensus       259 tG~~i~vdGG~~  270 (271)
T 3v2g_A          259 TGASLTIDGGAN  270 (271)
T ss_dssp             CSCEEEESTTTT
T ss_pred             cCCEEEeCcCcc
Confidence            999999999986

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=8.8e-46  Score=301.23  Aligned_cols=229  Identities=30%  Similarity=0.387  Sum_probs=199.0

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      |.++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.+.
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999                   334444444443   346788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++.  |+||++||.++..+.++...|++|
T Consensus        80 ~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~as  155 (255)
T 4eso_A           80 L-GAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGMSVYSAS  155 (255)
T ss_dssp             H-SSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCGGGSSBCTTBHHHHHH
T ss_pred             h-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--CEEEEECChhhcCCCCCchHHHHH
Confidence            9 89999999999876 6788899999999999999999999999999999763  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH----HHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE----KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+|++.|+++++.|++++||+||+|+||+++|++.......+    ..........|.+++.+|+|+|+.++||+++ ++
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~  234 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-AT  234 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CT
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-Cc
Confidence            999999999999999999999999999999999876533232    2233445568999999999999999999998 99


Q ss_pred             CccccEEEeCCCcccccccc
Q 041276          229 YITGQTICVDGGFTVNGFFF  248 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~~~~~  248 (251)
                      ++|||.|.||||++....++
T Consensus       235 ~itG~~i~vdGG~~~~l~~~  254 (255)
T 4eso_A          235 FTTGAKLAVDGGLGQKLSTA  254 (255)
T ss_dssp             TCCSCEEEESTTTTTTBCC-
T ss_pred             CccCCEEEECCCccccCcCc
Confidence            99999999999998876543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-46  Score=305.44  Aligned_cols=228  Identities=25%  Similarity=0.390  Sum_probs=197.6

Q ss_pred             cCCCCCEEEEecCCCCcC------------------c--------------HHHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           13 WSLQGMTALVTGGTKGLG------------------N--------------EAELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      .++++|++|||||++|||                  .              .+.+++..+.+...+.++.++.+|++|++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            468999999999999999                  1              34455556666666778888999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccccc
Q 041276           61 EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCG  139 (251)
Q Consensus        61 ~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~  139 (251)
                      +++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.++
T Consensus        87 ~v~~~~~~~~~~~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           87 RLRKVVDDGVAAL-GRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            9999999999999 89999999999886 67788999999999999999999999999999998875 689999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCC
Q 041276          140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPG  210 (251)
Q Consensus       140 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~  210 (251)
                      ..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.+...         ..+..........|. ++.
T Consensus       165 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~  243 (277)
T 3tsc_A          165 MKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVA  243 (277)
T ss_dssp             TSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCB
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCC
Confidence            9999999999999999999999999999999999999999999999875310         011111122233444 788


Q ss_pred             CHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +|+|+|++++||+++.++++|||.|.||||+++
T Consensus       244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          244 EPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            999999999999999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.2e-45  Score=301.21  Aligned_cols=227  Identities=25%  Similarity=0.328  Sum_probs=198.6

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||++|||                   +.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999                   233333333333   3356788999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||.++..+.+....|++|
T Consensus        81 -g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (259)
T 4e6p_A           81 -GGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCAT  158 (259)
T ss_dssp             -SSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             -CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHH
Confidence             89999999999876 67788999999999999999999999999999998865 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      |+|++.|+++++.|++++||+||+|+||+++|++.+...         ..++....+....|.+++.+|+|+|++++||+
T Consensus       159 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~  238 (259)
T 4e6p_A          159 KAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLA  238 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999865430         12344455566789999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 041276          224 MPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++.++++|||.|.||||..++
T Consensus       239 s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          239 SAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             SGGGTTCCSCEEEESTTSSCC
T ss_pred             CCccCCCCCCEEEECcChhcC
Confidence            999999999999999998763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-46  Score=309.13  Aligned_cols=228  Identities=25%  Similarity=0.370  Sum_probs=193.2

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.++
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999                   333344444333   446778899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++|
T Consensus       101 ~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  178 (277)
T 3gvc_A          101 F-GGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMS  178 (277)
T ss_dssp             H-SSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHH
Confidence            9 89999999999986 677889999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHH---HHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLE---EVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      |+|++.|+++++.|++++||+||+|+||+++|++.+....  ......   ......|.+++.+|+|+|++++||+++.+
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a  258 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA  258 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCcc
Confidence            9999999999999999999999999999999997543211  001111   11113466788999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 041276          228 SYITGQTICVDGGFTVN  244 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~  244 (251)
                      +++|||.|.||||++..
T Consensus       259 ~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          259 SMITGTTQIADGGTIAA  275 (277)
T ss_dssp             TTCCSCEEEESTTGGGS
T ss_pred             CCccCcEEEECCcchhc
Confidence            99999999999998764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=9.8e-47  Score=308.05  Aligned_cols=233  Identities=24%  Similarity=0.323  Sum_probs=195.1

Q ss_pred             CcccCCCCCEEEEecCCCCcC----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      .+++++++|++|||||++|||                      +.+.++++.+++...+.++.++.+|++|+++++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            456789999999999999999                      3456777788888778899999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+...
T Consensus        84 ~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~  159 (262)
T 3ksu_A           84 FAEKEF-GKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYS  159 (262)
T ss_dssp             HHHHHH-CSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCC
T ss_pred             HHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCc
Confidence            999999 89999999999887 677889999999999999999999999999999943  48999999999999998999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++...... ++.........|.+++.+|+|+|+.++||+++ +
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~  237 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-KESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-G  237 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT-T
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-hHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-C
Confidence            999999999999999999999999999999999999998765432 23344555677899999999999999999999 9


Q ss_pred             CCccccEEEeCCCcccccccc
Q 041276          228 SYITGQTICVDGGFTVNGFFF  248 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~~~~~  248 (251)
                      .++|||.|.||||++..-.+.
T Consensus       238 ~~itG~~i~vdGg~~~~~~~~  258 (262)
T 3ksu_A          238 WWINGQTIFANGGYTTREGHH  258 (262)
T ss_dssp             TTCCSCEEEESTTCCCC----
T ss_pred             CCccCCEEEECCCccCCCccc
Confidence            999999999999998765443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=5.5e-46  Score=308.68  Aligned_cols=235  Identities=18%  Similarity=0.225  Sum_probs=202.2

Q ss_pred             CCcccCCCCCEEEEecCCC--CcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTK--GLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~--giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +..++.+++|++|||||+|  |||                   +.+..+. .+++.+....+.++.+|++|+++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-VDPLAESLGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence            3456778999999999997  999                   1111111 22222222245788999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN  144 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~  144 (251)
                      ++.+++ +++|+||||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+
T Consensus       101 ~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~  177 (296)
T 3k31_A          101 VLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVP  177 (296)
T ss_dssp             HHHHHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCT
T ss_pred             HHHHHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCC
Confidence            999999 899999999998752   267788999999999999999999999999999976  58999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....++.........|.+++.+|+|+|+.++||++
T Consensus       178 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  257 (296)
T 3k31_A          178 HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLS  257 (296)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999987654334555666677899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccccc
Q 041276          225 PAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      +.++++|||.|.||||+++.++.
T Consensus       258 ~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          258 DLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             GGGTTCCSCEEEESTTGGGCSSC
T ss_pred             CccCCccCCEEEECCCccccCCc
Confidence            99999999999999999998765

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.8e-45  Score=305.06  Aligned_cols=232  Identities=19%  Similarity=0.252  Sum_probs=198.1

Q ss_pred             ccCCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +..+++|++|||||+  +|||                  +.+...+..+++.+...++.++.+|++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999  5599                  11222233333333334678899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           72 LFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      ++ +++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+....
T Consensus       106 ~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~  182 (293)
T 3grk_A          106 KW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNV  182 (293)
T ss_dssp             HT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTH
T ss_pred             hc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHH
Confidence            99 899999999998752   356788999999999999999999999999999986  589999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|.+++.+|+|+|+.++||+++.++
T Consensus       183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~  262 (293)
T 3grk_A          183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSR  262 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999999999877655566667777789999999999999999999999999


Q ss_pred             CccccEEEeCCCcccccc
Q 041276          229 YITGQTICVDGGFTVNGF  246 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~~~  246 (251)
                      ++|||.|.||||+++.+.
T Consensus       263 ~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          263 SVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             TCCSCEEEESTTGGGBCC
T ss_pred             CCcceEEEECCCcccCCC
Confidence            999999999999998765

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=4.1e-46  Score=309.15  Aligned_cols=230  Identities=27%  Similarity=0.316  Sum_probs=203.0

Q ss_pred             ccCCCCCEEEEecCCCCcC---------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG---------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +.++++|++|||||++|||                     +...++++.+.+.+.+.++.++.+|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4568999999999999999                     1234555666666667788999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +++ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.++...|+
T Consensus       124 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence            999 899999999998764567889999999999999999999999999999965  38999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.......++....+....|.+++.+|+|+|+.++||+++.++++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  280 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV  280 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999999843322334444555667899999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      |||+|.||||.++.
T Consensus       281 tG~~i~vdGG~~l~  294 (294)
T 3r3s_A          281 TAEVHGVCGGEHLG  294 (294)
T ss_dssp             CSCEEEESTTCCCC
T ss_pred             CCCEEEECCCccCc
Confidence            99999999998763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=9.9e-46  Score=304.93  Aligned_cols=231  Identities=27%  Similarity=0.377  Sum_probs=197.4

Q ss_pred             CcccCCCCCEEEEecCCCCcC------------------c--------------HHHHHHHHHHHHhcCCeeEEEeccCC
Q 041276           10 QDRWSLQGMTALVTGGTKGLG------------------N--------------EAELNECLREWKTKCFKVTGSVCDAS   57 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~D~~   57 (251)
                      ..+.++++|++|||||++|||                  .              .+.++++.+.+...+.++.++.+|++
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            346679999999999999999                  1              34555666666666778889999999


Q ss_pred             CHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecc
Q 041276           58 SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSS  136 (251)
Q Consensus        58 ~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss  136 (251)
                      |+++++++++++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||
T Consensus        88 ~~~~v~~~~~~~~~~~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           88 DDAALRELVADGMEQF-GRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             CHHHHHHHHHHHHHHH-CCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            9999999999999999 89999999999976 66788999999999999999999999999999998875 699999999


Q ss_pred             cccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC------CHHHHHH--HhhCCCCCC
Q 041276          137 VCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS------DEKFLEE--VKCRTPMER  208 (251)
Q Consensus       137 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~------~~~~~~~--~~~~~~~~~  208 (251)
                      .++..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.+....      .+.....  .....|. +
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r  244 (280)
T 3pgx_A          166 SAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-G  244 (280)
T ss_dssp             GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-S
T ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-C
Confidence            99999999999999999999999999999999999999999999999998753100      0000000  1122344 6


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          209 PGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       209 ~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +.+|+|+|+.++||+++.++++|||.|.||||++.
T Consensus       245 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          245 FMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            88999999999999999999999999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=8.1e-46  Score=306.96  Aligned_cols=231  Identities=32%  Similarity=0.466  Sum_probs=204.5

Q ss_pred             cccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ...++++|++|||||++|||                    .....+.+.+.+...+.++.++.+|++|+++++++++++.
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34568999999999999999                    1233444555556667788999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +++ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+....|+
T Consensus       121 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  197 (291)
T 3ijr_A          121 RQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYS  197 (291)
T ss_dssp             HHH-SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHH
Confidence            999 899999999998765667888999999999999999999999999999965  47999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|++++||+||+|+||+++|++..... .++....+....|.+++.+|+|+|+.++||+++.++++
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  276 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYV  276 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            99999999999999999999999999999999999865433 34455666678899999999999999999999999999


Q ss_pred             cccEEEeCCCccccc
Q 041276          231 TGQTICVDGGFTVNG  245 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~  245 (251)
                      |||.|.||||+++.+
T Consensus       277 tG~~i~vdGG~~~~g  291 (291)
T 3ijr_A          277 TGQMIHVNGGVIVNG  291 (291)
T ss_dssp             CSCEEEESSSCCCCC
T ss_pred             cCCEEEECCCcccCC
Confidence            999999999998864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1e-45  Score=302.51  Aligned_cols=227  Identities=28%  Similarity=0.447  Sum_probs=202.7

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE-------------EeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG-------------SVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~-------------~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      .++++++|+||||||++|||     .++++.+.+.|.++..             +.+|+++.++++++++++.+.+ +++
T Consensus        22 ~m~~l~gk~vlVTGas~gIG-----~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~i   95 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIG-----GAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGL-GRL   95 (266)
T ss_dssp             ----CTTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             hhhCCCCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhc-CCC
Confidence            46778999999999999999     8899999888766543             3689999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||+|++
T Consensus        96 D~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  174 (266)
T 3uxy_A           96 DIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALA  174 (266)
T ss_dssp             CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHH
Confidence            99999999987 67788999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCC-----CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPY-----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      .|+++++.|++++||+||+|+||+++|++.+..     ...++....+....|.+++.+|+|+|+.+++|+++.++++||
T Consensus       175 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG  254 (266)
T 3uxy_A          175 SLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCG  254 (266)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999999999999999986432     122344466677889999999999999999999999999999


Q ss_pred             cEEEeCCCcccc
Q 041276          233 QTICVDGGFTVN  244 (251)
Q Consensus       233 ~~i~vdgG~~~~  244 (251)
                      |.|.||||.++.
T Consensus       255 ~~i~vdGG~~~s  266 (266)
T 3uxy_A          255 SLVEVNGGKAVA  266 (266)
T ss_dssp             CEEEESTTCCCC
T ss_pred             CEEEECcCEeCC
Confidence            999999998763

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=7.6e-46  Score=303.84  Aligned_cols=232  Identities=28%  Similarity=0.431  Sum_probs=204.4

Q ss_pred             CCCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE--------------EEeccCCCHHHHHHHHHHHHHhc
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT--------------GSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~--------------~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.....++++|+||||||++|||     .++++.+.+.|.++.              .+.+|++|+++++++++++.+.+
T Consensus         5 ~~~~~~~~~~k~vlVTGas~GIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A            5 HHHHMEEFTDKVAIVTGGSSGIG-----LAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             -----CTTTTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            44566788999999999999999     888888887776543              46799999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||
T Consensus        80 -g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (269)
T 3vtz_A           80 -GRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSK  157 (269)
T ss_dssp             -SCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHH
Confidence             89999999999876 6778899999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC------CC---HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL------SD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +|++.|+++++.|+++ +|+||+|+||+++|++.....      ..   ++..+.+....|.+++.+|+|+|+.++||++
T Consensus       158 aa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  236 (269)
T 3vtz_A          158 HALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLAS  236 (269)
T ss_dssp             HHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999988 899999999999999864321      01   3445556667899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccccccc
Q 041276          225 PAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      +.+.++|||.|.||||+++....
T Consensus       237 ~~~~~itG~~i~vdGG~~~~~~~  259 (269)
T 3vtz_A          237 DRSSFITGACLTVDGGLLSKLPI  259 (269)
T ss_dssp             GGGTTCCSCEEEESTTGGGBCCC
T ss_pred             CccCCCcCcEEEECCCccccCCC
Confidence            99999999999999999876543

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6e-46  Score=302.92  Aligned_cols=231  Identities=24%  Similarity=0.336  Sum_probs=188.5

Q ss_pred             ccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ++++++|++|||||++|||                    +.+.+++..+++.+.+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999                    33445566666666677888999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYA  150 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~  150 (251)
                      ++ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++. .+.++...|+
T Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~  159 (259)
T 3edm_A           83 KF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA  159 (259)
T ss_dssp             HH-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred             Hh-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence            99 899999999998754778889999999999999999999999999999976  4899999999998 6788899999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|+++. |+||+|+||+++|++.+.... ++..+.+....|.+++.+|+|+|+.++||+++.+.++
T Consensus       160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i  237 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYV  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999886 999999999999999876543 3445556667899999999999999999999999999


Q ss_pred             cccEEEeCCCccccccc
Q 041276          231 TGQTICVDGGFTVNGFF  247 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~~  247 (251)
                      |||.|.||||.+.....
T Consensus       238 tG~~i~vdGg~~~~~~~  254 (259)
T 3edm_A          238 TGACYDINGGVLFSEGH  254 (259)
T ss_dssp             CSCEEEESBCSSBC---
T ss_pred             cCCEEEECCCcCCCCCC
Confidence            99999999999876543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.8e-45  Score=297.28  Aligned_cols=233  Identities=55%  Similarity=0.928  Sum_probs=205.0

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999                   45556666677766667888999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++
T Consensus        83 ~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGA  161 (260)
T ss_dssp             HTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHH
Confidence            87458999999999875 66778899999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH---HHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE---EVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      ||++++.|+++++.|++++||+||+|+||+++|++.......+...+   .+....|.+++.+|+|+|+.+++|+++.+.
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~  241 (260)
T 2ae2_A          162 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999998654333333323   455667889999999999999999999899


Q ss_pred             CccccEEEeCCCcccc
Q 041276          229 YITGQTICVDGGFTVN  244 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~  244 (251)
                      +++|+.+.+|||..+.
T Consensus       242 ~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          242 YVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCCCCEEEECCCcccc
Confidence            9999999999998753

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3.6e-45  Score=300.19  Aligned_cols=230  Identities=31%  Similarity=0.439  Sum_probs=200.4

Q ss_pred             CcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+.+++++|+||||||++|||                    +.+..+++.+.+.+.+.++.++.+|+++.++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            346678999999999999999                    344455666667777778999999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|
T Consensus       102 ~~~~-g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (271)
T 4iin_A          102 VQSD-GGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNY  179 (271)
T ss_dssp             HHHH-SSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHhc-CCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHh
Confidence            9999 89999999999887 667788999999999999999999999999999999888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+...  ++....+....|.+++.+|+|+|+++++|+++.+.+
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~  257 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK--DELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSY  257 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCC
Confidence            999999999999999999999999999999999999987653  234455566789999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +|||.|.+|||+.|
T Consensus       258 itG~~i~vdGG~~~  271 (271)
T 4iin_A          258 ITGETLKVNGGLYM  271 (271)
T ss_dssp             CCSCEEEESTTSCC
T ss_pred             CcCCEEEeCCCeeC
Confidence            99999999999875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4e-45  Score=299.62  Aligned_cols=234  Identities=25%  Similarity=0.409  Sum_probs=199.8

Q ss_pred             CCCcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +..+...+++|++|||||++|||                    +.+.+++..+.+...+.++.++.+|++|+++++++++
T Consensus        16 ~~~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   95 (269)
T 3gk3_A           16 TQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAE   95 (269)
T ss_dssp             --------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             cCCchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            33344457899999999999999                    3344555555666666788899999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++.+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++..
T Consensus        96 ~~~~~~-g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  173 (269)
T 3gk3_A           96 KVLADF-GKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQA  173 (269)
T ss_dssp             HHHHHH-SCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBH
T ss_pred             HHHHHc-CCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcc
Confidence            999999 89999999999876 6678889999999999999999999999999999988889999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .|++||+|++.|+++++.|++++||+||.|+||+++|++.+..... .....+....|.+++.+|+|+|+.+++|+++.+
T Consensus       174 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~  252 (269)
T 3gk3_A          174 NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-VLEAKILPQIPVGRLGRPDEVAALIAFLCSDDA  252 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-HHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999999998765322 112134556788999999999999999999999


Q ss_pred             CCccccEEEeCCCcccc
Q 041276          228 SYITGQTICVDGGFTVN  244 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~  244 (251)
                      .++|||.|.||||+.++
T Consensus       253 ~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          253 GFVTGADLAINGGMHMS  269 (269)
T ss_dssp             TTCCSCEEEESTTSCCC
T ss_pred             CCeeCcEEEECCCEeCc
Confidence            99999999999998763

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.6e-45  Score=305.34  Aligned_cols=231  Identities=30%  Similarity=0.401  Sum_probs=199.5

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------c------------HHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------N------------EAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      .+.++++|+||||||++|||                   +            .+.+++..+.+.+.+.++.++.+|++|+
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            46678999999999999999                   1            4556666667777777888999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccc
Q 041276           60 AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVC  138 (251)
Q Consensus        60 ~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~  138 (251)
                      ++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.+
T Consensus       120 ~~v~~~~~~~~~~~-g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          120 ASLQAVVDEALAEF-GHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            99999999999999 89999999999876 66788999999999999999999999999999998875 68999999999


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC-----------CCCH-HHHHHH--hhCC
Q 041276          139 GVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY-----------LSDE-KFLEEV--KCRT  204 (251)
Q Consensus       139 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~-----------~~~~-~~~~~~--~~~~  204 (251)
                      +..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++....           .... +..+.+  ....
T Consensus       198 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          198 GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccC
Confidence            9999999999999999999999999999999999999999999999975320           0111 112211  1233


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      | .++.+|+|+|++++||+++.++++|||.|.||||++++
T Consensus       278 p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          278 P-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             S-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             C-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            4 67889999999999999999999999999999999875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-45  Score=299.00  Aligned_cols=232  Identities=25%  Similarity=0.402  Sum_probs=201.8

Q ss_pred             CCCcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +..+...+++|+||||||++|||                    +....++..+.+.+.+.++.++.+|++|.++++++++
T Consensus         4 ~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (256)
T 3ezl_A            4 HHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD   83 (256)
T ss_dssp             ---------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHH
Confidence            34556678999999999999999                    1223344455555556678888999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++.+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++..
T Consensus        84 ~~~~~~-g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (256)
T 3ezl_A           84 KVKAEV-GEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQT  161 (256)
T ss_dssp             HHHHHT-CCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCH
T ss_pred             HHHHhc-CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCc
Confidence            999999 89999999999876 6678899999999999999999999999999999998889999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .|++||+|++.|+++++.|++++||+||.|+||+++|++.+..  .++....+....|.+++.+|+|+|+.++||+++++
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  239 (256)
T 3ezl_A          162 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEES  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999998765  35566677777899999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 041276          228 SYITGQTICVDGGFTV  243 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~  243 (251)
                      .++|||.|.+|||+.+
T Consensus       240 ~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          240 GFSTGADFSLNGGLHM  255 (256)
T ss_dssp             TTCCSCEEEESTTSCC
T ss_pred             cCCcCcEEEECCCEeC
Confidence            9999999999999976

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=7e-45  Score=296.85  Aligned_cols=231  Identities=29%  Similarity=0.420  Sum_probs=186.0

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            35788999999999999999                   333444444433   34678899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC----CceEEEecccccccCCCCCh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG----AGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~----~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++ +++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++    .++||++||..+..+.+...
T Consensus        80 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           80 KF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             HH-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCH
T ss_pred             hc-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCcc
Confidence            99 89999999999876566777889999999999999999999999999998763    57899999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.+....  .++....+....|.+++.+|+|+|+.+++|+++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  238 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999999876542  244556666778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccccc
Q 041276          226 AASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~~  245 (251)
                      .++++|||.|.+|||.++.+
T Consensus       239 ~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          239 QASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             GGTTCCSCEEEESTTTTC--
T ss_pred             cccCcCCcEEEecCCcccCC
Confidence            99999999999999998865

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-45  Score=299.44  Aligned_cols=226  Identities=27%  Similarity=0.441  Sum_probs=202.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            47899999999999999                   4556667777777667788999999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||+
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  162 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  162 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence            89999999999873366788899999999999999999999999999999887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC------------CC-CHH-HHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY------------LS-DEK-FLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      ++..|+++++.|++++||+||+|+||+++|++....            .. .++ ..+.+....|.+++.+|+|+|+.++
T Consensus       163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  242 (262)
T 1zem_A          163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  242 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999986432            12 233 4455556789999999999999999


Q ss_pred             HHcCCCCCCccccEEEeCCC
Q 041276          221 FLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG  240 (251)
                      ||+++.++++|||.|.+|||
T Consensus       243 ~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          243 FLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHcCchhcCcCCcEEecCCC
Confidence            99999999999999999998

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=9.2e-45  Score=293.76  Aligned_cols=225  Identities=30%  Similarity=0.473  Sum_probs=200.9

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++|++|||||++|||                    +.++++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999999999999                    3445566666666666678899999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++||+
T Consensus        81 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           81 GQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence            89999999999875 66778899999999999999999999999999999887899999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.|+++++.|++++||+||+|+||+++|++.....  +.....+....|.+++.+|+|+|+.+++|+++.+++++|+.
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  237 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQT  237 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCE
Confidence            9999999999999999999999999999999976542  23334455567888999999999999999999899999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      +.+|||+++
T Consensus       238 ~~vdgG~~~  246 (246)
T 2uvd_A          238 LNVDGGMVM  246 (246)
T ss_dssp             EEESTTSCC
T ss_pred             EEECcCccC
Confidence            999999763

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.9e-46  Score=307.18  Aligned_cols=227  Identities=26%  Similarity=0.389  Sum_probs=200.1

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999                   334455666666666778889999999999999999999876


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                        +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++|
T Consensus       108 --g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  184 (275)
T 4imr_A          108 --APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAAT  184 (275)
T ss_dssp             --SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             --CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHH
Confidence              69999999999876 667889999999999999999999999999999999888999999999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCC-CCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRT-PMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      |+|++.|+++++.|++++||+||+|+||+++|++...... .++....+.... |.+++.+|+|+|++++||+++.++++
T Consensus       185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~i  264 (275)
T 4imr_A          185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFM  264 (275)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCC
Confidence            9999999999999999999999999999999998654321 233444444444 89999999999999999999999999


Q ss_pred             cccEEEeCCCc
Q 041276          231 TGQTICVDGGF  241 (251)
Q Consensus       231 ~G~~i~vdgG~  241 (251)
                      |||.|.||||+
T Consensus       265 tG~~i~vdGG~  275 (275)
T 4imr_A          265 TGETIFLTGGY  275 (275)
T ss_dssp             CSCEEEESSCC
T ss_pred             CCCEEEeCCCC
Confidence            99999999995

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-45  Score=300.53  Aligned_cols=233  Identities=28%  Similarity=0.410  Sum_probs=201.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ...++++|++|||||++|||                   +.+.++++.+++.+.  +.++.++.+|++|+++++++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            34568999999999999999                   445566666666554  567889999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+ +++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|
T Consensus        87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           87 TERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence            9999 899999999998763267788999999999999999999999999999998878999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----CCC--HHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----LSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ++||++++.|+++++.|++++||+||+|+||+++|++....    .+.  +...+.+....|.+++.+|+|+|+.+++|+
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~  245 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999986431    111  111224556678899999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 041276          224 MPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++.+++++|+.|.+|||+++.
T Consensus       246 s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          246 SDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             SGGGTTCCSCEEEESTTTTTB
T ss_pred             CccccCCCCCEEEECCCcccC
Confidence            998999999999999998753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.7e-44  Score=293.40  Aligned_cols=231  Identities=26%  Similarity=0.378  Sum_probs=196.8

Q ss_pred             CCcccCCCCCEEEEecCC-CCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGT-KGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas-~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ...+..+++|++|||||+ +|||                   +.+.+++..+++.+.+ .++.++.+|++|+++++++++
T Consensus        14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (266)
T 3o38_A           14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT   93 (266)
T ss_dssp             CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH
Confidence            445667899999999998 5999                   4566667777776553 578999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLG  146 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~  146 (251)
                      ++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|+++ +.++||++||..+..+.++.
T Consensus        94 ~~~~~~-g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  171 (266)
T 3o38_A           94 QTVEKA-GRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ  171 (266)
T ss_dssp             HHHHHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC
T ss_pred             HHHHHh-CCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC
Confidence            999999 89999999999876 6778899999999999999999999999999999987 66899999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.... ++....+....|.+++.+|+|+|+.++||+++.
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~  250 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASDY  250 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999999876543 344556667789999999999999999999999


Q ss_pred             CCCccccEEEeCCCcc
Q 041276          227 ASYITGQTICVDGGFT  242 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~  242 (251)
                      ++++|||+|.||||++
T Consensus       251 ~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          251 SSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             GTTCCSCEEEESSCCC
T ss_pred             ccCccCCEEEEcCCcC
Confidence            9999999999999974

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.1e-44  Score=295.57  Aligned_cols=228  Identities=29%  Similarity=0.437  Sum_probs=193.1

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHH-HHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAE-LNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++|++|||||++|||                   +.+. ++++.+++... +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999                   3344 56666666554 5678899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|++||
T Consensus        82 -g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 -GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             -SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence             89999999999876 5677889999999999999999999999999999988789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---------HHHHHHH-hhCCCCCCCCCHHHHHHHHHHHc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---------EKFLEEV-KCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ++++.|+++++.|++++||+||+|+||+++|++.+.....         ++....+ ....|.+++.+|+|+|+.+++|+
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~  239 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA  239 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999987653221         1222222 34468889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 041276          224 MPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++.+++++|+.+.+|||++++
T Consensus       240 s~~~~~~tG~~~~vdgG~~~~  260 (260)
T 1x1t_A          240 SDAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             ChhhcCCCCCEEEECCCccCC
Confidence            998999999999999998753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2e-44  Score=298.60  Aligned_cols=228  Identities=27%  Similarity=0.334  Sum_probs=198.0

Q ss_pred             cccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHH-hcCCeeEEEeccCCCHH---------
Q 041276           11 DRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWK-TKCFKVTGSVCDASSRA---------   60 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~---------   60 (251)
                      .++++++|++|||||++|||                    +.+.++++.+++. ..+.++.++.+|+++++         
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            45678999999999999999                    2345555666665 44567889999999999         


Q ss_pred             --------HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCC--------------HHHHHHHHHhhhHHHHHHHHH
Q 041276           61 --------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM--------------AEDLSFLMSTNFESAYHLSQL  118 (251)
Q Consensus        61 --------~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~  118 (251)
                              +++++++++.+.+ +++|+||||||... ..++.+.+              .++|++.+++|+.+++.+++.
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                    9999999999999 89999999999876 56677778              999999999999999999999


Q ss_pred             HHHHHHhCC------CceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC
Q 041276          119 AHPLLKASG------AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS  192 (251)
Q Consensus       119 ~~~~m~~~~------~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~  192 (251)
                      ++|+|++++      .|+||++||..+..+.++...|++||+++..|+++++.|++++||+||+|+||+++|++ + . .
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~-~  237 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M-P  237 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S-C
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C-C
Confidence            999999877      69999999999999999999999999999999999999999999999999999999999 4 3 2


Q ss_pred             CHHHHHHHhhCCCCC-CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          193 DEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                       ++....+....|.+ ++.+|+|+|+.+++|+++.+.++||+.|.+|||+++.
T Consensus       238 -~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          238 -PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             -HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence             55556666678888 9999999999999999999999999999999998763

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=7.7e-45  Score=296.21  Aligned_cols=226  Identities=28%  Similarity=0.400  Sum_probs=199.8

Q ss_pred             CCEEEEecCCCCcC-------------------cHHH--HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLG-------------------NEAE--LNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +|++|||||++|||                   +.+.  ++++.+++...+.++.++.+|++|+++++++++++.+.+ +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-G   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            69999999999999                   2333  566666776666788999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEecccccccCCCCChhhHHhHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++. |+||++||.++..+.+....|++||+
T Consensus        81 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C           81 GFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF  159 (258)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence            9999999999876 667888999999999999999999999999999998776 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------C-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------S-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +++.|+++++.|++++||+||+|+||+++|++.....        . .++....+....|.+++.+|+|+|+.+++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  239 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE  239 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999865321        1 133344555667889999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 041276          226 AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+++++|+.|.+|||+.++
T Consensus       240 ~~~~~tG~~i~vdGG~~~~  258 (258)
T 3a28_C          240 NSNYVTGQVMLVDGGMLYN  258 (258)
T ss_dssp             GGTTCCSCEEEESSSSCCC
T ss_pred             ccCCCCCCEEEECCCEecC
Confidence            9999999999999998753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.3e-45  Score=299.41  Aligned_cols=228  Identities=26%  Similarity=0.367  Sum_probs=192.8

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------c------------HHHHHHHHHHHHhcCCeeEEEeccCCC
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------N------------EAELNECLREWKTKCFKVTGSVCDASS   58 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~   58 (251)
                      ....++++|+||||||++|||                   +            .+.+++..+.+...+.++.++.+|++|
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   85 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD   85 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            345678999999999999999                   2            556666666676667788999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccc
Q 041276           59 RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSV  137 (251)
Q Consensus        59 ~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~  137 (251)
                      +++++++++++.+.+ +++|+||||||+.. ...    +.++|++.+++|+.+++.++++++|+|++++ .|+||++||.
T Consensus        86 ~~~v~~~~~~~~~~~-g~id~lv~nAg~~~-~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  159 (278)
T 3sx2_A           86 RESLSAALQAGLDEL-GRLDIVVANAGIAP-MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHHHH-CCCCEEEECCCCCC-CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHc-CCCCEEEECCCCCC-CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence            999999999999999 89999999999865 222    5899999999999999999999999998865 6899999999


Q ss_pred             ccccCC----CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHH---------HhhCC
Q 041276          138 CGVLST----NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE---------VKCRT  204 (251)
Q Consensus       138 ~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~---------~~~~~  204 (251)
                      ++..+.    ++...|++||+|++.|+++++.|++++||+||+|+||+++|++.......+.....         .....
T Consensus       160 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (278)
T 3sx2_A          160 AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM  239 (278)
T ss_dssp             GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred             HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence            998876    66778999999999999999999999999999999999999997642211111111         12234


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          205 PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      | +++.+|+|+|+.++||+++.++++|||.|.||||++++
T Consensus       240 p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k  278 (278)
T 3sx2_A          240 P-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK  278 (278)
T ss_dssp             S-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred             C-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence            5 67889999999999999999999999999999999764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.2e-44  Score=292.25  Aligned_cols=225  Identities=25%  Similarity=0.324  Sum_probs=183.5

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee--------------EEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV--------------TGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~--------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +++++|++|||||++|||     .++++.+.+.|.++              .++.+|++|+++++++++++.+++ +++|
T Consensus         3 m~l~~k~vlVTGas~giG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~id   76 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIG-----YATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAET-ERLD   76 (250)
T ss_dssp             CCCTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred             CCCCCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            457899999999999999     88888888776554              346789999999999999999999 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      +||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||++++.
T Consensus        77 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  155 (250)
T 2fwm_X           77 ALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKS  155 (250)
T ss_dssp             EEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHH
Confidence            9999999876 667788999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH-HHhh-------CCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE-EVKC-------RTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      |+++++.|++++||+||+|+||+++|++.......++..+ .+..       ..|.+++.+|+|+|+.+++|+++.++++
T Consensus       156 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  235 (250)
T 2fwm_X          156 LALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHI  235 (250)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999998765321111112 2222       4678889999999999999999989999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      +||.|.+|||+++.
T Consensus       236 tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          236 TLQDIVVDGGSTLG  249 (250)
T ss_dssp             CSCEEEESTTTTTT
T ss_pred             CCCEEEECCCcccC
Confidence            99999999998764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=3.3e-45  Score=299.84  Aligned_cols=226  Identities=27%  Similarity=0.384  Sum_probs=195.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.+++|++|||||++|||                   +.+.+++..+++...  +..+.++.+|++++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            468899999999999999                   455666667777655  3567889999999999887765    


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      ++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++
T Consensus        82 ~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  159 (267)
T 3t4x_A           82 KY-PKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSA  159 (267)
T ss_dssp             HC-CCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hc-CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHH
Confidence            45 89999999999886 66788999999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---------CCCHHH----HHHHhhCCCCCCCCCHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---------LSDEKF----LEEVKCRTPMERPGEPKEVSSL  218 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~~~dva~~  218 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+..         ...++.    ........|.+++.+|+|+|++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~  239 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHL  239 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHH
Confidence            999999999999999999999999999999999865321         111222    2222334678999999999999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCcccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++||+++.++++|||.|.||||++.+
T Consensus       240 v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          240 VTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHcCccccCccCCeEEECCCcccc
Confidence            99999999999999999999998765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.4e-44  Score=295.04  Aligned_cols=235  Identities=30%  Similarity=0.464  Sum_probs=203.4

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +.....+++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++
T Consensus         6 ~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (260)
T 2zat_A            6 VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMA   85 (260)
T ss_dssp             ----CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            3445568999999999999999                   445566666777666677889999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|
T Consensus        86 ~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  164 (260)
T 2zat_A           86 VNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPY  164 (260)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhH
Confidence            9999 899999999998653456778999999999999999999999999999998888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||++++.|+++++.|++++||+||.|+||+++|++.......+.....+....|.+++.+|+|+|+.+++|+++.+++
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~  244 (260)
T 2zat_A          165 NVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASY  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999999986542223333333444568889999999999999999998999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      ++|+.+.+|||...+
T Consensus       245 ~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          245 ITGETVVVGGGTASR  259 (260)
T ss_dssp             CCSCEEEESTTCCCC
T ss_pred             ccCCEEEECCCcccc
Confidence            999999999998653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-44  Score=297.03  Aligned_cols=230  Identities=30%  Similarity=0.441  Sum_probs=199.9

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +.+++++++|++|||||++|||                   +.+.++++.+++...+ ++.++.+|++|+++++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHH
Confidence            4456778999999999999999                   3445555566665444 6888899999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC----ceEEEecccccccCCCC
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA----GNIILVSSVCGVLSTNL  145 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~----g~iv~vss~~~~~~~~~  145 (251)
                      .+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.    |+||++||.++..+.+.
T Consensus       100 ~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A          100 GELS-ARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             HHHC-SCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC
T ss_pred             HHhc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC
Confidence            9999 89999999999876 567788999999999999999999999999999988765    89999999999998888


Q ss_pred             Ch-hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh--CCCCCCCCCHHHHHHHHHHH
Q 041276          146 GT-IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC--RTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       146 ~~-~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l  222 (251)
                      .. .|++||++++.|+++++.|++++||+||+|+||+++|++.......  ....+..  ..|.+++.+|+|+|+.+++|
T Consensus       178 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  255 (276)
T 2b4q_A          178 QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPEEMAALAISL  255 (276)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHHHHHHHHTSTTSSCCCHHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHHHHHhhcCCCCCCcCCHHHHHHHHHHH
Confidence            88 9999999999999999999999999999999999999986532111  2233334  67889999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 041276          223 CMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++.+++++||.|.+|||+++
T Consensus       256 ~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          256 AGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HSGGGTTCCSCEEEESTTTTC
T ss_pred             hCccccCCCCCEEEeCCCccC
Confidence            999899999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=4.7e-44  Score=292.99  Aligned_cols=228  Identities=28%  Similarity=0.361  Sum_probs=203.7

Q ss_pred             CcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..+.++.+|+||||||++|||                    +...+++..+++.+.+.++.++.+|++|+++++++++++
T Consensus        19 ~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           19 YFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            345567899999999999999                    455666777777777778899999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hCCCceEEEecccccccCCCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      .+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|. +++.|+||++||.++..+.++...
T Consensus        99 ~~~~-g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (267)
T 4iiu_A           99 IAQH-GAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVN  176 (267)
T ss_dssp             HHHH-CCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHh-CCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCch
Confidence            9999 89999999999886 67788899999999999999999999999999886 566799999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||+|++.|+++++.|++++||+|+.|+||+++|++.+..   ++.........|.+++.+|+|+|+.+++|+++.+.
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~  253 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAG  253 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999999998653   56666777788999999999999999999999999


Q ss_pred             CccccEEEeCCCcc
Q 041276          229 YITGQTICVDGGFT  242 (251)
Q Consensus       229 ~~~G~~i~vdgG~~  242 (251)
                      ++|||.|.+|||+.
T Consensus       254 ~itG~~i~vdGG~~  267 (267)
T 4iiu_A          254 YVTRQVISINGGML  267 (267)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             CccCCEEEeCCCcC
Confidence            99999999999973

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.2e-44  Score=296.96  Aligned_cols=229  Identities=27%  Similarity=0.386  Sum_probs=192.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++++|++|||||++|||                   +.+.++++.+.   .+.++.++.+|++++++++++++++.+.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999                   22333332222   23467888999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCC----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           74 NGKLNILINNVGTNYTTKPT----VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                       +++|+||||||+.....++    .+.+.+.|++.+++|+.+++.++++++|+|++++ |+||++||..+..+.+....|
T Consensus        78 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y  155 (281)
T 3zv4_A           78 -GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY  155 (281)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHH
T ss_pred             -CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchh
Confidence             8999999999986533333    2455678999999999999999999999998765 999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--------CHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--------DEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      ++||+|++.|+++++.|++++ |+||+|+||+++|+|......        ..+..+.+....|.+++.+|+|+|+.++|
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  234 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987 999999999999998754321        11244556678899999999999999999


Q ss_pred             HcC-CCCCCccccEEEeCCCccccccc
Q 041276          222 LCM-PAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       222 l~~-~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      |++ +.+.++|||.|.||||+++.++.
T Consensus       235 L~s~~~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          235 FATRGDSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             HHSTTTSTTCSSCEEEESSSGGGCCSS
T ss_pred             hhcccccccccCcEEEECCCCccccch
Confidence            999 78899999999999999998764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=287.26  Aligned_cols=221  Identities=28%  Similarity=0.424  Sum_probs=195.6

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------eEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-------------------VTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||     .++++.+.+.|.+                   +.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlVTGas~giG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIG-----RATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL-   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            47899999999999999     4444444443322                   5567899999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.+ ..+.+....|++||+
T Consensus        76 g~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~  153 (245)
T 1uls_A           76 GRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA  153 (245)
T ss_dssp             SSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence            89999999999876 6677889999999999999999999999999999988889999999999 888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      ++..|+++++.|++++||+||+|+||+++|++....  .++....+....|.+++.+|+|+|+.+++|+++.+.+++||.
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  231 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV  231 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCE
Confidence            999999999999999999999999999999997654  234445556678889999999999999999999899999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      +.+|||+.+.
T Consensus       232 ~~vdgG~~~~  241 (245)
T 1uls_A          232 LFVDGGRTIG  241 (245)
T ss_dssp             EEESTTTTTT
T ss_pred             EEECCCcccC
Confidence            9999998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.1e-45  Score=295.92  Aligned_cols=221  Identities=23%  Similarity=0.343  Sum_probs=184.5

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------------eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------------KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++++|++|||||++|||     .++++.+.+.|.                     ++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLG-----AAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            468899999999999999     555555554432                     456778999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCC----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCceEEEeccccccc
Q 041276           72 LFNGKLNILINNVGTNYTTKPT----VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS------GAGNIILVSSVCGVL  141 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~~g~iv~vss~~~~~  141 (251)
                      ++ +++|+||||||... ..++    .+.+.++|++.+++|+.+++.++++++|+|+++      +.|+||++||.++..
T Consensus        78 ~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           78 EF-GHVHGLVNCAGTAP-GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             HH-SCCCEEEECCCCCC-CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             Hc-CCCCEEEECCCCCC-CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence            99 89999999999876 3332    367899999999999999999999999999985      568999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVA  220 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~  220 (251)
                      +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+...  ++..+.+....|. +++.+|+|+|+.++
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~~r~~~~~dva~~v~  233 (257)
T 3tpc_A          156 GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAEEYAALVK  233 (257)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987653  2344555667788 89999999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCcccc
Q 041276          221 FLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +|+++  .++|||.|.||||+++.
T Consensus       234 ~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          234 HICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHccc--CCcCCcEEEECCCccCC
Confidence            99975  78999999999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-44  Score=291.49  Aligned_cols=221  Identities=23%  Similarity=0.257  Sum_probs=190.8

Q ss_pred             CCEEEEecCCCCcC---------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG---------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +|++|||||++|||                     +.+.++++.+++   +.++.++.+|++|+++++++++++.+++ +
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence            69999999999999                     222233333322   3467889999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||...+..++.+.+.++|++.+++|+.+++.++++++|+|++++ |+||++||.++..+.++...|++||+|
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            9999999999876457888999999999999999999999999999999876 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-------CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC-C
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA-A  227 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~  227 (251)
                      ++.|+++++.|+  +||+||+|+||+++|++.+....       .++....+....|.+++.+|+|+|+.+++|+++. +
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~  234 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP  234 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence            999999999997  68999999999999999876532       3556666777789999999999999999999998 5


Q ss_pred             CCccccEEEeCCCcccc
Q 041276          228 SYITGQTICVDGGFTVN  244 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~  244 (251)
                      +++|||.|.+|||....
T Consensus       235 ~~itG~~i~vdg~~~~~  251 (254)
T 3kzv_A          235 DGVNGQYLSYNDPALAD  251 (254)
T ss_dssp             GGGTTCEEETTCGGGGG
T ss_pred             CCCCccEEEecCccccc
Confidence            99999999999998643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=4.4e-44  Score=293.06  Aligned_cols=229  Identities=27%  Similarity=0.474  Sum_probs=201.7

Q ss_pred             cccCCCCCEEEEecCC--CCcC--------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGT--KGLG--------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        11 ~~~~l~~k~vlItGas--~giG--------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +++++++|++|||||+  +|||                    +....++..+++.+ .+.++.++.+|++|+++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            3567899999999999  9999                    11122344444433 25678889999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--CC
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--NL  145 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--~~  145 (251)
                      ++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.  +.
T Consensus        94 ~~~~~~-g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  171 (267)
T 3gdg_A           94 DVVADF-GQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQE  171 (267)
T ss_dssp             HHHHHT-SCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSC
T ss_pred             HHHHHc-CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCC
Confidence            999999 89999999999876 666788999999999999999999999999999999888999999999998776  56


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ...|++||+|++.|+++++.|+++. |+||+|+||+++|++.+..  .++....+....|.+++.+|+|+|+.+++|+++
T Consensus       172 ~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~  248 (267)
T 3gdg_A          172 QTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASD  248 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHST
T ss_pred             CCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecC
Confidence            8899999999999999999999887 9999999999999998754  455666777789999999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccc
Q 041276          226 AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+.++|||.|.+|||++++
T Consensus       249 ~~~~itG~~i~vdgG~~~r  267 (267)
T 3gdg_A          249 ASTYTTGADLLIDGGYTTR  267 (267)
T ss_dssp             TCTTCCSCEEEESTTGGGC
T ss_pred             ccccccCCEEEECCceecC
Confidence            9999999999999999874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.9e-44  Score=293.58  Aligned_cols=230  Identities=31%  Similarity=0.476  Sum_probs=200.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++++|++|||||++|||                   +.++++++.+++... +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999                   445566666666554 567889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++|
T Consensus        83 ~-g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           83 F-GGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             H-SSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            9 89999999999876 667788999999999999999999999999999998878999999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---------CHHHHHHHhhC-CCCCCCCCHHHHHHHHHHH
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---------DEKFLEEVKCR-TPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l  222 (251)
                      |++++.++++++.|++++||+||+|+||++.|++......         .++....+... .|.+++.+|+|+|+.+++|
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  240 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFL  240 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999997543211         12223334344 7888999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccc
Q 041276          223 CMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++.+++++|+.+.+|||..+.
T Consensus       241 ~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          241 CSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             TSTTCTTCCSCEEEESTTCCCC
T ss_pred             cCccccCCCCcEEEECCCcccc
Confidence            9998999999999999998753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-44  Score=293.18  Aligned_cols=225  Identities=25%  Similarity=0.349  Sum_probs=199.1

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            68999999999999                   4555666667776666678899999999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      |+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ .|+||++||.++..+.+....|++||+++
T Consensus        81 d~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           81 DVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             CEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            99999999875 56778899999999999999999999999999999876 69999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      +.|+++++.|++++||+||+|+||+++|++.....         ..++....+....|.+++.+|+|+|+.+++|+++.+
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  239 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS  239 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999854321         012233445566788999999999999999999989


Q ss_pred             CCccccEEEeCCCccc
Q 041276          228 SYITGQTICVDGGFTV  243 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~  243 (251)
                      ++++||.|.+|||+++
T Consensus       240 ~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          240 DYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TTCCSCEEEESSSSSC
T ss_pred             cCCCCCEEEeCCCccC
Confidence            9999999999999865

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=4.9e-44  Score=289.99  Aligned_cols=223  Identities=32%  Similarity=0.432  Sum_probs=185.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cH-HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NE-AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++|||||++|||                   +. +.+++   .+.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47899999999999999                   11 22222   333345578889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||
T Consensus        81 -g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           81 -GRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             -SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence             89999999999876 5677889999999999999999999999999999988789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC-CCCCC-HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE-PYLSD-EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ++++.|+++++.|++++||+||+|+||+++|++.. ..... ++....+.  .|.+++.+|+|+|+.+++|+++.+++++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~t  236 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFIT  236 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCCC
Confidence            99999999999999999999999999999999876 32211 11111111  5788899999999999999999899999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |+.+.+|||++.
T Consensus       237 G~~~~vdGG~~~  248 (249)
T 2ew8_A          237 GQTLAVDGGMVR  248 (249)
T ss_dssp             SCEEEESSSCCC
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=5.8e-44  Score=289.26  Aligned_cols=226  Identities=27%  Similarity=0.431  Sum_probs=194.2

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE-------------EeccCCCHHHHHHHHHHHHHhcCC
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG-------------SVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~-------------~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      ....+++++|++|||||++|||     .++++.+.+.|.++..             +.+|++|+++++++++++.+.+ +
T Consensus         7 ~~~~~~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   80 (247)
T 1uzm_A            7 EGAKPPFVSRSVLVTGGNRGIG-----LAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQ-G   80 (247)
T ss_dssp             --CCCCCCCCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CcccccCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHc-C
Confidence            3345678999999999999999     8889998888766654             5789999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||++
T Consensus        81 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  159 (247)
T 1uzm_A           81 PVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG  159 (247)
T ss_dssp             SCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHH
Confidence            9999999999875 667788999999999999999999999999999998888999999999999998899999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.|+++++.|++++||+||.|+||+++|++.+..  .+.....+....|.+++.+|+|+|+.+++|+++.+.+++|+.|
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i  237 (247)
T 1uzm_A          160 VIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI  237 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEE
Confidence            99999999999999999999999999999986543  2344455556678889999999999999999988899999999


Q ss_pred             EeCCCccc
Q 041276          236 CVDGGFTV  243 (251)
Q Consensus       236 ~vdgG~~~  243 (251)
                      .+|||+.+
T Consensus       238 ~vdgG~~~  245 (247)
T 1uzm_A          238 PVDGGMGM  245 (247)
T ss_dssp             EESTTTTC
T ss_pred             EECCCccc
Confidence            99999865

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5.2e-44  Score=290.32  Aligned_cols=221  Identities=22%  Similarity=0.275  Sum_probs=192.6

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccC--CCHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDA--SSRAEREKLMKQV   69 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~i   69 (251)
                      ...+++|++|||||++|||                   +.+.++++.+++.+.+ .++.++.+|+  ++.++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            4568999999999999999                   4566666666666543 3778899999  9999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|
T Consensus        87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (252)
T 3f1l_A           87 AVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY  165 (252)
T ss_dssp             HHHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence            9999 899999999998654668889999999999999999999999999999999888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|+++. |+||+|+||+++|++......          ..+..++.+|+|+|+.++||+++.+++
T Consensus       166 ~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~dva~~~~~L~s~~~~~  234 (252)
T 3f1l_A          166 AASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFP----------TEDPQKLKTPADIMPLYLWLMGDDSRR  234 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCT----------TCCGGGSBCTGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCC----------ccchhccCCHHHHHHHHHHHcCccccC
Confidence            999999999999999999887 999999999999987533211          123345678999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      +|||.|.+|||....
T Consensus       235 itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          235 KTGMTFDAQPGRKPG  249 (252)
T ss_dssp             CCSCEEESSCC----
T ss_pred             CCCCEEEeCCCcCCC
Confidence            999999999998654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=9e-44  Score=290.09  Aligned_cols=221  Identities=19%  Similarity=0.324  Sum_probs=180.7

Q ss_pred             CcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------eEEEeccCCCHHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-------------------VTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ..++++++|++|||||++|||     .++++.+.+.|.+                   +.++.+|++|+++++++++++.
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVG-----LHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -------CCCEEESSTTSHHH-----HHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHH
Confidence            346778999999999999999     5555555544432                   4567899999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|+||||||... ... .+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|+
T Consensus        95 ~~~-g~iD~lv~nAg~~~-~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  171 (260)
T 3gem_A           95 TQT-SSLRAVVHNASEWL-AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC  171 (260)
T ss_dssp             HHC-SCCSEEEECCCCCC-CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHH
T ss_pred             Hhc-CCCCEEEECCCccC-CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHH
Confidence            999 89999999999875 333 567889999999999999999999999999998889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|+++ +|+||+|+||+++|++..    .+..........|.+++.+|+|+|+.+++|+  .++++
T Consensus       172 asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~i  244 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYV  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH--HCSSC
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCC
Confidence            9999999999999999998 699999999999999754    2334455566789999999999999999999  57899


Q ss_pred             cccEEEeCCCccccc
Q 041276          231 TGQTICVDGGFTVNG  245 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~  245 (251)
                      |||.|.||||+++.+
T Consensus       245 tG~~i~vdGG~~~~~  259 (260)
T 3gem_A          245 TGTTLTVNGGRHVKG  259 (260)
T ss_dssp             CSCEEEESTTTTTC-
T ss_pred             CCCEEEECCCcccCC
Confidence            999999999998864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4.2e-44  Score=291.14  Aligned_cols=226  Identities=28%  Similarity=0.372  Sum_probs=204.6

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +++|++|||||++|||                    +.+.+++..+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            6899999999999999                    34556666777777777888999999999999999999988761


Q ss_pred             -----CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           75 -----GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        75 -----~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                           +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .++||++||.++..+.+....|
T Consensus        85 ~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y  161 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAY  161 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHH
T ss_pred             ccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchh
Confidence                 24999999999876 667888999999999999999999999999999944  3899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||.|+||+++|++.+.....+..........|.+++.+|+|+|+.++||+++.+++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  241 (255)
T 3icc_A          162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW  241 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999999999999999999888777777777778889999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +|||.|.+|||+++
T Consensus       242 ~tG~~i~vdgG~~l  255 (255)
T 3icc_A          242 VTGQLIDVSGGSCL  255 (255)
T ss_dssp             CCSCEEEESSSTTC
T ss_pred             ccCCEEEecCCeeC
Confidence            99999999999865

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=6.7e-44  Score=293.97  Aligned_cols=238  Identities=18%  Similarity=0.236  Sum_probs=203.4

Q ss_pred             CCCCcccCCCCCEEEEecCC--CCcCcH-----------------HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276            7 HDRQDRWSLQGMTALVTGGT--KGLGNE-----------------AELNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas--~giG~~-----------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      .+...|..+++|+||||||+  +|||..                 ....+..+++.+...++.++.+|+++.++++++++
T Consensus        16 ~~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           16 PRGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             ------CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence            34456778999999999998  789910                 01223444444444457888999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCC---CCCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYT---TKPTVE-YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      ++.+.+ +++|+||||||....   ..++.+ .+.++|++.+++|+.+++.++++++|+|+++ .|+||++||.++..+.
T Consensus        96 ~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~  173 (280)
T 3nrc_A           96 ELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAM  173 (280)
T ss_dssp             HHHHHC-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCC
T ss_pred             HHHHHc-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCC
Confidence            999999 899999999998752   144445 8999999999999999999999999999876 5999999999999999


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....++.........|.+++.+|+|+|+.+++|+
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~  253 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLC  253 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTT
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998877655667777777889999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccccc
Q 041276          224 MPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      ++.++++||+.|.+|||+++..+
T Consensus       254 s~~~~~~tG~~i~vdgG~~~~~~  276 (280)
T 3nrc_A          254 SDMATGITGEVVHVDAGYHCVSM  276 (280)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCCC
T ss_pred             CcccCCcCCcEEEECCCccccCC
Confidence            99999999999999999988754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.9e-43  Score=292.37  Aligned_cols=231  Identities=23%  Similarity=0.313  Sum_probs=193.2

Q ss_pred             CCCCcccCCCCCEEEEecCCCCcC-------------------cH-HHHHHHHHHHH-hcCCeeEEEeccCCC----HHH
Q 041276            7 HDRQDRWSLQGMTALVTGGTKGLG-------------------NE-AELNECLREWK-TKCFKVTGSVCDASS----RAE   61 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas~giG-------------------~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~   61 (251)
                      .......++++|++|||||++|||                   +. +.++++.+++. +.+.++.++.+|+++    +++
T Consensus        13 ~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           13 GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             ---------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHH
T ss_pred             ccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHH
Confidence            344456778999999999999999                   33 56666666665 446678999999999    999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCC-----CC-----CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC----
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNYTTKPT-----VE-----YMAEDLSFLMSTNFESAYHLSQLAHPLLKASG----  127 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~----  127 (251)
                      ++++++++.+.+ +++|+||||||... ..++     .+     .+.++|++.+++|+.+++.+++.++|+|++++    
T Consensus        93 v~~~~~~~~~~~-g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  170 (288)
T 2x9g_A           93 CEEIINSCFRAF-GRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCT  170 (288)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHhc-CCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCC
Confidence            999999999999 89999999999875 4445     56     78899999999999999999999999998876    


Q ss_pred             --CceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC
Q 041276          128 --AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP  205 (251)
Q Consensus       128 --~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~  205 (251)
                        .|+||++||.++..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++ . .  .++....+....|
T Consensus       171 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~~~~~~~~~~p  246 (288)
T 2x9g_A          171 SSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEEEKDKWRRKVP  246 (288)
T ss_dssp             CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHHHHHHHHHTCT
T ss_pred             CCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChHHHHHHHhhCC
Confidence              68999999999999999999999999999999999999999999999999999999999 4 2  2333455556678


Q ss_pred             CCCC-CCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          206 MERP-GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       206 ~~~~-~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .+++ .+|+|+|+.+++|+++.++++||+.|.+|||+++
T Consensus       247 ~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          247 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            8888 9999999999999999999999999999999865

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-44  Score=296.83  Aligned_cols=231  Identities=26%  Similarity=0.421  Sum_probs=200.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF---KVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      .++++++|++|||||++|||                   +.+.++++.+++.+.+.   ++.++.+|++|++++++++++
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            46678999999999999999                   45566666677766555   788999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCC--CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-CC
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKP--TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-NL  145 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~  145 (251)
                      +.+.+ +++|+||||||... ..+  +.+.+.++|++.+++|+.+++.++++++|+|++++ |+||++||.++..+. ++
T Consensus       100 ~~~~~-g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~  176 (297)
T 1xhl_A          100 TLAKF-GKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG  176 (297)
T ss_dssp             HHHHH-SCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT
T ss_pred             HHHhc-CCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC
Confidence            99999 89999999999875 455  77899999999999999999999999999999877 999999999999888 88


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------HHHHHHHhhCCCCCCCCCHHHHHHH
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------EKFLEEVKCRTPMERPGEPKEVSSL  218 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~  218 (251)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.......       ++....+....|.+++.+|+|+|+.
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  256 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANI  256 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999999986543211       1223334455788899999999999


Q ss_pred             HHHHcCCC-CCCccccEEEeCCCcccc
Q 041276          219 VAFLCMPA-ASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~~-~~~~~G~~i~vdgG~~~~  244 (251)
                      +++|+++. +.+++|+.|.+|||+++.
T Consensus       257 v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          257 IVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHhCCcccCCccCcEEEECCCcccc
Confidence            99999987 889999999999998764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.2e-43  Score=289.49  Aligned_cols=228  Identities=27%  Similarity=0.352  Sum_probs=194.1

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++++|++|||||++|||                   +.+.++++.+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999                   445555566666543  33788899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ + +|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|++
T Consensus        83 ~~-g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           83 LG-G-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TT-C-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hc-C-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHH
Confidence            98 7 999999999865 56778899999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---------CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      ||++++.++++++.|++++||+||+|+||+++|++....         ...+.....+....|.+++.+|+|+|+.+++|
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l  239 (260)
T 2z1n_A          160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFL  239 (260)
T ss_dssp             HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987621         11111123344567888999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 041276          223 CMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++.++++|||.|.+|||+++
T Consensus       240 ~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          240 ASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTTTC
T ss_pred             hCccccCCCCCEEEeCCCccC
Confidence            999899999999999999764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-44  Score=291.26  Aligned_cols=233  Identities=26%  Similarity=0.369  Sum_probs=190.6

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++.+|++|||||++|||                    +...++.+.+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45679999999999999                    2233334444444445578889999999999999999999999


Q ss_pred             CCCccEEEEcccCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccc-cc-ccCCCCChhhH
Q 041276           74 NGKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSV-CG-VLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~-~~-~~~~~~~~~Y~  150 (251)
                       +++|+||||||.. ....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||. .+ ..+.+....|+
T Consensus        84 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  162 (264)
T 3i4f_A           84 -GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA  162 (264)
T ss_dssp             -SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred             -CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence             8999999999942 22567788999999999999999999999999999999888999999988 44 45667788999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|++++||+||+|+||++.|++.+...  ++.........|.+++.+|+|+|+.+++|+++.+.++
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~i  240 (264)
T 3i4f_A          163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMI  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC--------CCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCC
Confidence            99999999999999999999999999999999999987642  3444445566789999999999999999999999999


Q ss_pred             cccEEEeCCCccccccccc
Q 041276          231 TGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~~~~  249 (251)
                      |||.|.+|||+++.-++.+
T Consensus       241 tG~~i~vdGG~~~~~~~~~  259 (264)
T 3i4f_A          241 TGTIIEVTGAVDVIHREGH  259 (264)
T ss_dssp             CSCEEEESCSCCCCC----
T ss_pred             CCcEEEEcCceeeccCCcc
Confidence            9999999999998877654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-44  Score=289.74  Aligned_cols=225  Identities=28%  Similarity=0.426  Sum_probs=195.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee------------------EEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV------------------TGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~------------------~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .++++|++|||||++|||     .++++.+.+.|.++                  .++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIG-----RAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL-   75 (256)
T ss_dssp             CTTTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            457899999999999999     66666666555433                  567899999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||+
T Consensus        76 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           76 GRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            89999999999876 66778899999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +++.|+++++.|++++||+||+|+||+++|++....    ...++....+....|.+++.+|+|+|+.+++|+++.+.++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~  234 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI  234 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999999999999999999999975432    1112222334456788899999999999999999988999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      +|+.+.+|||..+.
T Consensus       235 ~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          235 TGAILPVDGGMTAS  248 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-44  Score=294.55  Aligned_cols=240  Identities=19%  Similarity=0.219  Sum_probs=198.3

Q ss_pred             CCCCcccCCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 041276            7 HDRQDRWSLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      ++.....++++|+||||||+  +|||                  +.....+..+++.+....+.++.+|++|++++++++
T Consensus         4 ~~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            4 HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             -----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence            34556778999999999999  9999                  111222333333333345778899999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCC---CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTT---KPTVE-YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS  142 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~  142 (251)
                      +++.+++ +++|+||||||+....   .++.+ .+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+
T Consensus        84 ~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~  160 (271)
T 3ek2_A           84 ASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERA  160 (271)
T ss_dssp             HHHHHHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB
T ss_pred             HHHHHHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccC
Confidence            9999999 8999999999987531   44555 899999999999999999999999999975  489999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      .+....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l  240 (271)
T 3ek2_A          161 IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFL  240 (271)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999877654456667777788999999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccccccccc
Q 041276          223 CMPAASYITGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~~~~~~  249 (251)
                      +++.+.++|||.|.+|||+++..-...
T Consensus       241 ~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          241 LSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             cCcccCCeeeeEEEECCCeeeehhhhh
Confidence            999999999999999999998765543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-44  Score=298.16  Aligned_cols=233  Identities=22%  Similarity=0.325  Sum_probs=200.2

Q ss_pred             ccCCCCCEEEEecCCCCcC----------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG----------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +.++++|++|||||++|||                      +.+.++++.+++...  +.++.++.+|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            3467899999999999999                      334455556666554  5688999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++.+++ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+...
T Consensus       108 ~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          108 NLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             TSCGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            999999 8999999999987656678899999999999999999999999999999998889999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-CCHH-HHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-SDEK-FLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++..... ..++ ....+....|    .+|+|+|+.+++|+++
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----~~pedvA~~v~~l~s~  262 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP----LMADDVADLIVYATSR  262 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC----EEHHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC----CCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999853221 2222 2233333333    3899999999999999


Q ss_pred             CCCCccccEEEeCCCccccccccc
Q 041276          226 AASYITGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~~~~~~  249 (251)
                      .+.+++||.+.+|||...-...+|
T Consensus       263 ~~~~i~g~~i~v~~g~~~p~~~~r  286 (287)
T 3rku_A          263 KQNTVIADTLIFPTNQASPHHIFR  286 (287)
T ss_dssp             CTTEEEEEEEEEETTEEETTEECC
T ss_pred             CCCeEecceEEeeCCCCCCccccc
Confidence            999999999999999987665554

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-43  Score=295.37  Aligned_cols=227  Identities=27%  Similarity=0.326  Sum_probs=196.3

Q ss_pred             cccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHH-hcCCeeEEEeccCCCHH---------
Q 041276           11 DRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWK-TKCFKVTGSVCDASSRA---------   60 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~---------   60 (251)
                      .|..+++|++|||||++|||                    +.+.++++.+++. ..+.++.++.+|+++++         
T Consensus        40 ~m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           40 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence            34458999999999999999                    2344555555554 34567888999999999         


Q ss_pred             --------HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCC--------------HHHHHHHHHhhhHHHHHHHHH
Q 041276           61 --------EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM--------------AEDLSFLMSTNFESAYHLSQL  118 (251)
Q Consensus        61 --------~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~  118 (251)
                              +++++++++.+.+ +++|+||||||... ..++.+.+              .++|++.+++|+.+++.+++.
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  197 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  197 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhc-CCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence                    9999999999999 89999999999876 56667777              899999999999999999999


Q ss_pred             HHHHHHhCC------CceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC
Q 041276          119 AHPLLKASG------AGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS  192 (251)
Q Consensus       119 ~~~~m~~~~------~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~  192 (251)
                      ++|+|++++      .|+||++||.++..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++ ...  
T Consensus       198 ~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--  274 (328)
T 2qhx_A          198 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--  274 (328)
T ss_dssp             HHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC--
T ss_pred             HHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc--
Confidence            999999876      79999999999999999999999999999999999999999999999999999999999 432  


Q ss_pred             CHHHHHHHhhCCCCC-CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          193 DEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                       ++....+....|.+ ++.+|+|+|+.+++|+++.+.++||+.|.+|||+.+
T Consensus       275 -~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          275 -PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             -HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence             45556666778888 999999999999999999899999999999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.9e-44  Score=292.61  Aligned_cols=222  Identities=22%  Similarity=0.332  Sum_probs=183.5

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC------------------CeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC------------------FKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~------------------~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++++|++|||||++|||     .++++.+.+.|                  .++.++.+|++|+++++++++.+.+ +
T Consensus         4 ~m~l~~k~vlVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~   77 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLG-----LATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAET-M   77 (257)
T ss_dssp             ------CEEEEETTTSHHH-----HHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             cceecCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence            4678999999999999999     55555555443                  3466788999999999999999877 7


Q ss_pred             CCCccEEEEcccCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--------CCCceEEEecccccccC
Q 041276           74 NGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA--------SGAGNIILVSSVCGVLS  142 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--------~~~g~iv~vss~~~~~~  142 (251)
                       +++|+||||||.....   .+..+.+.++|++.+++|+.+++.++++++|+|++        ++.|+||++||.++..+
T Consensus        78 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tl3_A           78 -GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG  156 (257)
T ss_dssp             -SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred             -CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence             8999999999986411   12235889999999999999999999999999998        56789999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHHHHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAF  221 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  221 (251)
                      .++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+..  .++.........|. +++.+|+|+|+.+++
T Consensus       157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  234 (257)
T 3tl3_A          157 QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVH  234 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHHHH
Confidence            888999999999999999999999999999999999999999998764  34556666677888 899999999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+++  .++|||.|.||||+++.
T Consensus       235 l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          235 IIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHC--TTCCSCEEEESTTC---
T ss_pred             HhcC--CCCCCCEEEECCCccCC
Confidence            9975  79999999999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.9e-44  Score=291.16  Aligned_cols=229  Identities=24%  Similarity=0.336  Sum_probs=166.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..+++++|+||||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35678999999999999999                   56677778888877788899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCC--CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           72 LFNGKLNILINNVGTNY--TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+ +++|+||||||...  ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++.   +....|
T Consensus        83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y  158 (253)
T 3qiv_A           83 EF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYY  158 (253)
T ss_dssp             HH-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             Hc-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchh
Confidence            99 89999999999842  2445678899999999999999999999999999999888999999999886   455679


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||.|+||+++|++.+.... ++....+....|.+++.+|+|+|+.+++|+++.+.+
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  237 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASW  237 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999998876533 344555666788899999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      +|||.|.+|||..++
T Consensus       238 ~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          238 ITGQIFNVDGGQIIR  252 (253)
T ss_dssp             CCSCEEEC-------
T ss_pred             CCCCEEEECCCeecC
Confidence            999999999999875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-43  Score=286.63  Aligned_cols=220  Identities=26%  Similarity=0.468  Sum_probs=196.8

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe---------------eEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK---------------VTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~---------------~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .++.+++|+||||||++|||     .++++.+.+.|.+               +.++.+|++|+++++++++++.+++ +
T Consensus        22 ~m~~~~~k~vlVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   95 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIG-----AGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERF-G   95 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHH-----HHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred             hhhCcCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHC-C
Confidence            45678999999999999999     8888888877654               4456899999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC--CCCChhhHHhH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS--TNLGTIYAATK  153 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~--~~~~~~Y~~sK  153 (251)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+  ..+...|++||
T Consensus        96 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK  174 (260)
T 3un1_A           96 RIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTK  174 (260)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHH
Confidence            9999999999886 67788999999999999999999999999999999998899999999888754  34568999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +|++.|+++++.|++++||+||+|+||+++|++...     +.........|.+++.+|+|+|+++++|  +.+.++|||
T Consensus       175 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~  247 (260)
T 3un1_A          175 GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGE  247 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSC
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCCCc
Confidence            999999999999999999999999999999998743     3445566778999999999999999999  567899999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .|.||||+++.
T Consensus       248 ~i~vdGG~~~~  258 (260)
T 3un1_A          248 ILHVDGGQNAG  258 (260)
T ss_dssp             EEEESTTGGGC
T ss_pred             EEEECCCeecc
Confidence            99999999875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=5.2e-44  Score=294.17  Aligned_cols=231  Identities=29%  Similarity=0.456  Sum_probs=202.5

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +|.++++|++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            45478999999999999999                   44556666677766667788999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH--HHhCCCceEEEecccccccCCCCChhh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL--LKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.  |++++.|+||++||.++..+.+....|
T Consensus        96 ~~-g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 2rhc_B           96 RY-GPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY  173 (277)
T ss_dssp             HT-CSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHH
T ss_pred             Hh-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccH
Confidence            99 89999999999876 667788999999999999999999999999999  988777999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---C------HHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---D------EKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      ++||++++.|+++++.|++++||+||+|+||+++|++......   .      ++....+....|.+++.+|+|+|+.++
T Consensus       174 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~  253 (277)
T 2rhc_B          174 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA  253 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999998643210   0      222334445578899999999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCccc
Q 041276          221 FLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +|+++.+.+++|+.+.+|||++.
T Consensus       254 ~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          254 YLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCchhcCCCCcEEEECCCccc
Confidence            99999889999999999999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=292.68  Aligned_cols=229  Identities=25%  Similarity=0.400  Sum_probs=199.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF---KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .++++|++|||||++|||                   +.+.++++.+++...+.   ++.++.+|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999                   45566666677766555   78899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCC----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-CC
Q 041276           71 SLFNGKLNILINNVGTNYTTKP----TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-NL  145 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~  145 (251)
                      +++ +++|+||||||... ..+    +.+.+.++|++.+++|+.+++.+++.++|+|++++ |+||++||.++..+. +.
T Consensus        82 ~~~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (280)
T 1xkq_A           82 KQF-GKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD  158 (280)
T ss_dssp             HHH-SCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS
T ss_pred             Hhc-CCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc
Confidence            999 89999999999875 444    67889999999999999999999999999998776 999999999999887 88


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------HHHHHHHhhCCCCCCCCCHHHHHHH
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------EKFLEEVKCRTPMERPGEPKEVSSL  218 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~  218 (251)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++.......       ++....+....|.+++.+|+|+|+.
T Consensus       159 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~  238 (280)
T 1xkq_A          159 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANI  238 (280)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999986543211       1223334445788899999999999


Q ss_pred             HHHHcCCC-CCCccccEEEeCCCcccc
Q 041276          219 VAFLCMPA-ASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~~-~~~~~G~~i~vdgG~~~~  244 (251)
                      +++|+++. +.+++|+.|.+|||+.+.
T Consensus       239 v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          239 ILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHhcCcccccCccCCeEEECCCcccc
Confidence            99999987 889999999999998765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.7e-43  Score=289.50  Aligned_cols=234  Identities=21%  Similarity=0.279  Sum_probs=202.9

Q ss_pred             cCCCCCEEEEecCC--CCcC-------------------cHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGT--KGLG-------------------NEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas--~giG-------------------~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +++++|++|||||+  +|||                   +....+.+.+...+.+. ++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            46889999999999  6799                   11111222222222232 68889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           71 SLFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      +++ +++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+...
T Consensus        83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           83 EQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred             HHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence            999 899999999998752   356778999999999999999999999999999975  48999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~  239 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMS  239 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCch
Confidence            99999999999999999999999999999999999999988776556667777788899999999999999999999999


Q ss_pred             CCccccEEEeCCCccccccccc
Q 041276          228 SYITGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~~~~~~  249 (251)
                      .++|||.|.+|||++....+..
T Consensus       240 ~~~tG~~i~vdGG~~~~~~~~~  261 (266)
T 3oig_A          240 RGITGENLHVDSGFHITARLEH  261 (266)
T ss_dssp             TTCCSCEEEESTTGGGCCCCC-
T ss_pred             hcCcCCEEEECCCeEEeeecCC
Confidence            9999999999999999877654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3e-43  Score=290.56  Aligned_cols=229  Identities=25%  Similarity=0.415  Sum_probs=197.9

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------c-HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------N-EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ..+++++|++|||||++|||                   + ...++++.+++...+.++.++.+|+++.++++++++++.
T Consensus        23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            35568899999999999999                   1 233455556666667788899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC-Chhh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL-GTIY  149 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-~~~Y  149 (251)
                      +.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.|+||++||..+..+.+. ...|
T Consensus       103 ~~~-g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y  178 (283)
T 1g0o_A          103 KIF-GKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVY  178 (283)
T ss_dssp             HHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHc-CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcch
Confidence            999 89999999999876 66778899999999999999999999999999993  4589999999999887764 8899


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----C-----CHHHHHHHhh--CCCCCCCCCHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----S-----DEKFLEEVKC--RTPMERPGEPKEVSSL  218 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~-----~~~~~~~~~~--~~~~~~~~~~~dva~~  218 (251)
                      ++||++++.|+++++.|++++||+||+|+||+++|++.....    .     .++....+..  ..|.+++.+|+|+|+.
T Consensus       179 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  258 (283)
T 1g0o_A          179 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV  258 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999754321    0     2344445555  7899999999999999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++|+++.+.++||+.|.+|||+++
T Consensus       259 v~~l~s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          259 VCFLASNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCccccCcCCCEEEeCCCccC
Confidence            9999999999999999999999753

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-43  Score=293.43  Aligned_cols=227  Identities=24%  Similarity=0.319  Sum_probs=193.0

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------c------------HHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------N------------EAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      .|.++++|+||||||++|||                   +            .+.+++....+...+.++.++.+|++|+
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            46789999999999999999                   2            5556666666666677888999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           60 AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        60 ~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++++++++++.+.+ +++|+||||||+.. ..  .+.+.++|++.+++|+.+++.++++++|+|.  +.|+||++||.++
T Consensus        84 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~-~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~  157 (287)
T 3pxx_A           84 AAVSRELANAVAEF-GKLDVVVANAGICP-LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCC-CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHc-CCCCEEEECCCcCc-cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchh
Confidence            99999999999999 89999999999875 33  3478899999999999999999999999993  4489999999988


Q ss_pred             ccCC-----------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-----------CC-HHH
Q 041276          140 VLST-----------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-----------SD-EKF  196 (251)
Q Consensus       140 ~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-----------~~-~~~  196 (251)
                      ..+.           +....|++||+|++.|+++++.|++++||+||+|+||+++|++.+...           .. .+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            8765           567789999999999999999999999999999999999999976410           01 111


Q ss_pred             HHH--HhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          197 LEE--VKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       197 ~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ...  .....| +++.+|+|+|++++||+++.++++|||.|.||||++++
T Consensus       238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            111  223455 78899999999999999999999999999999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.4e-43  Score=287.91  Aligned_cols=225  Identities=30%  Similarity=0.466  Sum_probs=189.6

Q ss_pred             CcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------EEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           10 QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------TGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ....++.+|++|||||++|||     .++++.+.+.|.++             .++.+|++|+++++++++++.+.+ ++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~   87 (253)
T 2nm0_A           14 LVPRSHMSRSVLVTGGNRGIG-----LAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETH-GP   87 (253)
T ss_dssp             ------CCCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHT-CS
T ss_pred             CCccCCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            445678899999999999999     88888888777554             356789999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||.++..+.+....|++||+++
T Consensus        88 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  166 (253)
T 2nm0_A           88 VEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGL  166 (253)
T ss_dssp             CSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence            999999999875 6667788899999999999999999999999999988789999999999988888888999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                      +.|+++++.|++++||+||.|+||+++|++.....  ++....+....|.+++.+|+|+|+.+++|+++.+.+++|+.|.
T Consensus       167 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~  244 (253)
T 2nm0_A          167 VGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT--DEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIP  244 (253)
T ss_dssp             HHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence            99999999999999999999999999999876432  2223444556788899999999999999999989999999999


Q ss_pred             eCCCccc
Q 041276          237 VDGGFTV  243 (251)
Q Consensus       237 vdgG~~~  243 (251)
                      +|||+++
T Consensus       245 vdGG~~~  251 (253)
T 2nm0_A          245 VDGGLGM  251 (253)
T ss_dssp             ESTTTTC
T ss_pred             ECCcccc
Confidence            9999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2e-43  Score=287.37  Aligned_cols=226  Identities=30%  Similarity=0.438  Sum_probs=193.0

Q ss_pred             CCCCEEEEecCCCCcCcH------------------HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           15 LQGMTALVTGGTKGLGNE------------------AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        15 l~~k~vlItGas~giG~~------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +++|++|||||++|||..                  .. ++..+++...+.++.++.+|++|+++++++++++.+.+ ++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            678999999999999910                  00 22333444444567788999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++||+++
T Consensus        80 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (255)
T 2q2v_A           80 VDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV  158 (255)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence            999999999875 5677889999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHH---H----HHH-hhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKF---L----EEV-KCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      +.|+++++.|++++||+||+|+||++.|++...... .+..   .    ..+ ....|.+++.+|+|+|+.+++|+++.+
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  238 (255)
T 2q2v_A          159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG  238 (255)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            999999999999999999999999999998643210 0111   1    223 456788899999999999999999988


Q ss_pred             CCccccEEEeCCCccc
Q 041276          228 SYITGQTICVDGGFTV  243 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~  243 (251)
                      ++++|+.+.+|||+++
T Consensus       239 ~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          239 SQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCCCCEEEECCCccC
Confidence            9999999999999865

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=7.9e-43  Score=281.24  Aligned_cols=219  Identities=30%  Similarity=0.516  Sum_probs=194.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe----------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFK----------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~----------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      +|++|||||++|||     .++++.+.+.|.+                +.++.+|+++ ++++++++++.+.+ +++|+|
T Consensus         2 ~k~vlVTGas~giG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~-g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIG-----RAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKRALEAL-GGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHHHHHHH-TSCCEE
T ss_pred             CCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHHHHHHc-CCCCEE
Confidence            68999999999999     6777777666544                3456789999 99999999999999 899999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--CCChhhHHhHHHHHH
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--NLGTIYAATKGAMNQ  158 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--~~~~~Y~~sK~a~~~  158 (251)
                      |||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.  +....|++||++++.
T Consensus        75 v~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~  153 (239)
T 2ekp_A           75 VHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLG  153 (239)
T ss_dssp             EECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHH
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHH
Confidence            99999876 667788999999999999999999999999999998888999999999998887  788999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      |+++++.|++++||+||+|+||++.|++.......++....+....|.+++.+|+|+|+.+++|+++.+++++|+.+.+|
T Consensus       154 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vd  233 (239)
T 2ekp_A          154 LTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVD  233 (239)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEEC
Confidence            99999999999999999999999999986543223444555666788899999999999999999998999999999999


Q ss_pred             CCccc
Q 041276          239 GGFTV  243 (251)
Q Consensus       239 gG~~~  243 (251)
                      ||+++
T Consensus       234 gG~~~  238 (239)
T 2ekp_A          234 GGFLA  238 (239)
T ss_dssp             TTTTT
T ss_pred             CCccc
Confidence            99865

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.2e-43  Score=291.60  Aligned_cols=223  Identities=19%  Similarity=0.235  Sum_probs=196.5

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHH-------HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEA-------ELNECLREWKTKCFKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   65 (251)
                      .+++++|++|||||++|||                   +.+       .+++..+++...+.++.++.+|++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4678999999999999999                   111       35566666666677889999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-C
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-N  144 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~  144 (251)
                      ++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+. +
T Consensus        84 ~~~~~~~~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           84 VAKTVEQF-GGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHH-SCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            99999999 89999999999986 678889999999999999999999999999999999888999999999998886 7


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecC-cccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW-FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ....|++||+|++.|+++++.|++++||+||+|+|| .+.|++.+         .......|.+++.+|+|+|+.+++|+
T Consensus       162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~---------~~~~~~~~~~r~~~pedvA~~~~~l~  232 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ---------NLLGGDEAMARSRKPEVYADAAYVVL  232 (285)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHH---------HHHTSCCCCTTCBCTHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHH---------hhccccccccCCCCHHHHHHHHHHHh
Confidence            789999999999999999999999999999999999 68887642         22334457889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccccc
Q 041276          224 MPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      ++.+ ++|||.|.+|||+...+.
T Consensus       233 s~~~-~~tG~~i~~dgg~~~~g~  254 (285)
T 3sc4_A          233 NKPS-SYTGNTLLCEDVLLESGV  254 (285)
T ss_dssp             TSCT-TCCSCEEEHHHHHHHHTC
T ss_pred             CCcc-cccceEEEEcCchhccCc
Confidence            9888 999999999999876554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.3e-43  Score=288.27  Aligned_cols=222  Identities=30%  Similarity=0.415  Sum_probs=190.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++++|++|||||++|||     .++++.+.+.                     +.++.++.+|++++++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLG-----AEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999     3333333322                     235677889999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++|
T Consensus        77 ~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  154 (254)
T 1hdc_A           77 F-GSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGAS  154 (254)
T ss_dssp             H-SCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHH
Confidence            9 89999999999876 567788999999999999999999999999999998878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCC-CHHHHHHHHHHHcCCCCCCcc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG-EPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~~~~~~~~~  231 (251)
                      |++++.|+++++.|++++||+||+|+||+++|++.+....  +....+....|.+++. +|+|+|+.+++|+++.+++++
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~t  232 (254)
T 1hdc_A          155 KWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch--hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCC
Confidence            9999999999999999999999999999999997543211  0111122345778888 999999999999999899999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      |+.+.+|||+.+.
T Consensus       233 G~~~~vdgG~~~~  245 (254)
T 1hdc_A          233 GAELAVDGGWTTG  245 (254)
T ss_dssp             SCEEEESTTTTTS
T ss_pred             CCEEEECCCcccc
Confidence            9999999998764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.7e-43  Score=285.63  Aligned_cols=227  Identities=29%  Similarity=0.423  Sum_probs=200.4

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      .++++|++|||||++|||     .++++.+.+.|.+             +.++.+|++|+++++++++++.+.+ +++|+
T Consensus         4 ~~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD~   77 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIG-----RAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEY-GSISV   77 (264)
T ss_dssp             GGGTTCEEEEESCSSHHH-----HHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             cccCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            357899999999999999     8888888877644             4457899999999999999999999 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++||++++.|
T Consensus        78 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  156 (264)
T 2dtx_A           78 LVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGL  156 (264)
T ss_dssp             EEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHH
Confidence            999999876 6677889999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCC-----CCH----HHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYL-----SDE----KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +++++.|++++ |+||+|+||+++|++.....     ..+    +....+....|.+++.+|+|+|+.+++|+++.+.++
T Consensus       157 ~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  235 (264)
T 2dtx_A          157 TKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFI  235 (264)
T ss_dssp             HHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999988 99999999999999864321     022    333344455788899999999999999999989999


Q ss_pred             cccEEEeCCCccccccc
Q 041276          231 TGQTICVDGGFTVNGFF  247 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~~  247 (251)
                      +|+.|.+|||+.+..+.
T Consensus       236 tG~~i~vdGG~~~~~p~  252 (264)
T 2dtx_A          236 TGTCLYVDGGLSIRAPI  252 (264)
T ss_dssp             CSCEEEESTTGGGCCCC
T ss_pred             CCcEEEECCCcccCCCC
Confidence            99999999999887654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-43  Score=287.24  Aligned_cols=221  Identities=29%  Similarity=0.420  Sum_probs=189.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------CeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC---------------------FKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++|++|||||++|||     .++++.+.+.|                     .++.++.+|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlITGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIG-----RAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE   76 (263)
T ss_dssp             CTTTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            357899999999999999     33333333222                     3567889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+| ++ .|+||++||.++. +.+....|++
T Consensus        77 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~a  151 (263)
T 2a4k_A           77 EF-GRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAA  151 (263)
T ss_dssp             HH-SCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHH
T ss_pred             Hc-CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHH
Confidence            99 89999999999876 6677889999999999999999999999999999 54 6999999999998 7777889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||++++.|+++++.|++++||+||+|+||+++|++....  .+.....+....|.+++.+|+|+|+.+++|+++.+++++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~t  229 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYIT  229 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCc
Confidence            999999999999999999999999999999999997654  344455566678889999999999999999999899999


Q ss_pred             ccEEEeCCCccccc
Q 041276          232 GQTICVDGGFTVNG  245 (251)
Q Consensus       232 G~~i~vdgG~~~~~  245 (251)
                      |+.+.+|||+.+..
T Consensus       230 G~~i~vdgG~~~~~  243 (263)
T 2a4k_A          230 GQALYVDGGRSIVG  243 (263)
T ss_dssp             SCEEEESTTTTTC-
T ss_pred             CCEEEECCCccccC
Confidence            99999999988754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-43  Score=285.76  Aligned_cols=225  Identities=32%  Similarity=0.373  Sum_probs=193.4

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            57899999999999999                   233333333333   3467788999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ |+||++||.++..+.+....|++||+
T Consensus        79 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (253)
T 1hxh_A           79 GTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             CSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHH
Confidence            89999999999875 66778899999999999999999999999999999887 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccC--CeEEEEEecCcccCCCCCCCCCCHHHHHH-Hhh---CCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          155 AMNQLAKNLACEWARD--NIRINSVAPWFITTPLTEPYLSDEKFLEE-VKC---RTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       155 a~~~~~~~la~e~~~~--~i~v~~i~pG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +++.|+++++.|++++  ||+||+|+||++.|++....... ..... +..   ..|.+++.+|+|+|+.+++|+++.++
T Consensus       157 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~  235 (253)
T 1hxh_A          157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK-GVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESS  235 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT-TCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch-hhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCcccc
Confidence            9999999999999988  99999999999999986432111 11122 333   56788899999999999999999899


Q ss_pred             CccccEEEeCCCccccc
Q 041276          229 YITGQTICVDGGFTVNG  245 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~~  245 (251)
                      +++|+.+.+|||++..+
T Consensus       236 ~~tG~~~~vdgG~~~~~  252 (253)
T 1hxh_A          236 VMSGSELHADNSILGMG  252 (253)
T ss_dssp             TCCSCEEEESSSCTTTT
T ss_pred             CCCCcEEEECCCccccC
Confidence            99999999999987654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.4e-43  Score=289.82  Aligned_cols=218  Identities=17%  Similarity=0.249  Sum_probs=187.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHH-------HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEA-------ELNECLREWKTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      +++++|++|||||++|||                   +.+       .+++..+.+...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            578999999999999999                   111       244555556566678889999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC--CC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS--TN  144 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~--~~  144 (251)
                      +++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+  .+
T Consensus        82 ~~~~~~~-g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTF-GGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHc-CCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999 89999999999876 67788899999999999999999999999999999988899999999999887  67


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecC-cccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPW-FITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ....|++||+|++.|+++++.|++++||+||+|+|| .++|++.+...           ..+..++.+|+|+|+.+++|+
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pedvA~~v~~l~  228 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPEIMADAAHAVL  228 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHHHHHHHHHHHh
Confidence            788999999999999999999999999999999999 69999874321           123445679999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 041276          224 MPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++.++++|||.| +|||.+..
T Consensus       229 s~~~~~itG~~i-~~~g~~~~  248 (274)
T 3e03_A          229 TREAAGFHGQFL-IDDEVLAQ  248 (274)
T ss_dssp             TSCCTTCCSCEE-EHHHHHHH
T ss_pred             CccccccCCeEE-EcCcchhh
Confidence            999999999999 88776543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.1e-43  Score=286.18  Aligned_cols=226  Identities=31%  Similarity=0.434  Sum_probs=195.6

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------------eeEEEeccCCCHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------------KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..+++++|++|||||++|||     .++++.+.+.|.                     ++.++.+|++|+++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A            6 GIFDLSGRKAIVTGGSKGIG-----AAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             CTTCCTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEeCCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHH
Confidence            35568899999999999999     444444433322                     4567889999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~  148 (251)
                      .+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.+....
T Consensus        81 ~~~~-g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  158 (263)
T 3ak4_A           81 IDAL-GGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAH  158 (263)
T ss_dssp             HHHH-TCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHc-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchh
Confidence            9999 89999999999875 66778899999999999999999999999999999877 799999999999999889999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----C-----HHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----D-----EKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      |++||++++.|+++++.|++++||+||.|+||+++|++......    .     ++....+....|.+++.+|+|+|+.+
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  238 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV  238 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999998543210    0     23334455667889999999999999


Q ss_pred             HHHcCCCCCCccccEEEeCCCccc
Q 041276          220 AFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++|+++.+++++|+.+.+|||+++
T Consensus       239 ~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          239 VFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHhCccccCCCCCEEEECcCEeC
Confidence            999998889999999999999865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.2e-42  Score=284.30  Aligned_cols=241  Identities=68%  Similarity=1.096  Sum_probs=181.3

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ....+++++|+||||||++|||                   +.+.++++.+++...+.++.++.+|+++.++++++++++
T Consensus         6 ~~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence            3445678999999999999999                   445566666666666667889999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.+....|
T Consensus        86 ~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  164 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  164 (266)
T ss_dssp             HHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             HHHhCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchH
Confidence            9987458999999999875 567778899999999999999999999999999998878999999999999888889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||++++.++++++.|++++||+++.|+||++.|++.+... .+..........|.+++.+|+|+|+.+++|+++.+.+
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  243 (266)
T 1xq1_A          165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999999876543 2223333444567788899999999999999988899


Q ss_pred             ccccEEEeCCCccccccccccC
Q 041276          230 ITGQTICVDGGFTVNGFFFRRT  251 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~~~~~~  251 (251)
                      ++|+.+.+|||+.+..+.+.+|
T Consensus       244 ~~G~~~~v~gG~~~~~~~~~~~  265 (266)
T 1xq1_A          244 ITGQTICVDGGLTVNGFSYQPQ  265 (266)
T ss_dssp             CCSCEEECCCCEEETTEEECCC
T ss_pred             ccCcEEEEcCCccccccCCCCC
Confidence            9999999999999887766654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=8.8e-44  Score=287.67  Aligned_cols=219  Identities=23%  Similarity=0.327  Sum_probs=192.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHh-cCC--------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKT-KCF--------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~-~~~--------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      .++|++|||||++|||     .++++.+.+ .+.              .+.++.+|++|+++++++++.+.  + +++|+
T Consensus         2 ~~~k~vlITGas~gIG-----~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~-~~id~   73 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIG-----KAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIK--N-VSFDG   73 (244)
T ss_dssp             -CCEEEEEETTTSHHH-----HHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTT--T-CCEEE
T ss_pred             CCCCeEEEeCCCChHH-----HHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHH--h-CCCCE
Confidence            3679999999999999     788888876 332              34567899999999999996554  5 79999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++  |+||++||..+..+.+....|++||+|++.|
T Consensus        74 lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~  150 (244)
T 4e4y_A           74 IFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQM  150 (244)
T ss_dssp             EEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHHH
T ss_pred             EEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHHH
Confidence            999999876 6778899999999999999999999999999999765  8999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---------HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +++++.|++++||+||+|+||+++|++.+.....         ++.........|.+++.+|+|+|+.+++|+++.+.++
T Consensus       151 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~i  230 (244)
T 4e4y_A          151 TKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFM  230 (244)
T ss_dssp             HHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccc
Confidence            9999999999999999999999999986543211         2245556677899999999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      |||.|.+|||+++.
T Consensus       231 tG~~i~vdGG~~~~  244 (244)
T 4e4y_A          231 TGGLIPIDGGYTAQ  244 (244)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCCeEeECCCccCC
Confidence            99999999999863

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=286.42  Aligned_cols=230  Identities=26%  Similarity=0.410  Sum_probs=186.4

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHH---HhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREW---KTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+++|++|||||++|||                   +.++++++.+++   ...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            47889999999999999                   445556666666   22345688899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCC----CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc-ccCCCCC
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEY----MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG-VLSTNLG  146 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~-~~~~~~~  146 (251)
                      .+ +++|+||||||... ..++.+.    +.++|++.+++|+.+++.+++.++|+|++++ |+||++||.++ ..+.+..
T Consensus        83 ~~-g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KF-GKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HH-SCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             Hc-CCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            99 89999999999875 4556666    9999999999999999999999999998876 99999999998 8888889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHH------HHHHhhCCCCCCCCCHHHHHHHH
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKF------LEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      ..|++||++++.|+++++.|++++||+||+|+||++.|++...... .+..      ...+....|.+++.+|+|+|+.+
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  239 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI  239 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999998754311 1111      33444557888999999999999


Q ss_pred             HHHcCCCCCC-ccccEEEeCCCcccccc
Q 041276          220 AFLCMPAASY-ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       220 ~~l~~~~~~~-~~G~~i~vdgG~~~~~~  246 (251)
                      ++|+++.+.+ ++|+.+.+|||..+.--
T Consensus       240 ~~l~s~~~~~~~tG~~~~vdgG~~~~~~  267 (278)
T 1spx_A          240 AFLADRKTSSYIIGHQLVVDGGSSLIMG  267 (278)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC--
T ss_pred             HHHcCccccCcccCcEEEECCCcccccC
Confidence            9999987776 99999999999876543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.2e-42  Score=283.72  Aligned_cols=224  Identities=28%  Similarity=0.382  Sum_probs=188.8

Q ss_pred             CCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .+|+||||||++|||                    +.+.++++.+.+.+.+.++.++.+|++|.++++++++++.+.+ +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-G  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence            579999999999999                    4455666677777777789999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC---CCceEEEecccccccCCC-CChhhHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS---GAGNIILVSSVCGVLSTN-LGTIYAA  151 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---~~g~iv~vss~~~~~~~~-~~~~Y~~  151 (251)
                      ++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|.|++.   +.|+||++||.++..+.+ .+..|++
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            999999999987645778899999999999999999999999999999873   468999999999988776 6788999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|++.|+++++.|++++||+|++|+||+++|++..... .++.........|.+++.+|+|+|+.+++|+++.+.++|
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~t  262 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVT  262 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcccccc
Confidence            9999999999999999999999999999999999876532 233444555678889999999999999999999999999


Q ss_pred             ccEEEeCCCc
Q 041276          232 GQTICVDGGF  241 (251)
Q Consensus       232 G~~i~vdgG~  241 (251)
                      |+.|.+|||.
T Consensus       263 G~~i~vdgG~  272 (272)
T 4e3z_A          263 GSILNVSGGR  272 (272)
T ss_dssp             SCEEEESTTC
T ss_pred             CCEEeecCCC
Confidence            9999999995

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-43  Score=286.00  Aligned_cols=224  Identities=30%  Similarity=0.483  Sum_probs=191.4

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .++++|++|||||++|||     .++++.+.+.|.                    .+.++.+|++|+++++++++++.++
T Consensus         5 ~~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIG-----AGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CTTTTCEEEEETCSSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999     334433333322                    3567889999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|+++ .|+||++||..+..+.+....|++|
T Consensus        80 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  157 (270)
T 1yde_A           80 F-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT  157 (270)
T ss_dssp             H-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHH
Confidence            9 8999999999987545677889999999999999999999999999999876 4899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---CCCH-HHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---LSDE-KFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++++.|+++++.|++++||+||+|+||++.|++.+..   .... ..........|.+++.+|+|+|+.+++|+++ ++
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~  236 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-AN  236 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CT
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CC
Confidence            99999999999999999999999999999999975432   1111 1222233567899999999999999999997 78


Q ss_pred             CccccEEEeCCCcccc
Q 041276          229 YITGQTICVDGGFTVN  244 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~  244 (251)
                      ++|||.|.||||+++.
T Consensus       237 ~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          237 FCTGIELLVTGGAELG  252 (270)
T ss_dssp             TCCSCEEEESTTTTSC
T ss_pred             CcCCCEEEECCCeecc
Confidence            9999999999998764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3.8e-42  Score=282.90  Aligned_cols=224  Identities=23%  Similarity=0.321  Sum_probs=189.2

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCH----HHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDASSR----AEREKLMK   67 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~   67 (251)
                      ..+++|++|||||++|||                    +.+.++++.+++... +.++.++.+|++|+    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            346899999999999999                    234455566666554 56788999999999    99999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCH-----------HHHHHHHHhhhHHHHHHHHHHHHHHHhCCC------ce
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMA-----------EDLSFLMSTNFESAYHLSQLAHPLLKASGA------GN  130 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~------g~  130 (251)
                      ++.+.+ +++|+||||||... ..++.+.+.           ++|++.+++|+.+++.++++++|+|+ ++.      |+
T Consensus        87 ~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~  163 (276)
T 1mxh_A           87 CSFRAF-GRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLS  163 (276)
T ss_dssp             HHHHHH-SCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEE
T ss_pred             HHHHhc-CCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcE
Confidence            999999 89999999999876 566777777           99999999999999999999999998 555      89


Q ss_pred             EEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCC-C
Q 041276          131 IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMER-P  209 (251)
Q Consensus       131 iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~  209 (251)
                      ||++||.++..+.++...|++||++++.|+++++.|++++||+||+|+||++.|+  ...  .++....+....|.++ +
T Consensus       164 iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~--~~~~~~~~~~~~p~~r~~  239 (276)
T 1mxh_A          164 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM--PQETQEEYRRKVPLGQSE  239 (276)
T ss_dssp             EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS--CHHHHHHHHTTCTTTSCC
T ss_pred             EEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC--CHHHHHHHHhcCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999  222  3444555556688888 8


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .+|+|+|+.+++|+++.+.+++|+.|.+|||+++
T Consensus       240 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            9999999999999999899999999999999865

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.2e-42  Score=285.63  Aligned_cols=231  Identities=22%  Similarity=0.303  Sum_probs=194.6

Q ss_pred             CCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+++|++|||||+  +|||                  +...+++..+++.+....+.++.+|++|+++++++++++.+.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999  9999                  1111222333343322236778999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|+++ .|+||++||.++..+.+....|+
T Consensus        98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence             899999999998752   2567789999999999999999999999999999865 49999999999999998899999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+.++
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~  255 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAI  255 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCC
Confidence            99999999999999999999999999999999999976543334444555556788899999999999999999889999


Q ss_pred             cccEEEeCCCcccccc
Q 041276          231 TGQTICVDGGFTVNGF  246 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~  246 (251)
                      +|+.+.+|||+.+...
T Consensus       256 tG~~~~vdgg~~~~~~  271 (285)
T 2p91_A          256 TGEVVHVDNGYHIMGV  271 (285)
T ss_dssp             CSCEEEESTTGGGBSC
T ss_pred             CCCEEEECCCcccccc
Confidence            9999999999887543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=7.2e-43  Score=285.01  Aligned_cols=233  Identities=23%  Similarity=0.300  Sum_probs=195.4

Q ss_pred             CCCCCEEEEecCC--CCcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++|||||+  +|||                  +...+++..+++.+....+.++.+|++|+++++++++++.+.+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999  9999                  1111222333333322236788999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+....|+
T Consensus        85 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  161 (261)
T 2wyu_A           85 -GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMA  161 (261)
T ss_dssp             -SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHH
Confidence             899999999998652   256778899999999999999999999999999974  38999999999999998999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||++++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+.++
T Consensus       162 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~  241 (261)
T 2wyu_A          162 IAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGI  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCC
Confidence            99999999999999999999999999999999999876543334445555566788999999999999999999989999


Q ss_pred             cccEEEeCCCccccccccc
Q 041276          231 TGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~~~~  249 (251)
                      +|+.+.+|||+++....++
T Consensus       242 tG~~~~vdgG~~~~~~~~~  260 (261)
T 2wyu_A          242 TGEVVYVDAGYHIMGMELE  260 (261)
T ss_dssp             CSCEEEESTTGGGBC----
T ss_pred             CCCEEEECCCccccCCCCC
Confidence            9999999999988766543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.5e-43  Score=295.93  Aligned_cols=221  Identities=20%  Similarity=0.214  Sum_probs=192.3

Q ss_pred             CCCEEEEecCCC--CcCcHHHHHHHHHHHHhcCCeeE------------------------------------EEeccCC
Q 041276           16 QGMTALVTGGTK--GLGNEAELNECLREWKTKCFKVT------------------------------------GSVCDAS   57 (251)
Q Consensus        16 ~~k~vlItGas~--giG~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~D~~   57 (251)
                      .+|++|||||++  |||     .++++.+.+.|.++.                                    ++.+|++
T Consensus         1 ~~k~~lITGas~~~GIG-----~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   75 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYG-----WGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS   75 (329)
T ss_dssp             CCCEEEEECCSSSSSHH-----HHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTT
T ss_pred             CCcEEEEECCCCCCchH-----HHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccc
Confidence            379999999986  999     667777666655444                                    4567777


Q ss_pred             CH--H------------------HHHHHHHHHHHhcCCCccEEEEcccCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHH
Q 041276           58 SR--A------------------EREKLMKQVSSLFNGKLNILINNVGTN-YTTKPTVEYMAEDLSFLMSTNFESAYHLS  116 (251)
Q Consensus        58 ~~--~------------------~~~~~~~~i~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  116 (251)
                      +.  +                  +++++++++.+++ +++|+||||||+. ....++.+.+.++|++.+++|+.+++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  154 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            66  6                  9999999999999 8999999999975 23667889999999999999999999999


Q ss_pred             HHHHHHHHhCCCceEEEecccccccCCCCCh-hhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCCCCC-
Q 041276          117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGT-IYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPYLSD-  193 (251)
Q Consensus       117 ~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~~~~-  193 (251)
                      ++++|+|+++  |+||++||.++..+.+... .|++||+|+.+|+++|+.|+++ +||+||+|+||+++|+|.+..... 
T Consensus       155 ~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~  232 (329)
T 3lt0_A          155 KYFVNIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN  232 (329)
T ss_dssp             HHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---
T ss_pred             HHHHHHHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhc
Confidence            9999999876  8999999999999999886 9999999999999999999998 899999999999999987664321 


Q ss_pred             ------------------------------------------HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          194 ------------------------------------------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       194 ------------------------------------------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                                                                ++..+......|.+++.+|+|+|+.++||+++.++++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~it  312 (329)
T 3lt0_A          233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAIT  312 (329)
T ss_dssp             ---------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             ccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhcccc
Confidence                                                      01245556678999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||.|.+|||+++.
T Consensus       313 G~~i~vdGG~~~~  325 (329)
T 3lt0_A          313 GQTIYVDNGLNIM  325 (329)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEEcCCeeEE
Confidence            9999999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=6.8e-43  Score=293.40  Aligned_cols=226  Identities=21%  Similarity=0.290  Sum_probs=196.4

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------c----------HHHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------N----------EAELNECLREWKTKCFKVTGSVCDASSRAE   61 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   61 (251)
                      .+..+++|+||||||++|||                   +          .+.++++.+++...+.++.++.+|++|+++
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            35678999999999999999                   2          455667777777777788899999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC------CceEEEec
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG------AGNIILVS  135 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~------~g~iv~vs  135 (251)
                      ++++++++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++.+      .|+||++|
T Consensus       101 v~~~~~~~~~~~-g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A          101 AAGLIQTAVETF-GGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHHHHH-SCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            999999999999 89999999999986 66788999999999999999999999999999998542      37999999


Q ss_pred             ccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHH
Q 041276          136 SVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEV  215 (251)
Q Consensus       136 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  215 (251)
                      |.++..+.++...|++||+|++.|+++++.|++++||+||+|+|| +.|++.........  .   ...+..+..+|+|+
T Consensus       179 S~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~--~---~~~~~~~~~~pedv  252 (322)
T 3qlj_A          179 SGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM--A---TQDQDFDAMAPENV  252 (322)
T ss_dssp             CHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGGGT
T ss_pred             CHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh--h---ccccccCCCCHHHH
Confidence            999999999999999999999999999999999999999999999 99999876544321  1   11122345689999


Q ss_pred             HHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          216 SSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       216 a~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+.++||+++.+.++||+.|.+|||..+.
T Consensus       253 a~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          253 SPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             HHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            99999999999999999999999999774

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.4e-42  Score=277.02  Aligned_cols=217  Identities=24%  Similarity=0.316  Sum_probs=190.9

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe----ccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV----CDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~----~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      |+++++|++|||||++|||     .++++.+.+.|.++....    +|++|+++++++++++     +++|+||||||..
T Consensus         1 M~~~~~k~vlVTGas~gIG-----~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~-----g~id~lv~nAg~~   70 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIG-----AELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETI-----GAFDHLIVTAGSY   70 (223)
T ss_dssp             ----CCEEEEEETTTSHHH-----HHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHH-----CSEEEEEECCCCC
T ss_pred             CCCCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHh-----CCCCEEEECCCCC
Confidence            3567899999999999999     899999998887776654    8999999999998764     7999999999988


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHH
Q 041276           88 YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW  167 (251)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  167 (251)
                      .+..++.+.+.++|++.+++|+.+++.++++++|+|++.  |+||++||.++..+.++...|++||+|++.|+++++.|+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  148 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--GSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKEL  148 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--eEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            547788899999999999999999999999999999763  899999999999999999999999999999999999999


Q ss_pred             ccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          168 ARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       168 ~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++  |+||+|+||+++|++.+.....  +...+......|.+++.+|+|+|+++++|++  +.++|||.|.+|||..+.
T Consensus       149 ~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          149 AP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             TT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTGGGC
T ss_pred             cC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCcEEEecCCeecC
Confidence            87  9999999999999998765432  2234555667899999999999999999997  578999999999998763

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-42  Score=279.84  Aligned_cols=225  Identities=31%  Similarity=0.475  Sum_probs=177.6

Q ss_pred             CCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +..+..++++|+||||||++|||                   +.+.++++.+++.   .++.++.+|+++.+++++++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHT
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHh
Confidence            34556788999999999999999                   3333333333332   3567788999999999888765


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      +     +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...
T Consensus        82 ~-----~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  155 (249)
T 3f9i_A           82 T-----SNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQAN  155 (249)
T ss_dssp             C-----SCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHH
T ss_pred             c-----CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCch
Confidence            3     68999999999876 56667888899999999999999999999999999888899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||+|++.|+++++.|++++||+||.|+||++.|++.+..  .+.....+....|.+++.+|+|+|+.+++|+++.+.
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  233 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNAS  233 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccC
Confidence            999999999999999999999999999999999999998765  345566666778999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      ++|||.|.+|||+.+
T Consensus       234 ~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          234 YITGQTLHVNGGMLM  248 (249)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CccCcEEEECCCEee
Confidence            999999999999875

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.4e-42  Score=284.01  Aligned_cols=227  Identities=19%  Similarity=0.241  Sum_probs=194.6

Q ss_pred             CCCCCEEEEecCC--CCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGT--KGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++++|++|||||+  +|||                   +.+ .++..+++.+....+.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  9999                   111 22233334332224678899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           73 FNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      + +++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+....|
T Consensus        82 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           82 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             c-CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            9 899999999998752   256778999999999999999999999999999975  3899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+.+
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~  238 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  238 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999997654333444455555678899999999999999999998999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      ++|+.+.+|||+.+.
T Consensus       239 ~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          239 VSGEVHFVDAGYHVM  253 (275)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCCEEEECCCcccC
Confidence            999999999998874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.6e-42  Score=279.49  Aligned_cols=226  Identities=19%  Similarity=0.265  Sum_probs=184.6

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +.+|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+.+ +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4689999999999999                   5667778888888878889999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|++||+|
T Consensus        81 ~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           81 RIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            9999999999876 678889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      +++|+++++.|+ + ||+||+|+||+++|++......... .....  .....+.+|+|+|+.+++|+++...+.+|+.+
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~  234 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEET-MAAMD--TYRAIALQPADIARAVRQVIEAPQSVDTTEIT  234 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhH-HHHHH--hhhccCCCHHHHHHHHHHHhcCCccCccceEE
Confidence            999999999998 4 9999999999999999866433211 11100  11123468999999999999999999999999


Q ss_pred             EeCCCccccccc
Q 041276          236 CVDGGFTVNGFF  247 (251)
Q Consensus       236 ~vdgG~~~~~~~  247 (251)
                      ..++|..+....
T Consensus       235 i~p~~~~~~~~~  246 (264)
T 3tfo_A          235 IRPTASGNAENL  246 (264)
T ss_dssp             EEECC-------
T ss_pred             EecCccccccCc
Confidence            999998876543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-41  Score=279.47  Aligned_cols=229  Identities=26%  Similarity=0.438  Sum_probs=201.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..+.+++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence            35668899999999999999                   44556666777766667888999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||.++..+.+....|++
T Consensus       118 ~~-~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  195 (285)
T 2c07_A          118 EH-KNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  195 (285)
T ss_dssp             HC-SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hc-CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHH
Confidence            99 89999999999876 66778899999999999999999999999999999887799999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||++++.++++++.|+++.||+++.|+||++.|++....  .+.....+....|.+++.+|+|+|+.+++|+++.+.+++
T Consensus       196 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~  273 (285)
T 2c07_A          196 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYIN  273 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCC
Confidence            999999999999999999999999999999999987653  344455556677888999999999999999998889999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |+.+.+|||+.+
T Consensus       274 G~~i~v~gG~~~  285 (285)
T 2c07_A          274 GRVFVIDGGLSP  285 (285)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CCEEEeCCCccC
Confidence            999999999863

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.4e-42  Score=280.57  Aligned_cols=218  Identities=22%  Similarity=0.288  Sum_probs=188.7

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-e--c---------------cCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-V--C---------------DASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-~--~---------------D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +|++|||||++|||     .++++.+.+.|.++... .  -               |+.|.++++++++++.+.+ +++|
T Consensus         1 ~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAG-----PAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHG-EAID   74 (244)
T ss_dssp             -CEEEESSTTSTTH-----HHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGS-SCEE
T ss_pred             CCEEEEECCCChHH-----HHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHc-CCCC
Confidence            58999999999999     88899998888776554 2  1               2235566777888888888 8999


Q ss_pred             EEEEcccCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           79 ILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        79 ~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +||||||... .   .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||+|
T Consensus        75 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  153 (244)
T 1zmo_A           75 TIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAA  153 (244)
T ss_dssp             EEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHH
T ss_pred             EEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHH
Confidence            9999999876 5   67889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCC---CCCCCCHHHHHHHhh-CCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLT---EPYLSDEKFLEEVKC-RTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ++.|+++++.|++++||+||+|+||+++|++.   +..... +....+.. ..|.+++.+|+|+|+.+++|+++.+.++|
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~t  232 (244)
T 1zmo_A          154 TVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIV  232 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGT
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            99999999999999999999999999999987   432111 22233333 57888999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 041276          232 GQTICVDGGFT  242 (251)
Q Consensus       232 G~~i~vdgG~~  242 (251)
                      ||.|.+|||++
T Consensus       233 G~~i~vdgG~~  243 (244)
T 1zmo_A          233 GQFFAFTGGYL  243 (244)
T ss_dssp             TCEEEESTTCC
T ss_pred             CCEEEeCCCCC
Confidence            99999999964

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.4e-41  Score=277.25  Aligned_cols=231  Identities=32%  Similarity=0.463  Sum_probs=202.6

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|+||||||++|||                    +.+.++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999                    2344555666666656678899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+....|++|
T Consensus        84 -g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (261)
T 1gee_A           84 -GKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             -SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHH
Confidence             89999999999875 56677889999999999999999999999999999876 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++++.++++++.|++++||+++.|+||++.|++.......++....+....|.+++.+|+|+|+.+++|+++.+.+++|
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  241 (261)
T 1gee_A          162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999999999999999999999987543223344455555678888999999999999999988889999


Q ss_pred             cEEEeCCCcccccc
Q 041276          233 QTICVDGGFTVNGF  246 (251)
Q Consensus       233 ~~i~vdgG~~~~~~  246 (251)
                      +.+.+|||..+...
T Consensus       242 ~~~~v~gg~~~~~~  255 (261)
T 1gee_A          242 ITLFADGGMTLYPS  255 (261)
T ss_dssp             CEEEESTTGGGCGG
T ss_pred             cEEEEcCCcccCCC
Confidence            99999999987643

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1e-41  Score=278.03  Aligned_cols=219  Identities=31%  Similarity=0.451  Sum_probs=190.1

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.++++++.+++..   ++.++.+|++|+++++++++++.+++ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-   79 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF-   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-
Confidence            47899999999999999                   22223333333221   36678999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++||+
T Consensus        80 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (260)
T 1nff_A           80 GGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  158 (260)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            89999999999876 56778899999999999999999999999999999887899999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.++++++.|++++||+||+|+||++.|++.. . ..+.    +. ..|.+++.+|+|+|+.+++|+++.+.+++|+.
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~  231 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPED----IF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAE  231 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chhh----HH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCE
Confidence            9999999999999999999999999999999865 2 1111    11 45778889999999999999998889999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      +.+|||.++.
T Consensus       232 ~~v~gG~~~~  241 (260)
T 1nff_A          232 FVVDGGTVAG  241 (260)
T ss_dssp             EEESTTGGGS
T ss_pred             EEECCCeecc
Confidence            9999998764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.6e-42  Score=282.34  Aligned_cols=229  Identities=18%  Similarity=0.286  Sum_probs=193.2

Q ss_pred             CCCCCEEEEecCC--CCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGT--KGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas--~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++|++|||||+  +|||                   +. .+++..+++.+......++.+|++|+++++++++++.++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            3789999999999  9999                   11 122233333332223467889999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           73 FNGKLNILINNVGTNYT---TKPTVE-YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      + +++|+||||||....   ..++.+ .+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+....
T Consensus        85 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  161 (265)
T 1qsg_A           85 W-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNV  161 (265)
T ss_dssp             C-SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTH
T ss_pred             c-CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchH
Confidence            9 899999999998652   145667 899999999999999999999999999975  389999999999999989999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||++++.|+++++.|++++||+||+|+||+++|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+.
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~  241 (265)
T 1qsg_A          162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999999765433344445555567888999999999999999998899


Q ss_pred             CccccEEEeCCCcccccc
Q 041276          229 YITGQTICVDGGFTVNGF  246 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~~~  246 (251)
                      +++|+.+.+|||+++..+
T Consensus       242 ~~tG~~~~vdgG~~~~~~  259 (265)
T 1qsg_A          242 GISGEVVHVDGGFSIAAM  259 (265)
T ss_dssp             TCCSCEEEESTTGGGBCS
T ss_pred             CccCCEEEECCCcCCCCc
Confidence            999999999999987643

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-42  Score=277.34  Aligned_cols=220  Identities=24%  Similarity=0.395  Sum_probs=188.6

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||++|||     .++++.+.+.|.                   ++.++.+|++|+++++++    .+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~   72 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIG-----QAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF----ANEV   72 (246)
T ss_dssp             CTTTTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHH----HHHC
T ss_pred             CCCCCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHH----HHHh
Confidence            357899999999999999     666666655443                   356678999999998844    4456


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-CChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-LGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+ +...|++|
T Consensus        73 -~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~s  150 (246)
T 2ag5_A           73 -ERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTT  150 (246)
T ss_dssp             -SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHH
T ss_pred             -CCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHH
Confidence             79999999999876 5677889999999999999999999999999999988889999999999988877 88999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++++.++++++.|++++||+||+|+||++.|++.....    ..++....+....|.+++.+|+|+|+.+++|+++.+.
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~  230 (246)
T 2ag5_A          151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA  230 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999754311    1123344455677888999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      ++|||.|.+|||+++
T Consensus       231 ~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          231 YVTGNPVIIDGGWSL  245 (246)
T ss_dssp             TCCSCEEEECTTGGG
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999864

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=3.9e-41  Score=274.88  Aligned_cols=222  Identities=24%  Similarity=0.334  Sum_probs=188.8

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ...|..+++|+||||||++|||                   +.+.++++.+++...+.++.++.+|++++++++++++++
T Consensus        21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            3456778999999999999999                   566777778888777788999999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+.+ +++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|
T Consensus       101 ~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (262)
T 3rkr_A          101 LAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAY  179 (262)
T ss_dssp             HHHH-SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHH
T ss_pred             HHhc-CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchH
Confidence            9999 899999999998544677889999999999999999999999999999999888999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|++.|+++++.|++++||+|+.|+||+++|++......          ..+..+..+|+|+|+.+++|+++....
T Consensus       180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~dvA~~v~~l~s~~~~~  249 (262)
T 3rkr_A          180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPDDIADVVALLATQADQS  249 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHHHHHHHHHHHhcCcccc
Confidence            9999999999999999999999999999999999998765322          234556789999999999999999999


Q ss_pred             ccccEEEeCCCc
Q 041276          230 ITGQTICVDGGF  241 (251)
Q Consensus       230 ~~G~~i~vdgG~  241 (251)
                      ++||.+..+.|.
T Consensus       250 ~~g~~~i~p~~~  261 (262)
T 3rkr_A          250 FISEVLVRPTLK  261 (262)
T ss_dssp             CEEEEEEECCCC
T ss_pred             ccCcEEeccccC
Confidence            999999887663

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=4.7e-41  Score=273.86  Aligned_cols=231  Identities=28%  Similarity=0.462  Sum_probs=202.1

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3568899999999999999                   345555666666666667899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC--hhhH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYA  150 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~Y~  150 (251)
                      + +++|+||||||......++.+.+.++|++.+++|+.+++.+++.+.|+|++++.++||++||..+..+.+..  ..|+
T Consensus        88 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 E-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             H-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            9 899999999998653556778899999999999999999999999999998878999999999998887776  8999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||++++.++++++.|++++||+++.|+||++.|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+.++
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  246 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLM  246 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccC
Confidence            99999999999999999999999999999999999876211234455555667788899999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      +|+.+.+|||+.+
T Consensus       247 ~G~~~~v~gg~~~  259 (260)
T 3awd_A          247 TGAIVNVDAGFTV  259 (260)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCcEEEECCceec
Confidence            9999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=9.1e-42  Score=277.09  Aligned_cols=219  Identities=17%  Similarity=0.154  Sum_probs=177.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++++|++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            357899999999999999                   456667777778777788999999999999999999999887 


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus        82 -g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           82 -APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             -SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             -CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence             68999999999887 6788899999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEE-EEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          154 GAMNQLAKNLACEWARDNIRI-NSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v-~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      +|++.|+++++.|++++||+| |+|+||+++|++.+....  +.........|.+ +.+|+|+|+.+++|+++....++|
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~  236 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE--QMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTF  236 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCGGGBCS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch--hhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhccee
Confidence            999999999999999999999 999999999999876532  2233344455666 889999999999999988888899


Q ss_pred             cEEEe
Q 041276          233 QTICV  237 (251)
Q Consensus       233 ~~i~v  237 (251)
                      +...-
T Consensus       237 ~i~~~  241 (252)
T 3h7a_A          237 EMEIR  241 (252)
T ss_dssp             EEEEB
T ss_pred             eEEee
Confidence            87654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.3e-41  Score=272.56  Aligned_cols=225  Identities=27%  Similarity=0.429  Sum_probs=196.7

Q ss_pred             CCEEEEecCCCCcC-------------------cHHHHHHHHHHH-HhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           17 GMTALVTGGTKGLG-------------------NEAELNECLREW-KTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +|++|||||++|||                   +.+.++++.+++ ...+.++.++.+|++|+++++++++++.+.+ ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence            68999999999999                   344455555555 3334568889999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCC---CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           77 LNILINNVGTNYTTKP---TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        77 id~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      +|+||||||... ..+   +.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|++||
T Consensus        81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           81 IDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            999999999865 444   7788999999999999999999999999999988889999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.++++++.|+.++||+++.++||++.|++.......+.....+....|.+++.+|+|+|+.+++|+++.+.+++|+
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA  239 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCC
Confidence            99999999999999999999999999999999875422234445555567788899999999999999999988999999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+|||+++
T Consensus       240 ~~~v~gG~~~  249 (250)
T 2cfc_A          240 ALVMDGAYTA  249 (250)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCceec
Confidence            9999999763

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.2e-42  Score=279.44  Aligned_cols=216  Identities=19%  Similarity=0.229  Sum_probs=183.4

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--C-CeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--C-FKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ++++|++|||||++|||                   +.+.++++.+++.+.  + .++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            57899999999999999                   556666777776654  2 5788999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      ++ +++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++
T Consensus        84 ~~-g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  160 (250)
T 3nyw_A           84 KY-GAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS  160 (250)
T ss_dssp             HH-CCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred             hc-CCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence            99 89999999999876 5555 788999999999999999999999999999888899999999999997777899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC-CCCc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA-ASYI  230 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~  230 (251)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+...          ...|.+++.+|+|+|+.+++|+++. ..++
T Consensus       161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~p~dva~~v~~l~s~~~~~~~  230 (250)
T 3nyw_A          161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------TPFKDEEMIQPDDLLNTIRCLLNLSENVCI  230 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------CCSCGGGSBCHHHHHHHHHHHHTSCTTEEC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------CCcccccCCCHHHHHHHHHHHHcCCCceEe
Confidence            9999999999999999999999999999999998754332          2346667889999999999999965 4567


Q ss_pred             cccEEEeCCCcc
Q 041276          231 TGQTICVDGGFT  242 (251)
Q Consensus       231 ~G~~i~vdgG~~  242 (251)
                      ++..|.||||..
T Consensus       231 ~~~~i~vd~~~~  242 (250)
T 3nyw_A          231 KDIVFEMKKSII  242 (250)
T ss_dssp             CEEEEEEHHHHH
T ss_pred             eEEEEEeecccc
Confidence            888999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=287.40  Aligned_cols=220  Identities=19%  Similarity=0.244  Sum_probs=192.6

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHH-------HHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEA-------ELNECLREWKTKCFKVTGSVCDASSRAER   62 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   62 (251)
                      +..+.++++|+||||||++|||                   +.+       .+++..+++...+.++.++.+|++|++++
T Consensus        37 ~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           37 LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred             CccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Confidence            3456789999999999999999                   111       24556666666677889999999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC
Q 041276           63 EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS  142 (251)
Q Consensus        63 ~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~  142 (251)
                      +++++++.+++ +++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+
T Consensus       117 ~~~~~~~~~~~-g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~  194 (346)
T 3kvo_A          117 SAAVEKAIKKF-GGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP  194 (346)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC
Confidence            99999999999 89999999999886 67788999999999999999999999999999999988899999999999887


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCc-ccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          143 --TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWF-ITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       143 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                        .+....|++||+|++.|+++++.|++ +||+||+|+||+ ++|++.+          .+....+.+++.+|+|+|+.+
T Consensus       195 ~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~----------~~~~~~~~~r~~~pedvA~~v  263 (346)
T 3kvo_A          195 VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMD----------MLGGPGIESQCRKVDIIADAA  263 (346)
T ss_dssp             GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHH----------HHCC--CGGGCBCTHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHH----------hhccccccccCCCHHHHHHHH
Confidence              77889999999999999999999999 899999999995 8887543          223334677888999999999


Q ss_pred             HHHcCCCCCCccccEEEeCCCccc
Q 041276          220 AFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ++|+++ ++++|||.+ +|||+..
T Consensus       264 ~~L~s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          264 YSIFQK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             HHHHTS-CTTCCSCEE-EHHHHHH
T ss_pred             HHHHhc-CCCCCceEE-ECCcEeh
Confidence            999999 999999998 9999653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.8e-41  Score=277.62  Aligned_cols=224  Identities=22%  Similarity=0.340  Sum_probs=193.5

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++++|++|||||++|||                   +.+.++++.+++   +.++.++.+|+++.++++++++++ +
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            46678999999999999999                   334444444444   346788999999999999999999 7


Q ss_pred             hcCCCccEEEEc-ccCCCCCCCC-----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh------CCCceEEEeccccc
Q 041276           72 LFNGKLNILINN-VGTNYTTKPT-----VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA------SGAGNIILVSSVCG  139 (251)
Q Consensus        72 ~~~~~id~lv~~-ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~------~~~g~iv~vss~~~  139 (251)
                      ++ +++|++||| +|... ...+     .+.+.++|++.+++|+.+++.+++.++|.|++      ++.|+||++||.++
T Consensus       100 ~~-~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A          100 QL-GRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             TS-SEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             Hh-CCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence            77 899999999 55443 3333     36889999999999999999999999999987      56689999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHHHH
Q 041276          140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSL  218 (251)
Q Consensus       140 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  218 (251)
                      ..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+..  .++....+....|. +++.+|+|+|+.
T Consensus       178 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~~  255 (281)
T 3ppi_A          178 YEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADA  255 (281)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHHH
T ss_pred             cCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999988764  34556667777887 889999999999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCcccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++|+++  .++|||.|.+|||+.+.
T Consensus       256 v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          256 AAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHcC--CCcCCcEEEECCCcccC
Confidence            9999974  78999999999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.4e-41  Score=276.59  Aligned_cols=223  Identities=18%  Similarity=0.216  Sum_probs=194.2

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ..+.+|++|||||++|||     .++++.+.+.|.                  ++.++.+|++|.++++++++++.+.+ 
T Consensus        12 ~~~~~k~vlVTGas~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   85 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIG-----EAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIY-   85 (266)
T ss_dssp             ---CCCEEEEESTTSHHH-----HHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHC-
Confidence            357899999999999999     777777766553                  34567899999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||+
T Consensus        86 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~  164 (266)
T 3p19_A           86 GPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKF  164 (266)
T ss_dssp             CSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHH
Confidence            89999999999876 67788999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHh-hCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVK-CRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      |++.|+++++.|++++||+||+|+||+++|++....... .....+. ...|.+++.+|+|+|+++++|++.....+.++
T Consensus       165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~  243 (266)
T 3p19_A          165 AVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ-QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIRE  243 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH-HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccch-hhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCcccee
Confidence            999999999999999999999999999999998765432 2222222 23478899999999999999999998889998


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+....++..
T Consensus       244 i~i~p~~~~~  253 (266)
T 3p19_A          244 IALAPTKQQP  253 (266)
T ss_dssp             EEEEETTCCC
T ss_pred             eEEecCCCCC
Confidence            8887776653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=9e-42  Score=279.70  Aligned_cols=222  Identities=20%  Similarity=0.175  Sum_probs=187.3

Q ss_pred             CCCCCEEEEecC--CCCcCcHHHHHHHHHHHHhc----------------------CCeeEEEeccCCCHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGG--TKGLGNEAELNECLREWKTK----------------------CFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        14 ~l~~k~vlItGa--s~giG~~~~~~~~~~~~~~~----------------------~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+++|++|||||  ++|||     .++++.+.+.                      +.++.++.+|++|+++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG-----~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIA-----FHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHH-----HHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchH-----HHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHH
Confidence            478999999999  99999     3333322222                      335677889999999999999999


Q ss_pred             HHhcCC---CccEEEEcccCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC
Q 041276           70 SSLFNG---KLNILINNVGTNYT----TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS  142 (251)
Q Consensus        70 ~~~~~~---~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~  142 (251)
                      .+.+ +   ++|+||||||...+    ..++.+.+.++|++.+++|+.+++.++++++|+|+++  |+||++||..+ .+
T Consensus        79 ~~~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~  154 (269)
T 2h7i_A           79 TEAI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RA  154 (269)
T ss_dssp             HHHH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SC
T ss_pred             HHHh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cc
Confidence            9999 7   99999999998642    3567789999999999999999999999999999764  89999999876 67


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---CCHH-------HHHHHhhCCCCC-CCCC
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---SDEK-------FLEEVKCRTPME-RPGE  211 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~~~~-------~~~~~~~~~~~~-~~~~  211 (251)
                      .+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++.+...   ..++       ..+.+....|.+ ++.+
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~  234 (269)
T 2h7i_A          155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD  234 (269)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTC
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCC
Confidence            7788999999999999999999999999999999999999999764321   1121       123344567888 6999


Q ss_pred             HHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+|+|+.++||+++.++++|||.|.+|||+++.
T Consensus       235 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          235 ATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             CHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            999999999999999999999999999998764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=7.4e-42  Score=284.04  Aligned_cols=230  Identities=22%  Similarity=0.257  Sum_probs=192.6

Q ss_pred             cCCCCCEEEEecCC--CCcCcHHHHHHHHHHHHhcCCeeEEE------------------------------------ec
Q 041276           13 WSLQGMTALVTGGT--KGLGNEAELNECLREWKTKCFKVTGS------------------------------------VC   54 (251)
Q Consensus        13 ~~l~~k~vlItGas--~giG~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~   54 (251)
                      +++++|++|||||+  +|||     .++++.+.+.|.++...                                    .+
T Consensus         4 ~~l~~k~~lVTGas~~~GIG-----~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYG-----WAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPL   78 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHH-----HHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEE
T ss_pred             cccCCCEEEEECCCCCCChH-----HHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhcccccccccccccc
Confidence            45789999999999  9999     77777777666555432                                    22


Q ss_pred             --------cCCC------------HHHHHHHHHHHHHhcCCCccEEEEcccCCC-CCCCCCCCCHHHHHHHHHhhhHHHH
Q 041276           55 --------DASS------------RAEREKLMKQVSSLFNGKLNILINNVGTNY-TTKPTVEYMAEDLSFLMSTNFESAY  113 (251)
Q Consensus        55 --------D~~~------------~~~~~~~~~~i~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~  113 (251)
                              |+++            +++++++++++.+++ +++|+||||||+.. ...++.+.+.++|++.+++|+.+++
T Consensus        79 ~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~  157 (297)
T 1d7o_A           79 DAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             CTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence                    2322            568899999999999 89999999999753 2456778999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCceEEEecccccccCCCCC-hhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCCC
Q 041276          114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPYL  191 (251)
Q Consensus       114 ~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~~  191 (251)
                      .++++++|+|++.  |+||++||.++..+.+.. ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++.+...
T Consensus       158 ~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~  235 (297)
T 1d7o_A          158 SLLSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             HHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             HHHHHHHHHhccC--ceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc
Confidence            9999999999763  899999999999988887 69999999999999999999985 8999999999999999976532


Q ss_pred             CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccccccccc
Q 041276          192 SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFRR  250 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~~~~~  250 (251)
                      ..++.........|.+++.+|+|+|+.+++|+++.+.++||+.|.+|||+++.+..+.+
T Consensus       236 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~~~~~  294 (297)
T 1d7o_A          236 FIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDS  294 (297)
T ss_dssp             HHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTTC
T ss_pred             ccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeecCCCCC
Confidence            22334444445678899999999999999999998999999999999999887655443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=8.8e-41  Score=271.33  Aligned_cols=227  Identities=31%  Similarity=0.499  Sum_probs=195.6

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCee-EEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKV-TGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .++++++|++|||||++|||                   +.++++++.+++   +.++ .++.+|++|+++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            45678999999999999999                   233333333333   2245 788999999999999999998


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC--hh
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TI  148 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~  148 (251)
                      + + +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+..  ..
T Consensus        82 ~-~-~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  158 (254)
T 2wsb_A           82 A-V-APVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASS  158 (254)
T ss_dssp             H-H-SCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHH
T ss_pred             h-h-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchH
Confidence            8 8 89999999999876 566778899999999999999999999999999998888999999999998887777  89


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||++++.++++++.|++++||+++.|+||++.|++.+.....++....+....|.+++.+|+|+|+.+++|+++.+.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  238 (254)
T 2wsb_A          159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAAS  238 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999998654333345555566677888999999999999999998888


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      +++|+.+.+|||+.+
T Consensus       239 ~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          239 YVTGAILAVDGGYTV  253 (254)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             cccCCEEEECCCEec
Confidence            999999999999764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=9.8e-41  Score=269.51  Aligned_cols=223  Identities=28%  Similarity=0.450  Sum_probs=197.3

Q ss_pred             CCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           17 GMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        17 ~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      ||++|||||++|||                    +.+.++.+.+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            58999999999999                    3344555555665556678889999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.+++.+.|+|++++.++||++||..+..+.+....|++||+++
T Consensus        80 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           80 IDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             CSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            999999999876 5677788999999999999999999999999999988789999999999998988999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc-CCCCCCccccEE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPAASYITGQTI  235 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~i  235 (251)
                      +.++++++.|+.++||+++.|+||++.|++.+..  .+..........|.+++.+|+|+|+.+++|+ ++.+.+++|+.+
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~  236 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAF  236 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEE
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEE
Confidence            9999999999999999999999999999987653  2344455566778889999999999999999 777889999999


Q ss_pred             EeCCCccc
Q 041276          236 CVDGGFTV  243 (251)
Q Consensus       236 ~vdgG~~~  243 (251)
                      .+|||+.+
T Consensus       237 ~v~gG~~~  244 (244)
T 1edo_A          237 TIDGGIAI  244 (244)
T ss_dssp             EESTTTTC
T ss_pred             EeCCCccC
Confidence            99999763

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=9.9e-41  Score=270.09  Aligned_cols=217  Identities=25%  Similarity=0.304  Sum_probs=189.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccC--CCHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDA--SSRAEREKLMKQ   68 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~   68 (251)
                      +...+++|++|||||++|||                   +.+.++++.+++...+ .++.++.+|+  ++.+++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            44578999999999999999                   4566667777776654 4566666666  999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChh
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      +.+.+ +++|+||||||...+..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...
T Consensus        88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  166 (247)
T 3i1j_A           88 VEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGA  166 (247)
T ss_dssp             HHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcch
Confidence            99999 89999999999876567888999999999999999999999999999999988899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      |++||+|++.|+++++.|+.+ +||+||+|+||+++|+|.......          .+..+..+|+|+|+.++||+++++
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~l~s~~~  236 (247)
T 3i1j_A          167 YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------ENPLNNPAPEDIMPVYLYLMGPDS  236 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------SCGGGSCCGGGGTHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------cCccCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999999976 899999999999999875432211          122345689999999999999999


Q ss_pred             CCccccEEEeC
Q 041276          228 SYITGQTICVD  238 (251)
Q Consensus       228 ~~~~G~~i~vd  238 (251)
                      +++|||.|++.
T Consensus       237 ~~itG~~i~~~  247 (247)
T 3i1j_A          237 TGINGQALNAQ  247 (247)
T ss_dssp             TTCCSCEEECC
T ss_pred             ccccCeeecCC
Confidence            99999999863

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.5e-40  Score=269.58  Aligned_cols=227  Identities=27%  Similarity=0.440  Sum_probs=195.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||++|||                   +.+.+++..+++... .++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999                   233333444443322 467888999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.+....|++|
T Consensus        81 -~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (251)
T 1zk4_A           81 -GPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNAS  158 (251)
T ss_dssp             -SSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHH
Confidence             89999999999875 667788999999999999999999999999999998876 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          153 KGAMNQLAKNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       153 K~a~~~~~~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      |++++.++++++.|+.  ++||+++.|+||++.|++.+.. ..+..........|.+++.+|+|+|+.+++|+++.+.++
T Consensus       159 K~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  237 (251)
T 1zk4_A          159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccc
Confidence            9999999999999998  8899999999999999987654 222222223345678889999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      +|+.+.+|||+.+
T Consensus       238 ~G~~~~v~gG~~~  250 (251)
T 1zk4_A          238 TGSEFVVDGGYTA  250 (251)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECCCccC
Confidence            9999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4.2e-41  Score=272.14  Aligned_cols=226  Identities=31%  Similarity=0.519  Sum_probs=176.5

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++|||||++|||                    +...++++.+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46889999999999999                    2233444555555556678889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|++||
T Consensus        82 -~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           82 -GRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             -SCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence             89999999999875 5566778889999999999999999999999999988789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.++++++.|++++||++|.++||++.|++....  .+.....+....|.+++.+|+|+|+.+++|+++.+.+++|+
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  237 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQ  237 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCc
Confidence            9999999999999999999999999999999986543  23444555566788889999999999999999888899999


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+|||+.+
T Consensus       238 ~~~v~gG~~~  247 (247)
T 2hq1_A          238 VINIDGGLVM  247 (247)
T ss_dssp             EEEESTTC--
T ss_pred             EEEeCCCccC
Confidence            9999999764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.9e-40  Score=267.53  Aligned_cols=219  Identities=22%  Similarity=0.288  Sum_probs=189.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            47899999999999999                   4566667777777666788999999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ |+||++||.++..+.+....|++||+
T Consensus        83 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           83 GGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             SCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            89999999999875 67788899999999999999999999999999998877 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCC--CCHHHHHHHHHHHcCCCCCCccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP--GEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |++.|+++++.|++++||+||+|+||+++|++...... +....... ..| +++  .+|+|+|+.+++|+++.+.+.++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~-~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~  237 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYE-QRI-SQIRKLQAQDIAEAVRYAVTAPHHATVH  237 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHH-HHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHH-hcc-cccCCCCHHHHHHHHHHHhCCCccCccc
Confidence            99999999999999999999999999999998765422 22222221 223 455  89999999999999988888777


Q ss_pred             cEEEeCC
Q 041276          233 QTICVDG  239 (251)
Q Consensus       233 ~~i~vdg  239 (251)
                      + +.+++
T Consensus       238 ~-i~i~~  243 (247)
T 2jah_A          238 E-IFIRP  243 (247)
T ss_dssp             E-EEEEE
T ss_pred             e-EEecC
Confidence            6 45553

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=6.2e-41  Score=292.51  Aligned_cols=225  Identities=28%  Similarity=0.350  Sum_probs=189.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ...+++|++|||||++|||     .++++.+.+.|.                     .+.++.+|++|.++++++++++.
T Consensus       208 ~~~l~gk~~LVTGgsgGIG-----~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIG-----ATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHH-----HHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHH-----HHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHH
Confidence            3457899999999999999     333333333222                     23567899999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+++++|+||||||+.. ...+.+.+.++|++.+++|+.+++++++.+.|.|++++.++||++||.++..+.++...|+
T Consensus       283 ~~~g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Ya  361 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYA  361 (454)
T ss_dssp             HHSTTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHH
Confidence            999334999999999986 6788899999999999999999999999999999988889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||+++++|+++++.|++++||+||+|+||+++|+|.+......  .+......+.++..+|+|+|+.++||+++.+.++
T Consensus       362 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~i  439 (454)
T 3u0b_A          362 TTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT--REVGRRLNSLFQGGQPVDVAELIAYFASPASNAV  439 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh--HHHHHhhccccCCCCHHHHHHHHHHHhCCccCCC
Confidence            99999999999999999999999999999999999987643221  2223345678888999999999999999999999


Q ss_pred             cccEEEeCCCcccc
Q 041276          231 TGQTICVDGGFTVN  244 (251)
Q Consensus       231 ~G~~i~vdgG~~~~  244 (251)
                      |||+|.||||..+.
T Consensus       440 tG~~i~vdGG~~lG  453 (454)
T 3u0b_A          440 TGNTIRVCGQAMLG  453 (454)
T ss_dssp             CSCEEEESSSBSCC
T ss_pred             CCcEEEECCccccc
Confidence            99999999999875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=5.8e-41  Score=272.70  Aligned_cols=219  Identities=24%  Similarity=0.300  Sum_probs=188.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC------------------CHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS------------------SRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~------------------~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |++|||||++|||     .++++.+.+.|.++....-+..                  |+++++++++++.+.+ +++|+
T Consensus         2 k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGG-----MGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTH-----HHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             eEEEEeCCCchHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCE
Confidence            7899999999999     7777777776666554322211                  5667888999999999 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++||++++.|
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  155 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence            99999987336778889999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcc---------cCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          160 AKNLACEWARDNIRINSVAPWFI---------TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +++++.|++++||+||+|+||++         +|++...   .++....+....|.+++.+|+|+|+.+++|+++.+.++
T Consensus       156 ~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  232 (254)
T 1zmt_A          156 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYL  232 (254)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            99999999999999999999999         6665432   23344444556788899999999999999999999999


Q ss_pred             cccEEEeCCCccccc
Q 041276          231 TGQTICVDGGFTVNG  245 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~  245 (251)
                      ||+.|.+|||+++..
T Consensus       233 tG~~~~vdgG~~~~~  247 (254)
T 1zmt_A          233 TGQVFWLAGGFPMIE  247 (254)
T ss_dssp             TTCEEEESTTCCCCC
T ss_pred             cCCEEEECCCchhhc
Confidence            999999999987653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.5e-40  Score=273.68  Aligned_cols=228  Identities=27%  Similarity=0.451  Sum_probs=193.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++++|++|||||++|||                   +...++++.+.+...+.++.++.+|++|+++++++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            4568999999999999999                   112233333344434557888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCC-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC--CCCChhh
Q 041276           73 FNGKLNILINNVGTNYTTKPTV-EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS--TNLGTIY  149 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~--~~~~~~Y  149 (251)
                      + +++|+||||||......++. +.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+  .+....|
T Consensus       109 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 3ctm_A          109 F-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY  187 (279)
T ss_dssp             H-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHH
T ss_pred             h-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccH
Confidence            9 89999999999876325666 788999999999999999999999999999888899999999999888  7778899


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||++++.++++++.|++++| +||.|+||+++|++....  .++....+....|.+++.+|+|+|+.+++|+++.+.+
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  264 (279)
T 3ctm_A          188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTF  264 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999 999999999999998542  3444444455678889999999999999999998899


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      ++|+.|.+|||+++
T Consensus       265 ~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          265 TTGSDVVIDGGYTC  278 (279)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             ccCCEEEECCCeec
Confidence            99999999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=5.6e-40  Score=273.18  Aligned_cols=236  Identities=25%  Similarity=0.357  Sum_probs=200.5

Q ss_pred             CCCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHH
Q 041276            7 HDRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus         7 ~~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      .++....++++|++|||||++|||                   +.+.++++.+++.+. +.++.++.+|++|++++++++
T Consensus        16 ~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   95 (302)
T 1w6u_A           16 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV   95 (302)
T ss_dssp             SCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHH
Confidence            344456678999999999999999                   445555566666554 567889999999999999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hCCCceEEEecccccccCCCC
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~  145 (251)
                      +++.+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|+ +++.++||++||..+..+.+.
T Consensus        96 ~~~~~~~-g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  173 (302)
T 1w6u_A           96 SELIKVA-GHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF  173 (302)
T ss_dssp             HHHHHHT-CSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHHc-CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC
Confidence            9999999 89999999999865 56777889999999999999999999999999998 445689999999999999989


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC-CCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      ...|++||++++.++++++.+++++||+++.|+||++.|+ +.............+....|.+++.+|+|+|+.+++|++
T Consensus       174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~  253 (302)
T 1w6u_A          174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCS  253 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999998 544433332223445566788899999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 041276          225 PAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +.+.+++|+.+.+|||..+.
T Consensus       254 ~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          254 DYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             GGGTTCCSCEEEESTTHHHH
T ss_pred             CcccccCCCEEEECCCeeec
Confidence            88889999999999998764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.2e-40  Score=266.86  Aligned_cols=230  Identities=31%  Similarity=0.483  Sum_probs=202.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus         5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35568999999999999999                   44555666666666666788899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++ +.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|++
T Consensus        85 ~~-~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  161 (255)
T 1fmc_A           85 KL-GKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HH-SSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             hc-CCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            99 89999999999876 4444 788999999999999999999999999999887899999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||++++.++++++.|++++||+++.++||++.|++.+... .+..........|.+++.+|+|+|+.+++|+++.+.+++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (255)
T 1fmc_A          162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS  240 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCC
Confidence            9999999999999999999999999999999999865432 344455556677888999999999999999998888899


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      |+.+.+|||...+
T Consensus       241 G~~~~v~gg~~~s  253 (255)
T 1fmc_A          241 GQILTVSGGGVQE  253 (255)
T ss_dssp             SCEEEESTTSCCC
T ss_pred             CcEEEECCceecc
Confidence            9999999998654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.8e-40  Score=272.26  Aligned_cols=218  Identities=20%  Similarity=0.215  Sum_probs=167.1

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+..+.+|++|||||++|||                   +.+.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            45678899999999999999                   333444444443   24677889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccCCCCChhh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      ++ +++|+||||||...+..++.+.+.++|++.+++|+.+++.++++++|+|++++  .|+||++||.++..+.++...|
T Consensus        99 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  177 (272)
T 4dyv_A           99 KF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPY  177 (272)
T ss_dssp             HH-SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHH
Confidence            99 89999999999876456788999999999999999999999999999999876  6899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.+......   .......|.+++.+|+|+|++++||++.....
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          178 TATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV---PQADLSIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             HHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc---hhhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence            999999999999999999999999999999999999987653321   12223457778899999999999999966554


Q ss_pred             ccccEE
Q 041276          230 ITGQTI  235 (251)
Q Consensus       230 ~~G~~i  235 (251)
                      ..++..
T Consensus       255 ~~~~i~  260 (272)
T 4dyv_A          255 NVQFMT  260 (272)
T ss_dssp             CCCEEE
T ss_pred             ccceEE
Confidence            444333

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-40  Score=271.17  Aligned_cols=228  Identities=29%  Similarity=0.445  Sum_probs=187.9

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-------CeeEEEeccCCCHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-------FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ++++|+||||||++|||                   +.+.++++.+++.+.+       .++.++.+|++|+++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999                   3334444444443333       467889999999999999999


Q ss_pred             HHHHhcCCCc-cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCC
Q 041276           68 QVSSLFNGKL-NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        68 ~i~~~~~~~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~  145 (251)
                      ++.+.+ +++ |+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++++ .|+||++||..+..+.++
T Consensus        84 ~~~~~~-g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (264)
T 2pd6_A           84 QVQACF-SRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG  161 (264)
T ss_dssp             HHHHHH-SSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHh-CCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence            999999 888 99999999876 56777889999999999999999999999999998876 689999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ...|++||++++.++++++.|++++||+++.|+||++.|++.....  +.....+....|.+++.+|+|+|+.+++++++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  239 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP--QKVVDKITEMIPMGHLGDPEDVADVVAFLASE  239 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC--HHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999876432  22333344456778889999999999999998


Q ss_pred             CCCCccccEEEeCCCccccc
Q 041276          226 AASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~~  245 (251)
                      .+.+++|+.+.+|||+.+..
T Consensus       240 ~~~~~~G~~~~v~gg~~~~~  259 (264)
T 2pd6_A          240 DSGYITGTSVEVTGGLFMAE  259 (264)
T ss_dssp             GGTTCCSCEEEESTTC----
T ss_pred             cccCCCCCEEEECCCceecc
Confidence            88899999999999998754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.1e-41  Score=283.55  Aligned_cols=226  Identities=20%  Similarity=0.245  Sum_probs=186.6

Q ss_pred             cCCCCCEEEEecC--CCCcCcHHHHHHHHHHHHhcCCeeEEE------------------------------------ec
Q 041276           13 WSLQGMTALVTGG--TKGLGNEAELNECLREWKTKCFKVTGS------------------------------------VC   54 (251)
Q Consensus        13 ~~l~~k~vlItGa--s~giG~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~   54 (251)
                      +++++|++|||||  ++|||     .++++.+.+.|.++...                                    .+
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG-----~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYG-----WAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPL   79 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHH-----HHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEEC
T ss_pred             ccCCCCEEEEeCCCCCCChH-----HHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccc
Confidence            3578999999999  89999     56666665555444332                                    22


Q ss_pred             c------------CC--------CHHHHHHHHHHHHHhcCCCccEEEEcccCCC-CCCCCCCCCHHHHHHHHHhhhHHHH
Q 041276           55 D------------AS--------SRAEREKLMKQVSSLFNGKLNILINNVGTNY-TTKPTVEYMAEDLSFLMSTNFESAY  113 (251)
Q Consensus        55 D------------~~--------~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~  113 (251)
                      |            ++        |+++++++++++.+++ +++|+||||||+.. ...++.+.+.++|++.+++|+.+++
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  158 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV  158 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence            2            22        2558999999999999 89999999999763 2457788999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCceEEEecccccccCCCCC-hhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCCC
Q 041276          114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPYL  191 (251)
Q Consensus       114 ~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~~  191 (251)
                      .++++++|+|++.  |+||++||.++..+.+.+ ..|++||+|+..|+++++.|+++ +||+||+|+||+++|++.+...
T Consensus       159 ~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~  236 (315)
T 2o2s_A          159 SLLQHFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG  236 (315)
T ss_dssp             HHHHHHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred             HHHHHHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence            9999999999763  899999999999888877 58999999999999999999985 8999999999999999864432


Q ss_pred             C--C----HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccccc
Q 041276          192 S--D----EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       192 ~--~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      .  .    +...+.+....|.+++.+|+|+|+.++||+++.+.++||+.|.+|||+++...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  297 (315)
T 2o2s_A          237 KSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQ  297 (315)
T ss_dssp             CSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             ccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeecc
Confidence            1  1    12223334457899999999999999999999999999999999999987543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-40  Score=274.16  Aligned_cols=242  Identities=32%  Similarity=0.454  Sum_probs=198.6

Q ss_pred             CCccCCCCCCc-ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-----cCCeeEEEecc
Q 041276            1 MAQAYDHDRQD-RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-----KCFKVTGSVCD   55 (251)
Q Consensus         1 m~~~~~~~~~~-~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-----~~~~~~~~~~D   55 (251)
                      |+++..+.... ...+++|+||||||++|||                   +.+.++++.+++..     .+.++.++.+|
T Consensus         1 ~~~~~~~~~~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D   80 (303)
T 1yxm_A            1 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN   80 (303)
T ss_dssp             ------CCCSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECC
T ss_pred             CccccccCCccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecC
Confidence            55555444433 3468999999999999999                   44556666666654     35678899999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEec
Q 041276           56 ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVS  135 (251)
Q Consensus        56 ~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vs  135 (251)
                      ++++++++++++++.+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.+.+++.++||++|
T Consensus        81 ~~~~~~v~~~~~~~~~~~-g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~is  158 (303)
T 1yxm_A           81 IRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNII  158 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHc-CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence            999999999999999999 89999999999765 5677788999999999999999999999999976655569999999


Q ss_pred             ccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC-CCCCC-CHHHHHHHhhCCCCCCCCCHH
Q 041276          136 SVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT-EPYLS-DEKFLEEVKCRTPMERPGEPK  213 (251)
Q Consensus       136 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  213 (251)
                      |.+ ..+.+....|+++|+++..++++++.|+.++||++++|+||++.|++. ..... .+..........|.+++.+|+
T Consensus       159 S~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  237 (303)
T 1yxm_A          159 VPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE  237 (303)
T ss_dssp             CCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH
T ss_pred             eec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHH
Confidence            998 778888899999999999999999999999999999999999999952 11110 122233344557888899999


Q ss_pred             HHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          214 EVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       214 dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      |+|+.+++|+++.+.+++|+.+.+|||..+..
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeeccc
Confidence            99999999999888999999999999988754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.8e-39  Score=266.96  Aligned_cols=237  Identities=24%  Similarity=0.395  Sum_probs=196.1

Q ss_pred             CCCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +....+++++|+||||||++|||                   +...++++.+++... .++.++.+|++|++++++++++
T Consensus         7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A            7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHH
Confidence            34456678999999999999999                   222233333333221 2678899999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-CC
Q 041276           69 VSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-LG  146 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~  146 (251)
                      +.+.+ +++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+ ..
T Consensus        86 ~~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  164 (278)
T 2bgk_A           86 TIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVS  164 (278)
T ss_dssp             HHHHH-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSC
T ss_pred             HHHHc-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCC
Confidence            99999 899999999998642 3567788999999999999999999999999999988889999999999998887 78


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhC--CCCCCCCCHHHHHHHHHHHc
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCR--TPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~  223 (251)
                      ..|++||++++.++++++.|++++||+++.|+||++.|++...... .+.....+...  .+.+++.+|+|+|+.+++|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA  244 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHc
Confidence            8999999999999999999999999999999999999999876543 23333333222  35577899999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccccc
Q 041276          224 MPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      ++.+.+++|+.+.+|||..+...
T Consensus       245 ~~~~~~~~G~~~~v~gg~~~~~~  267 (278)
T 2bgk_A          245 GDESKYVSGLNLVIDGGYTRTNP  267 (278)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCCT
T ss_pred             CcccccCCCCEEEECCcccccCC
Confidence            98888999999999999877543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3e-40  Score=269.74  Aligned_cols=229  Identities=28%  Similarity=0.451  Sum_probs=195.2

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ..+++++|++|||||++|||                   +.....+..+++.+ .+.++.++.+|++|+++++++++++.
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            34568899999999999999                   11222222333322 24568889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCC----
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNL----  145 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~----  145 (251)
                      +.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.+.    
T Consensus        88 ~~~-~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  165 (265)
T 1h5q_A           88 ADL-GPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  165 (265)
T ss_dssp             HHS-CSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             Hhc-CCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence            999 89999999999876 66777899999999999999999999999999998765 489999999988766532    


Q ss_pred             ---ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          146 ---GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       146 ---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                         ...|++||++++.++++++.|++++||+++.|+||++.|++....  .+.....+....|.+++.+|+|+|+.+++|
T Consensus       166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (265)
T 1h5q_A          166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILL  243 (265)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhh
Confidence               679999999999999999999999999999999999999987654  344455556678888999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 041276          223 CMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++.+.+++|+.+.+|||+++
T Consensus       244 ~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          244 LSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             ccCchhcCcCcEEEecCCEeC
Confidence            998889999999999999875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=6.9e-40  Score=265.07  Aligned_cols=225  Identities=31%  Similarity=0.444  Sum_probs=197.5

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|++|||||++|||                   +.+.++++.+++.. .+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999                   34445555555544 35578889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|+++|
T Consensus        84 -~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           84 -DGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             -SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence             89999999999876 5667788999999999999999999999999999988789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.++++++.|+.++||+++.++||++.|++....  .+.....+....|.+++.+|+|+|+.+++|+++...+++|+
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGE  239 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCc
Confidence            9999999999999999999999999999999987653  23444455566788889999999999999999888899999


Q ss_pred             EEEeCCCcc
Q 041276          234 TICVDGGFT  242 (251)
Q Consensus       234 ~i~vdgG~~  242 (251)
                      .+.+|||+.
T Consensus       240 ~~~v~gg~~  248 (248)
T 2pnf_A          240 VIHVNGGMF  248 (248)
T ss_dssp             EEEESTTCC
T ss_pred             EEEeCCCcC
Confidence            999999963

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=3.5e-40  Score=269.41  Aligned_cols=223  Identities=23%  Similarity=0.363  Sum_probs=185.1

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..+++++|+||||||++|||     .++++.+.+.                     +.++.++.+|++|+++++++++++
T Consensus         6 ~~~~~~~k~vlVTGasggiG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLG-----LATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            34578999999999999999     4444444333                     235677899999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCC------CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCceEEEeccc
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTV------EYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS------GAGNIILVSSV  137 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~~g~iv~vss~  137 (251)
                      .+.+ +++|+||||||... ..++.      +.+.++|++.+++|+.+++.+++.+.|+|+++      +.++||++||.
T Consensus        81 ~~~~-g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           81 KGKF-GRVDVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHH-SCCCEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHC-CCCCEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            9999 89999999999876 33333      47899999999999999999999999999987      67899999999


Q ss_pred             ccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHH
Q 041276          138 CGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVS  216 (251)
Q Consensus       138 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  216 (251)
                      .+..+.++...|++||++++.++++++.|++++||+||.|+||+++|++.+...  +.....+....|. +++.+|+|+|
T Consensus       159 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva  236 (265)
T 2o23_A          159 AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYA  236 (265)
T ss_dssp             HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHH
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC--HHHHHHHHHcCCCcCCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999999876532  2223334456677 7889999999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          217 SLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +.+++|++  +.+++|+.|.+|||+++.
T Consensus       237 ~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          237 HLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHhh--cCccCceEEEECCCEecC
Confidence            99999994  578999999999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-40  Score=274.00  Aligned_cols=224  Identities=23%  Similarity=0.284  Sum_probs=180.1

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFK-VTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..++++|++|||||++|||                   +.+.++++.+++...+.. +.++.+|++|+++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4568999999999999999                   455566666666554333 48899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccCCCCChhh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+ +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++  .|+||++||.++..+.++...|
T Consensus       108 ~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  186 (281)
T 4dry_A          108 EF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPY  186 (281)
T ss_dssp             HH-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhH
Confidence            99 89999999999876457888999999999999999999999999999999875  6899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC-C
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA-S  228 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~  228 (251)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.+.......   ......+.+++.+|+|+|++++||++... .
T Consensus       187 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~  263 (281)
T 4dry_A          187 TATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL---QANGEVAAEPTIPIEHIAEAVVYMASLPLSA  263 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE---CTTSCEEECCCBCHHHHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh---hhhhcccccCCCCHHHHHHHHHHHhCCCccC
Confidence            9999999999999999999999999999999999999865432110   11123466778899999999999998554 4


Q ss_pred             CccccEEEeCC
Q 041276          229 YITGQTICVDG  239 (251)
Q Consensus       229 ~~~G~~i~vdg  239 (251)
                      .+++..|.-..
T Consensus       264 ~i~~~~i~p~~  274 (281)
T 4dry_A          264 NVLTMTVMATR  274 (281)
T ss_dssp             EEEEEEEEETT
T ss_pred             ccccEEEEecc
Confidence            55565555443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.2e-41  Score=273.23  Aligned_cols=223  Identities=19%  Similarity=0.189  Sum_probs=186.7

Q ss_pred             cCCCCCEEEEecCCCCcC----------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG----------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      .++++|++|||||++|||                      +.+.++++.+++...  +.++.++.+|+++++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999                      123334444444433  45788899999999999999999


Q ss_pred             HHH--hcCCCcc--EEEEcccCCCCC-CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCceEEEecccccc
Q 041276           69 VSS--LFNGKLN--ILINNVGTNYTT-KPTVE-YMAEDLSFLMSTNFESAYHLSQLAHPLLKAS--GAGNIILVSSVCGV  140 (251)
Q Consensus        69 i~~--~~~~~id--~lv~~ag~~~~~-~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~g~iv~vss~~~~  140 (251)
                      +.+  .+ +++|  +||||||..... .++.+ .+.++|++.+++|+.+++.++++++|+|+++  +.|+||++||.++.
T Consensus        82 ~~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           82 VRELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            988  66 7899  999999986422 45667 7899999999999999999999999999887  56899999999999


Q ss_pred             cCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---CCHHHHHHHhhCCCCCCCCCHHHHHH
Q 041276          141 LSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---SDEKFLEEVKCRTPMERPGEPKEVSS  217 (251)
Q Consensus       141 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~  217 (251)
                      .+.++...|++||+|++.|+++++.|+++  |+||+|+||+++|+|.+...   ..++....+....|.+++.+|+|+|+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  238 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQ  238 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHH
Confidence            99999999999999999999999999874  99999999999999865321   12333444445567888999999999


Q ss_pred             HHHHHcCCCCCCccccEEEeCC
Q 041276          218 LVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      .+++|+++ .+++|||.|.+||
T Consensus       239 ~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          239 KLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHhh-ccccCCcEEeccC
Confidence            99999985 7899999999986

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.3e-41  Score=285.24  Aligned_cols=184  Identities=21%  Similarity=0.266  Sum_probs=130.7

Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEEcccCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccc
Q 041276           59 RAEREKLMKQVSSLFNGKLNILINNVGTNY-TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSV  137 (251)
Q Consensus        59 ~~~~~~~~~~i~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~  137 (251)
                      +++++++++++.+++ +++|+||||||+.. ...++.+.+.++|++.+++|+.+++.++++++|+|++.  |+||++||.
T Consensus       117 ~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~  193 (319)
T 2ptg_A          117 GFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG--GSALALSYI  193 (319)
T ss_dssp             CCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC--ceEEEEecc
Confidence            347899999999999 89999999999763 24677889999999999999999999999999999763  899999999


Q ss_pred             ccccCCCCC-hhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCCCCC--H----HHHHHHhhCCCCCCC
Q 041276          138 CGVLSTNLG-TIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPYLSD--E----KFLEEVKCRTPMERP  209 (251)
Q Consensus       138 ~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~~~~--~----~~~~~~~~~~~~~~~  209 (251)
                      ++..+.+.. ..|++||+|+..|+++++.|+++ +||+||+|+||+++|+|.+.....  +    ...+.+....|.+++
T Consensus       194 ~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  273 (319)
T 2ptg_A          194 ASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKE  273 (319)
T ss_dssp             C------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------C
T ss_pred             ccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCC
Confidence            999888877 68999999999999999999985 899999999999999997654211  1    111222345688899


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      .+|+|+|+.++||+++.+.++||+.|.+|||+++..
T Consensus       274 ~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  309 (319)
T 2ptg_A          274 LESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG  309 (319)
T ss_dssp             CCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred             CCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence            999999999999999999999999999999998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-40  Score=266.69  Aligned_cols=222  Identities=27%  Similarity=0.391  Sum_probs=185.0

Q ss_pred             CCCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe---------------ccCCCHHHHHHHHHHHHHh
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV---------------CDASSRAEREKLMKQVSSL   72 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~---------------~D~~~~~~~~~~~~~i~~~   72 (251)
                      +.+...++++|++|||||++|||     .++++.+.+.|.++....               +|+  .++++++++++   
T Consensus        10 ~~~~~~~~~~k~vlVTGas~gIG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~D~--~~~~~~~~~~~---   79 (249)
T 1o5i_A           10 HHHMELGIRDKGVLVLAASRGIG-----RAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDL--RKDLDLLFEKV---   79 (249)
T ss_dssp             ------CCTTCEEEEESCSSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCT--TTCHHHHHHHS---
T ss_pred             hhhHHhccCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEcCCHHHHHhhCCeEEEeeH--HHHHHHHHHHh---
Confidence            34456778999999999999999     777777776665443321               677  44566666543   


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                        .++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.+....|++|
T Consensus        80 --~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (249)
T 1o5i_A           80 --KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA  156 (249)
T ss_dssp             --CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             --cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHH
Confidence              58999999999875 667788999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH-HHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE-EVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      |++++.|+++++.|++++||+||+|+||+++|++.....  +.... .+....|.+++.+|+|+|+.+++|+++.+.+++
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~t  234 (249)
T 1o5i_A          157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT  234 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            999999999999999999999999999999999865432  12233 455667888999999999999999998899999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      |+.+.+|||+...
T Consensus       235 G~~~~vdgG~~~~  247 (249)
T 1o5i_A          235 GQTIVVDGGLSKF  247 (249)
T ss_dssp             SCEEEESTTCCCC
T ss_pred             CCEEEECCCcccC
Confidence            9999999998653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.3e-40  Score=268.60  Aligned_cols=224  Identities=22%  Similarity=0.317  Sum_probs=179.5

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+++ |++|||||++|||                   +.+.++++.+++... .++.++.+|++|+++++++++++.+.
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45566 9999999999999                   445555555555443 46888999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCc-eEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++.| +||++||.++..+.+....|++
T Consensus        95 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~a  173 (272)
T 2nwq_A           95 F-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGG  173 (272)
T ss_dssp             G-SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             h-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHH
Confidence            9 8999999999987533678889999999999999999999999999999988778 9999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      ||++++.|+++++.|++++||+||+|+||+++|++...... ..+...   .......+.+|+|+|+.+++|+++ ..++
T Consensus       174 sKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~~~~pedvA~~v~~l~s~-~~~~  249 (272)
T 2nwq_A          174 TKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYD---KTYAGAHPIQPEDIAETIFWIMNQ-PAHL  249 (272)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------CCCCBCHHHHHHHHHHHHTS-CTTE
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHH---HhhccCCCCCHHHHHHHHHHHhCC-CccC
Confidence            99999999999999999999999999999999998654221 111111   111122357999999999999985 5789


Q ss_pred             cccEEEeCCCcc
Q 041276          231 TGQTICVDGGFT  242 (251)
Q Consensus       231 ~G~~i~vdgG~~  242 (251)
                      +|+.|.+++|..
T Consensus       250 ~g~~i~v~~~~~  261 (272)
T 2nwq_A          250 NINSLEIMPVSQ  261 (272)
T ss_dssp             EEEEEEEEETTE
T ss_pred             ccceEEEeeccC
Confidence            999999999854

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-40  Score=269.24  Aligned_cols=224  Identities=22%  Similarity=0.305  Sum_probs=180.7

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh-c
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL-F   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~   73 (251)
                      ++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            36789999999999999                   455666667777666778899999999999999999999886 7


Q ss_pred             CCCccEEEEcccC--C----CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           74 NGKLNILINNVGT--N----YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        74 ~~~id~lv~~ag~--~----~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                       +++|+||||||.  .    ....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+. ...
T Consensus        82 -g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 -GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             -TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred             -CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence             899999999953  2    12456778888999999999999999999999999998888999999999987754 468


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHH-HH-Hh-hCCCCCCCCCHHHHHHHHHHHcC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFL-EE-VK-CRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      .|++||++++.|+++++.|++++||+||+|+||+++|+|.......+... .. .. ...|.++..+|+|+|+.++||++
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s  239 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999976533221110 10 11 12345566789999999999999


Q ss_pred             CCC-CCccccEEEeCC
Q 041276          225 PAA-SYITGQTICVDG  239 (251)
Q Consensus       225 ~~~-~~~~G~~i~vdg  239 (251)
                      +.+ .++|||.|.+|+
T Consensus       240 ~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          240 DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CTTGGGGTTCEEEHHH
T ss_pred             Ccccccccceeechhh
Confidence            876 489999999873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=5.4e-40  Score=267.09  Aligned_cols=226  Identities=25%  Similarity=0.390  Sum_probs=198.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------c-HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG-------------------N-EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|+||||||++|||                   + .+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999                   2 445556666666656688899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--C---ceEEEeccccccc-CCCCCh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--A---GNIILVSSVCGVL-STNLGT  147 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~---g~iv~vss~~~~~-~~~~~~  147 (251)
                       +++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++  .   ++||++||..+.. +.++..
T Consensus        84 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (258)
T 3afn_B           84 -GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG  162 (258)
T ss_dssp             -SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred             -CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence             89999999999833366778899999999999999999999999999998654  3   8999999999987 788899


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .|++||++++.+++.++.|++++||+++.|+||++.|++....  .+.....+....|.+++.+|+|+|+.+++++++..
T Consensus       163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  240 (258)
T 3afn_B          163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLA  240 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcch
Confidence            9999999999999999999999999999999999999987654  34555556667788899999999999999998766


Q ss_pred             C-CccccEEEeCCCcc
Q 041276          228 S-YITGQTICVDGGFT  242 (251)
Q Consensus       228 ~-~~~G~~i~vdgG~~  242 (251)
                      . +++|+.+.+|||.+
T Consensus       241 ~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          241 SGYITGQVLDINGGQY  256 (258)
T ss_dssp             HTTCCSEEEEESTTSS
T ss_pred             hccccCCEEeECCCcc
Confidence            6 89999999999975

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.4e-39  Score=261.47  Aligned_cols=220  Identities=27%  Similarity=0.409  Sum_probs=187.2

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++++|+||||||++|||     .++++.+.+.|.                    .+.++.+|++|+++++++++    .
T Consensus         3 ~~l~~k~vlITGasggiG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIG-----RGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCCTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----T
T ss_pred             cccCCcEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH----H
Confidence            457899999999999999     333333333222                    23456899999999998886    4


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.+.|+|++++ .++||++||..+..+.+....|++
T Consensus        74 ~-~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  151 (244)
T 3d3w_A           74 V-GPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             C-CCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             c-CCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHH
Confidence            5 78999999999876 56777889999999999999999999999999998876 699999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||++++.++++++.|++++||+++.|+||++.|++.......+.....+....|.+++.+|+|+|+.+++|+++.+.+++
T Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 3d3w_A          152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            99999999999999999999999999999999998653322333334555667888999999999999999998888999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |+.+.+|||+++
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 3d3w_A          232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999865

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-39  Score=262.19  Aligned_cols=205  Identities=19%  Similarity=0.184  Sum_probs=169.2

Q ss_pred             CCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           16 QGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        16 ~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      .+|++|||||++|||                   +.+.++++.+++.   .++.++.+|++|+++++++++++.+.+ ++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   77 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWG-GL   77 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            579999999999999                   3444555555542   257889999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ ++||++||.++..+.+....|++||+|+
T Consensus        78 id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           78 PELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM  155 (235)
T ss_dssp             CSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred             CcEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence            999999999875 67788899999999999999999999999999998876 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC-CCCCCccccEE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAASYITGQTI  235 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~i  235 (251)
                      ++|+++++.|++++||+||+|+||+++|++......           .+..++.+|+|+|+.+++|++ +.+.+++|-.+
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~  224 (235)
T 3l6e_A          156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI  224 (235)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEE
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEE
Confidence            999999999999999999999999999998754321           234477899999999999998 56678888665


Q ss_pred             Ee
Q 041276          236 CV  237 (251)
Q Consensus       236 ~v  237 (251)
                      .-
T Consensus       225 ~~  226 (235)
T 3l6e_A          225 GR  226 (235)
T ss_dssp             EE
T ss_pred             ec
Confidence            53

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.9e-40  Score=296.49  Aligned_cols=215  Identities=25%  Similarity=0.393  Sum_probs=179.9

Q ss_pred             cCCCCCEEEEecCCCCcC-----------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           13 WSLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .++++|++|||||++|||                 +...++++.+++.+.+.++..+.+|++  ++.+++++++.++| |
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~-G  394 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY-G  394 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH-S
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc-C
Confidence            468999999999999999                 111233444555555556666777773  55678899999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.++...|++||+|
T Consensus       395 ~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaa  473 (604)
T 2et6_A          395 TIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAG  473 (604)
T ss_dssp             CCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHH
Confidence            9999999999876 677889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      +.+|+++|+.|++++||+||+|+||. .|+|.......+           .....+|+|+|+.++||+++.+. +|||.|
T Consensus       474 l~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~-----------~~~~~~pe~vA~~v~~L~s~~~~-itG~~~  540 (604)
T 2et6_A          474 ILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ-----------DKNLYHADQVAPLLVYLGTDDVP-VTGETF  540 (604)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh-----------hccCCCHHHHHHHHHHHhCCccC-CCCcEE
Confidence            99999999999999999999999996 999875432110           12345899999999999999988 999999


Q ss_pred             EeCCCcccc
Q 041276          236 CVDGGFTVN  244 (251)
Q Consensus       236 ~vdgG~~~~  244 (251)
                      .+|||+...
T Consensus       541 ~vdGG~~~~  549 (604)
T 2et6_A          541 EIGGGWIGN  549 (604)
T ss_dssp             EEETTEEEE
T ss_pred             EECCCeeEe
Confidence            999998763

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.2e-39  Score=260.69  Aligned_cols=222  Identities=31%  Similarity=0.481  Sum_probs=194.6

Q ss_pred             CCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEE-EeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTG-SVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +|++|||||++|||                    +.+.++++.+++...+.++.+ +.+|++|.++++++++++.+.+ +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence            48999999999999                    234444555555555556666 8999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|++||++
T Consensus        80 ~~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           80 GLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            9999999999875 567778999999999999999999999999999998878999999999998888889999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.++++++.|+.++||+++.|+||++.|++.+..  .+.....+....|.+++.+|+|+|+.+++++++...+++|+.+
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  236 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTL  236 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEE
Confidence            99999999999999999999999999999987653  2344455556678888999999999999999988889999999


Q ss_pred             EeCCCcc
Q 041276          236 CVDGGFT  242 (251)
Q Consensus       236 ~vdgG~~  242 (251)
                      .+|||..
T Consensus       237 ~v~gg~~  243 (245)
T 2ph3_A          237 CVDGGLT  243 (245)
T ss_dssp             EESTTCS
T ss_pred             EECCCCC
Confidence            9999975

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=4.3e-39  Score=258.65  Aligned_cols=212  Identities=19%  Similarity=0.216  Sum_probs=185.8

Q ss_pred             CCCEEEEecCCCCcC-------------------cHHHHHHHHHHHH-hcCCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLG-------------------NEAELNECLREWK-TKCFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG-------------------~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      ++|++|||||++|||                   +.+.++++.+++. ..+.++.++.+|++|+++++++++++.+.+ +
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence            469999999999999                   4556666666665 446788999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ .+++|+++|..+..+.+....|++||+|
T Consensus        80 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           80 DVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             SCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCCCcchHHHHHHH
Confidence            9999999999876 7788899999999999999999999999999999544 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.|+++++.  ..+||+||+|+||+++|++.+.......          ..++.+|+|+|+.+++|+++...+++|+.+
T Consensus       158 ~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~~p~dva~~v~~l~~~~~~~~~~~~~  225 (235)
T 3l77_A          158 ARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPGKPK----------EKGYLKPDEIAEAVRCLLKLPKDVRVEELM  225 (235)
T ss_dssp             HHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSCCCG----------GGTCBCHHHHHHHHHHHHTSCTTCCCCEEE
T ss_pred             HHHHHHHHhh--cCCCeEEEEEeCCccccccccccCCccc----------ccCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence            9999999944  4779999999999999999876543221          125679999999999999999999999999


Q ss_pred             EeCCCcc
Q 041276          236 CVDGGFT  242 (251)
Q Consensus       236 ~vdgG~~  242 (251)
                      ..|+|+.
T Consensus       226 ~~~~~~~  232 (235)
T 3l77_A          226 LRSVYQR  232 (235)
T ss_dssp             ECCTTSC
T ss_pred             EeecccC
Confidence            9999974

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3.7e-39  Score=261.09  Aligned_cols=217  Identities=23%  Similarity=0.308  Sum_probs=173.8

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |++|||||++|||                   +.+.++++.+++.   .++.++.+|++|+++++++++++.+.+ +++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            6899999999999                   3333444444332   357788999999999999999999988 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      +||||||+.....++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.++...|++||++++.
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            99999998643567788999999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCccc-CCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          159 LAKNLACEWARDNIRINSVAPWFIT-TPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                      |+++++.|++++||+||+|+||+++ |++...... .++....   ......+.+|+|+|+.+++|+++ ..+++|+.+.
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~---~~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~  232 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK---TYQNTVALTPEDVSEAVWWVSTL-PAHVNINTLE  232 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHH---HHhccCCCCHHHHHHHHHHHhcC-CccceeeEEE
Confidence            9999999999999999999999999 998643211 1111111   11122346899999999999986 5689999999


Q ss_pred             eCCCcc
Q 041276          237 VDGGFT  242 (251)
Q Consensus       237 vdgG~~  242 (251)
                      ++++..
T Consensus       233 v~~~~~  238 (248)
T 3asu_A          233 MMPVTQ  238 (248)
T ss_dssp             ECCTTC
T ss_pred             Eccccc
Confidence            998743

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.5e-39  Score=292.75  Aligned_cols=214  Identities=24%  Similarity=0.365  Sum_probs=182.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cH---------HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NE---------AELNECLREWKTKCFKVTGSVCDASSRAEREK   64 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   64 (251)
                      +++++|++|||||++|||                   +.         +.++++.+++.+.+.++   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            357899999999999999                   11         33455556665555443   257777777899


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC
Q 041276           65 LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN  144 (251)
Q Consensus        65 ~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~  144 (251)
                      +++++.++| |++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.+
T Consensus        81 ~v~~~~~~~-G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           81 IVETAVKNF-GTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHH-SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999 89999999999875 6678899999999999999999999999999999988889999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      +...|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|...... ++.    .      ...+|+|+|..++||++
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~~----~------~~~~pe~vA~~v~~L~s  226 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PPM----L------EKLGPEKVAPLVLYLSS  226 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HHH----H------TTCSHHHHHHHHHHHTS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hhh----h------ccCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999998 68887544322 111    1      12489999999999999


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 041276          225 PAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +. .++|||.|.+|||+...
T Consensus       227 ~~-~~itG~~~~vdgG~~~~  245 (604)
T 2et6_A          227 AE-NELTGQFFEVAAGFYAQ  245 (604)
T ss_dssp             SS-CCCCSCEEEEETTEEEE
T ss_pred             Cc-ccCCCCEEEECCCeEEE
Confidence            88 99999999999997644

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-39  Score=263.02  Aligned_cols=229  Identities=25%  Similarity=0.381  Sum_probs=197.2

Q ss_pred             CcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ...+++++|+||||||++|||                    +.+.++++.+++...+.++.++.+|++|+++++++++++
T Consensus        14 ~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            345678999999999999999                    234455566666666667889999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~  148 (251)
                      .+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++++|++ + ++||++||.++. .+.+....
T Consensus        94 ~~~~-~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~  169 (274)
T 1ja9_A           94 VSHF-GGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHAL  169 (274)
T ss_dssp             HHHH-SCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHH
T ss_pred             HHHc-CCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCch
Confidence            9999 89999999999876 667778999999999999999999999999999983 3 899999999998 77888899


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCC-----------CCCCHHHHHHHhhCCCCCCCCCHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP-----------YLSDEKFLEEVKCRTPMERPGEPKEVSS  217 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dva~  217 (251)
                      |++||++++.++++++.|++.+||+++.++||++.|++...           ....++....+....|.+++.+|+|+|+
T Consensus       170 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  249 (274)
T 1ja9_A          170 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHH
Confidence            99999999999999999999999999999999999997641           1111344455556778889999999999


Q ss_pred             HHHHHcCCCCCCccccEEEeCCCcc
Q 041276          218 LVAFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      .+++|+++...+++|+.+.+|||+.
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCcccccccCcEEEecCCcC
Confidence            9999999888889999999999963

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-39  Score=257.91  Aligned_cols=220  Identities=28%  Similarity=0.422  Sum_probs=188.7

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .++++|++|||||++|||     .++++.+.+.|.                    .+.++.+|++|+++++++++    .
T Consensus         3 ~~~~~~~vlVTGasggiG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIG-----RDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG----G   73 (244)
T ss_dssp             CCCTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----T
T ss_pred             cCCCCCEEEEeCCCchHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH----H
Confidence            357899999999999999     444444433332                    24456899999999998886    4


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.+.|.|++++ .++||++||..+..+.+....|++
T Consensus        74 ~-~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  151 (244)
T 1cyd_A           74 I-GPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSS  151 (244)
T ss_dssp             C-CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             c-CCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHH
Confidence            5 78999999999876 56777889999999999999999999999999998876 699999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||++++.++++++.|++++||+++.++||++.|++.......+.+...+....|.+++.+|+|+|+.+++++++.+.+++
T Consensus       152 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 1cyd_A          152 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhccc
Confidence            99999999999999999999999999999999998654333445545555667888899999999999999998888999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      |+.+.+|||+.+
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 1cyd_A          232 GGGILVDAGYLA  243 (244)
T ss_dssp             SSEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999865

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.6e-39  Score=262.53  Aligned_cols=221  Identities=19%  Similarity=0.217  Sum_probs=190.7

Q ss_pred             CcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE------------EeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           10 QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG------------SVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~------------~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      .+..+..+|+||||||++|||     .++++.+.+.|.++..            +.+|++|.++++++++++.+.+ +++
T Consensus        15 ~~~~~~m~k~vlITGas~gIG-----~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~-g~i   88 (251)
T 3orf_A           15 VPRGSHMSKNILVLGGSGALG-----AEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKS-IKV   88 (251)
T ss_dssp             -------CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTT-CCE
T ss_pred             cccccccCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHc-CCC
Confidence            344455689999999999999     8999999888876654            4689999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+||||||.........+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.+....|++||+|++
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATH  166 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHH
Confidence            999999998764444678889999999999999999999999999976  389999999999999999999999999999


Q ss_pred             HHHHHHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC-CCCCccccE
Q 041276          158 QLAKNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP-AASYITGQT  234 (251)
Q Consensus       158 ~~~~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~  234 (251)
                      .|+++++.|++  ++||+||+|+||+++|++.+..          ....+.+++.+|+|+|+.+++|+++ .+.++||+.
T Consensus       167 ~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~  236 (251)
T 3orf_A          167 HIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY----------MSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSL  236 (251)
T ss_dssp             HHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH----------CTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCE
T ss_pred             HHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh----------cccccccccCCHHHHHHHHHHHhcCccccCCcceE
Confidence            99999999987  8899999999999999875432          2234566788999999999999998 889999999


Q ss_pred             EEeCCCcccccccc
Q 041276          235 ICVDGGFTVNGFFF  248 (251)
Q Consensus       235 i~vdgG~~~~~~~~  248 (251)
                      |.+++|..+..+.|
T Consensus       237 i~v~~g~~~~~~~~  250 (251)
T 3orf_A          237 VKFETKSKVTTWTN  250 (251)
T ss_dssp             EEEEEETTEEEEEE
T ss_pred             EEEecCCccceecc
Confidence            99999988776543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-37  Score=251.65  Aligned_cols=214  Identities=21%  Similarity=0.307  Sum_probs=187.5

Q ss_pred             CCEEEEecCCCCcCc--------------------------HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGN--------------------------EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        17 ~k~vlItGas~giG~--------------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +|+||||||++|||.                          .+.++.+.+++...+.++.++.+|++++++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            689999999999991                          122333344444445578889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+
T Consensus        82 ~~~-g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (244)
T 2bd0_A           82 ERY-GHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC  159 (244)
T ss_dssp             HHT-SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhC-CCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence            999 89999999999875 6677889999999999999999999999999999988789999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +||++++.|+++++.|+.++||+++.|+||++.|++........           ..++.+|+|+|+.+++++++...++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~dva~~~~~l~~~~~~~~  228 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTV  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHHHHHHHHHHHHhCCcccc
Confidence            99999999999999999999999999999999999976542211           1256799999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      +|+.+..++|..+
T Consensus       229 ~g~~~~~~~~~~~  241 (244)
T 2bd0_A          229 VEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEETTCCC
T ss_pred             chheEEecccccc
Confidence            9999999999776

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.1e-38  Score=267.01  Aligned_cols=211  Identities=26%  Similarity=0.383  Sum_probs=182.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE------------------------------EeccCCCHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG------------------------------SVCDASSRAER   62 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~------------------------------~~~D~~~~~~~   62 (251)
                      +++++|++|||||++|||     .++++.|.+.|.++..                              ..+|+++.+++
T Consensus         5 ~~l~gk~~lVTGas~GIG-----~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLG-----RAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHH
Confidence            568999999999999999     5566666555554443                              24799999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC
Q 041276           63 EKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS  142 (251)
Q Consensus        63 ~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~  142 (251)
                      +++++++.+.+ +++|+||||||+.. ..++.+.+.++|+..+++|+.+++.+++.++|+|++++.|+||++||.++..+
T Consensus        80 ~~~~~~~~~~~-g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~  157 (319)
T 1gz6_A           80 EKLVKTALDTF-GRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG  157 (319)
T ss_dssp             HHHHHHHHHHT-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC
Confidence            99999999999 89999999999876 56677899999999999999999999999999999888899999999999988


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      .++...|++||+|+..|++++++|++++||+||+|+||++ |++.+...+ +....          ..+|+|+|+.++||
T Consensus       158 ~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~~~~~----------~~~p~dvA~~~~~l  225 (319)
T 1gz6_A          158 NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-EDLVE----------ALKPEYVAPLVLWL  225 (319)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-HHHHH----------HSCGGGTHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-hhhhc----------cCCHHHHHHHHHHH
Confidence            8889999999999999999999999999999999999998 887654322 21111          24799999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 041276          223 CMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++ ..+++|+.+.+|||+..
T Consensus       226 ~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          226 CHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             TST-TCCCCSCEEEEETTEEE
T ss_pred             hCc-hhhcCCCEEEECCCeEE
Confidence            987 45789999999999865

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-37  Score=250.76  Aligned_cols=216  Identities=24%  Similarity=0.337  Sum_probs=187.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee------------EEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKV------------TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~a   84 (251)
                      +|++|||||++|||     .++++.+.+.|.++            .++.+|++|+++++++++++ +.+ +++|++||||
T Consensus         2 ~k~vlVtGasggiG-----~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLG-----RAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARA-QEE-APLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHH-HHH-SCEEEEEECC
T ss_pred             CCEEEEeCCCChHH-----HHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHH-Hhh-CCceEEEEcc
Confidence            68999999999999     88888888776554            35679999999999999999 777 7999999999


Q ss_pred             cCCCCCCCCCC----CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---C---ceEEEecccccccCCCCChhhHHhHH
Q 041276           85 GTNYTTKPTVE----YMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---A---GNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        85 g~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~---g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      |... ..++.+    .+.++|++.+++|+.+++.+++.+.|.|++++   .   ++||++||..+..+.+....|++||+
T Consensus        75 g~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  153 (242)
T 1uay_A           75 GVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKG  153 (242)
T ss_dssp             CCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             cccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHH
Confidence            9875 344444    34569999999999999999999999998764   3   49999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +++.++++++.|++++||+++.|+||++.|++....  .+.....+....|. +++.+|+|+|+.+++|+++  .+++|+
T Consensus       154 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~  229 (242)
T 1uay_A          154 GVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGE  229 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--CCCCCc
Confidence            999999999999999999999999999999987653  23444555666787 8899999999999999986  789999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .+.+|||+.+.
T Consensus       230 ~~~v~gG~~~~  240 (242)
T 1uay_A          230 VVRLDGALRMA  240 (242)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEEcCCeecC
Confidence            99999998764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=8.8e-39  Score=257.87  Aligned_cols=211  Identities=17%  Similarity=0.170  Sum_probs=183.1

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE--------------EEeccCCCHHHHHHHHHHHHHhcC-CCccE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT--------------GSVCDASSRAEREKLMKQVSSLFN-GKLNI   79 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~--------------~~~~D~~~~~~~~~~~~~i~~~~~-~~id~   79 (251)
                      .++|++|||||++|||     .++++.+.+.|.++.              ++.+|++|+++++++++++.+.++ +++|+
T Consensus         5 ~~~k~vlVTGas~gIG-----~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALG-----SRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHH-----HHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            4679999999999999     888888887765543              457899999999999999999883 48999


Q ss_pred             EEEcccCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           80 LINNVGTNYTTKPT-VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        80 lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      ||||||... ..++ .+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||.++..+.++...|++||+|++.
T Consensus        80 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  156 (241)
T 1dhr_A           80 ILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQ  156 (241)
T ss_dssp             EEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHHH
Confidence            999999876 5556 67889999999999999999999999999976  3899999999999999999999999999999


Q ss_pred             HHHHHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          159 LAKNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       159 ~~~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                      |+++++.|++  ++||+||+|+||+++|++.+.....+          +..+..+|+|+|+.+++++++.+.+++|+.+.
T Consensus       157 ~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~  226 (241)
T 1dhr_A          157 LCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQ  226 (241)
T ss_dssp             HHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred             HHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCHHHHHHHHHHHhcCCCcCccceEEE
Confidence            9999999999  89999999999999999754321111          11234579999999999999999999999999


Q ss_pred             eCCCccc
Q 041276          237 VDGGFTV  243 (251)
Q Consensus       237 vdgG~~~  243 (251)
                      +|||..-
T Consensus       227 v~g~~~~  233 (241)
T 1dhr_A          227 VVTTDGK  233 (241)
T ss_dssp             EEEETTE
T ss_pred             EeCCCCc
Confidence            9998763

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-38  Score=256.02  Aligned_cols=215  Identities=15%  Similarity=0.187  Sum_probs=183.6

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee--------------EEEeccCCCHHHHHHHHHHHHHhcC-CCccE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV--------------TGSVCDASSRAEREKLMKQVSSLFN-GKLNI   79 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~--------------~~~~~D~~~~~~~~~~~~~i~~~~~-~~id~   79 (251)
                      +++|++|||||++|||     .++++.+.+.|.++              .++.+|++|+++++++++++.+.++ +++|+
T Consensus         1 m~~k~vlITGas~gIG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALG-----SAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             -CCEEEEEETTTSHHH-----HHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3679999999999999     88888888776544              3457999999999999999999883 48999


Q ss_pred             EEEcccCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           80 LINNVGTNYTTKPT-VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        80 lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      ||||||... ..++ .+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||.++..+.+....|++||++++.
T Consensus        76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  152 (236)
T 1ooe_A           76 VFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  152 (236)
T ss_dssp             EEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHHH
Confidence            999999876 4556 67889999999999999999999999999975  3899999999999999999999999999999


Q ss_pred             HHHHHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHH-HHcCCCCCCccccEE
Q 041276          159 LAKNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA-FLCMPAASYITGQTI  235 (251)
Q Consensus       159 ~~~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~~~~~~~~~G~~i  235 (251)
                      |+++++.|++  ++||+||.|+||+++|++.+.....          .+..+..+|+|+|+.++ +|+++.+.++||+.|
T Consensus       153 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~  222 (236)
T 1ooe_A          153 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALL  222 (236)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHHHHHHHHHHHHcCCCcccccccEE
Confidence            9999999998  8999999999999999975432111          11224567999999998 555888999999999


Q ss_pred             EeCCCccccccc
Q 041276          236 CVDGGFTVNGFF  247 (251)
Q Consensus       236 ~vdgG~~~~~~~  247 (251)
                      .+|||.....++
T Consensus       223 ~v~gg~~~~~~~  234 (236)
T 1ooe_A          223 KITTENGTSTIT  234 (236)
T ss_dssp             EEEEETTEEEEE
T ss_pred             EEecCCCccccC
Confidence            999998765444

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.7e-38  Score=286.86  Aligned_cols=217  Identities=27%  Similarity=0.391  Sum_probs=170.8

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE------------------------------EeccCCC
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG------------------------------SVCDASS   58 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~------------------------------~~~D~~~   58 (251)
                      .....+++||++|||||++|||     .++++.+.+.|.++..                              ..+|+++
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG-----~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d   85 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLG-----REYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS   85 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCC
T ss_pred             cccccCCCCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC
Confidence            3456789999999999999999     4444444444333322                              2379999


Q ss_pred             HHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc
Q 041276           59 RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC  138 (251)
Q Consensus        59 ~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~  138 (251)
                      .++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.+
T Consensus        86 ~~~~~~~~~~~~~~~-g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a  163 (613)
T 3oml_A           86 VIDGAKVIETAIKAF-GRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNS  163 (613)
T ss_dssp             GGGHHHHHC-----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHH
T ss_pred             HHHHHHHHHHHHHHC-CCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence            999999999999999 89999999999986 6778899999999999999999999999999999999889999999999


Q ss_pred             cccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHH
Q 041276          139 GVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSL  218 (251)
Q Consensus       139 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  218 (251)
                      +..+.++...|++||+|+.+|+++++.|++++||+||+|+||.+ |+|....... ..    .      +..+|+|+|+.
T Consensus       164 ~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~-~~----~------~~~~pedvA~~  231 (613)
T 3oml_A          164 GIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD-IL----F------NELKPKLIAPV  231 (613)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH-HH----H------TTCCGGGTHHH
T ss_pred             HcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch-hh----h------hcCCHHHHHHH
Confidence            99999999999999999999999999999999999999999974 6776554332 11    1      23479999999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCccccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      ++||+++. .++||+.|.+|||+....
T Consensus       232 v~~L~s~~-~~~tG~~i~vdGG~~~~~  257 (613)
T 3oml_A          232 VAYLCHES-CEDNGSYIESAAGWATKL  257 (613)
T ss_dssp             HHHTTSTT-CCCCSCEEEEETTEEEEE
T ss_pred             HHHhcCCC-cCCCceEEEECCCeEEEE
Confidence            99999988 899999999999988754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.5e-37  Score=258.49  Aligned_cols=212  Identities=21%  Similarity=0.328  Sum_probs=178.3

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +.++++|+||||||++|||                   +.+.++++.+++...+.++.++.+|++|.++++++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3458999999999999999                   567777888888877788999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.++..+.++...|++
T Consensus       106 ~-g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  183 (301)
T 3tjr_A          106 L-GGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV  183 (301)
T ss_dssp             H-SSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             C-CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHH
Confidence            9 89999999999986 67788999999999999999999999999999999876 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---C-----HHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---D-----EKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ||+|++.|+++++.|++++||+|++|+||+++|++......   .     ......+........+.+|+|+|+.++..+
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l  263 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAI  263 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998643100   0     000000111112234679999999999988


Q ss_pred             CC
Q 041276          224 MP  225 (251)
Q Consensus       224 ~~  225 (251)
                      ..
T Consensus       264 ~~  265 (301)
T 3tjr_A          264 LA  265 (301)
T ss_dssp             HH
T ss_pred             hc
Confidence            53

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2.5e-38  Score=257.33  Aligned_cols=208  Identities=26%  Similarity=0.398  Sum_probs=165.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------VCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      |+||||||++|||     .++++.+.+.|.++...           .+|++++++++++++++   + +++|+||||||.
T Consensus         2 k~vlVTGas~gIG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~---~-~~id~lv~~Ag~   72 (257)
T 1fjh_A            2 SIIVISGCATGIG-----AATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKC---S-KGMDGLVLCAGL   72 (257)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTC---T-TCCSEEEECCCC
T ss_pred             CEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHh---C-CCCCEEEECCCC
Confidence            7899999999999     89999998888776654           36888888888888743   3 689999999997


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc--------------------------
Q 041276           87 NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV--------------------------  140 (251)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~--------------------------  140 (251)
                      ....        +.|++.+++|+.+++.+++.++|+|++++.|+||++||.++.                          
T Consensus        73 ~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (257)
T 1fjh_A           73 GPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             CTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             CCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhh
Confidence            6411        128999999999999999999999998888999999999988                          


Q ss_pred             --cCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh--CCCCCCCCCHHHHH
Q 041276          141 --LSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC--RTPMERPGEPKEVS  216 (251)
Q Consensus       141 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva  216 (251)
                        .+.+....|++||++++.++++++.|++++||+||+|+||+++|++.+...... .......  ..|.+++.+|+|+|
T Consensus       145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dvA  223 (257)
T 1fjh_A          145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP-RYGESIAKFVPPMGRRAEPSEMA  223 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHH
T ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch-hHHHHHHhcccccCCCCCHHHHH
Confidence              344467799999999999999999999999999999999999999976542211 1111112  45778899999999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          217 SLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +.+++|+++.+.+++|+.+.+|||..+
T Consensus       224 ~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          224 SVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999998888999999999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.9e-37  Score=250.96  Aligned_cols=225  Identities=21%  Similarity=0.248  Sum_probs=184.3

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC--FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+.++++|++|||||++|||                   +...++++.+++...+  .++.++.+|++|+++++++++++
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            35568999999999999999                   4455556666666544  46788999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--ceEEEecccccc--cCCCC
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA--GNIILVSSVCGV--LSTNL  145 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--g~iv~vss~~~~--~~~~~  145 (251)
                      .+.+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ++||++||..+.  .+.+.
T Consensus       106 ~~~~-g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (279)
T 1xg5_A          106 RSQH-SGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV  183 (279)
T ss_dssp             HHHH-CCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG
T ss_pred             HHhC-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCC
Confidence            9999 89999999999876 667778899999999999999999999999999998764  899999999988  56667


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHc--cCCeEEEEEecCcccCCCCCCCC-CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          146 GTIYAATKGAMNQLAKNLACEWA--RDNIRINSVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      ...|+++|++++.|+++++.|+.  +.||+++.|+||++.|++..... ..+...   ....+..++.+|+|+|+.++++
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~dvA~~i~~l  260 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA---AATYEQMKCLKPEDVAEAVIYV  260 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH---HHHHC---CBCHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHH---hhhcccccCCCHHHHHHHHHHH
Confidence            78999999999999999999998  88999999999999999843221 122211   1122445678999999999999


Q ss_pred             cCCCCCCccccEEEeCCC
Q 041276          223 CMPAASYITGQTICVDGG  240 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG  240 (251)
                      +++...+.+|+...-++|
T Consensus       261 ~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          261 LSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHSCTTEEEEEEEEEETT
T ss_pred             hcCCcceEeeeEEEccCC
Confidence            998888778865544444

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.5e-38  Score=260.54  Aligned_cols=214  Identities=17%  Similarity=0.154  Sum_probs=167.2

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ..+++++++|+||||||++|||     .++++.+.+.                     +.++.++.+|++|+++++++++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG-----~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   82 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLG-----AVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFAD   82 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHH
T ss_pred             hhhccCCCCCEEEEeCCCChHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHH
Confidence            5668889999999999999999     3444443332                     3467888999999999999988


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----  142 (251)
                      ++     +++|+||||||+..+   ..+.+.++|++.+++|+.+++.++++++|+|++    +||++||.++..+     
T Consensus        83 ~~-----~~iD~lv~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~  150 (291)
T 3rd5_A           83 GV-----SGADVLINNAGIMAV---PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLE  150 (291)
T ss_dssp             TC-----CCEEEEEECCCCCSC---CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSS
T ss_pred             hc-----CCCCEEEECCcCCCC---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcc
Confidence            75     689999999998652   245678889999999999999999999999874    8999999998765     


Q ss_pred             --------CCCChhhHHhHHHHHHHHHHHHHHHccCC--eEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCC-
Q 041276          143 --------TNLGTIYAATKGAMNQLAKNLACEWARDN--IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE-  211 (251)
Q Consensus       143 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  211 (251)
                              .++...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.+....  .. .......+.++... 
T Consensus       151 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~~~~~~  227 (291)
T 3rd5_A          151 DLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR--KL-GDALMSAATRVVATD  227 (291)
T ss_dssp             CTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHH
T ss_pred             cccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch--HH-HHHHHHHHHHHHhCC
Confidence                    34456899999999999999999999887  999999999999999876422  11 12222345555554 


Q ss_pred             HHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          212 PKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+|+|+.+++|+++  .+++|+.+.+|||+...
T Consensus       228 ~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          228 ADFGARQTLYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HHHHHHHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             HHHHHHHHHHHHcC--CCCCCceeCCcccccCc
Confidence            99999999999987  48999999999998754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=254.28  Aligned_cols=220  Identities=21%  Similarity=0.336  Sum_probs=177.4

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +++|++|||||++|||                   +.+.++++.+++.+.  +.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999                   334444555555432  3467889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|+||||||...         .++|++.+++|+.+++.+++.++|+|++++   .|+||++||.++..+.+....|+
T Consensus        85 -g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           85 -GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             -SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             -CCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence             89999999999753         245899999999999999999999998753   58999999999999988999999


Q ss_pred             HhHHHHHHHHHHH--HHHHccCCeEEEEEecCcccCCCCCCCCCCHH------HHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          151 ATKGAMNQLAKNL--ACEWARDNIRINSVAPWFITTPLTEPYLSDEK------FLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       151 ~sK~a~~~~~~~l--a~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      +||++++.+++++  +.|++++||+||+|+||+++|++.......+.      .........+..++.+|+|+|+.+++|
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l  234 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence            9999999999995  68899999999999999999998654321110      111111111223456999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccccc
Q 041276          223 CMPAASYITGQTICVDGGFTVNGF  246 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~~~  246 (251)
                      +++.  .++|+.+.||||..++-.
T Consensus       235 ~s~~--~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          235 IEDD--ALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             HHCT--TCSSCEEEEETTTEEEEC
T ss_pred             hcCc--CCCCcEEEecCCCccccc
Confidence            9865  489999999998765433

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.2e-37  Score=247.00  Aligned_cols=203  Identities=19%  Similarity=0.219  Sum_probs=162.4

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK---------------------CFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      |+||||||++|||     .++++.+.+.                     +.++.++.+|+++.++++++++++.+    .
T Consensus         2 k~vlVTGas~gIG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~----~   72 (230)
T 3guy_A            2 SLIVITGASSGLG-----AELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS----I   72 (230)
T ss_dssp             -CEEEESTTSHHH-----HHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS----C
T ss_pred             CEEEEecCCchHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh----c
Confidence            7899999999999     3333333322                     34567788999999999999987633    3


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ ++||++||..+..+.+....|++||+|+
T Consensus        73 ~d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~  150 (230)
T 3guy_A           73 PSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAV  150 (230)
T ss_dssp             CSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHH
Confidence            599999999876 77788999999999999999999999999999998876 4999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC-CCCCCccccEE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAASYITGQTI  235 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~i  235 (251)
                      +.|+++++.|++++||+||+|+||+++|++.+....          ..+.+++.+|+|+|+.++++++ +...++||+.+
T Consensus       151 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~  220 (230)
T 3guy_A          151 KGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITV  220 (230)
T ss_dssp             HHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceee
Confidence            999999999999999999999999999998765422          2356788899999999999997 67889999999


Q ss_pred             EeCCCc
Q 041276          236 CVDGGF  241 (251)
Q Consensus       236 ~vdgG~  241 (251)
                      ..+..-
T Consensus       221 ~~~~~~  226 (230)
T 3guy_A          221 NREGHH  226 (230)
T ss_dssp             EC----
T ss_pred             cCCCCC
Confidence            987653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.4e-38  Score=265.14  Aligned_cols=225  Identities=12%  Similarity=0.052  Sum_probs=184.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHH--------------------------------HHHHHHHHHhcCCeeEEEeccCCCHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAE--------------------------------LNECLREWKTKCFKVTGSVCDASSRAE   61 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   61 (251)
                      .-.+|++||||||+|||....                                .+.+.+.+.+.+.++..+.+|++++++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            356899999999999991110                                011233445556778889999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCC------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNY------------TTKPT---------------------VEYMAEDLSFLMSTN  108 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n  108 (251)
                      ++++++++.+.| |++|+||||||...            ...++                     .+.++++|++++++|
T Consensus       124 v~~~v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          124 KQLTIDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            999999999999 89999999999741            12344                     678999999999999


Q ss_pred             hHHHH-HHHHHHHHH-HHhCCCceEEEecccccccCCCCC--hhhHHhHHHHHHHHHHHHHHHccC-CeEEEEEecCccc
Q 041276          109 FESAY-HLSQLAHPL-LKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLACEWARD-NIRINSVAPWFIT  183 (251)
Q Consensus       109 ~~~~~-~~~~~~~~~-m~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~-~i~v~~i~pG~v~  183 (251)
                      ..+.+ .+++++.+. |++ ++|+||++||+++..+.+.+  +.|++||+|+.+|+|+||.|++++ |||||+|+||++.
T Consensus       203 ~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~  281 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVV  281 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCC
T ss_pred             chhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCc
Confidence            99998 788887754 544 45999999999999998887  999999999999999999999999 9999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          184 TPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       184 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      |++.......+........  ++++.++|||+++.+.+|+++   ++.|+.+.+|++..++.
T Consensus       282 T~~s~~ip~~p~y~~~l~~--~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~  338 (405)
T 3zu3_A          282 SQASSAIPMMPLYLSLLFK--VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRA  338 (405)
T ss_dssp             CHHHHTSTTHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEEC
T ss_pred             CchhhcCCCCcHHHHHHHH--HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCC
Confidence            9987765443333332222  688899999999999999987   67899999999987764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-36  Score=244.10  Aligned_cols=204  Identities=19%  Similarity=0.222  Sum_probs=172.1

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------CeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------FKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++|+||||||++|||     .++++.+.+.+                       .++.++.+|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG-----~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIG-----LGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHH-----HHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHH-----HHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            3579999999999999     66666666554                       2456788999999999999999999


Q ss_pred             hcCC--CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------C-----CceEEEecccc
Q 041276           72 LFNG--KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS------G-----AGNIILVSSVC  138 (251)
Q Consensus        72 ~~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~-----~g~iv~vss~~  138 (251)
                      .+ +  ++|+||||||...+..++.+.+.+++++.+++|+.+++.++++++|+|+++      +     .++||++||..
T Consensus        76 ~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  154 (250)
T 1yo6_A           76 IV-GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HH-GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             hc-CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCc
Confidence            98 7  899999999987545667788999999999999999999999999999876      5     69999999999


Q ss_pred             cccCC-------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCC
Q 041276          139 GVLST-------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGE  211 (251)
Q Consensus       139 ~~~~~-------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (251)
                      +..+.       ++...|++||++++.++++++.|++++||+++.|+||+++|++.+.                 ..+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~  217 (250)
T 1yo6_A          155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALT  217 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCC
Confidence            98776       5678999999999999999999999999999999999999998642                 12458


Q ss_pred             HHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          212 PKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      |+|+|+.+++++++...+++|+.+.+|||.
T Consensus       218 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          218 VEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             -HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            999999999999988888999999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.2e-36  Score=248.18  Aligned_cols=216  Identities=22%  Similarity=0.269  Sum_probs=176.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------CeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC---------------------FKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+.+|+||||||++|||     .++++.+.+.|                     .++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~~k~vlVTGas~gIG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFG-----RAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             --CCCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            35789999999999999     45555544433                     35677889999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|++|
T Consensus        77 ~-g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (281)
T 3m1a_A           77 Y-GRVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSAT  154 (281)
T ss_dssp             H-SCCSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             C-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHH
Confidence            9 89999999999875 667788999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-----CHH------HHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-----DEK------FLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      |++++.++++++.|++++||+|+.|+||+++|++......     .+.      .........+.+++.+|+|+|+++++
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~  234 (281)
T 3m1a_A          155 KAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRL  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999998654211     111      11233445677888999999999999


Q ss_pred             HcCCCCCCccccEEEeCC
Q 041276          222 LCMPAASYITGQTICVDG  239 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdg  239 (251)
                      +++...   .|..+.+.+
T Consensus       235 ~~~~~~---~~~~~~l~s  249 (281)
T 3m1a_A          235 ALDTEK---TPLRLALGG  249 (281)
T ss_dssp             HHHSSS---CCSEEEESH
T ss_pred             HHhCCC---CCeEEecCc
Confidence            997553   244444443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6e-36  Score=250.71  Aligned_cols=213  Identities=22%  Similarity=0.295  Sum_probs=171.8

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +.++++|+||||||++|||                   +.++++++.+.+...+.  ++.++.+|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568899999999999999                   55667777777766554  78999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCceEEEecccccccCCC
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS------GAGNIILVSSVCGVLSTN  144 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~~g~iv~vss~~~~~~~~  144 (251)
                      +.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|+|+++      +.|+||++||.++..+.+
T Consensus        83 ~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           83 ARF-GPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HHT-CCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             HhC-CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            999 89999999999876 6788899999999999999999999999999999875      569999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHH---------HhhCCCCC-CCCCHHH
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE---------VKCRTPME-RPGEPKE  214 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~d  214 (251)
                      ....|++||+|+++|+++++.|+.++||+|++|+||+++|++.............         .....+.. ...+|++
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~  240 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV  240 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHH
Confidence            9999999999999999999999999999999999999999987653222111100         00000111 1258999


Q ss_pred             HHHHHHHHcCCC
Q 041276          215 VSSLVAFLCMPA  226 (251)
Q Consensus       215 va~~~~~l~~~~  226 (251)
                      +|+.++..+...
T Consensus       241 vA~~~~~al~~~  252 (319)
T 3ioy_A          241 IGARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcC
Confidence            999999988543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=6.8e-36  Score=239.78  Aligned_cols=205  Identities=22%  Similarity=0.298  Sum_probs=167.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .+|++|||||++|||     .++++.+.+.|.                    ++.++.+|++|.++++++++++.+.+ +
T Consensus         4 ~~k~vlVtGasggiG-----~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIG-----EATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAF-G   77 (234)
T ss_dssp             CCCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            468999999999999     333333333221                    46678899999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++
T Consensus        78 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (234)
T 2ehd_A           78 ELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFG  156 (234)
T ss_dssp             CCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHH
Confidence            9999999999875 667788999999999999999999999999999998888999999999999998889999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      ++.++++++.|++++||+++.|+||+++|++.....  +.    +       .+.+|+|+|+.+++++++.+.+++|+.+
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~----~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~  223 (234)
T 2ehd_A          157 LLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP--GQ----A-------WKLKPEDVAQAVLFALEMPGHAMVSEIE  223 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEE
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--cc----c-------CCCCHHHHHHHHHHHhCCCcccccceEE
Confidence            999999999999999999999999999999865321  10    1       1358999999999999999999999977


Q ss_pred             EeCCC
Q 041276          236 CVDGG  240 (251)
Q Consensus       236 ~vdgG  240 (251)
                      ..+++
T Consensus       224 ~~~~~  228 (234)
T 2ehd_A          224 LRPTR  228 (234)
T ss_dssp             CCC--
T ss_pred             EeecC
Confidence            66554

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.6e-37  Score=264.42  Aligned_cols=228  Identities=14%  Similarity=0.093  Sum_probs=181.9

Q ss_pred             CCCEEEEecCCCCcCcHHH--------------------------------HHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAE--------------------------------LNECLREWKTKCFKVTGSVCDASSRAERE   63 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   63 (251)
                      .+|++||||||+|||....                                ...+.+.+.+.+.++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            5899999999999991111                                01123445556777889999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCC------------CCCCCC---------------------CCCCHHHHHHHHHhhhH
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTN------------YTTKPT---------------------VEYMAEDLSFLMSTNFE  110 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n~~  110 (251)
                      ++++++.+.++|++|+||||||..            ....++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            999999999845899999999972            112333                     36799999999999999


Q ss_pred             HHH-HHHHHHHHHHHhCCCceEEEecccccccCCCCC--hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC
Q 041276          111 SAY-HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT  187 (251)
Q Consensus       111 ~~~-~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~  187 (251)
                      +.+ .+++.+.+.+...++|+||++||+++..+.+.+  ..|++||+|+.+|+++|+.|++++|||||+|+||++.|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            987 788887765433345899999999999888766  89999999999999999999999999999999999999998


Q ss_pred             CCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc-ccEEEeCCCcccccc
Q 041276          188 EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT-GQTICVDGGFTVNGF  246 (251)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~-G~~i~vdgG~~~~~~  246 (251)
                      ......+......  ..|+++.++|||+|+.+.+|+++.- |.+ |+...+|++..++.-
T Consensus       300 ~~ip~~~~~~~~~--~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d  356 (422)
T 3s8m_A          300 AAIPVMPLYISMV--YKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLD  356 (422)
T ss_dssp             GGSTHHHHHHHHH--HHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESC
T ss_pred             hcCCCChHHHHHH--HhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccc
Confidence            7654333322222  1278899999999999999998754 554 777779998887643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.2e-37  Score=247.84  Aligned_cols=210  Identities=20%  Similarity=0.233  Sum_probs=172.5

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-------------------------CCeeEEEeccCCCH-HHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK-------------------------CFKVTGSVCDASSR-AEREKLMK   67 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-------------------------~~~~~~~~~D~~~~-~~~~~~~~   67 (251)
                      ++++|++|||||++|||     .++++.+.+.                         +.++.++.+|++|+ ++++++++
T Consensus         2 ~l~~k~vlVtGas~gIG-----~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIG-----LDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLK   76 (254)
T ss_dssp             CCTTCEEEEETTTSHHH-----HHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHH-----HHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHH
Confidence            57899999999999999     3333332222                         33577889999998 99999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTN  144 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~  144 (251)
                      ++.+.+ +++|+||||||...         .++|++.+++|+.+++.+++.++|+|++++   .|+||++||.++..+.+
T Consensus        77 ~~~~~~-g~id~lv~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  146 (254)
T 1sby_A           77 KIFDQL-KTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH  146 (254)
T ss_dssp             HHHHHH-SCCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT
T ss_pred             HHHHhc-CCCCEEEECCccCC---------HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC
Confidence            999999 89999999999742         356899999999999999999999998764   58999999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---CHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---DEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      ....|++||++++.|+++++.++.++||+|++|+||+++|++.+....   ............|   ..+|+|+|+.+++
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~  223 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVK  223 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHH
Confidence            999999999999999999999998889999999999999998654321   0111222333333   3489999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++   .+.+|+.+.+|||....
T Consensus       224 ~~~---~~~~G~~~~v~gG~~~~  243 (254)
T 1sby_A          224 AIE---ANKNGAIWKLDLGTLEA  243 (254)
T ss_dssp             HHH---HCCTTCEEEEETTEEEE
T ss_pred             HHH---cCCCCCEEEEeCCceeE
Confidence            995   56899999999997543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.9e-36  Score=251.54  Aligned_cols=222  Identities=19%  Similarity=0.222  Sum_probs=169.7

Q ss_pred             CCCCCEEEEecCCCCcC------------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG------------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        14 ~l~~k~vlItGas~giG------------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+++|++|||||++|||                        +.+.++++.+.+...+.++.++.+|++|+++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            46789999999999999                        234455555555555667889999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-CCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-TNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-~~~~~~  148 (251)
                      .+++ +++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++... .+....
T Consensus        82 ~~~~-g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           82 IGED-GRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHH-SCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHc-CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence            9999 89999999999876 77888999999999999999999999999999999988899999999999854 466789


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----CCCHHHHHHHhh------------C--CCCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----LSDEKFLEEVKC------------R--TPMERPG  210 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~------------~--~~~~~~~  210 (251)
                      |++||+|+++|+++++.|++++||+|++|+||++.|++....    .........+..            .  .......
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA  239 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999999999999998764321    111111111110            0  0111235


Q ss_pred             CHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          211 EPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      +|+++|++++.++..... .....+.+.
T Consensus       240 ~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          240 DVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             CTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             CHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            788999999888865421 234555554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-35  Score=240.79  Aligned_cols=210  Identities=20%  Similarity=0.204  Sum_probs=178.7

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------------CeeEEEeccCCCHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------------FKVTGSVCDASSRAER   62 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~D~~~~~~~   62 (251)
                      .....++++|+||||||++|||     .++++.+.+.+                          .++.++.+|+++.+++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG-----~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v   87 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLG-----LGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY   87 (267)
T ss_dssp             -------CCSEEEESCCSSHHH-----HHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGH
T ss_pred             cccccCCCCCEEEEECCCCcHH-----HHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHH
Confidence            4456678999999999999999     55555554433                          3567788999999999


Q ss_pred             HHHHHHHHHhcCC--CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------C-----Cc
Q 041276           63 EKLMKQVSSLFNG--KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS------G-----AG  129 (251)
Q Consensus        63 ~~~~~~i~~~~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~-----~g  129 (251)
                      +++++++.+.+ +  ++|+||||||......++.+.+.+++++.+++|+.+++.+++.++|+|+++      +     .+
T Consensus        88 ~~~~~~~~~~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  166 (267)
T 1sny_A           88 DKLVADIEGVT-KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRA  166 (267)
T ss_dssp             HHHHHHHHHHH-GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTC
T ss_pred             HHHHHHHHHhc-CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCc
Confidence            99999999998 6  799999999987545667788999999999999999999999999999876      3     58


Q ss_pred             eEEEecccccccCCC---CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC
Q 041276          130 NIILVSSVCGVLSTN---LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM  206 (251)
Q Consensus       130 ~iv~vss~~~~~~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  206 (251)
                      +||++||..+..+.+   ....|++||++++.|+++++.|++++||+++.|+||+++|+|....                
T Consensus       167 ~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------------  230 (267)
T 1sny_A          167 AIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS----------------  230 (267)
T ss_dssp             EEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT----------------
T ss_pred             eEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC----------------
Confidence            999999999987753   6778999999999999999999999999999999999999987431                


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       207 ~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                       ...+|+++|+.+++++.......+|+.+.+|||.
T Consensus       231 -~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          231 -APLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             -CSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             -CCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence             2468999999999999988888999999999986

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-35  Score=240.95  Aligned_cols=203  Identities=25%  Similarity=0.328  Sum_probs=176.7

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.+++++|++|||||++|||                   +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            35678999999999999999                   44556666667766667889999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++
T Consensus       105 ~~-g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  182 (272)
T 1yb1_A          105 EI-GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  182 (272)
T ss_dssp             HT-CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             HC-CCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHH
Confidence            99 89999999999876 56677888999999999999999999999999999888899999999999988888889999


Q ss_pred             hHHHHHHHHHHHHHHHc---cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          152 TKGAMNQLAKNLACEWA---RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~---~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      ||++++.++++++.|+.   ++||+|+.|+||+++|++.+.   ..         .+..++.+|+|+|+.+++++....
T Consensus       183 sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~~---------~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          183 SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS---------TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH---------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---cc---------ccccCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999997   679999999999999998642   10         123467899999999999996543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.5e-35  Score=248.96  Aligned_cols=211  Identities=17%  Similarity=0.252  Sum_probs=165.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhc------------------------------CCeeEEEeccCCCHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTK------------------------------CFKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~------------------------------~~~~~~~~~D~~~~~~~~~~   65 (251)
                      ++|+||||||++|||     .++++.+.+.                              +.++.++.+|++|.++++++
T Consensus         1 ~~k~vlVTGas~GIG-----~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   75 (327)
T 1jtv_A            1 ARTVVLITGCSSGIG-----LHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA   75 (327)
T ss_dssp             CCEEEEESCCSSHHH-----HHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHH
Confidence            479999999999999     2222222211                              24678899999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL  145 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  145 (251)
                      ++++.  + +++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+.
T Consensus        76 ~~~~~--~-g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~  151 (327)
T 1jtv_A           76 RERVT--E-GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF  151 (327)
T ss_dssp             HHTCT--T-SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT
T ss_pred             HHHHh--c-CCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC
Confidence            99883  4 79999999999875 66778899999999999999999999999999999887899999999999999989


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH---------HHHH---HHhh--CCCCCCC-C
Q 041276          146 GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE---------KFLE---EVKC--RTPMERP-G  210 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~---------~~~~---~~~~--~~~~~~~-~  210 (251)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|+|........         ....   .+..  ..+.++. .
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQ  231 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCC
Confidence            9999999999999999999999999999999999999999976543321         1111   1100  0112233 4


Q ss_pred             CHHHHHHHHHHHcCC---CCCCccccEE
Q 041276          211 EPKEVSSLVAFLCMP---AASYITGQTI  235 (251)
Q Consensus       211 ~~~dva~~~~~l~~~---~~~~~~G~~i  235 (251)
                      +|+|+|+.++++++.   ..++++|+.+
T Consensus       232 ~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          232 NPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             CHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence            899999999999864   3567788654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6.8e-36  Score=256.33  Aligned_cols=226  Identities=12%  Similarity=0.026  Sum_probs=183.1

Q ss_pred             CCCCEEEEecCCCCcCcH--HH-------------------------------HHHHHHHHHhcCCeeEEEeccCCCHHH
Q 041276           15 LQGMTALVTGGTKGLGNE--AE-------------------------------LNECLREWKTKCFKVTGSVCDASSRAE   61 (251)
Q Consensus        15 l~~k~vlItGas~giG~~--~~-------------------------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   61 (251)
                      ..+|+|||||||+|||.+  ..                               .+.+.+.+.+.+.++.++.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            689999999999999922  00                               123333444556778899999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCC------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNY------------TTKPT---------------------VEYMAEDLSFLMSTN  108 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n  108 (251)
                      ++++++++.+.+ +++|+||||||...            ...++                     .+.+.++|++.+++|
T Consensus       138 v~~~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          138 KDKVIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            999999999999 89999999999741            12233                     356999999999999


Q ss_pred             hHHHH-HHHHHHHHHHHhCCCceEEEecccccccCCCCC--hhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccC
Q 041276          109 FESAY-HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITT  184 (251)
Q Consensus       109 ~~~~~-~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t  184 (251)
                      ..+.+ .+++.+.+.+...++|+||++||+++..+.+.+  +.|++||+|+.+|+++|+.|+++ +|||||+|+||++.|
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T  296 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT  296 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence            99888 777877765544456899999999999999888  99999999999999999999999 999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          185 PLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      ++.......+........  ++++.++||++++.+.+|+++  .+.+|+.|.+|+|..++.
T Consensus       297 ~~s~~ip~~p~y~~~~~~--~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~  353 (418)
T 4eue_A          297 KASAYIPTFPLYAAILYK--VMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRM  353 (418)
T ss_dssp             HHHHTSTTHHHHHHHHHH--HHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEES
T ss_pred             hhhhcCCCCcHHHHHHHH--HHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeC
Confidence            988766443332222222  466778999999999999976  567899999999876653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.4e-35  Score=239.69  Aligned_cols=205  Identities=24%  Similarity=0.256  Sum_probs=139.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++++|++|||||++|||     .++++.+.+ +.                   ++.++.+|+++.++ .+.+.++.+.+ 
T Consensus         2 ~l~~k~vlITGas~gIG-----~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~-   73 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMG-----IEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVL-EEGGVDKLKNL-   73 (245)
T ss_dssp             ----CEEEEESTTSHHH-----HHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHH-TSSSCGGGTTC-
T ss_pred             CCCCCEEEEEcCCCHHH-----HHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHH-HHHHHHHHHhc-
Confidence            57899999999999999     555555543 22                   35566778877766 44444445566 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||.++..+.+....|++||+
T Consensus        74 ~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           74 DHVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             SCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred             CCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence            79999999999876 66777889999999999999999999999999998876 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |++.|+++++.|++++||+||+|+||+++|++.+......      ....+..++.+|+|+|+.+++|++...   +++.
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~dvA~~i~~l~~~~~---~~~~  222 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPKEIANAIRFVIDAGE---TTQI  222 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT---TEEE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHHHHHHHHHHHHcCCC---ccce
Confidence            9999999999999999999999999999999986653321      123456677899999999999997554   3444


Q ss_pred             EEe
Q 041276          235 ICV  237 (251)
Q Consensus       235 i~v  237 (251)
                      ..+
T Consensus       223 ~~i  225 (245)
T 3e9n_A          223 TNV  225 (245)
T ss_dssp             EEE
T ss_pred             eee
Confidence            443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-34  Score=237.27  Aligned_cols=204  Identities=24%  Similarity=0.295  Sum_probs=168.8

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC-CeeEEEeccCCCH-HHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSVCDASSR-AEREKLMKQVS   70 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~i~   70 (251)
                      +..+++|+||||||++|||                   +.+++++..+++.+.+ .++.++.+|++++ ++++++++.+.
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence            3457899999999999999                   5566667777776654 4788999999998 99999999999


Q ss_pred             HhcCCCccEEEEcccCCCC-----------------------------CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHH
Q 041276           71 SLFNGKLNILINNVGTNYT-----------------------------TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHP  121 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (251)
                      +.+ +++|+||||||+...                             ..++.+.+.+.+++.+++|+.+++.+++.++|
T Consensus        87 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           87 THF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHH-SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HhC-CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            999 899999999998641                             12445678999999999999999999999999


Q ss_pred             HHHhCCCceEEEecccccccCC-------------------------------------------CCChhhHHhHHHHHH
Q 041276          122 LLKASGAGNIILVSSVCGVLST-------------------------------------------NLGTIYAATKGAMNQ  158 (251)
Q Consensus       122 ~m~~~~~g~iv~vss~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~  158 (251)
                      +|++++.|+||++||.++..+.                                           +....|++||+|++.
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            9998888999999999887653                                           355789999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      |+++++.|+.+  |+||+|+||+++|+|.+...                 ..++++.|+.+++++.......+|..+
T Consensus       246 ~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          246 YTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG-----------------NYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC-----------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHhhcCC--ceEEEecCCceecCCcCCCC-----------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            99999999864  99999999999999876431                 137999999999998755555555544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=2.6e-33  Score=229.48  Aligned_cols=203  Identities=23%  Similarity=0.305  Sum_probs=167.0

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .++|+||||||++|||                    +.+.+++..+++...+.++.++.+|+++.++++++++++.+.+ 
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            3579999999999999                    2233444444554445567889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCC-HHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----------
Q 041276           75 GKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----------  143 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----------  143 (251)
                      +++|+||||||... ... .+.+ .+++++.+++|+.+++.+++.++|+|++.  |+||++||..+..+.          
T Consensus        81 g~id~li~~Ag~~~-~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           81 GGLDVLVNNAGIAF-KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SSEEEEEECCCCCC-CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCCEEEECCcccc-cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--CEEEEECChhhhcccccCChhHHhh
Confidence            89999999999865 332 2334 58999999999999999999999998763  899999998776320          


Q ss_pred             -------------------------------CCChhhHHhHHHHHHHHHHHHHHHcc----CCeEEEEEecCcccCCCCC
Q 041276          144 -------------------------------NLGTIYAATKGAMNQLAKNLACEWAR----DNIRINSVAPWFITTPLTE  188 (251)
Q Consensus       144 -------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~pG~v~t~~~~  188 (251)
                                                     .+...|++||++++.|++.++.++.+    +||+|++|+||++.|++.+
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                           12378999999999999999999987    7999999999999999865


Q ss_pred             CCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC--CCCccccEEEeCCC
Q 041276          189 PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA--ASYITGQTICVDGG  240 (251)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~--~~~~~G~~i~vdgG  240 (251)
                      .                 .++.+|+|+|+.+++|++..  ..+++|+.|. +++
T Consensus       237 ~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P-----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T-----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c-----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            3                 13568999999999999844  4689999987 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=2.8e-32  Score=225.17  Aligned_cols=200  Identities=23%  Similarity=0.238  Sum_probs=166.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ...+++|+||||||++|||                   +.+.++++.+++.+.+. ++.++.+|++|.++++++++++.+
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999                   44556666666655443 788999999999999999999999


Q ss_pred             hcCCCccEEEEc-ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           72 LFNGKLNILINN-VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        72 ~~~~~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      .+ +++|+|||| +|...  .+..+.+.+++++.+++|+.+++.++++++|.|++++ |+||++||.++..+.++...|+
T Consensus       103 ~~-g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~  178 (286)
T 1xu9_A          103 LM-GGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYS  178 (286)
T ss_dssp             HH-TSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCTTCHHHH
T ss_pred             Hc-CCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccccCCCCccHHH
Confidence            99 899999999 56543  3445678999999999999999999999999998654 8999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHH--ccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          151 ATKGAMNQLAKNLACEW--ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~--~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +||++++.++++++.|+  ...||+++.|+||+++|++........          ......+|+|+|+.++..+..
T Consensus       179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------ccCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999  578999999999999998753211110          112346899999999988854

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.1e-33  Score=273.77  Aligned_cols=223  Identities=16%  Similarity=0.156  Sum_probs=181.5

Q ss_pred             ccCCCCCEEEEecCCCC-cC--------------------cHHHHHHHHHHHH----hcCCeeEEEeccCCCHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKG-LG--------------------NEAELNECLREWK----TKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        12 ~~~l~~k~vlItGas~g-iG--------------------~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      .+++++|++|||||++| ||                    +...++++.+++.    ..+.++.++.+|++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            44689999999999998 99                    2344444444443    23568899999999999999999


Q ss_pred             HHHHHh-----cCC-CccEEEEcccCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHHH--HHHHHhCCCceEEEec
Q 041276           67 KQVSSL-----FNG-KLNILINNVGTNYTTK-PTVEYM--AEDLSFLMSTNFESAYHLSQLA--HPLLKASGAGNIILVS  135 (251)
Q Consensus        67 ~~i~~~-----~~~-~id~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~m~~~~~g~iv~vs  135 (251)
                      +++.+.     + | ++|+||||||+.. .. ++.+.+  .++|+++|++|+.+++.+++.+  +|.|++++.|+||++|
T Consensus       750 ~~i~~~~~~~G~-G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          750 EFIYDTEKNGGL-GWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHHSCTTTTSC-CCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHHhcccccc-CCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            999988     6 5 8999999999876 55 778888  8999999999999999999988  7888877778999999


Q ss_pred             ccccccCCCCChhhHHhHHHHHHH-HHHHHHHHccCCeEEEEEecCccc-CCCCCCCCCCHHHHHHHhhCCCCCCCCCHH
Q 041276          136 SVCGVLSTNLGTIYAATKGAMNQL-AKNLACEWARDNIRINSVAPWFIT-TPLTEPYLSDEKFLEEVKCRTPMERPGEPK  213 (251)
Q Consensus       136 s~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~~i~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (251)
                      |.++..+  +...|++||+|+.+| ++.++.+++++ |+||+|+||+++ |+|........    ......|. +..+|+
T Consensus       828 S~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~~pl-r~~sPE  899 (1887)
T 2uv8_A          828 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIA----EGIEKMGV-RTFSQK  899 (1887)
T ss_dssp             SCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCTTH----HHHHTTSC-CCEEHH
T ss_pred             ChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchhHH----HHHHhcCC-CCCCHH
Confidence            9999887  577899999999999 99999999887 999999999999 88865311111    22234454 566999


Q ss_pred             HHHHHHHHHcCCC-CCCccccEEEe--CCCcccc
Q 041276          214 EVSSLVAFLCMPA-ASYITGQTICV--DGGFTVN  244 (251)
Q Consensus       214 dva~~~~~l~~~~-~~~~~G~~i~v--dgG~~~~  244 (251)
                      |+|+.+++|+++. +.++||+.|.+  |||+.+.
T Consensus       900 EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          900 EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            9999999999987 78999999987  5998654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1e-32  Score=223.55  Aligned_cols=209  Identities=25%  Similarity=0.374  Sum_probs=172.4

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------VCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      |+||||||+||||     .++++.+.+.|.++..+           .+|++++++++++++++   . +++|+||||||.
T Consensus         2 k~vlVtGasg~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~---~-~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIG-----AALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRC---G-GVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHH---T-TCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHH-----HHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHc---C-CCccEEEECCCC
Confidence            6899999999999     88999998888777654           36888888888888754   3 689999999997


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------------------
Q 041276           87 NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------------------  143 (251)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------------------  143 (251)
                      ....        +.++..+++|+.+++.+++.+.+.|++.+.++||++||..+..+.                       
T Consensus        73 ~~~~--------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (255)
T 2dkn_A           73 GVTA--------ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE  144 (255)
T ss_dssp             CTTS--------SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred             CCcc--------hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence            5411        237899999999999999999999998877999999999888654                       


Q ss_pred             ---CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCC--CCCCCCCHHHHHHH
Q 041276          144 ---NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT--PMERPGEPKEVSSL  218 (251)
Q Consensus       144 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~  218 (251)
                         ++...|+.||++++.+++.++.++.++|++++.++||++.|++......... ........  +.+++.+++|+|++
T Consensus       145 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~  223 (255)
T 2dkn_A          145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR-YGESTRRFVAPLGRGSEPREVAEA  223 (255)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT-THHHHHSCCCTTSSCBCHHHHHHH
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh-hHHHHHHHHHHhcCCCCHHHHHHH
Confidence               4567899999999999999999999999999999999999987643211100 11112222  67788999999999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCcccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +++++++.+.+++|+.+.++||..+.
T Consensus       224 ~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          224 IAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHhCCCcccceeeEEEecCCeEee
Confidence            99999887778999999999997654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.7e-32  Score=213.93  Aligned_cols=191  Identities=21%  Similarity=0.240  Sum_probs=167.4

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE-------EeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTG-------SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~-------~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      ++|||||++|||     .++++.+. .|.++..       +.+|++++++++++++++     +++|+||||||... ..
T Consensus         5 ~vlVtGasg~iG-----~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~-----~~~d~vi~~ag~~~-~~   72 (202)
T 3d7l_A            5 KILLIGASGTLG-----SAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQV-----GKVDAIVSATGSAT-FS   72 (202)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHH-----CCEEEEEECCCCCC-CC
T ss_pred             EEEEEcCCcHHH-----HHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHh-----CCCCEEEECCCCCC-CC
Confidence            799999999999     89999998 8877765       478999999999998765     68999999999875 66


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCC
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN  171 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  171 (251)
                      ++.+.+.++|++.+++|+.+++.+++.+.+.|++.  ++||++||..+..+.+....|+++|++++.+++.++.|+ ++|
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~g  149 (202)
T 3d7l_A           73 PLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRG  149 (202)
T ss_dssp             CGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STT
T ss_pred             ChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCC
Confidence            77888999999999999999999999999988653  899999999999998899999999999999999999998 789


Q ss_pred             eEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       172 i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      |+++.++||++.|++..           .....+..++.+|+|+|+.+++++   ..+.+|+.+.+|
T Consensus       150 i~v~~v~pg~v~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~---~~~~~G~~~~vd  202 (202)
T 3d7l_A          150 IRINTVSPNVLEESWDK-----------LEPFFEGFLPVPAAKVARAFEKSV---FGAQTGESYQVY  202 (202)
T ss_dssp             CEEEEEEECCBGGGHHH-----------HGGGSTTCCCBCHHHHHHHHHHHH---HSCCCSCEEEEC
T ss_pred             eEEEEEecCccCCchhh-----------hhhhccccCCCCHHHHHHHHHHhh---hccccCceEecC
Confidence            99999999999998632           122345567789999999998888   356899999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.8e-32  Score=264.80  Aligned_cols=223  Identities=17%  Similarity=0.195  Sum_probs=182.0

Q ss_pred             ccCCCCCEEEEecCCCC-cC--------------------cHHHHHHHHHHH----HhcCCeeEEEeccCCCHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKG-LG--------------------NEAELNECLREW----KTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        12 ~~~l~~k~vlItGas~g-iG--------------------~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      .+++++|+||||||++| ||                    +...+.+..+++    ...+.++.++.+|++|.+++++++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34689999999999999 99                    223444444333    333668999999999999999999


Q ss_pred             HHHHHh---cCC-CccEEEEcccCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHH--HHHHHHhCCCceEEEeccc
Q 041276           67 KQVSSL---FNG-KLNILINNVGTNYTTK-PTVEYM--AEDLSFLMSTNFESAYHLSQL--AHPLLKASGAGNIILVSSV  137 (251)
Q Consensus        67 ~~i~~~---~~~-~id~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~m~~~~~g~iv~vss~  137 (251)
                      +++.+.   + | ++|+||||||+.. .. ++.+.+  .++|+++|++|+.+++.+++.  +++.|++++.|+||++||.
T Consensus       727 ~~i~~~~~~~-G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          727 NYIYDTKNGL-GWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHHCSSSSC-CCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHHhhccc-CCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence            999998   8 7 8999999999876 44 778888  899999999999999999987  7788887777899999999


Q ss_pred             ccccCCCCChhhHHhHHHHHHHHHHHHH-HHccCCeEEEEEecCccc-CCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHH
Q 041276          138 CGVLSTNLGTIYAATKGAMNQLAKNLAC-EWARDNIRINSVAPWFIT-TPLTEPYLSDEKFLEEVKCRTPMERPGEPKEV  215 (251)
Q Consensus       138 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~~i~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  215 (251)
                      ++..+  +...|++||+|+.+|++.++. +++++ |+||+|+||+++ |+|...    .+.......+.+. +..+|+|+
T Consensus       805 ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r~~sPeEV  876 (1878)
T 2uv9_A          805 HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-RTFSQQEM  876 (1878)
T ss_dssp             SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-CCBCHHHH
T ss_pred             hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-CCCCHHHH
Confidence            99887  467899999999999987665 47766 999999999999 998643    1222223334554 45699999


Q ss_pred             HHHHHHHcCCCC-CCccccEEEe--CCCcccc
Q 041276          216 SSLVAFLCMPAA-SYITGQTICV--DGGFTVN  244 (251)
Q Consensus       216 a~~~~~l~~~~~-~~~~G~~i~v--dgG~~~~  244 (251)
                      |+.+++|+++.+ .++||+.|.+  |||+...
T Consensus       877 A~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          877 AFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            999999999887 8999999986  5998754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-34  Score=269.27  Aligned_cols=224  Identities=17%  Similarity=0.175  Sum_probs=180.8

Q ss_pred             cccCCCCCEEEEecCCCC-cC--------------------cHHHHHHHHHHHHh----cCCeeEEEeccCCCHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKG-LG--------------------NEAELNECLREWKT----KCFKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~g-iG--------------------~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   65 (251)
                      ..+++++|+||||||++| ||                    +.+.++++.+++.+    .+.++.++.+|++|.++++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            445689999999999998 99                    11222233333321    145788899999999999999


Q ss_pred             HHHHHHh-----cCC-CccEEEEcccCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHHH--HHHHHhCCCceEEEe
Q 041276           66 MKQVSSL-----FNG-KLNILINNVGTNYTTK-PTVEYM--AEDLSFLMSTNFESAYHLSQLA--HPLLKASGAGNIILV  134 (251)
Q Consensus        66 ~~~i~~~-----~~~-~id~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~m~~~~~g~iv~v  134 (251)
                      ++++.+.     + + ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||++
T Consensus       550 Ve~I~e~~~~~Gf-G~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnI  627 (1688)
T 2pff_A          550 IEFIYDTEKNGGL-GWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  627 (1688)
T ss_dssp             HHHHHSCTTSSSC-CCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCC
T ss_pred             HHHHHHhcccccc-CCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEE
Confidence            9999988     7 6 8999999999876 45 677887  9999999999999999999998  888988777899999


Q ss_pred             cccccccCCCCChhhHHhHHHHHHH-HHHHHHHHccCCeEEEEEecCccc-CCCCCCCCCCHHHHHHHhhCCCCCCCCCH
Q 041276          135 SSVCGVLSTNLGTIYAATKGAMNQL-AKNLACEWARDNIRINSVAPWFIT-TPLTEPYLSDEKFLEEVKCRTPMERPGEP  212 (251)
Q Consensus       135 ss~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~~i~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (251)
                      ||.++..+  +...|++||+|+.+| .+.++.++++. |+||+|+||+++ |+|.....    .........|. +..+|
T Consensus       628 SSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e----~~~~~l~~ipl-R~~sP  699 (1688)
T 2pff_A          628 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN----IIAEGIEKMGV-RTFSQ  699 (1688)
T ss_dssp             CSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTT----TCSTTTSSSSC-CCCCC
T ss_pred             EChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCch----HHHHHHHhCCC-CCCCH
Confidence            99999887  577899999999999 88888888877 999999999999 78764310    01111223444 45699


Q ss_pred             HHHHHHHHHHcCCC-CCCccccEEEeC--CCcccc
Q 041276          213 KEVSSLVAFLCMPA-ASYITGQTICVD--GGFTVN  244 (251)
Q Consensus       213 ~dva~~~~~l~~~~-~~~~~G~~i~vd--gG~~~~  244 (251)
                      +|+|+.+++|+++. +.+++|+.|.+|  ||+...
T Consensus       700 EEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          700 KEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            99999999999988 689999999875  997653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=9.3e-30  Score=200.08  Aligned_cols=182  Identities=20%  Similarity=0.232  Sum_probs=149.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------------EEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------------TGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |++|||||++|||     .++++.+.+.  ++                   .++.+|++|++++++++++    + +++|
T Consensus         1 k~vlVtGasg~iG-----~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~-~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLG-----GAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE----A-GPLD   68 (207)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred             CEEEEEcCCcHHH-----HHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence            6899999999999     3333333222  11                   6778999999999999987    5 7999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      +||||||... ..++.+.+.++|++.+++|+.+++.+++++    ++++.++||++||..+..+.++...|+++|++++.
T Consensus        69 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  143 (207)
T 2yut_A           69 LLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEA  143 (207)
T ss_dssp             EEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHH
T ss_pred             EEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHH
Confidence            9999999875 667778889999999999999999999988    44456899999999999999899999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +++.++.|++++||+++.++||++.|++...            ...+..++.+|+|+|+.+++++.....
T Consensus       144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          144 YLEAARKELLREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHhhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987422            123556788999999999999975543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=1.2e-28  Score=218.39  Aligned_cols=200  Identities=21%  Similarity=0.163  Sum_probs=165.2

Q ss_pred             CCCCEEEEecCCCCcC-----------------c-----------------HHHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           15 LQGMTALVTGGTKGLG-----------------N-----------------EAELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        15 l~~k~vlItGas~giG-----------------~-----------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      -.+|++|||||++|||                 .                 ...++++.+++.+.+.++.++.+|++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            4689999999999999                 1                 34456677777777888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccccc
Q 041276           61 EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCG  139 (251)
Q Consensus        61 ~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~  139 (251)
                      +++++++++. .+ +++|+||||||+.. ...+.+.+.++|++++++|+.+++++.+.+.+.|++++ .++||++||+++
T Consensus       329 ~v~~~~~~i~-~~-g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          329 AAARLLAGVS-DA-HPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHTSC-TT-SCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHH-hc-CCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            9999999998 67 89999999999987 67888999999999999999999999999999998876 689999999999


Q ss_pred             ccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          140 VLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       140 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      ..+.++...|+++|++++.|+    .++...||++++|+||+++|+|...    ......+...  .....+|+++++.+
T Consensus       406 ~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~----~~~~~~~~~~--g~~~l~pee~a~~l  475 (525)
T 3qp9_A          406 IWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTE----GATGERLRRL--GLRPLAPATALTAL  475 (525)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGS----SHHHHHHHHT--TBCCBCHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccc----hhhHHHHHhc--CCCCCCHHHHHHHH
Confidence            999999999999999998874    5667789999999999999998742    1222222221  12446899999999


Q ss_pred             HHHcCCCC
Q 041276          220 AFLCMPAA  227 (251)
Q Consensus       220 ~~l~~~~~  227 (251)
                      .++++...
T Consensus       476 ~~~l~~~~  483 (525)
T 3qp9_A          476 DTALGHGD  483 (525)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhCCC
Confidence            99997543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=2.3e-28  Score=246.51  Aligned_cols=222  Identities=17%  Similarity=0.183  Sum_probs=163.6

Q ss_pred             cCCCCCEEEEecCCCC-cC-------------------cHHH-----HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKG-LG-------------------NEAE-----LNECLREWKTKCFKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        13 ~~l~~k~vlItGas~g-iG-------------------~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ..++||++|||||++| ||                   +.+.     ++++.+++...+.++..+.+|+++.++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            3489999999999999 99                   2122     555666666667789999999999999999999


Q ss_pred             HHHH----hcCCCccEEEEcccC----CCCCCCCCCCCHHH----HHHHHHhhhHHHHHHHHHHHHHHHhCCCc----eE
Q 041276           68 QVSS----LFNGKLNILINNVGT----NYTTKPTVEYMAED----LSFLMSTNFESAYHLSQLAHPLLKASGAG----NI  131 (251)
Q Consensus        68 ~i~~----~~~~~id~lv~~ag~----~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~m~~~~~g----~i  131 (251)
                      ++.+    .| |++|+||||||+    ........+.+.++    ++..+++|+.+.+.+++.+.+.|++++.+    .+
T Consensus      2212 ~i~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2212 WVGTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHTSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            9998    88 899999999997    21112222223333    45559999999999999999999887542    23


Q ss_pred             EEecccccccCCCCChhhHHhHHHHHHHHHHHHHH--HccCCeEEEEEecCccc-CCCCCCCCCCHHHHHHHhhCCCCCC
Q 041276          132 ILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE--WARDNIRINSVAPWFIT-TPLTEPYLSDEKFLEEVKCRTPMER  208 (251)
Q Consensus       132 v~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~~i~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~  208 (251)
                      +..++..+..  ++...|++||+|+.+|+|+++.|  +++ +|+||+++||+++ |++........    ......+.++
T Consensus      2291 ~~~ss~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~~----~~~~~~~~r~ 2363 (3089)
T 3zen_D         2291 LPGSPNRGMF--GGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAIV----SAVEEAGVTT 2363 (3089)
T ss_dssp             EEECSSTTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTTH----HHHGGGSCBC
T ss_pred             EECCcccccC--CCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhHH----HHHHhcCCCC
Confidence            3334333322  34568999999999999999999  665 6999999999999 77654321111    1222334433


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCc-cccEEEeC--CCccc
Q 041276          209 PGEPKEVSSLVAFLCMPAASYI-TGQTICVD--GGFTV  243 (251)
Q Consensus       209 ~~~~~dva~~~~~l~~~~~~~~-~G~~i~vd--gG~~~  243 (251)
                       .+|+|||..++||+|+.++++ +|+.+.+|  ||+.-
T Consensus      2364 -~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2364 -YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             -EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             -CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence             499999999999999887655 55655555  99864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.93  E-value=4.7e-26  Score=199.92  Aligned_cols=196  Identities=21%  Similarity=0.223  Sum_probs=155.8

Q ss_pred             CCEEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           17 GMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        17 ~k~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +|++|||||++|||                       +.+.++++.+++.+.+.++.++.+|++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999                       123456677778777889999999999999999999998766 


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||+.....++.+.+.++|++.+++|+.+++++.+.+    ++...++||++||+++..+.++...|+++|
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~----~~~~~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELT----ADLDLDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHh----hccCCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence             589999999999733778889999999999999999999998876    444568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      ++++.|++.+    ..+||++++|+||++.++.....   ......+... . ....+|+++++.+..++....
T Consensus       393 a~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~---~~~~~~l~~~-g-~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          393 AYLDALAEHR----RSLGLTASSVAWGTWGEVGMATD---PEVHDRLVRQ-G-VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHH----HHTTCCCEEEEECEESSSCC---------CHHHHHT-T-EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH----HhcCCeEEEEECCcccCCccccC---hHHHHHHHhc-C-CCCCCHHHHHHHHHHHHcCCC
Confidence            9998887744    45799999999998876644321   1111111111 1 123489999999999886443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.92  E-value=1.1e-25  Score=208.30  Aligned_cols=199  Identities=22%  Similarity=0.240  Sum_probs=159.2

Q ss_pred             CCCEEEEecCCCCcC---------------------c---HHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLG---------------------N---EAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        16 ~~k~vlItGas~giG---------------------~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .+|++|||||++|||                     +   .+.++++.+++.+.+.++.++.||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            589999999999999                     1   2345667777777788999999999999999999999877


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+  +||+||||||+.. ...+.+.+.++|++.+++|+.+++++.+++.|.|      +||++||+++..+.+++..|++
T Consensus       609 ~~--~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH--PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS--CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC--CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHH
Confidence            64  8999999999987 6788899999999999999999999999987776      7999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +|+    |+++|++++.++||++|+|+||++.|++...... +...... .+..... .++++....+...+......+
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~-~~~~~~~-~~~g~~~-l~~~e~~~~~~~~l~~~~~~~  751 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLR-EAEQDRL-ARSGLLP-ISTEEGLSQFDAACGGAHTVV  751 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH-HHHHHHH-HHTTBCC-CCHHHHHHHHHHHHTSSCSSC
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhcccc-HHHHHHH-HhcCCCC-CCHHHHHHHHHHHHhCCCcEE
Confidence            995    6777778888889999999999999886432111 1111222 2233333 467777777766665444333

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.91  E-value=8.6e-24  Score=185.93  Aligned_cols=194  Identities=19%  Similarity=0.152  Sum_probs=152.6

Q ss_pred             CCCCEEEEecCCCCcC--------------------cH---HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLG--------------------NE---AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..++++|||||++|||                    +.   ..++++.+++...+.++.++.+|++|.++++++++.+ .
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            4679999999999999                    11   2345666677777778999999999999999999998 5


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      .+ +++|+||||||... ...+.+.+.+++++.+++|+.+++++.+.+    ++.+.++||++||.++..+.++...|++
T Consensus       303 ~~-g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~----~~~~~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          303 DD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             TT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             hc-CCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHh----CcCCCCEEEEEcChHhcCCCCCCHHHHH
Confidence            56 79999999999876 667888999999999999999999999876    4446689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC-CCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +|++++.|++.+    ...|+++++|+||++.++ |....     ....+. + ......+++++++.+..++...
T Consensus       377 aka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~-----~~~~~~-~-~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          377 GNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGP-----VADRFR-R-HGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             HHHHHHHHHHHH----HHTTCCCEEEEECCBC-----------------CT-T-TTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchh-----HHHHHH-h-cCCCCCCHHHHHHHHHHHHhCC
Confidence            999998886544    456999999999999876 43221     111111 0 1113568999999999998644

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=4.3e-24  Score=171.14  Aligned_cols=190  Identities=20%  Similarity=0.183  Sum_probs=139.6

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------------EEEeccCCCHHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------------TGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------------~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ..+...+++|+||||||+|+||     ..+++.+.+.|.++                   .++.+|++         +.+
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG-----~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~---------~~~   78 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVA-----RYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE---------EDF   78 (236)
T ss_dssp             --------CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT---------SCC
T ss_pred             cccccCcCCCeEEEECCCChHH-----HHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH---------HHH
Confidence            3456778999999999999999     77777777666444                   45555665         344


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC---CCC
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST---NLG  146 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~---~~~  146 (251)
                      .+.+ +++|+||||||... .        ++++..+++|+.+++.+++++    ++.+.++||++||..+..+.   +..
T Consensus        79 ~~~~-~~~D~vi~~ag~~~-~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~~  144 (236)
T 3e8x_A           79 SHAF-ASIDAVVFAAGSGP-H--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMNM  144 (236)
T ss_dssp             GGGG-TTCSEEEECCCCCT-T--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGGG
T ss_pred             HHHH-cCCCEEEECCCCCC-C--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhhh
Confidence            4556 78999999999754 1        347889999999999999887    44456899999998777664   467


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|+.+|++.+.+++       ..|++++.++||++.++.........      ........+.+++|+|+.+++++...
T Consensus       145 ~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~~~~~~~  211 (236)
T 3e8x_A          145 RHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVS------PHFSEITRSITRHDVAKVIAELVDQQ  211 (236)
T ss_dssp             HHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEE------SSCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred             hhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEec------cCCCcccCcEeHHHHHHHHHHHhcCc
Confidence            899999999998876       47999999999999998754321100      01112245678999999999999754


Q ss_pred             CCCccccEEEeCCCc
Q 041276          227 ASYITGQTICVDGGF  241 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~  241 (251)
                      .  .+|+.+.+++|.
T Consensus       212 ~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          212 H--TIGKTFEVLNGD  224 (236)
T ss_dssp             G--GTTEEEEEEECS
T ss_pred             c--ccCCeEEEeCCC
Confidence            3  789999998873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.90  E-value=3.2e-22  Score=176.67  Aligned_cols=191  Identities=20%  Similarity=0.179  Sum_probs=152.7

Q ss_pred             CCCCEEEEecCCCCcC--------------------cH---HHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLG--------------------NE---AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..+|++|||||++|||                    +.   ..++++.+++...+.++.++.+|++|.++++++++.   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            3579999999999999                    11   234556667777677899999999999999999876   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                         +++|+||||||+.. ...+.+.+.++++..+++|+.+.+++.+.+.+.   .+.++||++||.++..+.++...|++
T Consensus       334 ---~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             ---SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             ---CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHH
Confidence               58999999999876 667788999999999999999999998875321   14589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcc-cCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFI-TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      +|++++.|++.+    ...|+++++|+||++ .|+|....    . ......  ......+|+++++.+...+...
T Consensus       407 aKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~----~-~~~~~~--~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          407 ANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGA----G-EESLSR--RGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCH----H-HHHHHH--HTBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccc----c-HHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence            999999998764    356999999999998 78876532    1 111111  1113468999999999988643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.89  E-value=2.1e-22  Score=164.37  Aligned_cols=180  Identities=15%  Similarity=0.140  Sum_probs=139.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      ++|+||||||+||||     ..+++.|.+.|.               ++.++.+|++|++++++++        .++|+|
T Consensus         2 ~~k~vlVTGasg~IG-----~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~D~v   68 (267)
T 3rft_A            2 AMKRLLVTGAAGQLG-----RVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMV--------AGCDGI   68 (267)
T ss_dssp             CEEEEEEESTTSHHH-----HHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHH--------TTCSEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHH--------cCCCEE
Confidence            468999999999999     888888876543               4566789999999999988        479999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc------------cCCCCChh
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV------------LSTNLGTI  148 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~------------~~~~~~~~  148 (251)
                      |||||...         .+.|++.+++|+.+++.+++++    ++.+.++||++||..++            .+.++...
T Consensus        69 i~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~  135 (267)
T 3rft_A           69 VHLGGISV---------EKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGL  135 (267)
T ss_dssp             EECCSCCS---------CCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSH
T ss_pred             EECCCCcC---------cCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCCh
Confidence            99999743         2347889999999999999998    44566899999998887            33445678


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+.||++.+.+++.++.++   |++++.|.||.+.+++...     +...         .+..++|+++.+..++.... 
T Consensus       136 Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~-----~~~~---------~~~~~~d~a~~~~~~~~~~~-  197 (267)
T 3rft_A          136 YGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY-----RMLS---------TWFSHDDFVSLIEAVFRAPV-  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST-----THHH---------HBCCHHHHHHHHHHHHHCSC-
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC-----Ccee---------eEEcHHHHHHHHHHHHhCCC-
Confidence            9999999999999999874   7899999999998875432     1111         13478999999988885432 


Q ss_pred             CccccEEEeCCC
Q 041276          229 YITGQTICVDGG  240 (251)
Q Consensus       229 ~~~G~~i~vdgG  240 (251)
                       ..+..+.+.++
T Consensus       198 -~~~~~~~~~s~  208 (267)
T 3rft_A          198 -LGCPVVWGASA  208 (267)
T ss_dssp             -CCSCEEEECCC
T ss_pred             -CCceEEEEeCC
Confidence             22345554443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=2.9e-22  Score=167.41  Aligned_cols=206  Identities=14%  Similarity=0.068  Sum_probs=152.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee--------------EEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV--------------TGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~--------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ....|+||||||+|+||     ..+++.|.+.|.++              .++.+|++|+++++++++.      +++|+
T Consensus         9 ~~~~~~vlVTGatG~iG-----~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~------~~~d~   77 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVG-----KYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD------IKPDY   77 (321)
T ss_dssp             ----CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHH------HCCSE
T ss_pred             ccCcceEEEECCCChHH-----HHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHh------cCCCE
Confidence            34569999999999999     88888888776544              4567899999999988865      37999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-------------CCC
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-------------NLG  146 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-------------~~~  146 (251)
                      |||+||... .    ..+.++++..+++|+.++..+++++ +.+  .+.++||++||.+.+...             ++.
T Consensus        78 vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~  149 (321)
T 2pk3_A           78 IFHLAAKSS-V----KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPM  149 (321)
T ss_dssp             EEECCSCCC-H----HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC
T ss_pred             EEEcCcccc-h----hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC
Confidence            999999754 1    1122357889999999999999998 554  245899999998765432             346


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh---C--C---------CCCCCCCH
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC---R--T---------PMERPGEP  212 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~---~--~---------~~~~~~~~  212 (251)
                      ..|+.+|++.+.+++.++.+   .|++++.+.|+.+.+|..........+......   .  .         +...+..+
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v  226 (321)
T 2pk3_A          150 SPYGVSKASVGMLARQYVKA---YGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV  226 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred             CccHHHHHHHHHHHHHHHHH---cCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence            78999999999999999887   489999999999999876532111222222222   1  1         11235679


Q ss_pred             HHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          213 KEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       213 ~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +|+|++++.++...   .+|+.+.+++|..++
T Consensus       227 ~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s  255 (321)
T 2pk3_A          227 RDIVQAYWLLSQYG---KTGDVYNVCSGIGTR  255 (321)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEESCSCEEE
T ss_pred             HHHHHHHHHHHhCC---CCCCeEEeCCCCCee
Confidence            99999999999654   468999999987543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.88  E-value=1e-22  Score=163.56  Aligned_cols=180  Identities=17%  Similarity=0.156  Sum_probs=135.5

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--ee------------------EEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--KV------------------TGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--~~------------------~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+.+|+||||||+||||     ..+++.+.+.|.  ++                  .++.+|++|++++++++       
T Consensus        15 ~m~~~~vlVtGasg~iG-----~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------   82 (242)
T 2bka_A           15 RMQNKSVFILGASGETG-----RVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAF-------   82 (242)
T ss_dssp             HHTCCEEEEECTTSHHH-----HHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGG-------
T ss_pred             hhcCCeEEEECCCcHHH-----HHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHh-------
Confidence            36789999999999999     788888777665  44                  34567888887776665       


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       .++|+||||||... .       .+.++..+++|+.++..+++++    ++.+.++||++||..++.+  ....|+.+|
T Consensus        83 -~~~d~vi~~ag~~~-~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~sK  147 (242)
T 2bka_A           83 -QGHDVGFCCLGTTR-G-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQVK  147 (242)
T ss_dssp             -SSCSEEEECCCCCH-H-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred             -cCCCEEEECCCccc-c-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHHH
Confidence             47999999999643 1       2356889999999998888764    5556689999999887653  356899999


Q ss_pred             HHHHHHHHHHHHHHccCCe-EEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC----CCCCCCHHHHHHHHHHHcCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNI-RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP----MERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      ++++.+++.+       ++ +++.|+||++.+++..... .+..........|    .+++.+++|+|+++++++++...
T Consensus       148 ~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          148 GEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            9999998753       45 7999999999999754311 1222233333344    45678999999999999986554

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.88  E-value=1e-21  Score=165.07  Aligned_cols=202  Identities=15%  Similarity=0.074  Sum_probs=148.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--C------------------------eeEEEeccCCCHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC--F------------------------KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~--~------------------------~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ++++||||||+|+||     ..+++.+.+.+  .                        ++.++.+|++|++++++++   
T Consensus         2 ~~m~vlVTGatG~iG-----~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIG-----SNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV---   73 (336)
T ss_dssp             -CCEEEEETTTSHHH-----HHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH---
T ss_pred             CCCeEEEECCCchHH-----HHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh---
Confidence            357899999999999     66666665543  2                        3556778999999988887   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc--------
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL--------  141 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~--------  141 (251)
                           +++|+|||+||...     .+.+.++++..+++|+.++..+++++.+.   ...++||++||.+.+.        
T Consensus        74 -----~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~  140 (336)
T 2hun_A           74 -----RKVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFT  140 (336)
T ss_dssp             -----HTCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBC
T ss_pred             -----hCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcC
Confidence                 37999999999753     12234567789999999999999999776   2237999999976432        


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC---------CCCC
Q 041276          142 ---STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP---------MERP  209 (251)
Q Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~  209 (251)
                         +......|+.+|++.+.+++.++.+   .|++++.++|+.+.+|..........+........+         ...+
T Consensus       141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (336)
T 2hun_A          141 ENDRLMPSSPYSATKAASDMLVLGWTRT---YNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDW  217 (336)
T ss_dssp             TTBCCCCCSHHHHHHHHHHHHHHHHHHH---TTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEE
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeee
Confidence               2344568999999999999999887   489999999999999875321111223333322211         1234


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ..++|+|++++.++...   .+|+.+.+++|..++
T Consensus       218 i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~s  249 (336)
T 2hun_A          218 LYVEDHVRAIELVLLKG---ESREIYNISAGEEKT  249 (336)
T ss_dssp             EEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred             EEHHHHHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence            57999999999998542   379999999997543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.88  E-value=9.8e-22  Score=166.74  Aligned_cols=204  Identities=14%  Similarity=0.103  Sum_probs=151.3

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhc-CC------------------------eeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTK-CF------------------------KVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~-~~------------------------~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +||||||+|+||     ..+++.|.+. +.                        ++.++.+|++|++++.+++++     
T Consensus         2 kvlVTGasG~iG-----~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   71 (361)
T 1kew_A            2 KILITGGAGFIG-----SAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ-----   71 (361)
T ss_dssp             EEEEESTTSHHH-----HHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH-----
T ss_pred             EEEEECCCchHh-----HHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh-----
Confidence            599999999999     6666666544 22                        355678899999999988865     


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-----CceEEEeccccccc-------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-----AGNIILVSSVCGVL-------  141 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-----~g~iv~vss~~~~~-------  141 (251)
                       .++|+|||+||...     .+.+.++++..+++|+.+++.+++++.+.|+..+     .++||++||.+.+.       
T Consensus        72 -~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~  145 (361)
T 1kew_A           72 -YQPDAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             -HCCSEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             -cCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence             37999999999753     1223456788999999999999999999876422     35999999975432       


Q ss_pred             --------------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC--
Q 041276          142 --------------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP--  205 (251)
Q Consensus       142 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~--  205 (251)
                                    +.+....|+.+|++.+.+++.++.++   |++++.++||.+.+|..........+........+  
T Consensus       146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  222 (361)
T 1kew_A          146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEE
T ss_pred             ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCce
Confidence                          12345689999999999999999875   79999999999999976421111223333322221  


Q ss_pred             -------CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 -------MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 -------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                             ...+..++|+|+++++++...   .+|+.+.+++|..++
T Consensus       223 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  265 (361)
T 1kew_A          223 IYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK  265 (361)
T ss_dssp             EETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             EcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeee
Confidence                   123457999999999999643   479999999987543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=4.6e-21  Score=161.75  Aligned_cols=207  Identities=13%  Similarity=0.058  Sum_probs=148.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC--------------------------CeeEEEeccCCCHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC--------------------------FKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~D~~~~~~~~~~   65 (251)
                      ++.+.+|+||||||+|+||     ..+++.|.+.|                          .++.++.+|++|++++.++
T Consensus        19 ~~~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIG-----SNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             -----CEEEEEETTTSHHH-----HHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHH-----HHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHH
Confidence            4557889999999999999     77777776654                          2456778999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-  144 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-  144 (251)
                      ++.      .++|+|||+|+....     ....++....+++|+.++..+++++    ++.+.++||++||...+...+ 
T Consensus        94 ~~~------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~  158 (346)
T 4egb_A           94 IKE------RDVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGK  158 (346)
T ss_dssp             HHH------HTCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCS
T ss_pred             Hhh------cCCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCc
Confidence            875      269999999997641     2234567789999999999998887    445567899999986654331 


Q ss_pred             -----------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC------
Q 041276          145 -----------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME------  207 (251)
Q Consensus       145 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~------  207 (251)
                                 +...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.+|..........+........+..      
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKT---YQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGL  235 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSC
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCC
Confidence                       2368999999999999999887   37999999999999886543211233344444333322      


Q ss_pred             ---CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          208 ---RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       208 ---~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                         .+..++|+|++++.++....   .|+.+.+.+|..++
T Consensus       236 ~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s  272 (346)
T 4egb_A          236 NVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKT  272 (346)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEE
T ss_pred             eEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCcee
Confidence               12348999999999996543   78999999987543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.87  E-value=2.3e-21  Score=163.49  Aligned_cols=201  Identities=14%  Similarity=0.087  Sum_probs=147.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------------eeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF------------------------KVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------------~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      |+||||||+|+||     ..+++.|.+.|.                        ++.++.+|++|+++++++++.     
T Consensus         2 ~~vlVTGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----   71 (347)
T 1orr_A            2 AKLLITGGCGFLG-----SNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK-----   71 (347)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----
T ss_pred             cEEEEeCCCchhH-----HHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc-----
Confidence            6899999999999     555555544332                        356678899999999988865     


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc------------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL------------  141 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~------------  141 (251)
                       .++|+|||+||... .    +.+.++++..+++|+.++..+++++.+.+.+   ++||++||.+.+.            
T Consensus        72 -~~~d~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---~~iv~~SS~~v~g~~~~~~~~e~~~  142 (347)
T 1orr_A           72 -YMPDSCFHLAGQVA-M----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---CNIIYSSTNKVYGDLEQYKYNETET  142 (347)
T ss_dssp             -HCCSEEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEEGGGGTTCTTSCEEECSS
T ss_pred             -cCCCEEEECCcccC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---ceEEEeccHHHhCCCCcCCcccccc
Confidence             26999999999643 1    2234567889999999999999999776532   6899999976543            


Q ss_pred             ---------------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhC
Q 041276          142 ---------------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCR  203 (251)
Q Consensus       142 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~  203 (251)
                                     +......|+.+|++.+.+++.++.++   |++++.+.||.+.++........   ..+.......
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  219 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEI  219 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHH
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhC
Confidence                           12345789999999999999998874   89999999999999976432111   1222222111


Q ss_pred             C-----CCC---------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          204 T-----PME---------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       204 ~-----~~~---------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      .     |..         .+..++|+|+++++++.. ....+|+.+.+++|.
T Consensus       220 ~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          220 KNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             cccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            1     221         245799999999999853 234689999999985

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=2.3e-20  Score=156.68  Aligned_cols=200  Identities=13%  Similarity=0.084  Sum_probs=140.9

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe--------------------eEEEeccCCCHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK--------------------VTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~--------------------~~~~~~D~~~~~~~~~~~~~   68 (251)
                      ..+...+++|+||||||+|+||     ..+++.+.+.|.+                    +.++.+|++|.+++++++++
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLG-----SNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHH-----HHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCcccCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence            3456778999999999999999     7888887765432                    45677899999999988865


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----  143 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----  143 (251)
                      +      ++|+|||+||... ..     +.++++  +++|+.+++.+++++.    +.+.++||++||.+.+...     
T Consensus        87 ~------~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~  148 (330)
T 2pzm_A           87 F------KPTHVVHSAAAYK-DP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPI  148 (330)
T ss_dssp             H------CCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSB
T ss_pred             c------CCCEEEECCccCC-Cc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCC
Confidence            3      6999999999764 21     334555  9999999999999985    3355799999998776443     


Q ss_pred             C------CChhhHHhHHHHHHHHHHHHHHHccCCeE-EEEEecCcccCCCCCCCCCCHHHHHHHhhCCC------CCCCC
Q 041276          144 N------LGTIYAATKGAMNQLAKNLACEWARDNIR-INSVAPWFITTPLTEPYLSDEKFLEEVKCRTP------MERPG  210 (251)
Q Consensus       144 ~------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~  210 (251)
                      +      +...|+.+|++.+.+++.+  ++....+| ++.+.||. .+++.      ..+........+      ...+.
T Consensus       149 ~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~i  219 (330)
T 2pzm_A          149 PIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPI------PTFYKRLKAGQKCFCSDTVRDFL  219 (330)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHH------HHHHHHHHTTCCCCEESCEECEE
T ss_pred             CcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHH------HHHHHHHHcCCEEeCCCCEecce
Confidence            2      5678999999999999876  33223344 34444542 11111      122222211111      23457


Q ss_pred             CHHHHHH-HHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          211 EPKEVSS-LVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       211 ~~~dva~-~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .++|+|+ ++++++....    |+.+.+++|..++
T Consensus       220 ~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s  250 (330)
T 2pzm_A          220 DMSDFLAIADLSLQEGRP----TGVFNVSTGEGHS  250 (330)
T ss_dssp             EHHHHHHHHHHHTSTTCC----CEEEEESCSCCEE
T ss_pred             eHHHHHHHHHHHHhhcCC----CCEEEeCCCCCCC
Confidence            8999999 9999997532    8999999987654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.86  E-value=1.5e-20  Score=159.17  Aligned_cols=206  Identities=10%  Similarity=-0.019  Sum_probs=151.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------------CeeEEEeccCCCHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------------FKVTGSVCDASSRAERE   63 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~D~~~~~~~~   63 (251)
                      +++.+|+||||||+|+||     ..+++.+.+.+                             .++.++.+|++|.+++.
T Consensus        23 ~~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   97 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIG-----SNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN   97 (352)
T ss_dssp             HHHSCCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred             cCccCCeEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence            446789999999999999     44444444332                             24667788999998888


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      +++        .++|+|||+||... .    ..+.++++..+++|+.++..+++++.+    .+.++||++||...+.+.
T Consensus        98 ~~~--------~~~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~  160 (352)
T 1sb8_A           98 NAC--------AGVDYVLHQAALGS-V----PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDH  160 (352)
T ss_dssp             HHH--------TTCSEEEECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTC
T ss_pred             HHh--------cCCCEEEECCcccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCC
Confidence            777        47999999999653 1    113456788999999999999998843    455799999998776543


Q ss_pred             C-----------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--C--CHHHHHHHhhCCCC--
Q 041276          144 N-----------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--S--DEKFLEEVKCRTPM--  206 (251)
Q Consensus       144 ~-----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--~--~~~~~~~~~~~~~~--  206 (251)
                      +           +...|+.+|.+.+.+++.++.+.   |++++.+.||.+.+|......  .  ...+........+.  
T Consensus       161 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (352)
T 1sb8_A          161 PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI  237 (352)
T ss_dssp             CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEE
Confidence            2           35689999999999999998874   799999999999998754321  1  12233333333222  


Q ss_pred             -------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          207 -------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       207 -------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                             ..+..++|+|++++.++... ....|+.+.+.+|..++
T Consensus       238 ~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s  281 (352)
T 1sb8_A          238 NGDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTS  281 (352)
T ss_dssp             ESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred             eCCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCcc
Confidence                   13567999999999888642 24578999999886543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.86  E-value=1.9e-20  Score=148.33  Aligned_cols=171  Identities=8%  Similarity=-0.025  Sum_probs=125.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHH-hc---------------------CCeeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWK-TK---------------------CFKVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~-~~---------------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      |+||||||+|+||     ..+++.+. +.                     +.++.++.+|++|++++++++        .
T Consensus         6 k~vlVtGasg~iG-----~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~   72 (221)
T 3r6d_A            6 XYITILGAAGQIA-----QXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV--------T   72 (221)
T ss_dssp             SEEEEESTTSHHH-----HHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH--------T
T ss_pred             EEEEEEeCCcHHH-----HHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH--------c
Confidence            7899999999999     55555544 33                     234667788999999988887        4


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh--------
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT--------  147 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~--------  147 (251)
                      ++|+||||+|..                    |+.     ++.+++.|++.+.++||++||..++.+.+...        
T Consensus        73 ~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~  127 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL  127 (221)
T ss_dssp             TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTS
T ss_pred             CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccc
Confidence            799999999853                    222     78888999988888999999999887665444        


Q ss_pred             --hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC-CCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc-
Q 041276          148 --IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP-LTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-  223 (251)
Q Consensus       148 --~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-  223 (251)
                        .|+.+|.+++.+++.       .|++++.|+||++.++ ....+....      ......+.+.+++|+|+.+++++ 
T Consensus       128 ~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~------~~~~~~~~~~~~~dvA~~~~~l~~  194 (221)
T 3r6d_A          128 PISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP------EGAQFNDAQVSREAVVKAIFDILH  194 (221)
T ss_dssp             CHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC------TTSCCCCCEEEHHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc------CCccCCCceeeHHHHHHHHHHHHH
Confidence              899999999887752       6899999999999888 332221100      01112233678999999999999 


Q ss_pred             -CCCCCCccccEEEeCCC
Q 041276          224 -MPAASYITGQTICVDGG  240 (251)
Q Consensus       224 -~~~~~~~~G~~i~vdgG  240 (251)
                       ++...++++ .+.+.+.
T Consensus       195 ~~~~~~~~~~-~~~i~~~  211 (221)
T 3r6d_A          195 AADETPFHRT-SIGVGEP  211 (221)
T ss_dssp             CSCCGGGTTE-EEEEECT
T ss_pred             hcChhhhhcc-eeeecCC
Confidence             877766555 5554443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.86  E-value=7.8e-21  Score=160.55  Aligned_cols=196  Identities=15%  Similarity=0.049  Sum_probs=146.8

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CC-----------------------eeEEEeccCCCHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK-CF-----------------------KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+++|+||||||+|+||     ..+++.+.+. +.                       ++.++.+|++|.+++++++   
T Consensus        18 ~~~~k~vlVTGatG~iG-----~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~---   89 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFG-----KCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL---   89 (344)
T ss_dssp             TTTTCEEEEETTTSHHH-----HHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT---
T ss_pred             hhCCCEEEEECCCcHHH-----HHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH---
Confidence            36789999999999999     5555555554 43                       4556778999998888776   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                           .++|+|||+||... . +   .......+.+++|+.++.++++++.+    .+.++||++||..+..+   ...|
T Consensus        90 -----~~~D~Vih~Aa~~~-~-~---~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y  152 (344)
T 2gn4_A           90 -----EGVDICIHAAALKH-V-P---IAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLY  152 (344)
T ss_dssp             -----TTCSEEEECCCCCC-H-H---HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHH
T ss_pred             -----hcCCEEEECCCCCC-C-C---chhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHH
Confidence                 47999999999753 1 1   11233568999999999999999855    34579999999876543   4689


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCC-C--------CCCCCCHHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT-P--------MERPGEPKEVSSLVA  220 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~dva~~~~  220 (251)
                      +.||++.+.+++.++.++++.|++++.+.||.+.++....   .+.+........ +        ...+.+++|+|+.++
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~---i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~  229 (344)
T 2gn4_A          153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV---VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVL  229 (344)
T ss_dssp             HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH---HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH---HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHH
Confidence            9999999999999998888889999999999999875321   123333332221 1        112468999999999


Q ss_pred             HHcCCCCCCccccEEEeCCC
Q 041276          221 FLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG  240 (251)
                      .++...   ..|+.+.++++
T Consensus       230 ~~l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          230 KSLKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHHHC---CSSCEEEECCC
T ss_pred             HHHhhc---cCCCEEecCCC
Confidence            998643   35888888776

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.85  E-value=1.1e-20  Score=159.01  Aligned_cols=200  Identities=13%  Similarity=0.109  Sum_probs=142.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------------CeeEEE-eccCCCHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC-------------------------FKVTGS-VCDASSRAEREKLMK   67 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-------------------------~~~~~~-~~D~~~~~~~~~~~~   67 (251)
                      .+++|+||||||+|+||     ..+++.+.+.|                         .++.++ .+|++|.+++++++ 
T Consensus         8 ~~~~~~vlVTGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVA-----SHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-
T ss_pred             CCCCCEEEEECCccHHH-----HHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-
Confidence            46789999999999999     44444444333                         245556 67888877766655 


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CC---
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-ST---  143 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~---  143 (251)
                             .++|+|||+||... ..       +++.+.+++|+.++..+++++.+   +.+.++||++||.+.+. +.   
T Consensus        82 -------~~~d~vih~A~~~~-~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~  143 (342)
T 1y1p_A           82 -------KGAAGVAHIASVVS-FS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNV  143 (342)
T ss_dssp             -------TTCSEEEECCCCCS-CC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTC
T ss_pred             -------cCCCEEEEeCCCCC-CC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCC
Confidence                   47999999999764 21       13567899999999999998743   23457999999987753 21   


Q ss_pred             ---------------------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---
Q 041276          144 ---------------------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---  193 (251)
Q Consensus       144 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---  193 (251)
                                                 .+...|+.||.+.+.+++.++.++.. +++++.++||.+.++........   
T Consensus       144 ~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~  222 (342)
T 1y1p_A          144 EGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGST  222 (342)
T ss_dssp             CCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHH
T ss_pred             CCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccH
Confidence                                       12357999999999999999999865 89999999999999986543211   


Q ss_pred             HHHHHHHhhCC--------CCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          194 EKFLEEVKCRT--------PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       194 ~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                      ..+........        +...+..++|+|++++.++..  ...+|+.+.++|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence            22222222111        233457899999999998854  3356877766665

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.85  E-value=2e-20  Score=157.45  Aligned_cols=207  Identities=12%  Similarity=0.055  Sum_probs=146.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+|+||||||+|+||     ..+++.|.+.|.                         .+.++.+|++|+++++++++.  
T Consensus         4 ~~~~vlVTGatG~iG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIG-----SHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA--   76 (341)
T ss_dssp             SSCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH--
T ss_pred             CCcEEEEecCCcHHH-----HHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc--
Confidence            468999999999999     666666655443                         455678999999999999875  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC--------
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS--------  142 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~--------  142 (251)
                          .++|+|||+||... ..    ...+...+.+++|+.+++.++++    +++.+.++||++||.+.+..        
T Consensus        77 ----~~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~iv~~SS~~~~g~~~~~~~~e  143 (341)
T 3enk_A           77 ----HPITAAIHFAALKA-VG----ESVAKPIEYYRNNLDSLLSLLRV----MRERAVKRIVFSSSATVYGVPERSPIDE  143 (341)
T ss_dssp             ----SCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHH----HHHTTCCEEEEEEEGGGBCSCSSSSBCT
T ss_pred             ----cCCcEEEECccccc-cC----ccccChHHHHHHHHHHHHHHHHH----HHhCCCCEEEEEecceEecCCCCCCCCC
Confidence                48999999999754 11    12334457888999999887765    46666689999999776522        


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-------C---HHHHHHHhhC-CCC--
Q 041276          143 ---TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-------D---EKFLEEVKCR-TPM--  206 (251)
Q Consensus       143 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-------~---~~~~~~~~~~-~~~--  206 (251)
                         ......|+.+|.+.+.+++.++.++.  +++++.+.|+.+.+|.......       .   +.+....... .+.  
T Consensus       144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (341)
T 3enk_A          144 TFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRV  221 (341)
T ss_dssp             TSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEE
Confidence               22346899999999999999998843  5999999999998875422111       0   1111212111 111  


Q ss_pred             -------------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          207 -------------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       207 -------------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                                   ..+..++|+|++++.++........|+.+++.+|..++
T Consensus       222 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  272 (341)
T 3enk_A          222 FGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS  272 (341)
T ss_dssp             ECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred             eCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence                         12446799999999988542223468999999987654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.85  E-value=1.6e-21  Score=163.30  Aligned_cols=206  Identities=14%  Similarity=0.041  Sum_probs=154.9

Q ss_pred             cCCCCCEEEEecCCCCcCcH--------------------------------HHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 041276           13 WSLQGMTALVTGGTKGLGNE--------------------------------AELNECLREWKTKCFKVTGSVCDASSRA   60 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~   60 (251)
                      ..+.+|+|||||||+|||.+                                ....++.+.+++.|.+...+.||+++++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            45678999999999999911                                1234556677788899999999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCCC---------------------------------CCCCCHHHH---HHH
Q 041276           61 EREKLMKQVSSLFNGKLNILINNVGTNYTTKP---------------------------------TVEYMAEDL---SFL  104 (251)
Q Consensus        61 ~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~---------------------------------~~~~~~~~~---~~~  104 (251)
                      +++++++++++.+ |+||+|||+++...+..+                                 +.-.+.+++   .+.
T Consensus       126 ~i~~vi~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          126 IKAQVIEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            9999999999999 899999999997632111                                 011234444   455


Q ss_pred             HHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC--ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcc
Q 041276          105 MSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL--GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI  182 (251)
Q Consensus       105 ~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v  182 (251)
                      |....|+.+...+...+.|.+  +++++.+|++.+....|.  .+.++++|++|+..++.|+.++++  ++++.++||.+
T Consensus       205 Mg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~  280 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGL  280 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCC
T ss_pred             HhhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcc
Confidence            666778888888777777754  489999999988765554  458999999999999999999874  89999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          183 TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       183 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      .|.....+..-+-......+  -++..++-|.+.+.+..|..+
T Consensus       281 vT~AssaIP~~ply~~~l~k--vmk~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          281 VTRASAVIPVIPLYLASLFK--VMKEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             CCTTGGGSSSHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHH
T ss_pred             ccchhhcCCCchHHHHHHHH--HHHhcCCCCchHHHHHHHHHH
Confidence            99987766543332222211  123345667888888888854

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=2.5e-20  Score=149.29  Aligned_cols=175  Identities=14%  Similarity=0.077  Sum_probs=124.8

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-Ce------------------eEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC-FK------------------VTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +..|+||||||+|+||     ..+++.|.+.| .+                  +.++.+|++|++++++++        .
T Consensus        21 ~~mk~vlVtGatG~iG-----~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIA-----RHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAM--------Q   87 (236)
T ss_dssp             -CCEEEEEETTTSHHH-----HHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHH--------T
T ss_pred             CcccEEEEEeCCcHHH-----HHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHh--------c
Confidence            4468999999999999     88888887766 33                  455688999999999887        4


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC---------
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG---------  146 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~---------  146 (251)
                      ++|+||||+|...         .              ...++.+++.|++.+.++||++||...+.+.+..         
T Consensus        88 ~~D~vv~~a~~~~---------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~  144 (236)
T 3qvo_A           88 GQDIVYANLTGED---------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVI  144 (236)
T ss_dssp             TCSEEEEECCSTT---------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------
T ss_pred             CCCEEEEcCCCCc---------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcc
Confidence            7999999998521         0              1235678888998888999999998877654432         


Q ss_pred             ----hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC-CCCCCCHHHHHHHHHH
Q 041276          147 ----TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP-MERPGEPKEVSSLVAF  221 (251)
Q Consensus       147 ----~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~  221 (251)
                          ..|..+|           ..+.+.|++++.|+||++.++........       ....+ .+++.+++|+|+.+++
T Consensus       145 ~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~-------~~~~~~~~~~i~~~DvA~~i~~  206 (236)
T 3qvo_A          145 GEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYELT-------SRNEPFKGTIVSRKSVAALITD  206 (236)
T ss_dssp             CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCEEE-------CTTSCCSCSEEEHHHHHHHHHH
T ss_pred             cchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceEEe-------ccCCCCCCcEECHHHHHHHHHH
Confidence                1232222           33346799999999999998865432110       11112 3566899999999999


Q ss_pred             HcCCCCCCccccEEEeCCCcccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++++...++ |+.+.++++.+..
T Consensus       207 ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          207 IIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             HHHSTTTTT-TEEEEEECSSCCC
T ss_pred             HHcCccccc-CeeEEecCCCCCC
Confidence            998877655 8899998887654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.85  E-value=4.5e-20  Score=155.76  Aligned_cols=198  Identities=17%  Similarity=0.101  Sum_probs=146.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc--CC-----------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK--CF-----------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~--~~-----------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      |+||||||+|+||     ..+++.+.+.  +.                       ++.++.+|++|++++++++      
T Consensus         5 ~~vlVTGatG~iG-----~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------   73 (348)
T 1oc2_A            5 KNIIVTGGAGFIG-----SNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA------   73 (348)
T ss_dssp             SEEEEETTTSHHH-----HHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH------
T ss_pred             cEEEEeCCccHHH-----HHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHh------
Confidence            7899999999999     6666666554  32                       3456778999999888877      


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-----------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-----------  141 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-----------  141 (251)
                        .++|+|||+||... .    +.+.++++..+++|+.++..+++++.+.    + ++||++||.+.+.           
T Consensus        74 --~~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           74 --AKADAIVHYAAESH-N----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             --TTCSEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             --hcCCEEEECCcccC-c----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccc
Confidence              46799999999753 1    2234556789999999999999998664    3 4999999976432           


Q ss_pred             ------------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC----
Q 041276          142 ------------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP----  205 (251)
Q Consensus       142 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~----  205 (251)
                                  +......|+.+|.+.+.+++.++.++   |++++.+.||.+.+|..........+........+    
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  218 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY  218 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEE
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEe
Confidence                        22345689999999999999998874   79999999999999876421111222333322222    


Q ss_pred             -----CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 -----MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                           ...+..++|+|++++.++...   .+|+.+.+++|..++
T Consensus       219 ~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s  259 (348)
T 1oc2_A          219 GEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN  259 (348)
T ss_dssp             TTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE
T ss_pred             cCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCC
Confidence                 124567999999999998643   479999999986543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.84  E-value=5.2e-20  Score=153.12  Aligned_cols=199  Identities=16%  Similarity=0.162  Sum_probs=145.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCee------------------EEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKV------------------TGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~------------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++||||||+|+||     ..+++.+.+.|.++                  .++.+|++|++++++++++      .++|+
T Consensus         1 m~vlVTGatG~iG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~   69 (311)
T 2p5y_A            1 MRVLVTGGAGFIG-----SHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFRE------FRPTH   69 (311)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHH------HCCSE
T ss_pred             CEEEEEeCCcHHH-----HHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHh------cCCCE
Confidence            3699999999999     88888887665433                  3567899999999888764      27999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-------------CCCC
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-------------TNLG  146 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-------------~~~~  146 (251)
                      ++|+|+... .    ..+.+++...+++|+.+++.+++++.    +.+.++||++||.++..+             ..+.
T Consensus        70 vi~~a~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~  140 (311)
T 2p5y_A           70 VSHQAAQAS-V----KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK  140 (311)
T ss_dssp             EEECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred             EEECccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence            999999653 1    12345678899999999999999873    445579999999822211             1235


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCCC--------------CCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTP--------------MERP  209 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~--------------~~~~  209 (251)
                      ..|+.||++.+.+++.++.++   |++++.+.|+.+.+|........   ..+........+              ...+
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  217 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY  217 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence            689999999999999998874   79999999999999875432211   122232222222              1134


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          210 GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       210 ~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ..++|+|++++.++...     |+.+.+++|..++
T Consensus       218 i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s  247 (311)
T 2p5y_A          218 VYVGDVAEAHALALFSL-----EGIYNVGTGEGHT  247 (311)
T ss_dssp             EEHHHHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred             EEHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence            56899999999998642     8899999886543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.84  E-value=1.8e-20  Score=148.25  Aligned_cols=176  Identities=18%  Similarity=0.222  Sum_probs=138.7

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCe----------------eEEEeccCCC-HHHHHHHHHHHHHhcCCCccEEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFK----------------VTGSVCDASS-RAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~----------------~~~~~~D~~~-~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      +||||||+|+||     ..+++.+.+.|.+                +.++.+|++| ++++.+++        .++|+||
T Consensus         2 ~ilItGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~~~d~vi   68 (219)
T 3dqp_A            2 KIFIVGSTGRVG-----KSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQL--------HGMDAII   68 (219)
T ss_dssp             EEEEESTTSHHH-----HHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTT--------TTCSEEE
T ss_pred             eEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHH--------cCCCEEE
Confidence            699999999999     8888888776543                4567889999 88887776        5799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC-------ChhhHHhHH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL-------GTIYAATKG  154 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-------~~~Y~~sK~  154 (251)
                      |+||... .            ..+++|+.++..+++++    ++.+.++||++||..+..+.+.       ...|+.+|.
T Consensus        69 ~~ag~~~-~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~  131 (219)
T 3dqp_A           69 NVSGSGG-K------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKH  131 (219)
T ss_dssp             ECCCCTT-S------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHH
T ss_pred             ECCcCCC-C------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHHHHH
Confidence            9999764 1            15778999998888876    5566679999999988776655       679999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +.+.+++      ...|++++.++||++.++........         ......+.+++|+|+.++.++....  ..|+.
T Consensus       132 ~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~  194 (219)
T 3dqp_A          132 FADLYLT------KETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVMTDH--SIGKV  194 (219)
T ss_dssp             HHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHTCGG--GTTEE
T ss_pred             HHHHHHH------hccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHhCcc--ccCcE
Confidence            9998886      35799999999999998765332110         1234466789999999999997543  45999


Q ss_pred             EEeCCCc
Q 041276          235 ICVDGGF  241 (251)
Q Consensus       235 i~vdgG~  241 (251)
                      +.+++|.
T Consensus       195 ~~i~~g~  201 (219)
T 3dqp_A          195 ISMHNGK  201 (219)
T ss_dssp             EEEEECS
T ss_pred             EEeCCCC
Confidence            9996663

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.84  E-value=1.3e-20  Score=151.90  Aligned_cols=199  Identities=13%  Similarity=0.048  Sum_probs=139.5

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhc--CCee-----------------EEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTK--CFKV-----------------TGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~--~~~~-----------------~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +.+|+||||||+|+||     ..+++.+.+.  +.++                 .++.+|++|++++++++        .
T Consensus         2 ~~~~~ilVtGasG~iG-----~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTG-----QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF--------Q   68 (253)
T ss_dssp             CSCCEEEEESTTSHHH-----HHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHH--------T
T ss_pred             CCCCEEEEEcCCcHHH-----HHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHH--------c
Confidence            4579999999999999     7777777766  4333                 45678999999888887        4


Q ss_pred             CccEEEEcccCCCCCCC--------CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           76 KLNILINNVGTNYTTKP--------TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++|+|||+||.......        ..+...+.+++.+++|+.++..+++++    ++.+.++||++||..+..+.....
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~~~~~~~~  144 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLN  144 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGG
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHH----HHcCCCEEEEEcCccCCCCCCccc
Confidence            69999999997541110        112223445568899999998888876    344557999999988765544333


Q ss_pred             -----hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          148 -----IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       148 -----~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                           .|+.+|.+.+.+++.       .|++++.++||++.++.................  ...++.+++|+|+.++++
T Consensus       145 ~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dva~~~~~~  215 (253)
T 1xq6_A          145 KLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ--TDTKTVPRADVAEVCIQA  215 (253)
T ss_dssp             GGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG--SSCCEEEHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC--CCCcEEcHHHHHHHHHHH
Confidence                 366699999888752       689999999999999864321000000000011  123467899999999999


Q ss_pred             cCCCCCCccccEEEeCCCc
Q 041276          223 CMPAASYITGQTICVDGGF  241 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~  241 (251)
                      +....  .+|+.+.+++|.
T Consensus       216 ~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          216 LLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             TTCGG--GTTEEEEEEECC
T ss_pred             HcCcc--ccCCEEEecCCC
Confidence            96532  479999999863

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.84  E-value=2.3e-19  Score=140.16  Aligned_cols=180  Identities=15%  Similarity=0.128  Sum_probs=132.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +|+|+||||+|+||     ..+++.+.+.+.                  ++.++.+|++|++++.+++        .++|
T Consensus         3 ~~~ilVtGatG~iG-----~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTG-----LTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV--------AGQD   69 (206)
T ss_dssp             CCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHH--------TTCS
T ss_pred             CCEEEEEcCCcHHH-----HHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHH--------cCCC
Confidence            47999999999999     777777766543                  3456788999999888877        4699


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC----CChhhHHhHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN----LGTIYAATKG  154 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~----~~~~Y~~sK~  154 (251)
                      +|||++|.... .   +.        .++|+.++..+++++    ++.+.+++|++||...+...+    ....|+.+|.
T Consensus        70 ~vi~~a~~~~~-~---~~--------~~~n~~~~~~~~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           70 AVIVLLGTRND-L---SP--------TTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             EEEECCCCTTC-C---SC--------CCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEEECccCCCC-C---Cc--------cchHHHHHHHHHHHH----HHhCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            99999997642 1   11        136777777777665    444557999999987765544    5678999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcc-cCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFI-TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +++.+++       ..+++++.+.||.+ .++....+...      . ...|.+.+.+++|+|+.+++++...  ..+|+
T Consensus       134 ~~e~~~~-------~~~i~~~~lrp~~~~~~~~~~~~~~~------~-~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~  197 (206)
T 1hdo_A          134 RMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVT------L-DGRGPSRVISKHDLGHFMLRCLTTD--EYDGH  197 (206)
T ss_dssp             HHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEE------S-SSCSSCSEEEHHHHHHHHHHTTSCS--TTTTC
T ss_pred             HHHHHHH-------hCCCCEEEEeCCcccCCCCCcceEec------c-cCCCCCCccCHHHHHHHHHHHhcCc--ccccc
Confidence            9998874       26899999999998 44433222110      0 1122246778999999999999754  36899


Q ss_pred             EEEeCCCc
Q 041276          234 TICVDGGF  241 (251)
Q Consensus       234 ~i~vdgG~  241 (251)
                      .+.++||.
T Consensus       198 ~~~i~~g~  205 (206)
T 1hdo_A          198 STYPSHQY  205 (206)
T ss_dssp             EEEEECCC
T ss_pred             ceeeeccc
Confidence            99999985

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.84  E-value=3.6e-20  Score=155.90  Aligned_cols=203  Identities=14%  Similarity=0.046  Sum_probs=140.9

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF------------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      +++|+||||||+|+||     ..+++.+.+.|.                        ++.++.+|++|++++.++++.+ 
T Consensus         1 m~~~~vlVtGatG~iG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDG-----AYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-   74 (345)
T ss_dssp             --CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-
Confidence            3579999999999999     666666655442                        3556678999999999888764 


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc----------
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV----------  140 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~----------  140 (251)
                           ++|+|||+||... .    +.+.++++..+++|+.+++++++++.+. .  ..++||++||.+.+          
T Consensus        75 -----~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~vyg~~~~~~~~e  141 (345)
T 2z1m_A           75 -----QPDEVYNLAAQSF-V----GVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSEMFGKVQEIPQTE  141 (345)
T ss_dssp             -----CCSEEEECCCCCC-H----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             -----CCCEEEECCCCcc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechhhcCCCCCCCCCc
Confidence                 6999999999653 1    1223457889999999999999998742 1  13799999998643          


Q ss_pred             -cCCCCChhhHHhHHHHHHHHHHHHHHHc---cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC---------CCCC
Q 041276          141 -LSTNLGTIYAATKGAMNQLAKNLACEWA---RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR---------TPME  207 (251)
Q Consensus       141 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~  207 (251)
                       .+..+...|+.+|++.+.+++.++.+++   ..++.++.+.||...+.+...+   ..........         .+..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  218 (345)
T 2z1m_A          142 KTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI---TYSLARIKYGLQDKLVLGNLNAK  218 (345)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH---HHHHHHHHTTSCSCEEESCTTCE
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH---HHHHHHHHcCCCCeeeeCCCCce
Confidence             2334567899999999999999999875   3345667777887766542110   1111111111         0111


Q ss_pred             -CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          208 -RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       208 -~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                       .+..++|+|+++++++....    ++.+.+.+|..+
T Consensus       219 ~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  251 (345)
T 2z1m_A          219 RDWGYAPEYVEAMWLMMQQPE----PDDYVIATGETH  251 (345)
T ss_dssp             ECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCCE
T ss_pred             eeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCCc
Confidence             26789999999999996532    356777766543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.84  E-value=5.1e-20  Score=154.78  Aligned_cols=199  Identities=16%  Similarity=0.156  Sum_probs=144.8

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc---C---C------------------------eeEEEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK---C---F------------------------KVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~---~---~------------------------~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ++||||||+|+||     ..+++.+.+.   +   .                        ++.++.+|++|++++++++ 
T Consensus         1 M~vlVTGatG~iG-----~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIG-----SHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-   74 (337)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-
T ss_pred             CeEEEECCccHHH-----HHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-
Confidence            3699999999999     6666666653   3   2                        3456778999998888776 


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc------
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL------  141 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~------  141 (251)
                             .++|+|||+||... .    +.+.++++..+++|+.++.++++++.+.    +.++||++||.+.+.      
T Consensus        75 -------~~~d~Vih~A~~~~-~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~  138 (337)
T 1r6d_A           75 -------RGVDAIVHFAAESH-V----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGS  138 (337)
T ss_dssp             -------TTCCEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSC
T ss_pred             -------cCCCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCC
Confidence                   47999999999653 1    1233456788999999999999998553    447999999976542      


Q ss_pred             -----CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC---------C
Q 041276          142 -----STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM---------E  207 (251)
Q Consensus       142 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~  207 (251)
                           +..+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.+|..........+........+.         .
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (337)
T 1r6d_A          139 WTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR  215 (337)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeE
Confidence                 22345789999999999999998874   799999999999998753211112233333222211         1


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          208 RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+..++|+|++++.++...   .+|+.+.+++|..++
T Consensus       216 ~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  249 (337)
T 1r6d_A          216 EWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLELT  249 (337)
T ss_dssp             EEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             eeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCcc
Confidence            3456899999999998643   368999999987543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.84  E-value=3.9e-19  Score=151.94  Aligned_cols=206  Identities=14%  Similarity=0.090  Sum_probs=150.0

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------eEEEeccCCCHHHHHHHHHHHHHh
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK------------------VTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+...+|+||||||+|+||     ..+++.|.+.+.+                  +.++.+|++|++++.+++      
T Consensus        23 ~~~~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~------   91 (379)
T 2c5a_A           23 QYWPSENLKISITGAGGFIA-----SHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT------   91 (379)
T ss_dssp             CSCTTSCCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH------
T ss_pred             ccccccCCeEEEECCccHHH-----HHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh------
Confidence            34445678999999999999     7888887766543                  345678999999888877      


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-----------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-----------  141 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-----------  141 (251)
                        .++|+|||+||... ....   ..++++..+++|+.++..+++++.    +.+.++||++||...+.           
T Consensus        92 --~~~d~Vih~A~~~~-~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~~  161 (379)
T 2c5a_A           92 --EGVDHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNVS  161 (379)
T ss_dssp             --TTCSEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             --CCCCEEEECceecC-cccc---cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCCC
Confidence              47999999999753 1111   123467889999999999999873    44557999999976543           


Q ss_pred             -------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCC-----
Q 041276          142 -------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTP-----  205 (251)
Q Consensus       142 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~-----  205 (251)
                             +......|+.+|.+.+.+++.++.+.   |++++.+.||.+.+|.......    ...+........+     
T Consensus       162 ~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (379)
T 2c5a_A          162 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW  238 (379)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEE
T ss_pred             cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEe
Confidence                   22345689999999999999998763   7999999999999986543211    1233333322221     


Q ss_pred             -----CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 -----MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                           ...+..++|+|++++.++...    .|+.+.+.+|..++
T Consensus       239 g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s  278 (379)
T 2c5a_A          239 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  278 (379)
T ss_dssp             SCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred             CCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccC
Confidence                 123456999999999998643    47788998886543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=1.9e-19  Score=151.49  Aligned_cols=191  Identities=14%  Similarity=0.104  Sum_probs=139.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++||||||+|+||     ..+++.+.+.|.                  ++.++.+|++|++++.+++        .++|+
T Consensus        14 M~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~--------~~~d~   80 (342)
T 2x4g_A           14 VKYAVLGATGLLG-----HHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERAL--------RGLDG   80 (342)
T ss_dssp             CEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHT--------TTCSE
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHH--------cCCCE
Confidence            5899999999999     777777776543                  3456678999998888776        46999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC--------------
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL--------------  145 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--------------  145 (251)
                      |||+||...       ...++++..+++|+.++.++++++.+.    +.++||++||...+...+.              
T Consensus        81 vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           81 VIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEEC-------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            999999643       224567889999999999999998653    4579999999887655443              


Q ss_pred             --ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC-CCCCCCHHHHHHHhhCCCC----C--CCCCHHHHH
Q 041276          146 --GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT-EPYLSDEKFLEEVKCRTPM----E--RPGEPKEVS  216 (251)
Q Consensus       146 --~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~----~--~~~~~~dva  216 (251)
                        ...|+.+|.+.+.+++.++.   + |++++.+.||.+.++.. +..  ...+........+.    .  .+..++|+|
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  223 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAG  223 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHH
Confidence              67899999999999998876   3 89999999999999876 321  22333443333221    1  256899999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCCCc
Q 041276          217 SLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      ++++.++....   .|+.+.+++|.
T Consensus       224 ~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          224 RGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHSC---TTCEEEECCEE
T ss_pred             HHHHHHHhCCC---CCceEEEcCCc
Confidence            99999996443   28999999986

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.83  E-value=8.5e-20  Score=151.96  Aligned_cols=197  Identities=12%  Similarity=0.049  Sum_probs=145.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-----------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      |+||||||+|+||     ..+++.|.+.|.                 .+.++.+|+++ +++.+++        .++|+|
T Consensus         2 ~~vlVTGatG~iG-----~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~--------~~~d~v   67 (313)
T 3ehe_A            2 SLIVVTGGAGFIG-----SHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYL--------KGAEEV   67 (313)
T ss_dssp             -CEEEETTTSHHH-----HHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHH--------TTCSEE
T ss_pred             CEEEEECCCchHH-----HHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHh--------cCCCEE
Confidence            5799999999999     888888876652                 24456789988 7777766        479999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-----------CCCCChhh
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-----------STNLGTIY  149 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~Y  149 (251)
                      ||+|+...     ...+.++++..+++|+.++..+++++    ++.+.++||++||...+.           +..+...|
T Consensus        68 ih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  138 (313)
T 3ehe_A           68 WHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLY  138 (313)
T ss_dssp             EECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             EECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHH
Confidence            99999543     12334567889999999999998885    445567999999987653           33345789


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC-CC---------CCCCCCHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR-TP---------MERPGEPKEVSSLV  219 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~dva~~~  219 (251)
                      +.+|.+.+.+++.++.+   .|++++.+.|+.+.+|...... ...+....... .+         ...+..++|+|+++
T Consensus       139 ~~sK~~~e~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  214 (313)
T 3ehe_A          139 GASKLACEALIESYCHT---FDMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM  214 (313)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh---cCCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHH
Confidence            99999999999999987   4899999999999988654211 11222222221 11         11356689999999


Q ss_pred             HHHcCCCCCCccccEEEeCCCcccc
Q 041276          220 AFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +.++.   ....|+.+++.+|..++
T Consensus       215 ~~~~~---~~~~~~~~ni~~~~~~s  236 (313)
T 3ehe_A          215 LFGLR---GDERVNIFNIGSEDQIK  236 (313)
T ss_dssp             HHHTT---CCSSEEEEECCCSCCEE
T ss_pred             HHHhc---cCCCCceEEECCCCCee
Confidence            99996   33468899999886543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.83  E-value=6.3e-20  Score=154.85  Aligned_cols=208  Identities=13%  Similarity=0.063  Sum_probs=144.3

Q ss_pred             CCCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------EEeccCCCHHHHHHHHHHHHHhcCC
Q 041276            8 DRQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------GSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus         8 ~~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      +++++.++++|+||||||+|+||     ..+++.|.+.|.++.            ++.+|++|.+++.+++        .
T Consensus        10 ~~~~~~~~~~~~vlVtGatG~iG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~--------~   76 (347)
T 4id9_A           10 HSSGLVPRGSHMILVTGSAGRVG-----RAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAI--------M   76 (347)
T ss_dssp             -----------CEEEETTTSHHH-----HHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHH--------T
T ss_pred             CCCcccccCCCEEEEECCCChHH-----HHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHH--------h
Confidence            34567778899999999999999     888888888765544            4578999999988887        4


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-------------
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-------------  142 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-------------  142 (251)
                      ++|+|||+|+...       .+.+.++..+++|+.++..+++++    ++.+.++||++||...+..             
T Consensus        77 ~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~  145 (347)
T 4id9_A           77 GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVTEDHP  145 (347)
T ss_dssp             TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSC
T ss_pred             CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcCCCCC
Confidence            7999999999754       123345889999999999998887    4455679999999665432             


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCccc-------------CCCCCCCC--------CC---HHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFIT-------------TPLTEPYL--------SD---EKFLE  198 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~-------------t~~~~~~~--------~~---~~~~~  198 (251)
                      ......|+.+|.+.+.+++.++.+   .+++++.+.|+.+.             .|......        ..   ..+..
T Consensus       146 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
T 4id9_A          146 LCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQ  222 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHH
Confidence            234568999999999999998887   58999999999987             22211000        00   11222


Q ss_pred             HHhhCCC---------CCCC----CCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          199 EVKCRTP---------MERP----GEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       199 ~~~~~~~---------~~~~----~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ......+         ...+    ..++|+|++++.++....  ..|+.+.+.+|..++
T Consensus       223 ~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s  279 (347)
T 4id9_A          223 SRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD  279 (347)
T ss_dssp             HHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE
T ss_pred             HHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc
Confidence            2222222         1123    678999999999996543  358999999887554

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.83  E-value=3.3e-19  Score=151.01  Aligned_cols=208  Identities=13%  Similarity=0.020  Sum_probs=150.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-----------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .+++|+||||||+|+||     ..+++.|.+.|.                       ++.++.+|+++++++.++++.+ 
T Consensus         6 ~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKG-----GWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-
T ss_pred             hhCCCEEEEECCCchHH-----HHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-
Confidence            35789999999999999     777777765543                       3456778999999999888753 


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc---------
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL---------  141 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~---------  141 (251)
                           ++|+|||+||...     .+.+.++++..+++|+.++..+++++.+.   .+.++||++||...+.         
T Consensus        80 -----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~  146 (357)
T 1rkx_A           80 -----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYR  146 (357)
T ss_dssp             -----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBC
T ss_pred             -----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCC
Confidence                 6999999999632     12335667889999999999999998653   2257999999986432         


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHHc------cCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCC-----
Q 041276          142 ---STNLGTIYAATKGAMNQLAKNLACEWA------RDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPM-----  206 (251)
Q Consensus       142 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~------~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~-----  206 (251)
                         +..+...|+.+|.+.+.+++.++.++.      +.|++++.+.||.+.+|....... ...+........+.     
T Consensus       147 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~  226 (357)
T 1rkx_A          147 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNP  226 (357)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCT
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCC
Confidence               223456899999999999999999874      458999999999999986422100 12233333222211     


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCC--CCCccccEEEeCCC
Q 041276          207 ---ERPGEPKEVSSLVAFLCMPA--ASYITGQTICVDGG  240 (251)
Q Consensus       207 ---~~~~~~~dva~~~~~l~~~~--~~~~~G~~i~vdgG  240 (251)
                         ..+..++|+|++++.++...  .....|+.+.+.+|
T Consensus       227 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          227 HAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             TCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence               13457899999998887521  11235778888764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.83  E-value=3e-20  Score=154.54  Aligned_cols=199  Identities=13%  Similarity=0.097  Sum_probs=144.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------------EEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------------~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |+||||||+|+||     ..+++.|.+.|.++.                  ++.+|++|.+ +.+++        .. |+
T Consensus         1 m~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~--------~~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIG-----SHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGI--------KG-DV   65 (312)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTC--------CC-SE
T ss_pred             CEEEEECCCChHH-----HHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhc--------CC-CE
Confidence            5799999999999     888888887765543                  4567888876 54443        33 99


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChh
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTI  148 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~  148 (251)
                      |||+|+...     ...+.++++..+++|+.++.++++++    ++.+.++||++||...+..           ..+...
T Consensus        66 vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           66 VFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            999999643     12344557788999999999999987    3445579999999876532           234578


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC-CCC---------CCCCCHHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR-TPM---------ERPGEPKEVSSL  218 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~dva~~  218 (251)
                      |+.+|.+.+.+++.++.++   |++++.+.|+.+.+|...... ...+....... .+.         ..+..++|+|++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  212 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV-IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEA  212 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH-HHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh-HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHH
Confidence            9999999999999999885   899999999999998754311 12223322222 111         124459999999


Q ss_pred             HHHHcCC-CCCCccccEEEeCCCcccc
Q 041276          219 VAFLCMP-AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       219 ~~~l~~~-~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++.++.. ......|+.+.+.+|..++
T Consensus       213 ~~~~~~~~~~~~~~~~~~ni~~~~~~s  239 (312)
T 3ko8_A          213 TLAAWKKFEEMDAPFLALNVGNVDAVR  239 (312)
T ss_dssp             HHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred             HHHHHHhccccCCCCcEEEEcCCCcee
Confidence            9999864 1233578999999886544

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.83  E-value=1.1e-19  Score=154.32  Aligned_cols=199  Identities=15%  Similarity=0.084  Sum_probs=143.2

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHh--cCCee-------------------------------EEEeccCCCH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKT--KCFKV-------------------------------TGSVCDASSR   59 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~--~~~~~-------------------------------~~~~~D~~~~   59 (251)
                      +++++|+||||||+|+||     ..+++.|.+  .+.++                               .++.+|++|+
T Consensus         6 ~~~~~~~vlVTGatG~IG-----~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   80 (362)
T 3sxp_A            6 DELENQTILITGGAGFVG-----SNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP   80 (362)
T ss_dssp             CCCTTCEEEEETTTSHHH-----HHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH
T ss_pred             hhcCCCEEEEECCCCHHH-----HHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH
Confidence            467899999999999999     777777776  55433                               4567899999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           60 AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        60 ~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++++++      .. .++|+|||+||... .      +.++++..+++|+.++..+++++    ++.+ ++||++||...
T Consensus        81 ~~~~~~------~~-~~~D~vih~A~~~~-~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~v  141 (362)
T 3sxp_A           81 LDLRRL------EK-LHFDYLFHQAAVSD-T------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGV  141 (362)
T ss_dssp             HHHHHH------TT-SCCSEEEECCCCCG-G------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGG
T ss_pred             HHHHHh------hc-cCCCEEEECCccCC-c------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHH
Confidence            998887      12 68999999999643 1      33457889999999999999987    4444 56999999655


Q ss_pred             ccCC----------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCC
Q 041276          140 VLST----------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTP  205 (251)
Q Consensus       140 ~~~~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~  205 (251)
                      +...          .+...|+.+|.+.+.+++.++.+     +++..+.|+.+..|......    ....+........+
T Consensus       142 yg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  216 (362)
T 3sxp_A          142 YGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKE  216 (362)
T ss_dssp             GCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSE
T ss_pred             hCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCC
Confidence            4322          12346999999999999887765     66777888888776543210    01233333333222


Q ss_pred             CC---------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          206 ME---------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       206 ~~---------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ..         .+..++|+|++++.++....   +| .+.+.+|..++
T Consensus       217 ~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s  260 (362)
T 3sxp_A          217 VKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARS  260 (362)
T ss_dssp             EECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEE
T ss_pred             eEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCcc
Confidence            21         24459999999999997543   58 99999887654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.83  E-value=2.3e-19  Score=153.22  Aligned_cols=202  Identities=13%  Similarity=0.055  Sum_probs=145.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-C--------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC-F--------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+++|+||||||+|+||     ..+++.+.+.+ .                    ++.++.+|++|++++++++      
T Consensus        29 ~~~~~~ilVtGatG~iG-----~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~------   97 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVG-----SNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQ------   97 (377)
T ss_dssp             GGTTCEEEEETTTSHHH-----HHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCC------
T ss_pred             HhCCCEEEEECCccHHH-----HHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHh------
Confidence            47789999999999999     77777776655 3                    3456678999988777665      


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccccc----------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVL----------  141 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~----------  141 (251)
                        .++|+|||+||... .    ..+.++++..+++|+.++..+++++    ++. +.++||++||...+.          
T Consensus        98 --~~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~  166 (377)
T 2q1s_A           98 --DEYDYVFHLATYHG-N----QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKAT  166 (377)
T ss_dssp             --SCCSEEEECCCCSC-H----HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------
T ss_pred             --hCCCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCcc
Confidence              47999999999653 1    1233567889999999999999887    444 557999999976431          


Q ss_pred             ------CC-CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC---------CC----CCCCHHHHHHHh
Q 041276          142 ------ST-NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT---------EP----YLSDEKFLEEVK  201 (251)
Q Consensus       142 ------~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~---------~~----~~~~~~~~~~~~  201 (251)
                            +. .+...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++..         ..    ......+.....
T Consensus       167 E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (377)
T 2q1s_A          167 EETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL  243 (377)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred             cccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence                  22 345689999999999999998774   89999999999999865         21    001123333333


Q ss_pred             hCCCCC---------CCCCHHHHHHH-HHHHcCCCCCCccccEEEeCCCcccc
Q 041276          202 CRTPME---------RPGEPKEVSSL-VAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       202 ~~~~~~---------~~~~~~dva~~-~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ...+..         .+..++|+|++ ++.++....   +| .+.+.+|..++
T Consensus       244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s  292 (377)
T 2q1s_A          244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETS  292 (377)
T ss_dssp             TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEE
T ss_pred             cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCcee
Confidence            333322         23448999999 998886532   68 99999886543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.83  E-value=2.6e-19  Score=150.46  Aligned_cols=198  Identities=11%  Similarity=-0.007  Sum_probs=138.2

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      ....+++|+||||||+|+||     ..+++.+.+.|.                    ++.++.+|++|+++++++++.  
T Consensus        15 ~~~~~~~~~vlVTGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~--   87 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIG-----SHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD--   87 (333)
T ss_dssp             ------CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH--
T ss_pred             eeecCCCCEEEEeCCccHHH-----HHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc--
Confidence            34557889999999999999     777777765542                    345678899999999888864  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc----CC---
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL----ST---  143 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~----~~---  143 (251)
                          .++|+|||+||... ..     +.++++  +++|+.++..+++++.+    .+.++||++||.+.+.    ..   
T Consensus        88 ----~~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~  151 (333)
T 2q1w_A           88 ----LQPDAVVHTAASYK-DP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVR  151 (333)
T ss_dssp             ----HCCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBC
T ss_pred             ----cCCcEEEECceecC-CC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCC
Confidence                37999999999764 21     223444  99999999999999854    4557999999987654    21   


Q ss_pred             -----CCC-hhhHHhHHHHHHHHHH-HHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC------CCCCCCC
Q 041276          144 -----NLG-TIYAATKGAMNQLAKN-LACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR------TPMERPG  210 (251)
Q Consensus       144 -----~~~-~~Y~~sK~a~~~~~~~-la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~  210 (251)
                           .+. ..|+.+|++.+.+++. ++        ++..+.|+.+..|.... ...+.+.......      .+...+.
T Consensus       152 ~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  222 (333)
T 2q1w_A          152 LDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVS-GPLPIFFQRLSEGKKCFVTKARRDFV  222 (333)
T ss_dssp             TTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCS-SHHHHHHHHHHTTCCCEEEECEECEE
T ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcC-cHHHHHHHHHHcCCeeeCCCceEeeE
Confidence                 234 7899999999999987 54        45677888777665210 0012222222211      1123456


Q ss_pred             CHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          211 EPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .++|+|+++++++....    |+.+.+++|..++
T Consensus       223 ~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~s  252 (333)
T 2q1w_A          223 FVKDLARATVRAVDGVG----HGAYHFSSGTDVA  252 (333)
T ss_dssp             EHHHHHHHHHHHHTTCC----CEEEECSCSCCEE
T ss_pred             EHHHHHHHHHHHHhcCC----CCEEEeCCCCCcc
Confidence            79999999999997543    8999999987654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.83  E-value=2.4e-19  Score=151.45  Aligned_cols=206  Identities=13%  Similarity=0.019  Sum_probs=151.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------------CeeEEEeccCCCHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------------FKVTGSVCDASSRAERE   63 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~D~~~~~~~~   63 (251)
                      +.+.+|+||||||+|+||     ..+++.|.+.|                             .++.++.+|++|++++.
T Consensus        21 ~~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   95 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIG-----SNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCE   95 (351)
T ss_dssp             HHHSCCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHH
T ss_pred             CCCCCCeEEEECCCcHHH-----HHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHH
Confidence            346789999999999999     66666665543                             34567788999998888


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           64 KLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      +++        .++|+|||+||....     ....++....+++|+.++..+++++    ++.+.+++|++||...+...
T Consensus        96 ~~~--------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~  158 (351)
T 3ruf_A           96 QVM--------KGVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDH  158 (351)
T ss_dssp             HHT--------TTCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTC
T ss_pred             HHh--------cCCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCC
Confidence            777        479999999996531     2234556788999999999999887    44555799999998766433


Q ss_pred             C-----------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCCCC-
Q 041276          144 N-----------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPME-  207 (251)
Q Consensus       144 ~-----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-  207 (251)
                      +           +...|+.+|.+.+.+++.++.+.   |++++.+.|+.+.+|.......    ...+........+.. 
T Consensus       159 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (351)
T 3ruf_A          159 PALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYI  235 (351)
T ss_dssp             CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred             CCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEE
Confidence            2           24689999999999999998874   7999999999998886543211    123333333333221 


Q ss_pred             --------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          208 --------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       208 --------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                              .+..++|+|++++.++... ....|+.+.+.+|..++
T Consensus       236 ~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s  279 (351)
T 3ruf_A          236 NGDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTT  279 (351)
T ss_dssp             ESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCccc
Confidence                    2456899999999888642 34579999999887544

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.82  E-value=8.5e-20  Score=154.74  Aligned_cols=206  Identities=12%  Similarity=0.101  Sum_probs=143.7

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEe-----------------ccCCCHHHHHHHHHHHHHhc
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSV-----------------CDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +..+++|+||||||+|+||     ..+++.|.+.| .++..+.                 +|+++.+.++++++.  ..+
T Consensus        41 ~~~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIG-----SNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             -------CEEEETTTSHHH-----HHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTT--CCC
T ss_pred             cccCCCCEEEEECCCcHHH-----HHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhh--ccc
Confidence            4456789999999999999     88888888877 5655442                 466667777666642  123


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC---------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN---------  144 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~---------  144 (251)
                       +++|+|||+||....       +.++++..+++|+.++..+++++.+    .+. +||++||...+...+         
T Consensus       114 -~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          114 -GDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             -SSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             -CCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence             589999999997642       1234678899999999999998855    344 899999987654332         


Q ss_pred             --CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC---C-CHHHHHHHhhCCC----------CCC
Q 041276          145 --LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL---S-DEKFLEEVKCRTP----------MER  208 (251)
Q Consensus       145 --~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~---~-~~~~~~~~~~~~~----------~~~  208 (251)
                        +...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.+|......   . ...+........+          ...
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence              2568999999999999988765   5899999999999988643210   0 1222233322221          123


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          209 PGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       209 ~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      +..++|+|++++.++....    |+.+.+.+|..++
T Consensus       258 ~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s  289 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV----SGIFNLGTGRAES  289 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSCCEE
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEecCCCccc
Confidence            4678999999999986433    8899999886543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.81  E-value=5.4e-20  Score=186.35  Aligned_cols=158  Identities=16%  Similarity=0.174  Sum_probs=123.0

Q ss_pred             CCCEEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           16 QGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        16 ~~k~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+|++|||||++|||                       +.+...+..+++...+.++.++.+|++|.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            689999999999999                       11223455666666677899999999999999999999874 


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|+||||||+.. ..++.+.+.++|++.+++|+.+++++.+.+.+.|.+.  |+||++||.++..+.++...|+++
T Consensus      1962 ~-g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 L-GPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             H-SCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             c-CCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHH
Confidence            6 89999999999876 6778899999999999999999999999999988765  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFI  182 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v  182 (251)
                      |+++.+|++..+.+    |+...++..|.+
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            99999999987665    777777776654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.81  E-value=3.7e-19  Score=154.45  Aligned_cols=199  Identities=13%  Similarity=0.011  Sum_probs=137.6

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc------------------------------------CCeeEEEecc
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTK------------------------------------CFKVTGSVCD   55 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~D   55 (251)
                      +....+|+||||||+|+||     ..+++.+.+.                                    ..++.++.+|
T Consensus        64 ~~~~~~~~vlVTGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~D  138 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLG-----AYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGD  138 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHH-----HHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEC
T ss_pred             CCCCCCCEEEEecCCcHHH-----HHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCC
Confidence            3456678999999999999     3333333222                                    2356677778


Q ss_pred             CCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEec
Q 041276           56 ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVS  135 (251)
Q Consensus        56 ~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vs  135 (251)
                      +++++++.        .+ +++|+||||||...        ..+.++..+++|+.++.++++++.+     +..+||++|
T Consensus       139 l~d~~~l~--------~~-~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~S  196 (427)
T 4f6c_A          139 FECMDDVV--------LP-ENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVS  196 (427)
T ss_dssp             C---CCCC--------CS-SCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred             CCCcccCC--------Cc-CCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEEC
Confidence            87776666        23 68999999999763        1246788999999999999999865     347999999


Q ss_pred             ccccc------------------cCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----
Q 041276          136 SVCGV------------------LSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----  193 (251)
Q Consensus       136 s~~~~------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----  193 (251)
                      |...-                  .+......|+.+|.+.+.+++.++.    .|++++.+.||.+.++........    
T Consensus       197 S~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~  272 (427)
T 4f6c_A          197 TISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKT  272 (427)
T ss_dssp             EGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGG
T ss_pred             chHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcch
Confidence            98770                  0122567899999999999988753    689999999999998876543211    


Q ss_pred             ---HHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          194 ---EKFLEEVKCRTPM--------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       194 ---~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                         ..+........+.        ..+..++|+|++++.++....   .|+++.+++|..++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s  331 (427)
T 4f6c_A          273 NRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP  331 (427)
T ss_dssp             CHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEE
T ss_pred             HHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCc
Confidence               1223333222211        135678999999999997544   79999999987654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.81  E-value=1.3e-19  Score=152.35  Aligned_cols=199  Identities=13%  Similarity=0.104  Sum_probs=133.0

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe--------------------------eEEEeccCCCHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFK--------------------------VTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~--------------------------~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +++|+||||||+|+||     ..+++.|.+.|.+                          +.++.+|++|++++++++  
T Consensus         3 ~~~~~vlVTGatGfIG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--   75 (337)
T 2c29_D            3 SQSETVCVTGASGFIG-----SWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI--   75 (337)
T ss_dssp             ---CEEEETTTTSHHH-----HHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH--
T ss_pred             CCCCEEEEECCchHHH-----HHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH--
Confidence            4679999999999999     5555555544433                          445667888777776665  


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC----
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN----  144 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~----  144 (251)
                            .++|+|||+|+...    ....+  ..+..+++|+.++.++++++.+..   ..++||++||.++..+.+    
T Consensus        76 ------~~~d~Vih~A~~~~----~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~  140 (337)
T 2c29_D           76 ------KGCTGVFHVATPMD----FESKD--PENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLP  140 (337)
T ss_dssp             ------TTCSEEEECCCCCC----SSCSS--HHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCS
T ss_pred             ------cCCCEEEEeccccC----CCCCC--hHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCc
Confidence                  46899999998542    11122  235689999999999999986542   247999999987543211    


Q ss_pred             ------------------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHH---Hhh-
Q 041276          145 ------------------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE---VKC-  202 (251)
Q Consensus       145 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~---~~~-  202 (251)
                                        ....|+.||.+.+.+++.++.+   +|++++.++|+.+.+|....... ......   ... 
T Consensus       141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~  216 (337)
T 2c29_D          141 VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMP-PSLITALSPITGN  216 (337)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHTC
T ss_pred             ccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCC
Confidence                              2336999999999998877654   48999999999999997544322 111111   000 


Q ss_pred             -----CCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          203 -----RTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       203 -----~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                           ..+..++..++|+|+++++++...  ..+|..+..+++.
T Consensus       217 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~~  258 (337)
T 2c29_D          217 EAHYSIIRQGQFVHLDDLCNAHIYLFENP--KAEGRYICSSHDC  258 (337)
T ss_dssp             GGGHHHHTEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECCEEE
T ss_pred             CccccccCCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeCCCC
Confidence                 011234778999999999998542  3356554444443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.80  E-value=3.3e-18  Score=147.10  Aligned_cols=204  Identities=11%  Similarity=0.058  Sum_probs=141.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-----------------------------------------CCeeEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK-----------------------------------------CFKVTGS   52 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~   52 (251)
                      ...+++||||||+|.||     ..+++.|.+.                                         +.++.++
T Consensus         8 ~~~~~~vlVTG~tGfIG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~   82 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCG-----WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELY   82 (404)
T ss_dssp             ----CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEE
T ss_pred             ccCCCeEEEeCCCcHHH-----HHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEE
Confidence            45679999999999999     3333333222                                         2356678


Q ss_pred             eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceE
Q 041276           53 VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNI  131 (251)
Q Consensus        53 ~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~i  131 (251)
                      .+|+++++++.++++.+      ++|+|||+||... .. ....+++.+...+++|+.++..+++++.+.    +. .+|
T Consensus        83 ~~Dl~d~~~~~~~~~~~------~~D~Vih~A~~~~-~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~  150 (404)
T 1i24_A           83 VGDICDFEFLAESFKSF------EPDSVVHFGEQRS-AP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHL  150 (404)
T ss_dssp             ESCTTSHHHHHHHHHHH------CCSEEEECCSCCC-HH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEE
T ss_pred             ECCCCCHHHHHHHHhcc------CCCEEEECCCCCC-cc-chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEE
Confidence            89999999998888653      6999999999753 11 123367778889999999999999988543    33 499


Q ss_pred             EEeccccccc------------------------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCC
Q 041276          132 ILVSSVCGVL------------------------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLT  187 (251)
Q Consensus       132 v~vss~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~  187 (251)
                      |++||.+.+.                        +..+...|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       151 V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          151 VKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             EEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             EEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            9999976542                        22335689999999999999998875   89999999999999865


Q ss_pred             CCC-----------------CCCHHHHHHHhhCCCC---------CCCCCHHHHHHHHHHHcCCCCCCccc--cEEEeCC
Q 041276          188 EPY-----------------LSDEKFLEEVKCRTPM---------ERPGEPKEVSSLVAFLCMPAASYITG--QTICVDG  239 (251)
Q Consensus       188 ~~~-----------------~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G--~~i~vdg  239 (251)
                      ...                 .....+........+.         ..+..++|+|++++.++....  ..|  +.+.+.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          228 DETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             TTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             CccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence            320                 0012333333322221         123468999999999885432  235  6777754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.80  E-value=7.7e-19  Score=146.23  Aligned_cols=198  Identities=13%  Similarity=0.131  Sum_probs=122.9

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe----------ccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV----------CDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~----------~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      +|+||||||+|+||     ..+++.+.+.|.++..+.          +|+++++++.++++..      ++|+|||+||.
T Consensus         2 ~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~------~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLG-----RAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDF------QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEC------------------CHHHHHHH------CCSEEEECC--
T ss_pred             CCeEEEECCCcHHH-----HHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhh------CCCEEEECCcc
Confidence            58999999999999     899999988887776543          8999988888887653      69999999997


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC----------CCCChhhHHhHHHH
Q 041276           87 NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS----------TNLGTIYAATKGAM  156 (251)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~----------~~~~~~Y~~sK~a~  156 (251)
                      .. .    ..+.++++..+++|+.++..+++++.+    .+ +++|++||...+.+          ..+...|+.+|.+.
T Consensus        71 ~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~  140 (315)
T 2ydy_A           71 RR-P----DVVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDG  140 (315)
T ss_dssp             ----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cC-h----hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence            54 1    224567888999999999999999865    23 59999999887654          34467899999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCC---CCCCCHHHHHHHh-hC-------CCCCCCCCHHHHHHHHHHHcCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTE---PYLSDEKFLEEVK-CR-------TPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~---~~~~~~~~~~~~~-~~-------~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      +.+++.++.+       +..+.|+.+..+...   .+.  ..+..... ..       .+...+..++|+|++++.++..
T Consensus       141 e~~~~~~~~~-------~~~lR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          141 EKAVLENNLG-------AAVLRIPILYGEVEKLEESAV--TVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHCTT-------CEEEEECSEECSCSSGGGSTT--GGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCC-------eEEEeeeeeeCCCCcccccHH--HHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence            9999887432       245566665544332   111  12222222 11       1233567899999999999864


Q ss_pred             C-CCCccccEEEeCCCcccc
Q 041276          226 A-ASYITGQTICVDGGFTVN  244 (251)
Q Consensus       226 ~-~~~~~G~~i~vdgG~~~~  244 (251)
                      . .....|+.+.+.+|..++
T Consensus       212 ~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          212 RMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             HHTCTTCCEEEECCCSCCBC
T ss_pred             hccccCCCCeEEEcCCCccc
Confidence            2 123468899999987654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.80  E-value=1e-18  Score=145.84  Aligned_cols=195  Identities=16%  Similarity=0.074  Sum_probs=128.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee---------------------------EEEeccCCCHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKV---------------------------TGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~---------------------------~~~~~D~~~~~~~~~~~~~i   69 (251)
                      ||+||||||+|+||     ..+++.|.+.|.++                           .++.+|++|++++++++   
T Consensus         1 ~k~vlVTGatG~iG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---   72 (322)
T 2p4h_X            1 KGRVCVTGGTGFLG-----SWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI---   72 (322)
T ss_dssp             CCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH---
T ss_pred             CCEEEEECChhHHH-----HHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH---
Confidence            58999999999999     66666666555433                           34456777777777666   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC----
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL----  145 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~----  145 (251)
                           .++|+|||+|+...    .  ...+.+++.+++|+.+++++++++.+.   .+.++||++||.++..+.+.    
T Consensus        73 -----~~~d~vih~A~~~~----~--~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~  138 (322)
T 2p4h_X           73 -----EGCVGIFHTASPID----F--AVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDV  138 (322)
T ss_dssp             -----TTCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSE
T ss_pred             -----cCCCEEEEcCCccc----C--CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCee
Confidence                 46899999996321    1  111224568999999999999987443   14579999999875432211    


Q ss_pred             -----------------C-hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH--HHHHHHhhC--
Q 041276          146 -----------------G-TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE--KFLEEVKCR--  203 (251)
Q Consensus       146 -----------------~-~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~~--  203 (251)
                                       . ..|+.||.+.+.+++.++.+   +|++++.++|+.+.+|+........  .........  
T Consensus       139 ~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~  215 (322)
T 2p4h_X          139 LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKE  215 (322)
T ss_dssp             ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGG
T ss_pred             cCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCc
Confidence                             1 16999999877777665543   6899999999999999765432211  010111111  


Q ss_pred             -CCCC--CCCCHHHHHHHHHHHcCCCCCCccccEEEeCC
Q 041276          204 -TPME--RPGEPKEVSSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       204 -~~~~--~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                       .+..  .+..++|+|+++++++...  ..+|+.+ +.+
T Consensus       216 ~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~~~-~~~  251 (322)
T 2p4h_X          216 QIGVTRFHMVHVDDVARAHIYLLENS--VPGGRYN-CSP  251 (322)
T ss_dssp             GCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEEEE-CCC
T ss_pred             cCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCCEE-EcC
Confidence             1111  3678999999999998542  2567743 443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.80  E-value=4.5e-19  Score=146.11  Aligned_cols=195  Identities=17%  Similarity=0.155  Sum_probs=144.2

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      -..++||||||+|+||     ..+++.|.+.|.++..+   .+|++|++++.++++.+      ++|+|||+||... . 
T Consensus        10 ~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~------~~d~vih~A~~~~-~-   76 (292)
T 1vl0_A           10 HHHMKILITGANGQLG-----REIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK------KPNVVINCAAHTA-V-   76 (292)
T ss_dssp             --CEEEEEESTTSHHH-----HHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH------CCSEEEECCCCCC-H-
T ss_pred             cccceEEEECCCChHH-----HHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhc------CCCEEEECCccCC-H-
Confidence            3468999999999999     89999999888777766   47999999998888653      6999999999653 1 


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-----------CChhhHHhHHHHHHHH
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-----------LGTIYAATKGAMNQLA  160 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----------~~~~Y~~sK~a~~~~~  160 (251)
                         +...++++..+++|+.++..+++++.+    .+ .+||++||.+.+.+..           +...|+.+|.+.+.++
T Consensus        77 ---~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  148 (292)
T 1vl0_A           77 ---DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  148 (292)
T ss_dssp             ---HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ---HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence               223466788999999999999999855    34 3999999987654332           3568999999999999


Q ss_pred             HHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC-------CCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          161 KNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP-------MERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       161 ~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +.++.       .+..+.|+.+.++ ...+  ...+........+       ...+..++|+|+++++++...    +|+
T Consensus       149 ~~~~~-------~~~~lR~~~v~G~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~~  214 (292)
T 1vl0_A          149 KALNP-------KYYIVRTAWLYGD-GNNF--VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK----NYG  214 (292)
T ss_dssp             HHHCS-------SEEEEEECSEESS-SSCH--HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT----CCE
T ss_pred             HhhCC-------CeEEEeeeeeeCC-CcCh--HHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC----CCc
Confidence            87643       3677888888876 2221  1222222222221       134567999999999999653    688


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .+.+.+|..++
T Consensus       215 ~~~i~~~~~~s  225 (292)
T 1vl0_A          215 TFHCTCKGICS  225 (292)
T ss_dssp             EEECCCBSCEE
T ss_pred             EEEecCCCCcc
Confidence            99999986543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.79  E-value=2e-18  Score=140.52  Aligned_cols=177  Identities=16%  Similarity=0.143  Sum_probs=131.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe---------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK---------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNILIN   82 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~---------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~   82 (251)
                      |+||||||+|+||     ..+++.+.+.+.+               +.++.+|++|++++.+++        .++|+|||
T Consensus         3 ~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~d~vi~   69 (267)
T 3ay3_A            3 NRLLVTGAAGGVG-----SAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLV--------KDCDGIIH   69 (267)
T ss_dssp             EEEEEESTTSHHH-----HHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHH--------TTCSEEEE
T ss_pred             ceEEEECCCCHHH-----HHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHH--------cCCCEEEE
Confidence            6899999999999     7777777665432               356679999999888877        46999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC------------CChhhH
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN------------LGTIYA  150 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~------------~~~~Y~  150 (251)
                      +||...         .+.++..+++|+.++..+++++.    +.+.++||++||...+...+            +...|+
T Consensus        70 ~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~  136 (267)
T 3ay3_A           70 LGGVSV---------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYG  136 (267)
T ss_dssp             CCSCCS---------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHH
T ss_pred             CCcCCC---------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHH
Confidence            999752         12357889999999999999874    34557999999987664432            347899


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcc-cCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFI-TTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      .+|++.+.+++.++.   ++|++++.++||.+ .++.      .....         ..+.+++|+|+.++.++..... 
T Consensus       137 ~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~------~~~~~---------~~~~~~~dva~~~~~~~~~~~~-  197 (267)
T 3ay3_A          137 LSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPK------DARMM---------ATWLSVDDFMRLMKRAFVAPKL-  197 (267)
T ss_dssp             HHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCC------SHHHH---------HHBCCHHHHHHHHHHHHHSSCC-
T ss_pred             HHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCC------CCCee---------eccccHHHHHHHHHHHHhCCCC-
Confidence            999999999998865   46899999999997 3332      11111         1245799999999998864321 


Q ss_pred             ccccEEEeCCC
Q 041276          230 ITGQTICVDGG  240 (251)
Q Consensus       230 ~~G~~i~vdgG  240 (251)
                       .+..+.+.++
T Consensus       198 -~~~~~~~~~~  207 (267)
T 3ay3_A          198 -GCTVVYGASA  207 (267)
T ss_dssp             -CEEEEEECCS
T ss_pred             -CceeEecCCC
Confidence             2344555444

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.79  E-value=1.7e-18  Score=143.74  Aligned_cols=208  Identities=14%  Similarity=0.090  Sum_probs=147.6

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC----e---eEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF----K---VTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .+++|+||||||+|+||     ..+++.|.+.+.    .   +.++.+|++|++++.++++.      .++|+|||+|+.
T Consensus         3 ~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d~Vih~A~~   71 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVG-----KAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEK------VQPTHVIHLAAM   71 (319)
T ss_dssp             CCCCCEEEEETCSSHHH-----HHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHH------SCCSEEEECCCC
T ss_pred             cccCCeEEEECCCcHHH-----HHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhh------cCCCEEEECcee
Confidence            46789999999999999     888888887653    2   22337899999999988864      379999999997


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----------------CCChhhH
Q 041276           87 NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----------------NLGTIYA  150 (251)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----------------~~~~~Y~  150 (251)
                      .. ..   ..+.++....+++|+.++..+++++    ++.+..++|++||...+...                +....|+
T Consensus        72 ~~-~~---~~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~  143 (319)
T 4b8w_A           72 VG-GL---FRNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYS  143 (319)
T ss_dssp             CC-CH---HHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHH
T ss_pred             cc-cc---cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHH
Confidence            43 11   1112334677999999999988886    45555799999998654321                1122599


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----HHHHHH----HhhCCCCC---------CCCCHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----EKFLEE----VKCRTPME---------RPGEPK  213 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~~~----~~~~~~~~---------~~~~~~  213 (251)
                      .+|.+.+.+++.++.+   .|+++..+.|+.+.+|........    +.+...    .....+..         .+..++
T Consensus       144 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (319)
T 4b8w_A          144 YAKRMIDVQNRAYFQQ---YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL  220 (319)
T ss_dssp             HHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHH
T ss_pred             HHHHHHHHHHHHHHHh---hCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHH
Confidence            9999999999998877   379999999999988865432111    222333    22222211         235789


Q ss_pred             HHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          214 EVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       214 dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+|++++.++..... ..|+.+.+.+|..++
T Consensus       221 Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~s  250 (319)
T 4b8w_A          221 DLAQLFIWVLREYNE-VEPIILSVGEEDEVS  250 (319)
T ss_dssp             HHHHHHHHHHHHCCC-SSCEEECCCGGGCEE
T ss_pred             HHHHHHHHHHhcccc-CCceEEEecCCCcee
Confidence            999999999864322 457788888776543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.79  E-value=1.3e-18  Score=148.18  Aligned_cols=208  Identities=13%  Similarity=0.115  Sum_probs=146.6

Q ss_pred             CCcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CC-------------------eeEEEeccCC-CHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTK-CF-------------------KVTGSVCDAS-SRAEREKLMK   67 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~-------------------~~~~~~~D~~-~~~~~~~~~~   67 (251)
                      +..+..+.+|+||||||+|.||     ..+++.|.+. +.                   ++.++.+|++ +.+.+.++++
T Consensus        16 ~~~~~~m~~~~vlVtGatG~iG-----~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           16 TQGPGSMKAKKVLILGVNGFIG-----HHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             -------CCCEEEEESCSSHHH-----HHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH
T ss_pred             hcCCcccCCCEEEEECCCChHH-----HHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc
Confidence            3445667889999999999999     7777777655 42                   4567788999 9999888874


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----  143 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----  143 (251)
                              ++|+|||+|+.... .    ...++....+++|+.++..+++++    ++.+ .++|++||...+...    
T Consensus        91 --------~~d~Vih~A~~~~~-~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~-~~~v~~SS~~vyg~~~~~~  152 (372)
T 3slg_A           91 --------KCDVILPLVAIATP-A----TYVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCADEQ  152 (372)
T ss_dssp             --------HCSEEEECBCCCCH-H----HHHHCHHHHHHHHTTTTHHHHHHH----HHHT-CEEEEECCGGGGBSCCCSS
T ss_pred             --------cCCEEEEcCccccH-H----HHhhCHHHHHHHHHHHHHHHHHHH----HHhC-CcEEEeCcHHHhCCCCCCC
Confidence                    59999999997641 1    123455678899999999888887    3444 799999997554321    


Q ss_pred             --------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-----C---HHHHHHHh
Q 041276          144 --------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-----D---EKFLEEVK  201 (251)
Q Consensus       144 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-----~---~~~~~~~~  201 (251)
                                    .+...|+.+|.+.+.+++.++.+    |+++..+.|+.+.+|.......     .   ..+.....
T Consensus       153 ~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  228 (372)
T 3slg_A          153 FDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIV  228 (372)
T ss_dssp             BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHH
T ss_pred             CCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHH
Confidence                          22347999999999999888765    8999999999998886543111     1   22333333


Q ss_pred             hCCCCC---------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCC-Cccc
Q 041276          202 CRTPME---------RPGEPKEVSSLVAFLCMPAASYITGQTICVDG-GFTV  243 (251)
Q Consensus       202 ~~~~~~---------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdg-G~~~  243 (251)
                      ...+..         .+..++|+|++++.++........|+.+.+.+ |..+
T Consensus       229 ~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~  280 (372)
T 3slg_A          229 RGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNF  280 (372)
T ss_dssp             HTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred             cCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence            332221         34578999999999997654446799999998 5443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.79  E-value=7.4e-18  Score=142.10  Aligned_cols=205  Identities=13%  Similarity=0.054  Sum_probs=142.0

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC-------------------------------CeeEEEeccCCCHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC-------------------------------FKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~D~~~~~~~~~~   65 (251)
                      +|+||||||+|+||     ..+++.+.+.|                               .++.++.+|++|+++++++
T Consensus         2 ~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   76 (348)
T 1ek6_A            2 AEKVLVTGGAGYIG-----SHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRL   76 (348)
T ss_dssp             CSEEEEETTTSHHH-----HHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHH
Confidence            48999999999999     55555554433                               2456678899999998888


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---  142 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---  142 (251)
                      ++.      .++|+|||+||... ..    .+.++++..+++|+.++..+++++    ++.+.++||++||...+..   
T Consensus        77 ~~~------~~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~  141 (348)
T 1ek6_A           77 FKK------YSFMAVIHFAGLKA-VG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQY  141 (348)
T ss_dssp             HHH------CCEEEEEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSS
T ss_pred             HHh------cCCCEEEECCCCcC-cc----chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCC
Confidence            764      27999999999653 11    134567789999999999998875    5555679999999876532   


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CC--HHHHHHHh-h
Q 041276          143 ---------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SD--EKFLEEVK-C  202 (251)
Q Consensus       143 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~--~~~~~~~~-~  202 (251)
                               .+....|+.+|++.+.+++.++.+  ..++++..+.|+.+..|......        ..  +.+..... .
T Consensus       142 ~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1ek6_A          142 LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGR  219 (348)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTS
T ss_pred             CCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhc
Confidence                     122678999999999999999887  34699999999988776321110        11  11222222 1


Q ss_pred             CCC-----------C----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          203 RTP-----------M----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       203 ~~~-----------~----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      ..+           .    ..+..++|+|++++.++........++.+.+.+|..+
T Consensus       220 ~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          220 REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             CCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence            111           1    1345689999999988853221222488999887654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.78  E-value=5e-19  Score=140.56  Aligned_cols=185  Identities=10%  Similarity=0.024  Sum_probs=135.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-----------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      |+||||||+|+||     ..+++.+.+.+.                 .+.++.+|++|++++.+++        .++|+|
T Consensus         5 ~~ilItGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~d~v   71 (227)
T 3dhn_A            5 KKIVLIGASGFVG-----SALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVC--------KGADAV   71 (227)
T ss_dssp             CEEEEETCCHHHH-----HHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHH--------TTCSEE
T ss_pred             CEEEEEcCCchHH-----HHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHh--------cCCCEE
Confidence            7899999999999     888888876653                 3456678999999998887        469999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC----------CChhhH
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN----------LGTIYA  150 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~----------~~~~Y~  150 (251)
                      ||+||... ..          ...+++|+.++..+++++    ++.+.+++|++||.....+.+          ....|+
T Consensus        72 i~~a~~~~-~~----------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~  136 (227)
T 3dhn_A           72 ISAFNPGW-NN----------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILP  136 (227)
T ss_dssp             EECCCC-----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHH
T ss_pred             EEeCcCCC-CC----------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHH
Confidence            99998642 11          125778999988888776    555567999999987665432          357899


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC-----CCCCCCHHHHHHHHHHHcCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP-----MERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~  225 (251)
                      .+|.+.+.+++.++.   ..|++++.++||.+.++......-.      .....+     ...+..++|+|++++.++..
T Consensus       137 ~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~  207 (227)
T 3dhn_A          137 GVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYR------LGKDDMIVDIVGNSHISVEDYAAAMIDELEH  207 (227)
T ss_dssp             HHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCE------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCcccccee------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhC
Confidence            999999998887765   3689999999999987754321100      000001     12346799999999999964


Q ss_pred             CCCCccccEEEeCCCc
Q 041276          226 AASYITGQTICVDGGF  241 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~  241 (251)
                      ..  ..|+.+.+.+.-
T Consensus       208 ~~--~~g~~~~~~~~~  221 (227)
T 3dhn_A          208 PK--HHQERFTIGYLE  221 (227)
T ss_dssp             CC--CCSEEEEEECCS
T ss_pred             cc--ccCcEEEEEeeh
Confidence            43  579999887754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.78  E-value=7.6e-18  Score=140.06  Aligned_cols=195  Identities=13%  Similarity=0.091  Sum_probs=143.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE---------------EEeccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVT---------------GSVCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~---------------~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      +|+||||||+|.||     ..+++.+.+.+.++.               ++.+|++ .+++.+++        .++|+||
T Consensus         2 ~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~--------~~~d~Vi   67 (311)
T 3m2p_A            2 SLKIAVTGGTGFLG-----QYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQL--------NDVDAVV   67 (311)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHT--------TTCSEEE
T ss_pred             CCEEEEECCCcHHH-----HHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhh--------cCCCEEE
Confidence            37899999999999     888888887765443               4568888 87777766        4799999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYA  150 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~  150 (251)
                      |+|+.....         +....+++|+.++..+++++    ++.+..++|++||...+...           .+...|+
T Consensus        68 h~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  134 (311)
T 3m2p_A           68 HLAATRGSQ---------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYG  134 (311)
T ss_dssp             ECCCCCCSS---------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHH
T ss_pred             EccccCCCC---------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhH
Confidence            999976522         33557889999998888887    45556789999997664321           2346899


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC---------CCCCHHHHHHHHHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME---------RPGEPKEVSSLVAF  221 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~  221 (251)
                      .+|.+.+.+++.++.+   .|++++.+.|+.+.++..........+........+..         .+..++|+|++++.
T Consensus       135 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~  211 (311)
T 3m2p_A          135 VSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIY  211 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHH
Confidence            9999999999988875   68999999999999886653211233334433332211         23468899999999


Q ss_pred             HcCCCCCCccccEEEeCCCcccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++....   .|+.+.+.+|..++
T Consensus       212 ~~~~~~---~~~~~~i~~~~~~s  231 (311)
T 3m2p_A          212 ALKQEK---VSGTFNIGSGDALT  231 (311)
T ss_dssp             HTTCTT---CCEEEEECCSCEEC
T ss_pred             HHhcCC---CCCeEEeCCCCccc
Confidence            996543   68999999887544

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.78  E-value=7.6e-18  Score=144.58  Aligned_cols=148  Identities=15%  Similarity=0.113  Sum_probs=115.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHH-hcCC--------------------------------------e---eEEEec
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWK-TKCF--------------------------------------K---VTGSVC   54 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~-~~~~--------------------------------------~---~~~~~~   54 (251)
                      +++||||||+|+||     ..+++.|. +.+.                                      .   +.++.+
T Consensus         2 ~m~vlVTGatG~iG-----~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (397)
T 1gy8_A            2 HMRVLVCGGAGYIG-----SHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG   76 (397)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES
T ss_pred             CCEEEEECCCCHHH-----HHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEEC
Confidence            46899999999999     55555554 3321                                      2   667889


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEe
Q 041276           55 DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV  134 (251)
Q Consensus        55 D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~v  134 (251)
                      |++|++++++++++    + +++|+|||+||... ..    .+.++++..+++|+.+++.+++++    ++.+.++||++
T Consensus        77 Dl~d~~~~~~~~~~----~-~~~d~vih~A~~~~-~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~  142 (397)
T 1gy8_A           77 DVRNEDFLNGVFTR----H-GPIDAVVHMCAFLA-VG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFS  142 (397)
T ss_dssp             CTTCHHHHHHHHHH----S-CCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEE
T ss_pred             CCCCHHHHHHHHHh----c-CCCCEEEECCCccC-cC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEE
Confidence            99999998887764    4 56999999999754 11    134567889999999999999886    44556799999


Q ss_pred             cccccccCCC------------------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCC
Q 041276          135 SSVCGVLSTN------------------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPL  186 (251)
Q Consensus       135 ss~~~~~~~~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~  186 (251)
                      ||.+.+....                  ....|+.+|++.+.+++.++.++   |++++.+.|+.+.++.
T Consensus       143 SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             EEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             CCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            9976543221                  25689999999999999999885   8999999999998875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.78  E-value=9.3e-18  Score=140.48  Aligned_cols=203  Identities=11%  Similarity=0.062  Sum_probs=144.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |+||||||+|+||     ..+++.+.+.+.+                  +.++.+|++|++++++++++      .++|+
T Consensus         2 ~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIG-----SHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ------ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH------SCEEE
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh------cCCCE
Confidence            6899999999999     7888888766543                  34567899999998888864      37999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChh
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTI  148 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~  148 (251)
                      |||+||... .    ..+.++++..+++|+.++..+++++    ++.+.+++|++||...+...           .+...
T Consensus        71 vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           71 VMHFAADSL-V----GVSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEECCCCCC-H----HHHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EEECCcccC-c----cccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            999999754 1    1134567889999999999998886    44555799999997765321           23578


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-------CC--HHHHHHHhhCCC------------CC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-------SD--EKFLEEVKCRTP------------ME  207 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-------~~--~~~~~~~~~~~~------------~~  207 (251)
                      |+.+|.+.+.+++.++.+   .|++++.+.|+.+.++......       ..  +.+........+            .+
T Consensus       142 Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHT---SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            999999999999998876   4899999999999887522111       01  111221111111            11


Q ss_pred             ----CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          208 ----RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       208 ----~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                          .+..++|+|++++.++........++.+.+.+|..+
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence                234689999999888853222123678888877544

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.77  E-value=5.8e-18  Score=141.20  Aligned_cols=206  Identities=12%  Similarity=0.052  Sum_probs=146.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE----eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS----VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~----~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      .+|+||||||+|+||     ..+++.+.+.+.++..+    .+|++|.++++++++..      ++|+|||+|+... . 
T Consensus         2 ~~~~ilVtGatG~iG-----~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~------~~d~vih~a~~~~-~-   68 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVG-----SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASE------RIDQVYLAAAKVG-G-   68 (321)
T ss_dssp             CCEEEEEETTTSHHH-----HHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHH------CCSEEEECCCCCC-C-
T ss_pred             CCCEEEEECCCcHHH-----HHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhc------CCCEEEEcCeecC-C-
Confidence            357899999999999     89999999888776654    37999999988888643      6999999999653 1 


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-------------C--C-ChhhHHhHHH
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-------------N--L-GTIYAATKGA  155 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-------------~--~-~~~Y~~sK~a  155 (251)
                        .....++....+++|+.++..+++++.    +.+.+++|++||...+...             +  + ...|+.+|.+
T Consensus        69 --~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  142 (321)
T 1e6u_A           69 --IVANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  142 (321)
T ss_dssp             --HHHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             --cchhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHH
Confidence              111234567789999999999988874    4455799999998765321             1  1 2589999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----HHHHHHHhh-------CCC-------CCCCCCHHHHHH
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----EKFLEEVKC-------RTP-------MERPGEPKEVSS  217 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~~~~~~-------~~~-------~~~~~~~~dva~  217 (251)
                      .+.+++.++.+.   +++++.+.|+.+.+|........    ..+...+..       ..+       ...+..++|+|+
T Consensus       143 ~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~  219 (321)
T 1e6u_A          143 GIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA  219 (321)
T ss_dssp             HHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHH
Confidence            999999988763   89999999999988865421111    222232211       111       112347899999


Q ss_pred             HHHHHcCCCCC------CccccEEEeCCCccc
Q 041276          218 LVAFLCMPAAS------YITGQTICVDGGFTV  243 (251)
Q Consensus       218 ~~~~l~~~~~~------~~~G~~i~vdgG~~~  243 (251)
                      +++.++.....      ...|+.+.+.+|..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          220 ASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             HHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             HHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence            99998854321      123688888877544

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.77  E-value=8.7e-18  Score=141.42  Aligned_cols=206  Identities=14%  Similarity=0.129  Sum_probs=139.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-------C------------------eeEEEeccCCCHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKC-------F------------------KVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~-------~------------------~~~~~~~D~~~~~~~~~~~   66 (251)
                      ...+++|+||||||+|+||     ..+++.+.+.|       .                  ++.++.+|++|++++++++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG-----~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVG-----RKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHH-----HHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CCCccCCEEEEECCCcHHH-----HHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHH
Confidence            4467899999999999999     67777766555       2                  3456778999999988887


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCC-C
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLST-N  144 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~-~  144 (251)
                      +       +++|+|||+||...      ..+.++++..+++|+.++..+++++.+...+. +.++||++||.+.+.+. +
T Consensus        84 ~-------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~  150 (342)
T 2hrz_A           84 E-------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP  150 (342)
T ss_dssp             H-------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred             h-------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence            5       37999999999653      12346788999999999999999987754332 24799999998776543 1


Q ss_pred             ----------CChhhHHhHHHHHHHHHHHHHHHc--cCCeEEEEEe--cCcccCCCCCCCCCCHHHHHHHhhCC----CC
Q 041276          145 ----------LGTIYAATKGAMNQLAKNLACEWA--RDNIRINSVA--PWFITTPLTEPYLSDEKFLEEVKCRT----PM  206 (251)
Q Consensus       145 ----------~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~i~--pG~v~t~~~~~~~~~~~~~~~~~~~~----~~  206 (251)
                                +...|+.+|++.+.+++.++.+..  ...+|++.+.  ||...++... +  ...+........    +.
T Consensus       151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~--~~~~~~~~~~~~~~~~~~  227 (342)
T 2hrz_A          151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-F--FSNILREPLVGQEAVLPV  227 (342)
T ss_dssp             SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-H--HHHHHHHHHTTCCEEECS
T ss_pred             CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-H--HHHHHHHHhcCCCeeccC
Confidence                      467899999999999998877521  1234555555  6654332210 0  012222222221    22


Q ss_pred             CC-----CCCHHHHHHHHHHHcCCCCC-CccccEEEeC
Q 041276          207 ER-----PGEPKEVSSLVAFLCMPAAS-YITGQTICVD  238 (251)
Q Consensus       207 ~~-----~~~~~dva~~~~~l~~~~~~-~~~G~~i~vd  238 (251)
                      ..     +..++|+|+.++.++..... ...++.+++.
T Consensus       228 ~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          228 PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             CTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             CCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence            21     35799999999988853211 0136677774

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.77  E-value=1.2e-17  Score=140.46  Aligned_cols=198  Identities=13%  Similarity=0.091  Sum_probs=140.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc-CCe-------------------eEEEeccCCCH-HHHHHHHHHHHHhcCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK-CFK-------------------VTGSVCDASSR-AEREKLMKQVSSLFNGK   76 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~-~~~-------------------~~~~~~D~~~~-~~~~~~~~~i~~~~~~~   76 (251)
                      |+||||||+|+||     ..+++.+.+. +.+                   +.++.+|+++. +.++++++        +
T Consensus         1 m~vlVtGatG~iG-----~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIG-----NHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--------K   67 (345)
T ss_dssp             CEEEEETCSSHHH-----HHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred             CeEEEECCCcHHH-----HHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc--------C
Confidence            5799999999999     7777777665 433                   45667899874 55666553        5


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC------------
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN------------  144 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~------------  144 (251)
                      +|+|||+||... ..    ...+++...+++|+.++..+++++    ++.+ +++|++||...+....            
T Consensus        68 ~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~  137 (345)
T 2bll_A           68 CDVVLPLVAIAT-PI----EYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLI  137 (345)
T ss_dssp             CSEEEECBCCCC-HH----HHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred             CCEEEEcccccC-cc----chhcCHHHHHHHHHHHHHHHHHHH----HHhC-CeEEEEecHHHcCCCCCCCcCCcccccc
Confidence            899999999754 11    113456778999999999888887    3444 7999999976543211            


Q ss_pred             ------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----C-C---HHHHHHHhhCCCC----
Q 041276          145 ------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----S-D---EKFLEEVKCRTPM----  206 (251)
Q Consensus       145 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~-~---~~~~~~~~~~~~~----  206 (251)
                            ....|+.+|.+.+.+++.++.+.   |++++.+.|+.+.+|......    . .   ..+........+.    
T Consensus       138 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (345)
T 2bll_A          138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLID  214 (345)
T ss_dssp             CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGG
T ss_pred             cCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEEC
Confidence                  12279999999999999998763   899999999999888654321    0 1   2222222222221    


Q ss_pred             -----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          207 -----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       207 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                           ..+..++|+|++++.++.......+|+.+.+.+|.
T Consensus       215 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          215 GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             GSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence                 13567999999999999654434679999999874

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.77  E-value=3.4e-17  Score=139.88  Aligned_cols=203  Identities=13%  Similarity=0.008  Sum_probs=141.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------------------eeEEEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF------------------------------KVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------------------~~~~~~~D~~~~~~~~~~~~   67 (251)
                      |+||||||+|+||     ..+++.+.+.|.                              .+.++.+|++|.+++.++++
T Consensus        29 k~vlVtGatG~IG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  103 (381)
T 1n7h_A           29 KIALITGITGQDG-----SYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWID  103 (381)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHH
T ss_pred             CeEEEEcCCchHH-----HHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHH
Confidence            7899999999999     677766655432                              45677889999999998887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccC----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLS----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~----  142 (251)
                      .+      ++|+|||+||... .    ..+.++++..+++|+.++..+++++.+.+.++ +.++||++||...+..    
T Consensus       104 ~~------~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~  172 (381)
T 1n7h_A          104 VI------KPDEVYNLAAQSH-V----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP  172 (381)
T ss_dssp             HH------CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS
T ss_pred             hc------CCCEEEECCcccC-c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCC
Confidence            54      6999999999754 1    12345678899999999999999999987653 3469999999875432    


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCC---------
Q 041276          143 ------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRT---------  204 (251)
Q Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~---------  204 (251)
                            ..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..|........   ..+........         
T Consensus       173 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  249 (381)
T 1n7h_A          173 QSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNL  249 (381)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCC
Confidence                  3346789999999999999998875   45444444444433322111000   11111111111         


Q ss_pred             -CCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          205 -PMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       205 -~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                       ....+..++|+|++++.++....    ++.+.+.+|..+
T Consensus       250 ~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          250 QASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             CceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence             11235679999999999996533    478888888654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.76  E-value=4.8e-18  Score=139.57  Aligned_cols=192  Identities=14%  Similarity=0.179  Sum_probs=141.7

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE   95 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~   95 (251)
                      +||||||+|+||     ..+++.+.+.|.++..+   .+|++|.+++.++++..      ++|+|||+||... .    .
T Consensus         7 ~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~------~~d~vi~~a~~~~-~----~   70 (287)
T 3sc6_A            7 RVIITGANGQLG-----KQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEI------RPHIIIHCAAYTK-V----D   70 (287)
T ss_dssp             EEEEESTTSHHH-----HHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHH------CCSEEEECCCCCC-H----H
T ss_pred             EEEEECCCCHHH-----HHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhc------CCCEEEECCcccC-h----H
Confidence            899999999999     89999999888777765   48999999999988753      6999999999764 1    1


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhHHhHHHHHHHHHHHH
Q 041276           96 YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYAATKGAMNQLAKNLA  164 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la  164 (251)
                      ...++++..+++|+.++..+++++.+    .+ .++|++||...+.+.           .+...|+.+|.+.+.+++.++
T Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  145 (287)
T 3sc6_A           71 QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELH  145 (287)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence            11245678999999999999998743    33 489999998765332           235689999999999998764


Q ss_pred             HHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC-------CCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          165 CEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-------RPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       165 ~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      .       ++..+.|+.+.+|....+  ...+........+..       .+..++|+|++++.++....    ++.+.+
T Consensus       146 ~-------~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i  212 (287)
T 3sc6_A          146 N-------KYFIVRTSWLYGKYGNNF--VKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL----YGTYHV  212 (287)
T ss_dssp             S-------SEEEEEECSEECSSSCCH--HHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC----CEEEEC
T ss_pred             C-------CcEEEeeeeecCCCCCcH--HHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC----CCeEEE
Confidence            4       357889999988754322  122333332222221       33459999999999997544    668899


Q ss_pred             CCCcccc
Q 041276          238 DGGFTVN  244 (251)
Q Consensus       238 dgG~~~~  244 (251)
                      .+|..++
T Consensus       213 ~~~~~~s  219 (287)
T 3sc6_A          213 SNTGSCS  219 (287)
T ss_dssp             CCBSCEE
T ss_pred             cCCCccc
Confidence            8886543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.76  E-value=4e-17  Score=138.84  Aligned_cols=203  Identities=12%  Similarity=0.027  Sum_probs=137.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----------------------------CeeEEEeccCCCHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC-----------------------------FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      +|+||||||+|+||     ..+++.+.+.|                             .++.++.+|++|++++.++++
T Consensus         1 m~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (372)
T 1db3_A            1 SKVALITGVTGQDG-----SYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILR   75 (372)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHH
T ss_pred             CCEEEEECCCChHH-----HHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHH
Confidence            37899999999999     44444443332                             245667889999999998887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----  143 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----  143 (251)
                      .+      ++|+|||+||....     ..+.++++..+++|+.++..+++++.+.+.+ +.++||++||.+.+...    
T Consensus        76 ~~------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~  143 (372)
T 1db3_A           76 EV------QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIP  143 (372)
T ss_dssp             HH------CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSS
T ss_pred             hc------CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCC
Confidence            54      69999999997542     1233456788999999999999998765433 23799999998665321    


Q ss_pred             -------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCC-C-------
Q 041276          144 -------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRT-P-------  205 (251)
Q Consensus       144 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~-~-------  205 (251)
                             .+...|+.+|++.+.+++.++.++   ++.+..+.|..+..|........   ..+........ +       
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  220 (372)
T 1db3_A          144 QKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM  220 (372)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred             CCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCC
Confidence                   235689999999999999998874   56666666665555533211000   11222222111 1       


Q ss_pred             --CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          206 --MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       206 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                        ...+..++|+|++++.++....    ++.+.+.+|..+
T Consensus       221 ~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  256 (372)
T 1db3_A          221 DSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQY  256 (372)
T ss_dssp             TCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred             CceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCce
Confidence              0135678999999998885432    467777776543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.76  E-value=1.6e-17  Score=137.86  Aligned_cols=199  Identities=16%  Similarity=0.121  Sum_probs=140.1

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc--CCee----------------EEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK--CFKV----------------TGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~--~~~~----------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +|+||||||+|+||     ..+++.+.+.  +.++                .++.+|++|++++++++++      .++|
T Consensus         2 ~~~vlVtGatG~iG-----~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d   70 (312)
T 2yy7_A            2 NPKILIIGACGQIG-----TELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEV------HKIT   70 (312)
T ss_dssp             CCCEEEETTTSHHH-----HHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHH------TTCC
T ss_pred             CceEEEECCccHHH-----HHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhh------cCCC
Confidence            47899999999999     7777777665  4333                3567899999998888864      2799


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC------------CCC
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST------------NLG  146 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~------------~~~  146 (251)
                      +|||+||... .     ...++.+..+++|+.++..+++++    ++.+.+++|++||...+.+.            .+.
T Consensus        71 ~vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           71 DIYLMAALLS-A-----TAEKNPAFAWDLNMNSLFHVLNLA----KAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             EEEECCCCCH-H-----HHHHCHHHHHHHHHHHHHHHHHHH----HTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             EEEECCccCC-C-----chhhChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            9999999653 1     113556788999999999999887    44555799999998765432            235


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--C---HHHHHHHhhCC-C-------CCCCCCHH
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--D---EKFLEEVKCRT-P-------MERPGEPK  213 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~---~~~~~~~~~~~-~-------~~~~~~~~  213 (251)
                      ..|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+...+...  .   ..+........ +       ...+..++
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  217 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMD  217 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHH
T ss_pred             chhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHH
Confidence            689999999999999988763   8999999999998865432211  1   11122222111 0       11234579


Q ss_pred             HHHHHHHHHcCCCCCCc-cccEEEeCC
Q 041276          214 EVSSLVAFLCMPAASYI-TGQTICVDG  239 (251)
Q Consensus       214 dva~~~~~l~~~~~~~~-~G~~i~vdg  239 (251)
                      |+|++++.++....... .|+.+.+.+
T Consensus       218 Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          218 DAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHhCcccccccCceEEeCC
Confidence            99999999886433222 257888864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.76  E-value=1.1e-17  Score=136.31  Aligned_cols=186  Identities=17%  Similarity=0.106  Sum_probs=132.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE----------EeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTG----------SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~----------~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      ++||||||+|+||     ..+++.+.+ +.++..          +.+|++|+++++++++.+      ++|+||||||..
T Consensus         1 m~ilVtGatG~iG-----~~l~~~L~~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~vi~~a~~~   68 (273)
T 2ggs_A            1 MRTLITGASGQLG-----IELSRLLSE-RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKK------RPDVIINAAAMT   68 (273)
T ss_dssp             CCEEEETTTSHHH-----HHHHHHHTT-TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHH------CCSEEEECCCCC
T ss_pred             CEEEEECCCChhH-----HHHHHHHhc-CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhc------CCCEEEECCccc
Confidence            3699999999999     888888884 666655          468999999999988753      699999999975


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC----------CChhhHHhHHHHH
Q 041276           88 YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN----------LGTIYAATKGAMN  157 (251)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~----------~~~~Y~~sK~a~~  157 (251)
                      . .    +.+.+++++.+++|+.++..+++++.+    .+ ++||++||...+.+.+          +...|+.+|++.+
T Consensus        69 ~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  138 (273)
T 2ggs_A           69 D-V----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGE  138 (273)
T ss_dssp             C-H----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHH
T ss_pred             C-h----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHH
Confidence            4 1    123467889999999999999999843    34 5999999988765433          2568999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC------CCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP------MERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      .+++.    +     ....+.|+.+..+  ..+  ...+........+      ...+..++|+|+++++++....   +
T Consensus       139 ~~~~~----~-----~~~~iR~~~v~G~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~---~  202 (273)
T 2ggs_A          139 TFALQ----D-----DSLIIRTSGIFRN--KGF--PIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK---T  202 (273)
T ss_dssp             HHHCC----T-----TCEEEEECCCBSS--SSH--HHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC---C
T ss_pred             HHHhC----C-----CeEEEeccccccc--cHH--HHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc---C
Confidence            99886    2     2344556555421  110  1122222222222      2357889999999999996532   4


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      | .+.+++ ..+
T Consensus       203 g-~~~i~~-~~~  212 (273)
T 2ggs_A          203 G-IIHVAG-ERI  212 (273)
T ss_dssp             E-EEECCC-CCE
T ss_pred             C-eEEECC-Ccc
Confidence            5 788887 443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=4.4e-17  Score=138.91  Aligned_cols=202  Identities=11%  Similarity=0.009  Sum_probs=140.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------------------eeEEEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF------------------------------KVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------------------~~~~~~~D~~~~~~~~~~~~   67 (251)
                      |+||||||+|+||     ..+++.+.+.|.                              ++.++.+|++|++++.++++
T Consensus        25 ~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (375)
T 1t2a_A           25 NVALITGITGQDG-----SYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIIN   99 (375)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHH
T ss_pred             cEEEEECCCchHH-----HHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHH
Confidence            6899999999999     666666655432                              35567889999999998887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----  142 (251)
                      .+      ++|+|||+||... .    ..+.++++..+++|+.++..+++++.+...+ +.++||++||.+.+..     
T Consensus       100 ~~------~~d~vih~A~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~  167 (375)
T 1t2a_A          100 EV------KPTEIYNLGAQSH-V----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIP  167 (375)
T ss_dssp             HH------CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSS
T ss_pred             hc------CCCEEEECCCccc-c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCC
Confidence            54      6999999999653 1    1234567889999999999999998765432 2379999999876542     


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhC-CC---C---
Q 041276          143 ------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCR-TP---M---  206 (251)
Q Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~-~~---~---  206 (251)
                            ..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..|........   ..+....... .+   .   
T Consensus       168 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  244 (375)
T 1t2a_A          168 QKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL  244 (375)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred             CCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCC
Confidence                  2235689999999999999998874   67777788877766643221100   1111222211 11   1   


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          207 ---ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       207 ---~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                         ..+..++|+|++++.++....    ++.+.+.+|..+
T Consensus       245 ~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  280 (375)
T 1t2a_A          245 DAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEVH  280 (375)
T ss_dssp             TCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCCE
T ss_pred             CceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCcc
Confidence               134579999999999885432    356777766543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.75  E-value=3.6e-17  Score=137.17  Aligned_cols=202  Identities=12%  Similarity=0.018  Sum_probs=139.2

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------------eeEEEeccCCCHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF------------------------KVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~------------------------~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      -.+++||||||+|+||     ..+++.+.+.|.                        .+.++.+|++|+++++++++.+ 
T Consensus        12 ~~~~~vlVTGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDG-----AYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-   85 (335)
T ss_dssp             ---CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCeEEEECCCChHH-----HHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-
Confidence            3568999999999999     666666665432                        3556788999999999888753 


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCC-----
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTN-----  144 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~-----  144 (251)
                           ++|+|||+||... .    ..+.++++..+++|+.++..+++++.+.    + .++||++||...+....     
T Consensus        86 -----~~d~Vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~  151 (335)
T 1rpn_A           86 -----QPQEVYNLAAQSF-V----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQD  151 (335)
T ss_dssp             -----CCSEEEECCSCCC-H----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBC
T ss_pred             -----CCCEEEECccccc-h----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCC
Confidence                 6999999999643 1    1112346788999999999999988443    4 27999999976654321     


Q ss_pred             ------CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCC-CC---C----
Q 041276          145 ------LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRT-PM---E----  207 (251)
Q Consensus       145 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~-~~---~----  207 (251)
                            +...|+.+|.+.+.+++.++.++   ++++..+.|+.+..|........   ..+........ +.   +    
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~  228 (335)
T 1rpn_A          152 ENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDA  228 (335)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred             cccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcc
Confidence                  24589999999999999998764   67788888988877754321100   11122222111 11   1    


Q ss_pred             --CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          208 --RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       208 --~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                        .+..++|+|++++.++....    ++.+.+.+|..+
T Consensus       229 ~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          229 KRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             EEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             eeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence              24567999999999986432    367888777644

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.74  E-value=2.1e-17  Score=136.97  Aligned_cols=199  Identities=13%  Similarity=0.107  Sum_probs=138.1

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEe-----------------ccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSV-----------------CDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      +||||||+|+||     ..+++.+.+.| .++..+.                 +|+++.+.++++++...  + +++|+|
T Consensus         1 ~vlVtGatG~iG-----~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~-~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIG-----SNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEE--F-GDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHH-----HHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCC--C-SSCCEE
T ss_pred             CEEEEcCccHHH-----HHHHHHHHHCCCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccc--c-CCCcEE
Confidence            489999999999     88999998887 6665542                 45556666555553100  1 279999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC-----------CChhh
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN-----------LGTIY  149 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----------~~~~Y  149 (251)
                      ||+||....       ..++++..+++|+.++..+++++.+    .+. ++|++||...+....           +...|
T Consensus        73 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           73 FHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             EECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             EECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            999997642       1234577899999999999998744    344 899999986543322           25689


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---CC-CHHHHHHHhhCCC----------CCCCCCHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---LS-DEKFLEEVKCRTP----------MERPGEPKEV  215 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---~~-~~~~~~~~~~~~~----------~~~~~~~~dv  215 (251)
                      +.+|.+.+.+++.++.+   .|++++.+.||.+.+|.....   .. ...+........+          ...+..++|+
T Consensus       141 ~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            99999999999988765   589999999999988864311   00 1122222221111          2234568999


Q ss_pred             HHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          216 SSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       216 a~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |++++.++....    |+.+.+.+|..++
T Consensus       218 a~~~~~~~~~~~----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          218 ADVNLWFLENGV----SGIFNLGTGRAES  242 (310)
T ss_dssp             HHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHHHhcCC----CCeEEEeCCCccC
Confidence            999999986433    7899998886543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.74  E-value=2.3e-17  Score=150.51  Aligned_cols=201  Identities=13%  Similarity=0.097  Sum_probs=143.7

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CC-------------------eeEEEeccCCCHHH-HHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTK-CF-------------------KVTGSVCDASSRAE-REKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~-------------------~~~~~~~D~~~~~~-~~~~~~~i~~~~   73 (251)
                      +++|+||||||+|+||     ..+++.+.+. +.                   ++.++.+|+++.++ ++++++      
T Consensus       313 ~~~~~VLVTGatG~IG-----~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIG-----NHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHH-----HHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHH-----HHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc------
Confidence            4789999999999999     7777777654 32                   34566789988654 554542      


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----------  143 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----------  143 (251)
                        ++|+|||+||... ..    ...+++...+++|+.++..+++++.    +.+ +++|++||...+...          
T Consensus       382 --~~D~Vih~Aa~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~aa~----~~~-~r~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T 1z7e_A          382 --KCDVVLPLVAIAT-PI----EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHS  449 (660)
T ss_dssp             --HCSEEEECCCCCC-TH----HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred             --CCCEEEECceecC-cc----ccccCHHHHHHhhhHHHHHHHHHHH----HhC-CEEEEEecHHHcCCCCCcccCCCcc
Confidence              5999999999754 11    1234567899999999999888874    344 799999997765321          


Q ss_pred             --------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----C--C--CHHHHHHHhhCCCC-
Q 041276          144 --------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----L--S--DEKFLEEVKCRTPM-  206 (251)
Q Consensus       144 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----~--~--~~~~~~~~~~~~~~-  206 (251)
                              .....|+.||.+.+.+++.++.+.   |++++.+.||.+.++.....    .  .  ...+........+. 
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  526 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  526 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEE
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcE
Confidence                    122379999999999999998763   89999999999998875321    0  0  12333333333332 


Q ss_pred             --------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          207 --------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       207 --------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                              ..+..++|+|++++.++.......+|+.+.+++|.
T Consensus       527 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             EEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             EeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence                    12456999999999999755444679999999984

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.74  E-value=7e-18  Score=139.36  Aligned_cols=196  Identities=14%  Similarity=0.102  Sum_probs=140.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-------VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT   90 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~   90 (251)
                      ++||||||+|+||     ..+++.+. .+.++..+       .+|++|+++++++++..      ++|+|||+||... .
T Consensus         1 m~ilVtGatG~iG-----~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~------~~d~vih~a~~~~-~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVG-----WELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKL------RPDVIVNAAAHTA-V   67 (299)
T ss_dssp             CEEEEECTTSHHH-----HHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHH------CCSEEEECCCCCC-H
T ss_pred             CeEEEECCCCHHH-----HHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhc------CCCEEEECcccCC-H
Confidence            3699999999999     88899888 77777655       38999999988888642      6999999999653 1


Q ss_pred             CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhHHhHHHHHHH
Q 041276           91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYAATKGAMNQL  159 (251)
Q Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~sK~a~~~~  159 (251)
                      .    ...++++..+++|+.++..+++++    ++.+ .++|++||...+.+.           .+...|+.+|.+.+.+
T Consensus        68 ~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           68 D----KAESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             H----HHTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             h----hhhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            1    112345778999999999999887    4444 489999998765432           1246899999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-------CCCCCHHHHHHHHHHHcCCCCCCc-c
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-------ERPGEPKEVSSLVAFLCMPAASYI-T  231 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva~~~~~l~~~~~~~~-~  231 (251)
                      ++.++.       +++.+.|+.+.++....+  ...+........+.       ..+..++|+|++++.++....... .
T Consensus       139 ~~~~~~-------~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  209 (299)
T 1n2s_A          139 LQDNCP-------KHLIFRTSWVYAGKGNNF--AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEV  209 (299)
T ss_dssp             HHHHCS-------SEEEEEECSEECSSSCCH--HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGG
T ss_pred             HHHhCC-------CeEEEeeeeecCCCcCcH--HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhcccccc
Confidence            887642       688899999988865321  12233333332222       123458999999999986432122 5


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      |+.+.+.+|..++
T Consensus       210 ~~~~~i~~~~~~s  222 (299)
T 1n2s_A          210 AGLYHLVAGGTTT  222 (299)
T ss_dssp             CEEEECCCBSCEE
T ss_pred             CceEEEeCCCCCC
Confidence            8899999886543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.74  E-value=1.3e-16  Score=134.02  Aligned_cols=204  Identities=14%  Similarity=0.050  Sum_probs=134.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++||||||+|+||     ..+++.+.+.|.                         ++.++.+|++|+++++++++.    
T Consensus         1 m~vlVTGatG~iG-----~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   71 (338)
T 1udb_A            1 MRVLVTGGSGYIG-----SHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----   71 (338)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc----
Confidence            3699999999999     556655554433                         345677899999998888764    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC----------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS----------  142 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~----------  142 (251)
                        .++|+|||+||... ..    ...+.....+++|+.+++.+++++    ++.+.++||++||.+.+..          
T Consensus        72 --~~~D~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~  140 (338)
T 1udb_A           72 --HAIDTVIHFAGLKA-VG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESF  140 (338)
T ss_dssp             --TTCSEEEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred             --cCCCEEEECCccCc-cc----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCccc
Confidence              26999999999653 11    123445678999999999998864    4455679999999765421          


Q ss_pred             -C-CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--------CCC--HHHHHHHhhC-CC----
Q 041276          143 -T-NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--------LSD--EKFLEEVKCR-TP----  205 (251)
Q Consensus       143 -~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--------~~~--~~~~~~~~~~-~~----  205 (251)
                       . +....|+.||++.+.+++.++.+.  .++++..+.|+.+..+.....        ...  +.+....... .+    
T Consensus       141 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (338)
T 1udb_A          141 PTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF  218 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEe
Confidence             1 225689999999999999998873  378888888876654421100        011  1111111111 10    


Q ss_pred             -------CC----CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          206 -------ME----RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       206 -------~~----~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                             .+    .+..++|+|++++.++........++.+++.+|..+
T Consensus       219 g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~  267 (338)
T 1udb_A          219 GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCE
T ss_pred             cCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCce
Confidence                   11    235689999998887742111123478888777543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.74  E-value=1.7e-18  Score=145.52  Aligned_cols=197  Identities=15%  Similarity=0.128  Sum_probs=126.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +|+||||||+|+||     ..+++.|.+.|.                         ++.++.+|++|++++.+++     
T Consensus         9 ~~~vlVTGatGfIG-----~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----   78 (338)
T 2rh8_A            9 KKTACVVGGTGFVA-----SLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI-----   78 (338)
T ss_dssp             CCEEEEECTTSHHH-----HHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH-----
T ss_pred             CCEEEEECCchHHH-----HHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH-----
Confidence            68999999999999     555555554443                         3445667888877776665     


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--------  143 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--------  143 (251)
                         .++|+|||+|+... .   .  ..+..++.+++|+.+++++++++.+..   +.++||++||.++..+.        
T Consensus        79 ---~~~D~Vih~A~~~~-~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           79 ---AGCDFVFHVATPVH-F---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             ---TTCSEEEEESSCCC-C--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             ---cCCCEEEEeCCccC-C---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcc
Confidence               46899999998542 1   1  112224589999999999999885432   24799999997632110        


Q ss_pred             -------------C---CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCH--HHHHHHhh---
Q 041276          144 -------------N---LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDE--KFLEEVKC---  202 (251)
Q Consensus       144 -------------~---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~---  202 (251)
                                   +   ....|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|.........  ........   
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~  223 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF  223 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc
Confidence                         0   0115999999999888877654   4899999999999999765432210  00000000   


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          203 ----------RTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       203 ----------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                                +.....+..++|+|+++++++...  ..+|..+..+++
T Consensus       224 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~  269 (338)
T 2rh8_A          224 LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYICCAAN  269 (338)
T ss_dssp             HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEECSEE
T ss_pred             ccccccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEEecCC
Confidence                      000013678999999999998542  235655444443

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.73  E-value=1.4e-16  Score=132.58  Aligned_cols=198  Identities=17%  Similarity=0.126  Sum_probs=136.3

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhc--CCee-------------EEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTK--CFKV-------------TGSVCDASSRAEREKLMKQVSSLFNGKLNILINN   83 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~--~~~~-------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~   83 (251)
                      +||||||+|+||     ..+++.+.+.  +.++             .++.+|++|++++.++++.      .++|+|||+
T Consensus         1 ~vlVtGatG~iG-----~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d~vih~   69 (317)
T 3ajr_A            1 MILVTGSSGQIG-----TELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEK------YSIDAIFHL   69 (317)
T ss_dssp             CEEEESTTSTTH-----HHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHH------TTCCEEEEC
T ss_pred             CEEEEcCCcHHH-----HHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhh------cCCcEEEEC
Confidence            489999999999     7777777665  4333             3567899999999888864      379999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC------------CCChhhHH
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST------------NLGTIYAA  151 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~------------~~~~~Y~~  151 (251)
                      |+... .     ...++++..+++|+.++..+++++.    +.+.+++|++||...+.+.            .+...|+.
T Consensus        70 a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~  139 (317)
T 3ajr_A           70 AGILS-A-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGV  139 (317)
T ss_dssp             CCCCH-H-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHH
T ss_pred             CcccC-C-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHH
Confidence            99653 1     1234567889999999999998874    4455799999998776432            13568999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--C---HHHHHHHhhCC---CC-----CCCCCHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--D---EKFLEEVKCRT---PM-----ERPGEPKEVSSL  218 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~---~~~~~~~~~~~---~~-----~~~~~~~dva~~  218 (251)
                      +|.+.+.+++.++.+   .|++++.+.|+.+..+...+...  .   ..+........   +.     ..+..++|+|++
T Consensus       140 sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  216 (317)
T 3ajr_A          140 TKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA  216 (317)
T ss_dssp             HHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHH
Confidence            999999999988765   47999999876665543211100  1   11112121111   00     012357999999


Q ss_pred             HHHHcCCCC-CCccccEEEeCCC
Q 041276          219 VAFLCMPAA-SYITGQTICVDGG  240 (251)
Q Consensus       219 ~~~l~~~~~-~~~~G~~i~vdgG  240 (251)
                      ++.++.... ...+|+.+.+.|+
T Consensus       217 ~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          217 LVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHhCCccccccCceEecCCc
Confidence            988875432 2335788888763

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.73  E-value=2.7e-17  Score=130.23  Aligned_cols=181  Identities=9%  Similarity=0.014  Sum_probs=120.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      +||||||+|+||     ..+++.+.+.|.                  .+.++.+|++|+++         +.+ +++|+|
T Consensus         2 kilVtGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~---------~~~-~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAG-----SAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE---------ADL-DSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH---------HHH-TTCSEE
T ss_pred             EEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH---------hhc-ccCCEE
Confidence            599999999999     677777765553                  34566788888776         223 689999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCC--------------C
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNL--------------G  146 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--------------~  146 (251)
                      ||+||......    .        ..+|+.++.    .+++.+++.+ +++|++||.++..+.+.              .
T Consensus        67 i~~ag~~~~~~----~--------~~~n~~~~~----~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           67 VDALSVPWGSG----R--------GYLHLDFAT----HLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EECCCCCTTSS----C--------THHHHHHHH----HHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EECCccCCCcc----h--------hhHHHHHHH----HHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            99999862111    0        245666654    4555567777 99999999877654433              5


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      ..|+.+|.+.+.+    .......+++++.++||++.++.....  ................+.+++|+|++++.++...
T Consensus       130 ~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          130 PWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATS--YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             TTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCC--EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             hhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccC--ceecccccccCCCCCceEeHHHHHHHHHHHhcCc
Confidence            6899999988854    222246799999999999998732111  0000000000011234678999999999999654


Q ss_pred             CCCccccEEEeCC
Q 041276          227 ASYITGQTICVDG  239 (251)
Q Consensus       227 ~~~~~G~~i~vdg  239 (251)
                      .  ..|+.+.+.+
T Consensus       204 ~--~~g~~~~~~~  214 (224)
T 3h2s_A          204 T--AIRDRIVVRD  214 (224)
T ss_dssp             C--CTTSEEEEEE
T ss_pred             c--ccCCEEEEec
Confidence            3  4588887754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.72  E-value=1.2e-16  Score=134.53  Aligned_cols=197  Identities=11%  Similarity=0.066  Sum_probs=133.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------------------eccCCCHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------------------VCDASSRAEREKLMKQ   68 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------------------~~D~~~~~~~~~~~~~   68 (251)
                      ...+++|+||||||+|+||     ..+++.+.+.+.++..+                       .+|+.+.         
T Consensus        22 ~~~~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---------   87 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVG-----SHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP---------   87 (343)
T ss_dssp             -----CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC---------
T ss_pred             ccccCCCEEEEEcCccHHH-----HHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh---------
Confidence            3456789999999999999     88888887776555443                       2333322         


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-------
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-------  141 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-------  141 (251)
                         .+ .++|+|||+||... ....    .++++..+++|+.++..+++++.+    .+ .++|++||...+.       
T Consensus        88 ---~~-~~~d~vih~A~~~~-~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~  153 (343)
T 2b69_A           88 ---LY-IEVDQIYHLASPAS-PPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQ  153 (343)
T ss_dssp             ---CC-CCCSEEEECCSCCS-HHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSB
T ss_pred             ---hh-cCCCEEEECccccC-chhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCC
Confidence               13 57999999999653 1111    123467889999999999998744    33 4899999976542       


Q ss_pred             ---------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCC----
Q 041276          142 ---------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPM----  206 (251)
Q Consensus       142 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~----  206 (251)
                               +......|+.+|.+.+.+++.++.+   .|++++.+.||.+.+|........  ..+........+.    
T Consensus       154 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (343)
T 2b69_A          154 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYG  230 (343)
T ss_dssp             CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEES
T ss_pred             cccccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcC
Confidence                     2223467999999999999998876   389999999999998864321111  2233333222221    


Q ss_pred             -----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          207 -----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       207 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                           ..+..++|+|++++.++...    .|+.+.+.+|..+
T Consensus       231 ~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~  268 (343)
T 2b69_A          231 SGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  268 (343)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             CCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence                 12457999999999998643    2668888887654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.72  E-value=1.3e-18  Score=136.82  Aligned_cols=184  Identities=16%  Similarity=0.127  Sum_probs=128.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--eeEE--------------EeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF--KVTG--------------SVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--~~~~--------------~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      .+|+|+||||+|+||     ..+++.+.+.+.  ++..              +.+|++++++++++         - +|+
T Consensus         4 ~~~~vlVtGatG~iG-----~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~---------~-~d~   68 (215)
T 2a35_A            4 TPKRVLLAGATGLTG-----EHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG---------S-IDT   68 (215)
T ss_dssp             CCCEEEEECTTSHHH-----HHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCS---------C-CSE
T ss_pred             CCceEEEECCCcHHH-----HHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHh---------h-hcE
Confidence            468999999999999     888888888775  4433              34455444332221         1 899


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      |||++|... .      +.+.+++.+++|+.++..+++++    ++.+.+++|++||......  ....|+.+|.+.+.+
T Consensus        69 vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~  135 (215)
T 2a35_A           69 AFCCLGTTI-K------EAGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGELEQA  135 (215)
T ss_dssp             EEECCCCCH-H------HHSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHH
T ss_pred             EEECeeecc-c------cCCCHHHHHHhhHHHHHHHHHHH----HHcCCCEEEEECCcccCCC--CccHHHHHHHHHHHH
Confidence            999999653 1      13457788999999999988886    4445579999999887643  356899999999988


Q ss_pred             HHHHHHHHccCCeE-EEEEecCcccCCCCCCCCCCHHHHHHHh-hCCCC----CCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          160 AKNLACEWARDNIR-INSVAPWFITTPLTEPYLSDEKFLEEVK-CRTPM----ERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       160 ~~~la~e~~~~~i~-v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++.       .|++ ++.++||++.++......     ...+. ...+.    ..+..++|+|+.++.++....    ++
T Consensus       136 ~~~-------~~~~~~~~vrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~  199 (215)
T 2a35_A          136 LQE-------QGWPQLTIARPSLLFGPREEFRL-----AEILAAPIARILPGKYHGIEACDLARALWRLALEEG----KG  199 (215)
T ss_dssp             HTT-------SCCSEEEEEECCSEESTTSCEEG-----GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC----SE
T ss_pred             HHH-------cCCCeEEEEeCceeeCCCCcchH-----HHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----CC
Confidence            764       3898 999999999988643110     00000 00111    123468999999999996542    66


Q ss_pred             EEEeCCCccc
Q 041276          234 TICVDGGFTV  243 (251)
Q Consensus       234 ~i~vdgG~~~  243 (251)
                      .+.+.++..+
T Consensus       200 ~~~i~~~~~~  209 (215)
T 2a35_A          200 VRFVESDELR  209 (215)
T ss_dssp             EEEEEHHHHH
T ss_pred             ceEEcHHHHH
Confidence            7777766543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.72  E-value=7.8e-17  Score=127.14  Aligned_cols=185  Identities=12%  Similarity=0.119  Sum_probs=115.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-----------------eEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK-----------------VTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~-----------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      ++||||||+|+||     ..+++.+.+.|.+                 +.++.+|++|+++  +       .+ .++|+|
T Consensus         1 MkvlVtGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~-------~~-~~~d~v   65 (221)
T 3ew7_A            1 MKIGIIGATGRAG-----SRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--S-------DL-SDQNVV   65 (221)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--H-------HH-TTCSEE
T ss_pred             CeEEEEcCCchhH-----HHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--h-------hh-cCCCEE
Confidence            3699999999999     7777777766543                 4556788888776  2       23 679999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC------------CChh
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN------------LGTI  148 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~------------~~~~  148 (251)
                      ||+||... ..             ..+|+.+    ++.+++.+++.+.+++|++||..+..+.+            ....
T Consensus        66 i~~ag~~~-~~-------------~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           66 VDAYGISP-DE-------------AEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             EECCCSST-TT-------------TTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred             EECCcCCc-cc-------------cchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            99999743 11             2234444    45555666777778999999988765433            2356


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCC--CCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP--YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      |+.+|.+.+.+. .+..  ...|++++.++||++.++....  +.....   ..........+.+++|+|++++.++...
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~i~~~Dva~~~~~~l~~~  201 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKD---HLLFGSDGNSFISMEDYAIAVLDEIERP  201 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccc---cceecCCCCceEeHHHHHHHHHHHHhCc
Confidence            999999988863 2221  1578999999999998872111  100000   0000011224678999999999999644


Q ss_pred             CCCccccEEEeCCCccc
Q 041276          227 ASYITGQTICVDGGFTV  243 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~  243 (251)
                      .  ..|+.+.+.+-...
T Consensus       202 ~--~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          202 N--HLNEHFTVAGKLEH  216 (221)
T ss_dssp             S--CTTSEEECCC----
T ss_pred             c--ccCCEEEECCCCcc
Confidence            3  46899988775543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.69  E-value=1.2e-16  Score=132.96  Aligned_cols=207  Identities=14%  Similarity=0.095  Sum_probs=136.2

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC----CHHHHHH-----HHHHHHHhcCCCccEEEEccc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS----SRAEREK-----LMKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~-----~~~~i~~~~~~~id~lv~~ag   85 (251)
                      +.+|+||||||+|+||     ..+++.|.+.+.++..+.-+-.    ..+.+..     -++.+.... .++|+|||+|+
T Consensus         5 ~~~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~d~vi~~a~   78 (321)
T 3vps_A            5 TLKHRILITGGAGFIG-----GHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL-SDVRLVYHLAS   78 (321)
T ss_dssp             --CCEEEEETTTSHHH-----HHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHH-TTEEEEEECCC
T ss_pred             cCCCeEEEECCCChHH-----HHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCcc-ccCCEEEECCc
Confidence            4579999999999999     8999999988877766643222    1111110     011111222 37999999999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhHHhHH
Q 041276           86 TNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYAATKG  154 (251)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~sK~  154 (251)
                      ....... .+    .....++ |+.++..+++++    ++.+..+||++||...+...           .+...|+.+|.
T Consensus        79 ~~~~~~~-~~----~~~~~~~-n~~~~~~ll~a~----~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~  148 (321)
T 3vps_A           79 HKSVPRS-FK----QPLDYLD-NVDSGRHLLALC----TSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKV  148 (321)
T ss_dssp             CCCHHHH-TT----STTTTHH-HHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             cCChHHH-Hh----CHHHHHH-HHHHHHHHHHHH----HHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHH
Confidence            7641111 11    1123455 899998888887    34445799999998765432           22568999999


Q ss_pred             HHHHHHHHHHHHHccCCe-EEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC---------CCCCCCHHHHHHHHHHHcC
Q 041276          155 AMNQLAKNLACEWARDNI-RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP---------MERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~  224 (251)
                      +.+.+++.++.+   .++ +++.+.|+.+.+|..........+........+         ...+..++|+|++++.++.
T Consensus       149 ~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~  225 (321)
T 3vps_A          149 GLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN  225 (321)
T ss_dssp             HHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh
Confidence            999999988876   588 999999999998865431111233333322211         1133579999999999997


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 041276          225 PAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ....   | .+.+.+|..++
T Consensus       226 ~~~~---g-~~~i~~~~~~s  241 (321)
T 3vps_A          226 RPLP---S-VVNFGSGQSLS  241 (321)
T ss_dssp             SCCC---S-EEEESCSCCEE
T ss_pred             cCCC---C-eEEecCCCccc
Confidence            6543   7 99999887544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.69  E-value=1.4e-16  Score=135.65  Aligned_cols=192  Identities=14%  Similarity=0.093  Sum_probs=142.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC-CCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA-SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEY   96 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~   96 (251)
                      ++||||||+|.||     ..+++.|.+.+. +.++.+|. +|+++++++++        ++|+|||+||...+.      
T Consensus         1 M~VlVtGatG~iG-----~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~--------~~d~Vih~a~~~~~~------   60 (369)
T 3st7_A            1 MNIVITGAKGFVG-----KNLKADLTSTTD-HHIFEVHRQTKEEELESALL--------KADFIVHLAGVNRPE------   60 (369)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHH--------HCSEEEECCCSBCTT------
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhc--------cCCEEEECCcCCCCC------
Confidence            4699999999999     889999988764 45778899 99999998885        599999999976521      


Q ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCc-eEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEE
Q 041276           97 MAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN  175 (251)
Q Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  175 (251)
                         .....+++|+.++..+++++    ++.+.. ++|++||.....    ...|+.+|.+.+.+++.++++   .|+++.
T Consensus        61 ---~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~---~g~~~~  126 (369)
T 3st7_A           61 ---HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEE---YGNTVY  126 (369)
T ss_dssp             ---CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHH---HCCCEE
T ss_pred             ---CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHH---hCCCEE
Confidence               22345678999998888876    555444 899999987754    568999999999999998887   478899


Q ss_pred             EEecCcccCCCCCCCCCC--HHHHHHHhhCCCCC--------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          176 SVAPWFITTPLTEPYLSD--EKFLEEVKCRTPME--------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       176 ~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+.|+.+..+...+....  ..+........+..        .+..++|+|+.++.++..... ..|+.+.+.+|..++
T Consensus       127 i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~~~i~~~~~~s  204 (369)
T 3st7_A          127 IYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-IENGVPTVPNVFKVT  204 (369)
T ss_dssp             EEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-EETTEECCSCCEEEE
T ss_pred             EEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-cCCceEEeCCCCcee
Confidence            999999988765432211  23333333332222        124589999999999965432 248899998886543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.69  E-value=5.4e-16  Score=136.37  Aligned_cols=201  Identities=15%  Similarity=0.049  Sum_probs=137.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc---C---------------------------------------CeeE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTK---C---------------------------------------FKVT   50 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~---~---------------------------------------~~~~   50 (251)
                      ...++|+||||||+|+||     ..+++++.+.   +                                       .++.
T Consensus        69 ~~~~~~~VLVTGatG~IG-----~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~  143 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLG-----RYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLE  143 (478)
T ss_dssp             CCSCCCEEEEECTTSHHH-----HHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEE
T ss_pred             CCCCCCEEEEECCCcHHH-----HHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceE
Confidence            456789999999999999     4555554433   2                                       3567


Q ss_pred             EEeccCC------CHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 041276           51 GSVCDAS------SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK  124 (251)
Q Consensus        51 ~~~~D~~------~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~  124 (251)
                      ++.+|++      +.+.++++++        ++|+|||+||....         +.+...+++|+.++..+++++    +
T Consensus       144 ~v~~Dl~~~~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa----~  202 (478)
T 4dqv_A          144 VVAGDKSEPDLGLDQPMWRRLAE--------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIA----L  202 (478)
T ss_dssp             EEECCTTSGGGGCCHHHHHHHHH--------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHH----T
T ss_pred             EEEeECCCcccCCCHHHHHHHHc--------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHH----H
Confidence            7788998      5566666663        69999999998652         123467889999999998886    4


Q ss_pred             hCCCceEEEecccccccCCCC----------------------ChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcc
Q 041276          125 ASGAGNIILVSSVCGVLSTNL----------------------GTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFI  182 (251)
Q Consensus       125 ~~~~g~iv~vss~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v  182 (251)
                      +.+..+||++||.+.+.....                      ...|+.||.+.+.+++.++.+.   |++++.+.||.+
T Consensus       203 ~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v  279 (478)
T 4dqv_A          203 TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMI  279 (478)
T ss_dssp             SSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             hCCCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECcee
Confidence            455569999999765432111                      1349999999999999888763   799999999999


Q ss_pred             cCCCC-CCCCCCHHHH----HHHhh--CCCC---------------CCCCCHHHHHHHHHHHcCCC--CCCccccEEEeC
Q 041276          183 TTPLT-EPYLSDEKFL----EEVKC--RTPM---------------ERPGEPKEVSSLVAFLCMPA--ASYITGQTICVD  238 (251)
Q Consensus       183 ~t~~~-~~~~~~~~~~----~~~~~--~~~~---------------~~~~~~~dva~~~~~l~~~~--~~~~~G~~i~vd  238 (251)
                      .++.. .......++.    .....  ..|.               ..+...+|+|++++.++...  .....|+.+.+.
T Consensus       280 ~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~  359 (478)
T 4dqv_A          280 LADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVM  359 (478)
T ss_dssp             ECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEES
T ss_pred             eCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEec
Confidence            87643 2111111111    11111  1111               12356899999999887531  123458889887


Q ss_pred             CCcc
Q 041276          239 GGFT  242 (251)
Q Consensus       239 gG~~  242 (251)
                      ++..
T Consensus       360 ~~~~  363 (478)
T 4dqv_A          360 NPHD  363 (478)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.68  E-value=9.3e-16  Score=125.80  Aligned_cols=181  Identities=14%  Similarity=0.058  Sum_probs=128.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc--CCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK--CFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~--~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      |+||||||+|+||     ..+++.+.+.  +.+                  +.++.+|++|++++.+++        .++
T Consensus         1 ~~ilVtGatG~iG-----~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~--------~~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLG-----GLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAF--------AGV   67 (287)
T ss_dssp             CCEEETTTTSHHH-----HHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred             CeEEEEcCCchHH-----HHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHH--------hcC
Confidence            5799999999999     7777777655  332                  456778999998888776        469


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+|||+|+...        . +      ++|+.++.++++++    ++.+.++||++||.....   ....|+.+|.+.+
T Consensus        68 d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E  125 (287)
T 2jl1_A           68 SKLLFISGPHY--------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE  125 (287)
T ss_dssp             SEEEECCCCCS--------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred             CEEEEcCCCCc--------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence            99999999521        1 1      56888888777776    555567999999987642   2347999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh----CCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC----RTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      .+++.       .|++++.+.||++.++......  ......-..    ......+..++|+|++++.++....  .+|+
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~  194 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGL--RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENK  194 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGG--HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTE
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhH--HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCc
Confidence            88752       5899999999988765422111  111111000    0112256789999999999996532  4799


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      .+.+.+|..++
T Consensus       195 ~~~i~~~~~~s  205 (287)
T 2jl1_A          195 TYNLVSNQPWT  205 (287)
T ss_dssp             EEEECCSSCBC
T ss_pred             EEEecCCCcCC
Confidence            99999986543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.67  E-value=2.7e-15  Score=137.77  Aligned_cols=210  Identities=13%  Similarity=0.044  Sum_probs=138.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ..+++|+||||||+|+||     ..+++.|.+.+.                         ++.++.+|++++++++++++
T Consensus         7 ~~~~~~~ilVTGatG~IG-----~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~   81 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIG-----SHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFK   81 (699)
T ss_dssp             ----CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHH
Confidence            456789999999999999     566665554433                         34456789999998888876


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----  142 (251)
                      .      -++|+|||+||... ...    ..+...+.+++|+.++..+++++    ++.+.++||++||.+.+..     
T Consensus        82 ~------~~~D~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~  146 (699)
T 1z45_A           82 E------YKIDSVIHFAGLKA-VGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFP  146 (699)
T ss_dssp             H------SCCCEEEECCSCCC-HHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGST
T ss_pred             h------CCCCEEEECCcccC-cCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCcccc
Confidence            4      27999999999753 111    12234568899999999887765    4455679999999775421     


Q ss_pred             ----------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CC--HHHHHHHhh
Q 041276          143 ----------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SD--EKFLEEVKC  202 (251)
Q Consensus       143 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~--~~~~~~~~~  202 (251)
                                ......|+.+|++.+.+++.++.+. ..++++..+.|+.+..+......        ..  ..+......
T Consensus       147 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~  225 (699)
T 1z45_A          147 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVG  225 (699)
T ss_dssp             TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTT
T ss_pred             ccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhc
Confidence                      1134689999999999999998775 36899999999888765322111        01  111111111


Q ss_pred             C-CCCC---------------CCCCHHHHHHHHHHHcCCC----CCCccccEEEeCCCccc
Q 041276          203 R-TPME---------------RPGEPKEVSSLVAFLCMPA----ASYITGQTICVDGGFTV  243 (251)
Q Consensus       203 ~-~~~~---------------~~~~~~dva~~~~~l~~~~----~~~~~G~~i~vdgG~~~  243 (251)
                      + .+..               .+...+|+|++++.++...    ...-.|+.+.+.+|..+
T Consensus       226 ~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~  286 (699)
T 1z45_A          226 RREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGS  286 (699)
T ss_dssp             SSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCE
T ss_pred             CCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCC
Confidence            1 1111               1245899999998877421    11124678888877644

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.65  E-value=2.2e-15  Score=133.53  Aligned_cols=200  Identities=13%  Similarity=0.051  Sum_probs=132.6

Q ss_pred             CCCEEEEecCCCCcC----------------------cHHHHHHHHHHHH---------hcCCeeEEEeccCCCHHHHHH
Q 041276           16 QGMTALVTGGTKGLG----------------------NEAELNECLREWK---------TKCFKVTGSVCDASSRAEREK   64 (251)
Q Consensus        16 ~~k~vlItGas~giG----------------------~~~~~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~   64 (251)
                      ..|+||||||+|.||                      .......+.+.+.         ....++.++.+|+++++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            358999999999999                      0111222222211         11346777788888766665 


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc--cc-
Q 041276           65 LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG--VL-  141 (251)
Q Consensus        65 ~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~--~~-  141 (251)
                             .. .++|+|||+|+... .       ...+...+++|+.++..+++.+.+     ...++|++||...  .. 
T Consensus       228 -------~~-~~~D~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~  286 (508)
T 4f6l_B          228 -------LP-ENMDTIIHAGARTD-H-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFD  286 (508)
T ss_dssp             -------CS-SCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEEC
T ss_pred             -------Cc-cCCCEEEECCceec-C-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCc
Confidence                   22 68999999999753 1       234577889999999999998743     4479999999876  10 


Q ss_pred             ---------------CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----C---HHHHHH
Q 041276          142 ---------------STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----D---EKFLEE  199 (251)
Q Consensus       142 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~---~~~~~~  199 (251)
                                     +......|+.+|.+.+.+++.++.    .|++++.+.||.+.++.......    .   ..+...
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~  362 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMND  362 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHH
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHH
Confidence                           012457899999999999987653    59999999999998886544311    1   122222


Q ss_pred             HhhC--CCCC------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          200 VKCR--TPME------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       200 ~~~~--~~~~------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ....  .|..      .+..++|+|+++++++....   .|+++.+.+|..++
T Consensus       363 ~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s  412 (508)
T 4f6l_B          363 LLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP  412 (508)
T ss_dssp             HTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred             HHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence            2221  1111      14568999999999996544   78999999887554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.65  E-value=1e-16  Score=131.72  Aligned_cols=187  Identities=12%  Similarity=0.056  Sum_probs=131.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE--------------EEeccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT--------------GSVCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~--------------~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      ++|+||||| +|+||     ..+++.+.+.|.++.              ++.+|++|++++.++++       +++|+||
T Consensus         2 ~~~~ilVtG-aG~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~~d~vi   68 (286)
T 3gpi_A            2 SLSKILIAG-CGDLG-----LELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVH-------LRPEILV   68 (286)
T ss_dssp             CCCCEEEEC-CSHHH-----HHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGG-------GCCSEEE
T ss_pred             CCCcEEEEC-CCHHH-----HHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhc-------CCCCEEE
Confidence            457899999 59999     888888887765544              45789999988877664       4699999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhH
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYA  150 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~  150 (251)
                      |+|+...          .+....+++|+.++..+++++    ++.+.+++|++||...+...           .+...|+
T Consensus        69 h~a~~~~----------~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  134 (286)
T 3gpi_A           69 YCVAASE----------YSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG  134 (286)
T ss_dssp             ECHHHHH----------HC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHH
T ss_pred             EeCCCCC----------CCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhh
Confidence            9998631          334667889999998888876    45556799999998664322           2356899


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh------CCCCCCCCCHHHHHHHHHHHcC
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC------RTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      .+|.+.+.+ +..        ++++.+.|+.+.++....      +...+..      ......+..++|+|++++.++.
T Consensus       135 ~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  199 (286)
T 3gpi_A          135 KRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLR------MIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQ  199 (286)
T ss_dssp             HHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCH------HHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-Hhc--------CCeEEEecccccCCCchh------HHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHh
Confidence            999998888 542        788999999998876431      2222211      0111134568999999999997


Q ss_pred             CCCCCccccEEEeCCCcccc
Q 041276          225 PAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       225 ~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .......|+.+.+.+|..++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~s  219 (286)
T 3gpi_A          200 QRSHAVPERLYIVTDNQPLP  219 (286)
T ss_dssp             HHTTSCCCSEEEECCSCCEE
T ss_pred             hhccCCCCceEEEeCCCCCC
Confidence            53334568899998886543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.61  E-value=5.9e-15  Score=120.88  Aligned_cols=177  Identities=12%  Similarity=0.049  Sum_probs=119.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhc--CCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTK--CFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~--~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      +||||||+|+||     ..+++.+.+.  +.+                  +.++.+|++|++++.+++        .++|
T Consensus         1 ~ilVtGatG~iG-----~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLG-----HYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSAL--------QGVE   67 (286)
T ss_dssp             CEEEESTTSHHH-----HHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             CEEEEcCCchHH-----HHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHH--------hCCC
Confidence            489999999999     7777777654  332                  456678999998888776        4699


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      +|||+|+... .                .|+.++..++++    +++.+.++||++||.... +  ....|+.+|.+.+.
T Consensus        68 ~vi~~a~~~~-~----------------~~~~~~~~l~~a----~~~~~~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           68 KLLLISSSEV-G----------------QRAPQHRNVINA----AKAAGVKFIAYTSLLHAD-T--SPLGLADEHIETEK  123 (286)
T ss_dssp             EEEECC-------------------------CHHHHHHHH----HHHHTCCEEEEEEETTTT-T--CCSTTHHHHHHHHH
T ss_pred             EEEEeCCCCc-h----------------HHHHHHHHHHHH----HHHcCCCEEEEECCCCCC-C--CcchhHHHHHHHHH
Confidence            9999998521 0                255555555554    455566799999998775 2  23579999999998


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh----CCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC----RTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +++.       .|++++.+.||++.+++...+   ......-..    ......+..++|+|+.++.++....  .+|+.
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~  191 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLASA---PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKV  191 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHTTH---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCE
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHHHh---HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCce
Confidence            8863       489999999998876542110   111111000    0122346789999999999996533  47999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      +.++||..++
T Consensus       192 ~~i~~~~~~s  201 (286)
T 2zcu_A          192 YELAGDSAWT  201 (286)
T ss_dssp             EEECCSSCBC
T ss_pred             EEEeCCCcCC
Confidence            9999986543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.59  E-value=2e-14  Score=118.04  Aligned_cols=179  Identities=12%  Similarity=0.093  Sum_probs=117.4

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhc-CC------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTK-CF------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~-~~------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      +||||||+|+||     ..+++.+.+. +.                  .+.++.+|++|++++.+++        .++|+
T Consensus         2 ~ilVtGatG~iG-----~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~--------~~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLG-----THITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAF--------KGMDT   68 (289)
T ss_dssp             CEEEETTTSHHH-----HHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHT--------TTCSE
T ss_pred             EEEEEcCCchHH-----HHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHH--------hCCCE
Confidence            599999999999     6777776654 33                  3456789999999888877        47999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      |||++|....        .       ..|+.++    +.+++.+++.+.++||++||.......+    |..++..    
T Consensus        69 vi~~a~~~~~--------~-------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~~~~~----~~~~~~~----  121 (289)
T 3e48_A           69 VVFIPSIIHP--------S-------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQHNNP----FHMSPYF----  121 (289)
T ss_dssp             EEECCCCCCS--------H-------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCSTTCC----STTHHHH----
T ss_pred             EEEeCCCCcc--------c-------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCCCCCC----CccchhH----
Confidence            9999996531        0       1244444    4555556777778999999965433332    2233321    


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCC----CCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMER----PGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                       ..+...+...|++++.+.||++.+++....   ......-....+.+.    +..++|+|+.++.++......  |+.+
T Consensus       122 -~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~  195 (289)
T 3e48_A          122 -GYASRLLSTSGIDYTYVRMAMYMDPLKPYL---PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRY  195 (289)
T ss_dssp             -HHHHHHHHHHCCEEEEEEECEESTTHHHHH---HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEE
T ss_pred             -HHHHHHHHHcCCCEEEEeccccccccHHHH---HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceE
Confidence             122333445689999999999988743110   111111111233332    568999999999999765433  8999


Q ss_pred             EeCCCcccc
Q 041276          236 CVDGGFTVN  244 (251)
Q Consensus       236 ~vdgG~~~~  244 (251)
                      .++ |..++
T Consensus       196 ~~~-~~~~s  203 (289)
T 3e48_A          196 LLS-GYSYD  203 (289)
T ss_dssp             EEC-CEEEE
T ss_pred             EeC-CCcCC
Confidence            999 76554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.55  E-value=5.7e-15  Score=121.94  Aligned_cols=185  Identities=14%  Similarity=0.058  Sum_probs=120.1

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC-Ce--------------------eEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC-FK--------------------VTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~--------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .|+||||||+|+||     ..+++.+.+.+ .+                    +.++.+|++|++++.+++        .
T Consensus         5 ~~~ilVtGatG~iG-----~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~--------~   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQG-----GSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELAL--------N   71 (299)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHH--------T
T ss_pred             CCEEEEECCCchHH-----HHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHH--------h
Confidence            48999999999999     66666665544 32                    345678999998888777        4


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC--CCCChhhHHhH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS--TNLGTIYAATK  153 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~--~~~~~~Y~~sK  153 (251)
                      ++|+|||+++.....             ..+.|+..    ++.+++.+++.+.++||++|+......  ......|..+|
T Consensus        72 ~~d~vi~~a~~~~~~-------------~~~~~~~~----~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK  134 (299)
T 2wm3_A           72 GAYATFIVTNYWESC-------------SQEQEVKQ----GKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGK  134 (299)
T ss_dssp             TCSEEEECCCHHHHT-------------CHHHHHHH----HHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHH
T ss_pred             cCCEEEEeCCCCccc-------------cchHHHHH----HHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHH
Confidence            699999999853200             12234444    445555566666689999665443221  11246799999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHH-HHhhCCCCC----CCCCHHHHHHHHHHHcCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLE-EVKCRTPME----RPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~dva~~~~~l~~~~~~  228 (251)
                      .+++.+++.       .|++++.+.||++.+++...+........ ...-..|.+    .+..++|+|+.++.++.... 
T Consensus       135 ~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-  206 (299)
T 2wm3_A          135 GEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-  206 (299)
T ss_dssp             HHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-
T ss_pred             HHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-
Confidence            999988764       37999999999998876542221100000 000012222    34579999999999986432 


Q ss_pred             CccccEEEeCC
Q 041276          229 YITGQTICVDG  239 (251)
Q Consensus       229 ~~~G~~i~vdg  239 (251)
                      ...|+.+.+.|
T Consensus       207 ~~~g~~~~~~g  217 (299)
T 2wm3_A          207 KYVGQNIGLST  217 (299)
T ss_dssp             HHTTCEEECCS
T ss_pred             hhCCeEEEeee
Confidence            23688999886

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.52  E-value=2.3e-14  Score=121.26  Aligned_cols=184  Identities=13%  Similarity=-0.007  Sum_probs=119.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------------eeEEEecc-CCCHHHHHHHHHHHHHhc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------------KVTGSVCD-ASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------------~~~~~~~D-~~~~~~~~~~~~~i~~~~   73 (251)
                      .+|+|+||||+|+||     ..+++.+.+.+.                     .+.++.+| ++|++++.+++       
T Consensus         4 ~~~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~-------   71 (352)
T 1xgk_A            4 QKKTIAVVGATGRQG-----ASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLF-------   71 (352)
T ss_dssp             CCCCEEEESTTSHHH-----HHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHH-------
Confidence            468899999999999     555555544322                     35567789 99999888876       


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccc-cccCCCCChhhHH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVC-GVLSTNLGTIYAA  151 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~-~~~~~~~~~~Y~~  151 (251)
                       .++|+||||++... .               +.|..+     +.+++.+++.+ .++||++||.. +..+......|..
T Consensus        72 -~~~d~Vi~~a~~~~-~---------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~  129 (352)
T 1xgk_A           72 -EGAHLAFINTTSQA-G---------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWA  129 (352)
T ss_dssp             -TTCSEEEECCCSTT-S---------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTH
T ss_pred             -hcCCEEEEcCCCCC-c---------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHH
Confidence             46999999997532 0               113333     44445556665 68999999986 3444445578999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC---CHH-HHHHHhhCCCC---C--CCCCH-HHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS---DEK-FLEEVKCRTPM---E--RPGEP-KEVSSLVAF  221 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~-~~~~~~~~~~~---~--~~~~~-~dva~~~~~  221 (251)
                      +|.+.+.+++.       .|++++.++||++..........   ... .........+.   .  .+..+ +|+|+.++.
T Consensus       130 sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~  202 (352)
T 1xgk_A          130 PKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  202 (352)
T ss_dssp             HHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHH
Confidence            99999998875       27999999999875544322100   000 00000000011   1  23567 899999999


Q ss_pred             HcCCCCCCccccEEEeCCC
Q 041276          222 LCMPAASYITGQTICVDGG  240 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG  240 (251)
                      ++........|+.+.+.++
T Consensus       203 ~l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          203 IFKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHCHHHHTTCEEEECSE
T ss_pred             HHhCCchhhCCeEEEEecC
Confidence            9964323346889998865

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.50  E-value=1.4e-12  Score=110.22  Aligned_cols=196  Identities=10%  Similarity=0.054  Sum_probs=126.8

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC-----C-----------------eeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC-----F-----------------KVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~-----~-----------------~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +|+||||||+|+||     ..+++.+.+.+     .                 ++.++.+|++|++++.++++.    . 
T Consensus         1 ~~~vlVtGatG~iG-----~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIG-----NSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSP----L-   70 (364)
T ss_dssp             CEEEEEETTTSHHH-----HHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTT----C-
T ss_pred             CCEEEEECCCcHHH-----HHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhc----C-
Confidence            47899999999999     88888887665     3                 344667899999988877742    1 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEE-------EecccccccCC----
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNII-------LVSSVCGVLST----  143 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv-------~vss~~~~~~~----  143 (251)
                      +++|+|||+|+...          ++.+..+++|+.++..+++++.+...  +..++|       ++||...+...    
T Consensus        71 ~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~~  138 (364)
T 2v6g_A           71 TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESHD  138 (364)
T ss_dssp             TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCCC
T ss_pred             CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccCC
Confidence            24999999999652          13567889999999999998744211  335776       67876543211    


Q ss_pred             ----------CCChhhHHhHHHHHHHHHHHHHHHccCC-eEEEEEecCcccCCCCCCCCCC--HH-HHHHH--hhCCCCC
Q 041276          144 ----------NLGTIYAATKGAMNQLAKNLACEWARDN-IRINSVAPWFITTPLTEPYLSD--EK-FLEEV--KCRTPME  207 (251)
Q Consensus       144 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-i~v~~i~pG~v~t~~~~~~~~~--~~-~~~~~--~~~~~~~  207 (251)
                                +....|.    +.+.+++.++.   .++ +++..+.|+.+..+........  .. .....  ....+..
T Consensus       139 ~~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~  211 (364)
T 2v6g_A          139 PPYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLR  211 (364)
T ss_dssp             SSBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBC
T ss_pred             CCCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCcee
Confidence                      1133462    23344433332   355 9999999999998865432220  11 12222  1222211


Q ss_pred             ------------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          208 ------------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       208 ------------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                                  .+.+.+|+|++++.++...  ...|+.+.+.+|..+
T Consensus       212 ~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          212 FTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVF  257 (364)
T ss_dssp             CCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCB
T ss_pred             cCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcC
Confidence                        1233488999999888532  236889999888643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.45  E-value=4.5e-13  Score=110.80  Aligned_cols=174  Identities=10%  Similarity=0.081  Sum_probs=107.7

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC----------------------------CeeEEEeccCCCHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC----------------------------FKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~----------------------------~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +|+|+||||+|+||     ..+++.+.+.|                            ..+.++.+|++|++++.+++  
T Consensus         2 ~~~vlVtGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~--   74 (307)
T 2gas_A            2 ENKILILGPTGAIG-----RHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAI--   74 (307)
T ss_dssp             CCCEEEESTTSTTH-----HHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH--
T ss_pred             CcEEEEECCCchHH-----HHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHH--
Confidence            47899999999999     33333332221                            13567888999998887777  


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccccccc------
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVL------  141 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~------  141 (251)
                            .++|+|||++|...                    +.+...++    +.+++.+ .+++|.  |..+..      
T Consensus        75 ------~~~d~vi~~a~~~~--------------------~~~~~~l~----~aa~~~g~v~~~v~--S~~g~~~~~~~~  122 (307)
T 2gas_A           75 ------KQVDIVICAAGRLL--------------------IEDQVKII----KAIKEAGNVKKFFP--SEFGLDVDRHDA  122 (307)
T ss_dssp             ------TTCSEEEECSSSSC--------------------GGGHHHHH----HHHHHHCCCSEEEC--SCCSSCTTSCCC
T ss_pred             ------hCCCEEEECCcccc--------------------cccHHHHH----HHHHhcCCceEEee--cccccCcccccC
Confidence                  46999999999642                    22333333    4445555 567873  333321      


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC------HHHHHHHhhCCCCCCCCCHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEV  215 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dv  215 (251)
                      ..+....| .+|.+++.+++.       .|++++.++||++.+++...+...      ...............+.+++|+
T Consensus       123 ~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  194 (307)
T 2gas_A          123 VEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADV  194 (307)
T ss_dssp             CTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHH
T ss_pred             CCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHH
Confidence            12224578 999998887752       378999999999988754322110      0000000000111234689999


Q ss_pred             HHHHHHHcCCCCCCccccEEEeCC
Q 041276          216 SSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       216 a~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      |+.++.++....  ..|+.+.+.|
T Consensus       195 a~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          195 GTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHcCcc--ccCceEEEeC
Confidence            999999997532  3477888775

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.45  E-value=7.2e-13  Score=111.60  Aligned_cols=184  Identities=12%  Similarity=0.047  Sum_probs=117.3

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +..++||||||+|+||     ..+++.+.+.+.                         .+.++.+|++|.+++.+++++ 
T Consensus         8 M~~~~IlVtGatG~iG-----~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~-   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIG-----QFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE-   81 (346)
T ss_dssp             ---CCEEEECTTSHHH-----HHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH-
T ss_pred             CCCCeEEEECCCcHHH-----HHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh-
Confidence            4468999999999999     445554444332                         456678999999999888864 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccccccc----CCC
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVL----STN  144 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~----~~~  144 (251)
                           .++|+|||+++..                    |+.+...+++++    ++.+ ..++|+ |+.....    +.+
T Consensus        82 -----~~~d~Vi~~a~~~--------------------n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~  131 (346)
T 3i6i_A           82 -----HEIDIVVSTVGGE--------------------SILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVE  131 (346)
T ss_dssp             -----TTCCEEEECCCGG--------------------GGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCT
T ss_pred             -----CCCCEEEECCchh--------------------hHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCC
Confidence                 3799999999962                    777777777766    4444 457775 4332211    123


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH------HHHHHhhCCCCCCCCCHHHHHHH
Q 041276          145 LGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK------FLEEVKCRTPMERPGEPKEVSSL  218 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~~  218 (251)
                      ....|..+|.+.+.+.+.       .|+++..++||++.............      .............+..++|+|+.
T Consensus       132 p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~  204 (346)
T 3i6i_A          132 PGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKF  204 (346)
T ss_dssp             THHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHH
Confidence            456899999998877764       58999999999887765433211100      00000000112235679999999


Q ss_pred             HHHHcCCCCCCccccEEEeCC-Cccc
Q 041276          219 VAFLCMPAASYITGQTICVDG-GFTV  243 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdg-G~~~  243 (251)
                      ++.++....  ..|+.+.+.| |..+
T Consensus       205 ~~~~l~~~~--~~~~~~~i~g~~~~~  228 (346)
T 3i6i_A          205 TMKTVDDVR--TLNKSVHFRPSCNCL  228 (346)
T ss_dssp             HHHHTTCGG--GTTEEEECCCGGGEE
T ss_pred             HHHHHhCcc--ccCeEEEEeCCCCCC
Confidence            999996542  3467777764 4443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.43  E-value=2.5e-12  Score=114.07  Aligned_cols=195  Identities=12%  Similarity=0.044  Sum_probs=128.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe----------ccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV----------CDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~----------~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      +++||||||+|.||     ..+++.|.+.|.++..+.          .|+.+.         ..+.+ .++|+|||+||.
T Consensus       147 ~m~VLVTGatG~IG-----~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~---------~~~~l-~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVG-----RALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNP---------ASDLL-DGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSC---------CTTTT-TTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCCCCccceeecccch---------hHHhc-CCCCEEEECCCC
Confidence            68999999999999     899999988887776653          444321         12334 689999999997


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhHHhHHH
Q 041276           87 NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYAATKGA  155 (251)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~sK~a  155 (251)
                      .. ..   ..+.+.....+++|+.++.++++++.   ++.+.++||++||...+..           ......|+.+|..
T Consensus       212 ~~-~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~  284 (516)
T 3oh8_A          212 PI-FG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRD  284 (516)
T ss_dssp             ---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHH
T ss_pred             cc-cc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHH
Confidence            54 21   33455678899999999999998742   4445579999999765431           1134568888887


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCC--CC------CCCCCHHHHHHHHHHHcCCCC
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRT--PM------ERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~dva~~~~~l~~~~~  227 (251)
                      .+.+.+    +....|++++.+.||.+.++....   ...+...+....  ..      ..+..++|+|++++.++....
T Consensus       285 ~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~~~---~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  357 (516)
T 3oh8_A          285 WEHATA----PASDAGKRVAFIRTGVALSGRGGM---LPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ  357 (516)
T ss_dssp             HHHTTH----HHHHTTCEEEEEEECEEEBTTBSH---HHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHH----HHHhCCCCEEEEEeeEEECCCCCh---HHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence            766543    234579999999999998875310   011111111110  11      123468999999999996433


Q ss_pred             CCccccEEEeCCCccc
Q 041276          228 SYITGQTICVDGGFTV  243 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~  243 (251)
                        ..| .+++.+|..+
T Consensus       358 --~~g-~~ni~~~~~~  370 (516)
T 3oh8_A          358 --ISG-PINAVAPNPV  370 (516)
T ss_dssp             --CCE-EEEESCSCCE
T ss_pred             --cCC-cEEEECCCCC
Confidence              344 5676666543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.43  E-value=8e-13  Score=108.21  Aligned_cols=177  Identities=10%  Similarity=-0.035  Sum_probs=116.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCee------------------EEEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKV------------------TGSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~------------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      ++|||||| |.||     ..+++.+.+.+.++                  .++.+|++|.+            + .++|+
T Consensus         6 ~~ilVtGa-G~iG-----~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------------~-~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTA-----RVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS------------L-DGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHH-----HHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC------------C-TTCCE
T ss_pred             CcEEEECC-cHHH-----HHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc------------c-CCCCE
Confidence            78999998 9999     78888887766544                  44556666621            3 67999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--CCCceEEEecccccccCC-----------CCC
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA--SGAGNIILVSSVCGVLST-----------NLG  146 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~~~g~iv~vss~~~~~~~-----------~~~  146 (251)
                      |||+|+.....      ..                ..+.++..+++  .+..++|++||...+...           .+.
T Consensus        67 vi~~a~~~~~~------~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           67 LLISTAPDSGG------DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EEECCCCBTTB------CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EEECCCccccc------cH----------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            99999965411      11                12344445555  455799999997654322           224


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHH-HHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFL-EEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      ..|+.+|.+.+.+++.+      .+++++.+.|+.+.++....+.....-. ..+........+...+|+|++++.++..
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            57999999999988766      5899999999999887543321100000 0000000122345689999999999965


Q ss_pred             CCCCccccEEEeCCCcccc
Q 041276          226 AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~~~  244 (251)
                      ..   .|+.+.+.+|..++
T Consensus       199 ~~---~g~~~~i~~~~~~s  214 (286)
T 3ius_A          199 PD---PGAVYNVCDDEPVP  214 (286)
T ss_dssp             CC---TTCEEEECCSCCBC
T ss_pred             CC---CCCEEEEeCCCCcc
Confidence            44   68899999887654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.36  E-value=3e-12  Score=106.05  Aligned_cols=179  Identities=8%  Similarity=0.027  Sum_probs=109.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc--------------------------CCeeEEEeccCCCHHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK--------------------------CFKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~--------------------------~~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      .|+|+||||+|+||     ..+++.+.+.                          ...+.++.+|++|++++.+++    
T Consensus         4 ~~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~----   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIG-----KRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL----   74 (313)
T ss_dssp             CCCEEEESTTSTTH-----HHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH----
T ss_pred             CCEEEEEcCCcHHH-----HHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH----
Confidence            36899999999999     3333333222                          124667889999998888777    


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccC------C
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLS------T  143 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~------~  143 (251)
                          .++|+|||+++... ..               .|+.+...++++    +++.+ .++||+ |+......      .
T Consensus        75 ----~~~d~vi~~a~~~~-~~---------------~~~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~~  129 (313)
T 1qyd_A           75 ----KQVDVVISALAGGV-LS---------------HHILEQLKLVEA----IKEAGNIKRFLP-SEFGMDPDIMEHALQ  129 (313)
T ss_dssp             ----TTCSEEEECCCCSS-SS---------------TTTTTHHHHHHH----HHHSCCCSEEEC-SCCSSCTTSCCCCCS
T ss_pred             ----hCCCEEEECCcccc-ch---------------hhHHHHHHHHHH----HHhcCCCceEEe-cCCcCCccccccCCC
Confidence                46999999999754 11               145555555554    46665 578875 43221111      1


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------HHHHHHHhhCCCCCCCCCHHHHH
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------EKFLEEVKCRTPMERPGEPKEVS  216 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva  216 (251)
                      +....| .+|.+++.+.+       ..|++++.+.||++.+++...+...       ......+........+..++|+|
T Consensus       130 p~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva  201 (313)
T 1qyd_A          130 PGSITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVG  201 (313)
T ss_dssp             STTHHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHH
T ss_pred             CCcchH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHH
Confidence            235578 99999888775       2578888899998865433221110       00000000000111345799999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCC
Q 041276          217 SLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      +.++.++....  ..|+.+.+.|
T Consensus       202 ~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          202 TYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHhCcc--cCCceEEEeC
Confidence            99999996542  2477787775

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.31  E-value=3.8e-13  Score=112.04  Aligned_cols=177  Identities=10%  Similarity=0.056  Sum_probs=106.9

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------------CeeEEEeccCCCHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC---------------------------FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------------~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .|+|+||||+|+||     ..+++.|.+.+                           ..+.++.+|++|++++.+++   
T Consensus         4 ~~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~---   75 (321)
T 3c1o_A            4 MEKIIIYGGTGYIG-----KFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL---   75 (321)
T ss_dssp             CCCEEEETTTSTTH-----HHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH---
T ss_pred             ccEEEEEcCCchhH-----HHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH---
Confidence            36799999999999     33333333322                           13567788999988888777   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccC---C--
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLS---T--  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~---~--  143 (251)
                           .++|+|||+++...                    +.+.    +.+++.+++.+ .++||.  |..+...   .  
T Consensus        76 -----~~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~g~v~~~v~--S~~g~~~~~~~~~  124 (321)
T 3c1o_A           76 -----KQVDIVISALPFPM--------------------ISSQ----IHIINAIKAAGNIKRFLP--SDFGCEEDRIKPL  124 (321)
T ss_dssp             -----TTCSEEEECCCGGG--------------------SGGG----HHHHHHHHHHCCCCEEEC--SCCSSCGGGCCCC
T ss_pred             -----cCCCEEEECCCccc--------------------hhhH----HHHHHHHHHhCCccEEec--cccccCccccccC
Confidence                 46999999998532                    2223    44445556655 578873  4333211   1  


Q ss_pred             -CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCC-------CCCCHHHHHHHhhCCCCCCCCCHHHH
Q 041276          144 -NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP-------YLSDEKFLEEVKCRTPMERPGEPKEV  215 (251)
Q Consensus       144 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~dv  215 (251)
                       +....| .+|.+++.+++.       .+++++.+.||++..+....       ...... ...+........+..++|+
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dv  195 (321)
T 3c1o_A          125 PPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDD-IVIYGTGETKFVLNYEEDI  195 (321)
T ss_dssp             HHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSC-EEEETTSCCEEEEECHHHH
T ss_pred             CCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCc-eEEecCCCcceeEeeHHHH
Confidence             113478 999999888762       36788888998875532110       000000 0000000111234679999


Q ss_pred             HHHHHHHcCCCCCCccccEEEeCC-Cccc
Q 041276          216 SSLVAFLCMPAASYITGQTICVDG-GFTV  243 (251)
Q Consensus       216 a~~~~~l~~~~~~~~~G~~i~vdg-G~~~  243 (251)
                      |+.++.++....  ..|+.+.+.| |..+
T Consensus       196 a~~~~~~l~~~~--~~g~~~~~~g~~~~~  222 (321)
T 3c1o_A          196 AKYTIKVACDPR--CCNRIVIYRPPKNII  222 (321)
T ss_dssp             HHHHHHHHHCGG--GTTEEEECCCGGGEE
T ss_pred             HHHHHHHHhCcc--ccCeEEEEeCCCCcc
Confidence            999999996543  3488888876 4443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.26  E-value=3.2e-12  Score=105.67  Aligned_cols=175  Identities=10%  Similarity=0.056  Sum_probs=104.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcC---------------------------CeeEEEeccCCCHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKC---------------------------FKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~---------------------------~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .|+|+||||+|+||     ..+++.+.+.|                           ..+.++.+|++|++++.++++  
T Consensus         4 ~~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIG-----RHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTH-----HHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHH-----HHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc--
Confidence            47899999999999     33333333222                           235677889999988887774  


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccC-----C
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLS-----T  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~-----~  143 (251)
                            ++|+|||+++...                    +.+.    +.+++.+++.+ .+++|+ |+......     .
T Consensus        77 ------~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~  125 (308)
T 1qyc_A           77 ------NVDVVISTVGSLQ--------------------IESQ----VNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVE  125 (308)
T ss_dssp             ------TCSEEEECCCGGG--------------------SGGG----HHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCT
T ss_pred             ------CCCEEEECCcchh--------------------hhhH----HHHHHHHHhcCCCceEee-cccccCccccccCC
Confidence                  5999999998531                    2222    33444456655 578873 43321111     1


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC------HHHHHHHhhCCCCCCCCCHHHHHH
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSS  217 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~  217 (251)
                      +....| .+|.+++.+.+.       .+++++.+.||++.+++...+...      ...............+..++|+|+
T Consensus       126 p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (308)
T 1qyc_A          126 PAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGT  197 (308)
T ss_dssp             THHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred             cchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHH
Confidence            223468 999998887753       368888899988765432211110      000000000001123457899999


Q ss_pred             HHHHHcCCCCCCccccEEEeCC
Q 041276          218 LVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      .++.++....  ..|+.+.+.|
T Consensus       198 ~~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          198 FTIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             HHHTTSSCGG--GTTEEEECCC
T ss_pred             HHHHHHhCcc--ccCeEEEEeC
Confidence            9999886532  3477788765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.18  E-value=1.5e-11  Score=102.23  Aligned_cols=172  Identities=12%  Similarity=0.123  Sum_probs=103.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC----------------------eeEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF----------------------KVTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~----------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      |+||||||+|+||     ..+++.+.+.|.                      .+.++.+|++|++++.+++        .
T Consensus        12 ~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~--------~   78 (318)
T 2r6j_A           12 SKILIFGGTGYIG-----NHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM--------K   78 (318)
T ss_dssp             CCEEEETTTSTTH-----HHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH--------T
T ss_pred             CeEEEECCCchHH-----HHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH--------c
Confidence            6799999999999     444444443321                      3567788999998888777        4


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccC---C---CCChh
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLS---T---NLGTI  148 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~---~---~~~~~  148 (251)
                      ++|+|||+++...                    +...    +.+++.+++.+ .++||+ |+ .+...   .   +....
T Consensus        79 ~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~  132 (318)
T 2r6j_A           79 KVDVVISALAFPQ--------------------ILDQ----FKILEAIKVAGNIKRFLP-SD-FGVEEDRINALPPFEAL  132 (318)
T ss_dssp             TCSEEEECCCGGG--------------------STTH----HHHHHHHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHH
T ss_pred             CCCEEEECCchhh--------------------hHHH----HHHHHHHHhcCCCCEEEe-ec-cccCcccccCCCCcchh
Confidence            6999999998531                    2222    34444456655 567874 43 33111   1   11346


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC----CCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE----PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      | .+|.+++.+++.       .++++..+.||++..++..    ........ ...........+..++|+|+.++.++.
T Consensus       133 y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~~l~  203 (318)
T 2r6j_A          133 I-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEI-TVYGTGEAKFAMNYEQDIGLYTIKVAT  203 (318)
T ss_dssp             H-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEE-EEETTSCCEEEEECHHHHHHHHHHHTT
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCce-EEecCCCceeeEeeHHHHHHHHHHHhc
Confidence            8 999998877753       4788888999877543210    00000000 000000111234578999999999997


Q ss_pred             CCCCCccccEEEeCC
Q 041276          225 PAASYITGQTICVDG  239 (251)
Q Consensus       225 ~~~~~~~G~~i~vdg  239 (251)
                      ...  ..|+.+.+.|
T Consensus       204 ~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          204 DPR--ALNRVVIYRP  216 (318)
T ss_dssp             CGG--GTTEEEECCC
T ss_pred             Ccc--ccCeEEEecC
Confidence            532  2367777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.12  E-value=5.9e-09  Score=85.68  Aligned_cols=202  Identities=13%  Similarity=0.088  Sum_probs=122.5

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHH-HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRA-EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEY   96 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~   96 (251)
                      ++||||||||-||     ..+.+.|.+.|+++..+.-+-...+ ....   ...+.. .++|.+||+||... ..+....
T Consensus         1 MkILVTGatGfIG-----~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~---~~~~~l-~~~d~vihla~~~i-~~~~~~~   70 (298)
T 4b4o_A            1 MRVLVGGGTGFIG-----TALTQLLNARGHEVTLVSRKPGPGRITWDE---LAASGL-PSCDAAVNLAGENI-LNPLRRW   70 (298)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCCTTEEEHHH---HHHHCC-CSCSEEEECCCCCS-SCTTSCC
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCCCcCeeecch---hhHhhc-cCCCEEEEeccCcc-cchhhhh
Confidence            4699999999999     9999999999998887643221100 0011   112234 68999999998643 3333445


Q ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccCC-----------CCChhhHHhHHHHHHHHHHH
Q 041276           97 MAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLST-----------NLGTIYAATKGAMNQLAKNL  163 (251)
Q Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l  163 (251)
                      +.......++.|+.++..+.+.+    .+.+  ...+|+.||...+.+.           .....|+..+...+.     
T Consensus        71 ~~~~~~~~~~~~v~~t~~l~~~~----~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----  141 (298)
T 4b4o_A           71 NETFQKEVLGSRLETTQLLAKAI----TKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEA-----  141 (298)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH----HHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHH-----
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHH----HHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHH-----
Confidence            67777888899999887777665    3333  2456777776554322           122334444443332     


Q ss_pred             HHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhC--CCC------CCCCCHHHHHHHHHHHcCCCCCCccccEE
Q 041276          164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCR--TPM------ERPGEPKEVSSLVAFLCMPAASYITGQTI  235 (251)
Q Consensus       164 a~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~dva~~~~~l~~~~~~~~~G~~i  235 (251)
                      +......++++..+.|+.+..|-....   ..+.......  .+.      ..+...+|+++++..++....  ..| .+
T Consensus       142 ~~~~~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--~~g-~y  215 (298)
T 4b4o_A          142 AARLPGDSTRQVVVRSGVVLGRGGGAM---GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH--VHG-VL  215 (298)
T ss_dssp             HHCCSSSSSEEEEEEECEEECTTSHHH---HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT--CCE-EE
T ss_pred             HHHhhccCCceeeeeeeeEEcCCCCch---hHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC--CCC-eE
Confidence            122346789999999999988743111   1111111111  111      122458999999999885432  345 77


Q ss_pred             EeCCCcccc
Q 041276          236 CVDGGFTVN  244 (251)
Q Consensus       236 ~vdgG~~~~  244 (251)
                      ++.++..++
T Consensus       216 n~~~~~~~t  224 (298)
T 4b4o_A          216 NGVAPSSAT  224 (298)
T ss_dssp             EESCSCCCB
T ss_pred             EEECCCccC
Confidence            787776543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.78  E-value=3.5e-10  Score=88.75  Aligned_cols=175  Identities=11%  Similarity=0.023  Sum_probs=100.2

Q ss_pred             CCCCCEEEEecC----------------CCCcCcHHHHHHHHHHHHhcCCeeEEEe-------------ccCCCHHHHHH
Q 041276           14 SLQGMTALVTGG----------------TKGLGNEAELNECLREWKTKCFKVTGSV-------------CDASSRAEREK   64 (251)
Q Consensus        14 ~l~~k~vlItGa----------------s~giG~~~~~~~~~~~~~~~~~~~~~~~-------------~D~~~~~~~~~   64 (251)
                      +++||+||||||                |||||     .++++.+...|.++.++.             +|+++   .++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG-----~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~---~~~   76 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMG-----FAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMT---ALE   76 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHH-----HHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCS---HHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHH-----HHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCc---HHH
Confidence            579999999999                68999     899999999988877652             34444   556


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHH--HHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccccc
Q 041276           65 LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFL--MSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVL  141 (251)
Q Consensus        65 ~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~  141 (251)
                      +++.+.+.+ +++|++|||||+.. ..+. ....+.+.+.  -+.++.-.+..+.-+++.+.+. ..+.++ |+ .+++.
T Consensus        77 ~~~~v~~~~-~~~Dili~~Aav~d-~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG-FaaEt  151 (226)
T 1u7z_A           77 MEAAVNASV-QQQNIFIGCAAVAD-YRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-VG-FAAET  151 (226)
T ss_dssp             HHHHHHHHG-GGCSEEEECCBCCS-EEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE-EEEES
T ss_pred             HHHHHHHhc-CCCCEEEECCcccC-CCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-EE-cchhh
Confidence            777778888 89999999999764 2222 2233333331  1223333333444555666653 223332 21 11111


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCc-ccCCCCCCC----CCCHHHHHHHhhCCCCCCCCCHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWF-ITTPLTEPY----LSDEKFLEEVKCRTPMERPGEPKEVS  216 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~-v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva  216 (251)
                                     +.+.+....++.++|+.+....|.. ..+.|....    .-..+-    ....   ...+.+++|
T Consensus       152 ---------------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~----~~~~---~~~sK~~vA  209 (226)
T 1u7z_A          152 ---------------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDG----DKVL---PLERKELLG  209 (226)
T ss_dssp             ---------------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTE----EEEE---EEEEHHHHH
T ss_pred             ---------------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCC----cEec---CCCCHHHHH
Confidence                           2355666677777888777776643 233333221    000000    0001   124688899


Q ss_pred             HHHHHHc
Q 041276          217 SLVAFLC  223 (251)
Q Consensus       217 ~~~~~l~  223 (251)
                      +.++..+
T Consensus       210 ~~I~~~i  216 (226)
T 1u7z_A          210 QLLLDEI  216 (226)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877665

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.59  E-value=2.4e-09  Score=87.82  Aligned_cols=92  Identities=15%  Similarity=0.246  Sum_probs=57.4

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .++++|++|||||+||||                   +.++++++.+++... ..+.++.+|+++++++++++       
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~-------  186 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV-------  186 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT-------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHH-------
Confidence            457899999999999999                   334444444444332 12445667888877766655       


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCH-HHHHHHHHhhhHHHH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMA-EDLSFLMSTNFESAY  113 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  113 (251)
                       ..+|+||||+|......+..+.+. +.++..+++|+.+.+
T Consensus       187 -~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          187 -KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -TTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -HhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence             468999999986532222212222 334446666766655

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.51  E-value=4.9e-07  Score=75.34  Aligned_cols=136  Identities=13%  Similarity=0.038  Sum_probs=88.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-----eEEEeccCCC-HHHHH----HHH-------------HHHHHhcC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK-----VTGSVCDASS-RAERE----KLM-------------KQVSSLFN   74 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~-----~~~~~~D~~~-~~~~~----~~~-------------~~i~~~~~   74 (251)
                      ++|+||||+|.||     ..++..+...+..     ...+..|... .+..+    .+.             ....+.+ 
T Consensus         5 mkVlVtGaaGfIG-----~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIG-----YSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHH-----HHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHh-
Confidence            5799999999999     7777777776531     2344466543 11111    111             1123344 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc--------c-CCCC
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV--------L-STNL  145 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~--------~-~~~~  145 (251)
                      .+.|+|||+||....+    ..+   ..+.++.|+.++..+++++..+-  ....+++++|+....        . +.++
T Consensus        79 ~~~D~Vih~Ag~~~~~----~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~~~p  149 (327)
T 1y7t_A           79 KDADYALLVGAAPRKA----GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPGLNP  149 (327)
T ss_dssp             TTCSEEEECCCCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCG
T ss_pred             CCCCEEEECCCcCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCCCCh
Confidence            5799999999975411    122   35678999999999888874431  123588888876521        1 2334


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHHc
Q 041276          146 GTIYAATKGAMNQLAKNLACEWA  168 (251)
Q Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~  168 (251)
                      ...|+.+|...+.+.+.+++.+.
T Consensus       150 ~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          150 RNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHT
T ss_pred             hheeccchHHHHHHHHHHHHHhC
Confidence            45699999999999998887753

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.27  E-value=3.7e-07  Score=71.74  Aligned_cols=67  Identities=18%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCCEEEEecC----------------CCCcCcHHHHHHHHHHHHhcCCeeEEEec------------cCCCHHHHHHHHH
Q 041276           16 QGMTALVTGG----------------TKGLGNEAELNECLREWKTKCFKVTGSVC------------DASSRAEREKLMK   67 (251)
Q Consensus        16 ~~k~vlItGa----------------s~giG~~~~~~~~~~~~~~~~~~~~~~~~------------D~~~~~~~~~~~~   67 (251)
                      +||+||||||                ||++|     .++++.+...|.++.++..            |+.+.++++++++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG-----~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~   76 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLG-----KIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLI   76 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHH-----HHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHH-----HHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHH
Confidence            5899999999                77799     8999999999888877643            2233346788888


Q ss_pred             HHHHhcCCCccEEEEcccCCC
Q 041276           68 QVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~   88 (251)
                      .+.+.+ +++|++|+||++..
T Consensus        77 ~v~~~~-~~~Dili~aAAvsD   96 (232)
T 2gk4_A           77 EMQERV-QDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHG-GGCSEEEECSBCCS
T ss_pred             HHHHhc-CCCCEEEEcCcccc
Confidence            888888 89999999999764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.51  E-value=0.00013  Score=53.87  Aligned_cols=68  Identities=9%  Similarity=0.063  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH--HHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR--AEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      .|-.++|+.-+..-.  .......+.+.+.|.++..+++|++++  ++++++++.+.+.+ |+ |+||||+|+.
T Consensus        39 ~Ga~vvi~~r~~~e~--~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVnnAgg~  108 (157)
T 3gxh_A           39 AGVDVVINLMPDSSK--DAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVHCLANY  108 (157)
T ss_dssp             TTCCEEEECSCTTST--TSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEECSBSH
T ss_pred             cCCCEEEECCCcccc--cccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEECCCCC
Confidence            455566665433221  001123455666688899999999999  99999999999988 78 9999999964

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.46  E-value=0.00012  Score=56.10  Aligned_cols=86  Identities=16%  Similarity=0.226  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------------eccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------------VCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------------~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .|++||||||++|||     ..+.+.+...|.++...                 ..|.++.+..+.+.+.. .  ++++|
T Consensus        38 ~g~~vlV~Ga~ggiG-----~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~-~--~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVG-----MAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELT-D--GYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHH-----HHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHT-T--TCCEE
T ss_pred             CCCEEEEeeCCChHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHh-C--CCCCe
Confidence            589999999999999     44444444444333222                 23444443333332221 1  13699


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC  138 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~  138 (251)
                      ++|+|+|..                           ..+.+++.|+.  .|++|.+++..
T Consensus       110 ~vi~~~g~~---------------------------~~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAGE---------------------------AIQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCTH---------------------------HHHHHHHTEEE--EEEEEECSCGG
T ss_pred             EEEECCchH---------------------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence            999998720                           02344455544  38999998754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.34  E-value=0.00047  Score=47.67  Aligned_cols=56  Identities=21%  Similarity=0.263  Sum_probs=38.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-Ce------------------eEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC-FK------------------VTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      .+++|+|+|+ |++|     ..+++.+...+ .+                  +.++.+|+++.+++.+++        .+
T Consensus         4 ~~~~v~I~G~-G~iG-----~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~   69 (118)
T 3ic5_A            4 MRWNICVVGA-GKIG-----QMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL--------GG   69 (118)
T ss_dssp             TCEEEEEECC-SHHH-----HHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT--------TT
T ss_pred             CcCeEEEECC-CHHH-----HHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH--------cC
Confidence            3578999999 9999     55666665554 22                  234456666666555544        57


Q ss_pred             ccEEEEccc
Q 041276           77 LNILINNVG   85 (251)
Q Consensus        77 id~lv~~ag   85 (251)
                      +|++|++++
T Consensus        70 ~d~vi~~~~   78 (118)
T 3ic5_A           70 FDAVISAAP   78 (118)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999996

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.29  E-value=0.00023  Score=58.00  Aligned_cols=65  Identities=14%  Similarity=0.202  Sum_probs=47.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH-----------------HhcCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS-----------------SLFNG   75 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~-----------------~~~~~   75 (251)
                      .++++|+++|||++ |+|     ..++..+.+.| ++...  |- +.+..+++.+++.                 +.+ +
T Consensus       124 ~~l~~k~vlV~GaG-giG-----~aia~~L~~~G-~V~v~--~r-~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~-~  192 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAA-----RAVAFELAKDN-NIIIA--NR-TVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDL-D  192 (287)
T ss_dssp             CCCCSCEEEEECCS-HHH-----HHHHHHHTSSS-EEEEE--CS-SHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCC-T
T ss_pred             CCcCCCEEEEECch-HHH-----HHHHHHHHHCC-CEEEE--EC-CHHHHHHHHHHHhhhcccccceeEEEeeHHHhh-C
Confidence            35789999999997 999     88889998888 55543  43 3444455544432                 234 6


Q ss_pred             CccEEEEcccCCC
Q 041276           76 KLNILINNVGTNY   88 (251)
Q Consensus        76 ~id~lv~~ag~~~   88 (251)
                      ++|+||||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.28  E-value=2.3e-07  Score=80.47  Aligned_cols=34  Identities=24%  Similarity=0.327  Sum_probs=28.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      ..+.||+|+|||++ +||     ..+++.+...|.++.+.
T Consensus       261 ~~L~GKtVvVtGaG-gIG-----~aiA~~Laa~GA~Viv~  294 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVG-----KGCAAALKQAGARVIVT  294 (488)
T ss_dssp             CCCTTCEEEEECCS-HHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CcccCCEEEEECCC-HHH-----HHHHHHHHHCCCEEEEE
Confidence            45899999999988 999     88999999888766553

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.17  E-value=0.0003  Score=58.37  Aligned_cols=62  Identities=26%  Similarity=0.316  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------------eccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------------VCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------------~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .|++||||||++|||     ..+++.++..|.++...                 .+|.++.+++.+.+.++..   +++|
T Consensus       145 ~g~~vlV~Ga~ggiG-----~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~---~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVG-----SVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP---DGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT---TCEE
T ss_pred             CCCEEEEecCCCcHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC---CCCe
Confidence            589999999999999     55555555444443322                 2344442233333333221   4689


Q ss_pred             EEEEccc
Q 041276           79 ILINNVG   85 (251)
Q Consensus        79 ~lv~~ag   85 (251)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999888

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.15  E-value=0.0011  Score=56.59  Aligned_cols=62  Identities=26%  Similarity=0.277  Sum_probs=44.5

Q ss_pred             CEEEEecCCCCcC----------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           18 MTALVTGGTKGLG----------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        18 k~vlItGas~giG----------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      ++|+|+|| ||||                      +.++++++.+.+... +.++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57899999 8999                      223344444444332 124677889999999999988763     


Q ss_pred             CCccEEEEcccC
Q 041276           75 GKLNILINNVGT   86 (251)
Q Consensus        75 ~~id~lv~~ag~   86 (251)
                       ++|+|||++|.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             69999999985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.08  E-value=0.00072  Score=58.50  Aligned_cols=66  Identities=23%  Similarity=0.216  Sum_probs=41.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEec----------------------cCC---------CHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVC----------------------DAS---------SRAERE   63 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~----------------------D~~---------~~~~~~   63 (251)
                      -.|++|||+||+|+||     ..+++.++..|.++.....                      |+.         +.++.+
T Consensus       219 ~~g~~VlV~GasG~iG-----~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLG-----SYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             CTTCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhh
Confidence            3689999999999999     5555555555544433321                      110         123334


Q ss_pred             HHHHHHHHhcCCCccEEEEccc
Q 041276           64 KLMKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        64 ~~~~~i~~~~~~~id~lv~~ag   85 (251)
                      ++.+.+.+..++++|++++++|
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHHHhCCCceEEEECCC
Confidence            4566666655357999999988

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.07  E-value=0.00029  Score=59.51  Aligned_cols=97  Identities=12%  Similarity=0.051  Sum_probs=53.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH-----------HHHHHHhcCCCccEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL-----------MKQVSSLFNGKLNILI   81 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-----------~~~i~~~~~~~id~lv   81 (251)
                      ..+.+++|+|+|+ |+||     ..+++.+...|.++..+..+....+.+.+.           .+.+.+.. .+.|++|
T Consensus       162 ~~l~~~~V~ViGa-G~iG-----~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~-~~~DvVi  234 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVG-----TNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV-QHADLLI  234 (369)
T ss_dssp             TBBCCCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH-HHCSEEE
T ss_pred             CCCCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH-hCCCEEE
Confidence            3578999999999 9999     777777777776554432211111111110           11222233 4699999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC  138 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~  138 (251)
                      ++++......                    ...+.+..++.|+  +++.||++++..
T Consensus       235 ~~~g~~~~~~--------------------~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          235 GAVLVPGAKA--------------------PKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             ECCC---------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             ECCCCCcccc--------------------chhHHHHHHHhhc--CCCEEEEEecCC
Confidence            9998643111                    0223455666665  348999998754

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.05  E-value=2.8e-05  Score=68.86  Aligned_cols=90  Identities=16%  Similarity=0.183  Sum_probs=55.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH---------HhcC-CCccEEEEc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS---------SLFN-GKLNILINN   83 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~---------~~~~-~~id~lv~~   83 (251)
                      ++++|+++|||| ||+|     .+++..+.+.|.++....-   +.+..+++.+++.         +.++ ..+|++|||
T Consensus       361 ~l~~k~vlV~Ga-GGig-----~aia~~L~~~G~~V~i~~R---~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~  431 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAG-----KALAYGAKEKGAKVVIANR---TYERALELAEAIGGKALSLTDLDNYHPEDGMVLANT  431 (523)
T ss_dssp             -----CEEEECC-SHHH-----HHHHHHHHHHCC-CEEEES---SHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEEC
T ss_pred             ccCCCEEEEECC-cHHH-----HHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHcCCceeeHHHhhhccccCceEEEEC
Confidence            578899999999 5999     8888888888766544432   3444444444321         1110 248999999


Q ss_pred             ccCCCCC----CCCCCCCHHHHHHHHHhhhHHH
Q 041276           84 VGTNYTT----KPTVEYMAEDLSFLMSTNFESA  112 (251)
Q Consensus        84 ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~  112 (251)
                      +|....+    .++.+.+.+.+...+++|+.+.
T Consensus       432 agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          432 TSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             SSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            9975421    3455566677788888888765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=96.97  E-value=0.0011  Score=54.90  Aligned_cols=63  Identities=14%  Similarity=0.228  Sum_probs=37.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------------eccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------------VCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------------~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .+++|||+||+||||     ..+.+.++..|.++...                 .+|.++.+..+++.+.. .  +.++|
T Consensus       145 ~g~~vlV~Ga~ggiG-----~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~-~--~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMG-----HIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREIT-G--GKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-T--TCCEE
T ss_pred             CCCEEEEECCccHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHh-C--CCCCe
Confidence            589999999999999     45555555444433322                 12444333233222221 1  13699


Q ss_pred             EEEEcccC
Q 041276           79 ILINNVGT   86 (251)
Q Consensus        79 ~lv~~ag~   86 (251)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.00078  Score=55.71  Aligned_cols=87  Identities=17%  Similarity=0.183  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------------eccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------------VCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------------~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .|++||||||++|||     ..+.+.++..|.++...                 .+|.++.+..+++.+.. .  +.++|
T Consensus       140 ~g~~vlV~Ga~ggiG-----~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~--~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVG-----LIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEIT-G--GKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHH-----HHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT-T--TCCEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHh-C--CCCce
Confidence            589999999999999     45555555444443322                 12343333333322221 1  13699


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++|+|+|. .                          ..+.+++.++.  .|+++.+++..+
T Consensus       212 ~vi~~~g~-~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~  243 (327)
T 1qor_A          212 VVYDSVGR-D--------------------------TWERSLDCLQR--RGLMVSFGNSSG  243 (327)
T ss_dssp             EEEECSCG-G--------------------------GHHHHHHTEEE--EEEEEECCCTTC
T ss_pred             EEEECCch-H--------------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence            99999982 1                          02344444543  489999987654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.90  E-value=0.001  Score=55.48  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-----------------ccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------------CDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .|++|||+|+++|||     ..+.+.++..|.++....                 +|.++.+++.+.+.++..   +++|
T Consensus       169 ~g~~vlV~Ga~ggiG-----~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~---~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLG-----SLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATD---GGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHT---SCEE
T ss_pred             CCCEEEEECCCchHH-----HHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhC---CCCC
Confidence            589999999999999     555555555554443322                 244433333334433322   3688


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC  138 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~  138 (251)
                      ++|+++|..                          ...+.+++.|++  .|+++.+++..
T Consensus       241 ~vi~~~g~~--------------------------~~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          241 GVINVSVSE--------------------------AAIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             EEEECSSCH--------------------------HHHHHHTTSEEE--EEEEEECCCCT
T ss_pred             EEEECCCcH--------------------------HHHHHHHHHHhc--CCEEEEEeCCC
Confidence            888888731                          023444444543  38999998754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.84  E-value=0.017  Score=47.77  Aligned_cols=106  Identities=12%  Similarity=0.118  Sum_probs=60.8

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHH-HHHHHH--------------HHHHHhcCCCccEEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRA-EREKLM--------------KQVSSLFNGKLNILIN   82 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~--------------~~i~~~~~~~id~lv~   82 (251)
                      ++|+||||+|.+|     ..++..+...+.-...+-.|+.... ...++.              ....+.+ ...|++|+
T Consensus         9 mKI~ViGAaG~VG-----~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al-~gaDvVi~   82 (326)
T 1smk_A            9 FKVAILGAAGGIG-----QPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAAL-TGMDLIIV   82 (326)
T ss_dssp             EEEEEETTTSTTH-----HHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHH-TTCSEEEE
T ss_pred             CEEEEECCCChHH-----HHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHc-CCCCEEEE
Confidence            5799999999999     5666666665522223335654331 111111              1233445 67999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++|....+.    .+.   ...+..|+.....+++.+..+   ...+.++++|....
T Consensus        83 ~ag~~~~~g----~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv~  129 (326)
T 1smk_A           83 PAGVPRKPG----MTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPVN  129 (326)
T ss_dssp             CCCCCCCSS----CCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSHH
T ss_pred             cCCcCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCchH
Confidence            999653121    111   244778888887777776433   22355555544433

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.79  E-value=0.018  Score=47.13  Aligned_cols=101  Identities=8%  Similarity=-0.034  Sum_probs=59.0

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC--CCHHHHHHHHHHHHH----------------hcCCCccEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA--SSRAEREKLMKQVSS----------------LFNGKLNIL   80 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~~i~~----------------~~~~~id~l   80 (251)
                      +|+||||+|.+|     ..++..+...+......-.|+  .. +..+....++..                .+ ...|++
T Consensus         2 KI~IiGAaG~vG-----~~l~~~L~~~~~~~el~L~Di~~~~-~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~-~~aDvV   74 (303)
T 1o6z_A            2 KVSVVGAAGTVG-----AAAGYNIALRDIADEVVFVDIPDKE-DDTVGQAADTNHGIAYDSNTRVRQGGYEDT-AGSDVV   74 (303)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHHTTCCSEEEEECCGGGH-HHHHHHHHHHHHHHTTTCCCEEEECCGGGG-TTCSEE
T ss_pred             EEEEECCCChHH-----HHHHHHHHhCCCCCEEEEEcCCCCh-hhHHHHHHHHHHHHhhCCCcEEEeCCHHHh-CCCCEE
Confidence            699999999999     666666655543233444666  32 222222222222                34 579999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccc
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSV  137 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~  137 (251)
                      |+++|....+    ..+.   .+.+..|+.....+++.+    ++.. .+.++++|..
T Consensus        75 i~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNP  121 (303)
T 1o6z_A           75 VITAGIPRQP----GQTR---IDLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNP  121 (303)
T ss_dssp             EECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSS
T ss_pred             EEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCCh
Confidence            9999965311    1222   345778888777766665    5443 3455554443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.76  E-value=0.0043  Score=53.74  Aligned_cols=58  Identities=16%  Similarity=0.128  Sum_probs=39.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe--------------------eEEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFK--------------------VTGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~--------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      ++|+|+|+| +|++|     ..+++.+.+.+.+                    +..+.+|+++.+++.+++        .
T Consensus         2 ~~k~VlViG-aG~iG-----~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l--------~   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVT-----RPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV--------A   67 (450)
T ss_dssp             CCCEEEEEC-CSTTH-----HHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH--------T
T ss_pred             CCCEEEEEC-CCHHH-----HHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH--------c
Confidence            468999997 79999     4444444433322                    445567888887777665        4


Q ss_pred             CccEEEEcccCC
Q 041276           76 KLNILINNVGTN   87 (251)
Q Consensus        76 ~id~lv~~ag~~   87 (251)
                      ++|+|||+++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            799999999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.67  E-value=0.002  Score=53.95  Aligned_cols=30  Identities=23%  Similarity=0.368  Sum_probs=22.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~   50 (251)
                      .|++|||+||+||||     ..+.+.++..|.++.
T Consensus       170 ~g~~vlV~GasggiG-----~~~~~~a~~~Ga~Vi  199 (351)
T 1yb5_A          170 AGESVLVHGASGGVG-----LAACQIARAYGLKIL  199 (351)
T ss_dssp             TTCEEEEETCSSHHH-----HHHHHHHHHTTCEEE
T ss_pred             CcCEEEEECCCChHH-----HHHHHHHHHCCCEEE
Confidence            589999999999999     555555555554443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.65  E-value=0.0016  Score=54.10  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=22.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~   50 (251)
                      .|++|||+||+||||     ..+.+.++..|.++.
T Consensus       149 ~g~~vlI~Ga~g~iG-----~~~~~~a~~~Ga~Vi  178 (336)
T 4b7c_A          149 NGETVVISGAAGAVG-----SVAGQIARLKGCRVV  178 (336)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHTTCEEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHCCCEEE
Confidence            689999999999999     555555555555443

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.63  E-value=0.0018  Score=54.18  Aligned_cols=62  Identities=11%  Similarity=0.190  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-----------------ccCCCHHHHHHHHHHHHHhcC-CCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------------CDASSRAEREKLMKQVSSLFN-GKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~~-~~i   77 (251)
                      .|++|||+||+||||     ..+++.++..|.++....                 +|..+.+.    .+.+.+..+ +++
T Consensus       162 ~g~~vlV~Ga~ggiG-----~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVG-----TAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDF----SEATLKFTKGAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCH----HHHHHHHTTTSCE
T ss_pred             CCCEEEEECCccHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHH----HHHHHHHhcCCCc
Confidence            589999999999999     555555555554443321                 23333222    223333221 369


Q ss_pred             cEEEEcccC
Q 041276           78 NILINNVGT   86 (251)
Q Consensus        78 d~lv~~ag~   86 (251)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.60  E-value=0.0029  Score=52.94  Aligned_cols=31  Identities=23%  Similarity=0.236  Sum_probs=23.1

Q ss_pred             CC--CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEE
Q 041276           16 QG--MTALVTGGTKGLGNEAELNECLREWKTKCF-KVTG   51 (251)
Q Consensus        16 ~~--k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~   51 (251)
                      .|  ++|||+||+||||     ..+.+.++..|. ++..
T Consensus       158 ~g~~~~vlI~GasggiG-----~~~~~~a~~~Ga~~Vi~  191 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACG-----SVAGQIGHFLGCSRVVG  191 (357)
T ss_dssp             TTSCCEEEESSTTBHHH-----HHHHHHHHHTTCSEEEE
T ss_pred             CCCccEEEEECCCcHHH-----HHHHHHHHHCCCCeEEE
Confidence            46  9999999999999     666666666665 4443

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.58  E-value=0.005  Score=51.20  Aligned_cols=66  Identities=23%  Similarity=0.322  Sum_probs=41.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHH------------HHHHHHHHhcCC-CccEEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE------------KLMKQVSSLFNG-KLNILIN   82 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~------------~~~~~i~~~~~~-~id~lv~   82 (251)
                      .|++|||+||+|+||     ..+.+.++..|.++.....+-...+.++            .+.+.+.+..++ ++|++++
T Consensus       159 ~g~~VlV~Gasg~iG-----~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid  233 (342)
T 4eye_A          159 AGETVLVLGAAGGIG-----TAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVD  233 (342)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEE
Confidence            589999999999999     6666666666666554433222222221            233444444323 6999999


Q ss_pred             cccC
Q 041276           83 NVGT   86 (251)
Q Consensus        83 ~ag~   86 (251)
                      ++|.
T Consensus       234 ~~g~  237 (342)
T 4eye_A          234 PIGG  237 (342)
T ss_dssp             SCC-
T ss_pred             CCch
Confidence            9984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.57  E-value=0.023  Score=46.97  Aligned_cols=137  Identities=11%  Similarity=0.035  Sum_probs=81.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----eeEEEeccCCC---HHHHH----HHHH-------------HHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCF-----KVTGSVCDASS---RAERE----KLMK-------------QVSS   71 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~-----~~~~~~~D~~~---~~~~~----~~~~-------------~i~~   71 (251)
                      .++|+||||+|.+|     ..++..+...+.     ....+-.|..+   .+..+    ++.+             ...+
T Consensus         5 ~~KI~ViGaaG~VG-----~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~   79 (329)
T 1b8p_A            5 PMRVAVTGAAGQIC-----YSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMT   79 (329)
T ss_dssp             CEEEEESSTTSHHH-----HHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHH
T ss_pred             CCEEEEECCCChHH-----HHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHH
Confidence            36899999999999     666666665542     02344467652   22121    1211             1233


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc--------c-C
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV--------L-S  142 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~--------~-~  142 (251)
                      .+ ...|++|++||....+    ..+.   .+.+..|+.....+++.+..+-  ...++||++|.....        . +
T Consensus        80 al-~~aD~Vi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~~~  149 (329)
T 1b8p_A           80 AF-KDADVALLVGARPRGP----GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSAPS  149 (329)
T ss_dssp             HT-TTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             Hh-CCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHcCC
Confidence            44 5799999999965311    2222   3467788887777777663321  134689999875421        1 2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHc
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWA  168 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~  168 (251)
                      .+..-.|+.++.-...+...++..+.
T Consensus       150 ~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          150 LPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            23333477776656667777887764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.50  E-value=0.0035  Score=52.69  Aligned_cols=89  Identities=19%  Similarity=0.205  Sum_probs=51.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC---H--HHHHH----------HHHHHHHhcCCCcc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS---R--AEREK----------LMKQVSSLFNGKLN   78 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~--~~~~~----------~~~~i~~~~~~~id   78 (251)
                      .++|++|||+|+ ||||     ..+.+.++..|.++...  |.++   .  +..++          +.+++.+.. +++|
T Consensus       178 ~~~g~~VlV~Ga-G~vG-----~~~~q~a~~~Ga~Vi~~--~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~-~~~d  248 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIG-----VLFTLLFRTYGLEVWMA--NRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSV-GKFD  248 (366)
T ss_dssp             SSTTCEEEEESC-HHHH-----HHHHHHHHHHTCEEEEE--ESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHH-CCEE
T ss_pred             cCCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEE--eCCccchHHHHHHHHhCCceechHHHHHHHHHhC-CCCC
Confidence            455999999999 9999     55566565555544333  3322   1  11111          112222222 4699


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHH-HHHHHHHHhCCCceEEEeccccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS-QLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      ++|+++|...                          .. +.+++.|+.  .|++|+++...+
T Consensus       249 ~vid~~g~~~--------------------------~~~~~~~~~l~~--~G~iv~~g~~~~  282 (366)
T 2cdc_A          249 VIIDATGADV--------------------------NILGNVIPLLGR--NGVLGLFGFSTS  282 (366)
T ss_dssp             EEEECCCCCT--------------------------HHHHHHGGGEEE--EEEEEECSCCCS
T ss_pred             EEEECCCChH--------------------------HHHHHHHHHHhc--CCEEEEEecCCC
Confidence            9999988532                          12 444555543  489999876543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.49  E-value=0.027  Score=46.24  Aligned_cols=133  Identities=11%  Similarity=0.099  Sum_probs=75.2

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC--CCH--HH-HHHHHHH----------------HHHhcCCCc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA--SSR--AE-REKLMKQ----------------VSSLFNGKL   77 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~--~~-~~~~~~~----------------i~~~~~~~i   77 (251)
                      +|+||||+|.+|     ..+...+...+......-.|+  ...  +. ...+-+.                +.+.+ .+.
T Consensus         2 KI~V~GaaG~vG-----~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al-~ga   75 (313)
T 1hye_A            2 KVTIIGASGRVG-----SATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII-DES   75 (313)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG-TTC
T ss_pred             EEEEECCCChhH-----HHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHh-CCC
Confidence            689999999999     667777766553333444565  321  11 1111111                12234 579


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc--------CCCCChhh
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL--------STNLGTIY  149 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~--------~~~~~~~Y  149 (251)
                      |++||+||....+    ..+   ....+..|+.....+++.+..+    ..+.++++|......        +.+..-.+
T Consensus        76 D~Vi~~Ag~~~~~----g~~---r~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~p~~rvi  144 (313)
T 1hye_A           76 DVVIITSGVPRKE----GMS---RMDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKFERNQVF  144 (313)
T ss_dssp             SEEEECCSCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCCCTTSEE
T ss_pred             CEEEECCCCCCCC----CCc---HHHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCcChhcEE
Confidence            9999999965311    122   2455888888888888776443    335666666544321        13333344


Q ss_pred             HH-hHHHHHHHHHHHHHHHc
Q 041276          150 AA-TKGAMNQLAKNLACEWA  168 (251)
Q Consensus       150 ~~-sK~a~~~~~~~la~e~~  168 (251)
                      +. ...-...+...+++.+.
T Consensus       145 G~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          145 GLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             ECTTHHHHHHHHHHHHHHHT
T ss_pred             EeCccHHHHHHHHHHHHHhC
Confidence            54 44345555666666654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.34  E-value=0.0099  Score=47.78  Aligned_cols=67  Identities=18%  Similarity=0.263  Sum_probs=45.9

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH----------hcC-CCccEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS----------LFN-GKLNILI   81 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~----------~~~-~~id~lv   81 (251)
                      .++++|+++|+|+ ||+|     ..++..+...|.++..+  | .+.+..+++.+++..          ... +++|+||
T Consensus       115 ~~l~~k~vlViGa-Gg~g-----~a~a~~L~~~G~~V~v~--~-R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivV  185 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGAS-----RGVLLPLLSLDCAVTIT--N-RTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLII  185 (271)
T ss_dssp             CCCTTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEE--C-SSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEE
T ss_pred             cCcCCCEEEEECC-cHHH-----HHHHHHHHHcCCEEEEE--E-CCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEE
Confidence            3578999999998 6899     78888888887555443  4 344555555544321          111 3799999


Q ss_pred             EcccCCC
Q 041276           82 NNVGTNY   88 (251)
Q Consensus        82 ~~ag~~~   88 (251)
                      ++++...
T Consensus       186 n~t~~~~  192 (271)
T 1nyt_A          186 NATSSGI  192 (271)
T ss_dssp             ECCSCGG
T ss_pred             ECCCCCC
Confidence            9999754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.31  E-value=0.0055  Score=51.23  Aligned_cols=62  Identities=18%  Similarity=0.334  Sum_probs=38.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-----------------ccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------------CDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .|++|||+||+||||     ..+.+.++..|.++....                 .|..+.+..+.+    .+..++++|
T Consensus       167 ~g~~VlV~Gg~g~iG-----~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~----~~~~~~g~D  237 (353)
T 4dup_A          167 EGESVLIHGGTSGIG-----TTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVI----KAETGQGVD  237 (353)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH----HHHHSSCEE
T ss_pred             CCCEEEEEcCCCHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHH----HHHhCCCce
Confidence            689999999999999     556666665555544332                 222232222222    222225799


Q ss_pred             EEEEcccC
Q 041276           79 ILINNVGT   86 (251)
Q Consensus        79 ~lv~~ag~   86 (251)
                      ++++++|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.28  E-value=0.012  Score=48.76  Aligned_cols=66  Identities=17%  Similarity=0.178  Sum_probs=40.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH-------------HHHHHHHhcC-CCccEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREK-------------LMKQVSSLFN-GKLNILI   81 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------------~~~~i~~~~~-~~id~lv   81 (251)
                      .|++|||+||+++||     ..+.+.++..|.++.....+-...+.+++             +.+.+.+..+ .++|+++
T Consensus       144 ~g~~VlV~Ga~g~iG-----~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          144 RNDVLLVNACGSAIG-----HLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEeCCccHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            589999999999999     66666666666665544332222222221             2233333321 3699999


Q ss_pred             EcccC
Q 041276           82 NNVGT   86 (251)
Q Consensus        82 ~~ag~   86 (251)
                      +++|.
T Consensus       219 d~~g~  223 (340)
T 3gms_A          219 DSIGG  223 (340)
T ss_dssp             ESSCH
T ss_pred             ECCCC
Confidence            99884

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.24  E-value=0.021  Score=46.95  Aligned_cols=69  Identities=14%  Similarity=0.142  Sum_probs=46.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHh------------------
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSL------------------   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~------------------   72 (251)
                      ..++++|++||+|+ ||+|     ..++..+...|. ++..+.-+-.+.+..+++.+++...                  
T Consensus       149 ~~~l~gk~~lVlGa-GG~g-----~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~  222 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAA-----TAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK  222 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             CCCccCCEEEEECC-ChHH-----HHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence            35688999999998 6999     777777777775 5655544422355555555544321                  


Q ss_pred             -cCCCccEEEEcccCC
Q 041276           73 -FNGKLNILINNVGTN   87 (251)
Q Consensus        73 -~~~~id~lv~~ag~~   87 (251)
                       . ...|+|||+....
T Consensus       223 ~l-~~aDiIINaTp~G  237 (315)
T 3tnl_A          223 EI-AESVIFTNATGVG  237 (315)
T ss_dssp             HH-HTCSEEEECSSTT
T ss_pred             hh-cCCCEEEECccCC
Confidence             1 3689999988754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.13  E-value=0.0047  Score=51.32  Aligned_cols=28  Identities=18%  Similarity=0.109  Sum_probs=20.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFK   48 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~   48 (251)
                      .|++|||+||+||||     ..+.+.++..|.+
T Consensus       155 ~g~~vlI~Ga~g~iG-----~~~~~~a~~~G~~  182 (345)
T 2j3h_A          155 EGETVYVSAASGAVG-----QLVGQLAKMMGCY  182 (345)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHTTCE
T ss_pred             CCCEEEEECCCcHHH-----HHHHHHHHHCCCE
Confidence            589999999999999     5555555555543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.11  E-value=0.007  Score=52.61  Aligned_cols=62  Identities=10%  Similarity=0.134  Sum_probs=38.6

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CC-------------------eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTK-CF-------------------KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ..++++|+|+|+|+ ||+|     ..++..+.+. +.                   .+..+.+|+.+.+++.+++     
T Consensus        18 ~~~l~~k~VlIiGA-GgiG-----~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l-----   86 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVA-----QPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVL-----   86 (467)
T ss_dssp             -----CEEEEEECC-STTH-----HHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHH-----
T ss_pred             ccCCCCCEEEEECC-hHHH-----HHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHH-----
Confidence            34567899999997 9999     3333333332 11                   2344567777777666655     


Q ss_pred             hcCCCccEEEEcccCC
Q 041276           72 LFNGKLNILINNVGTN   87 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~   87 (251)
                         .++|+|||+++..
T Consensus        87 ---~~~DvVIn~tp~~   99 (467)
T 2axq_A           87 ---ADNDVVISLIPYT   99 (467)
T ss_dssp             ---HTSSEEEECSCGG
T ss_pred             ---cCCCEEEECCchh
Confidence               3699999999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.08  E-value=0.0096  Score=49.47  Aligned_cols=86  Identities=15%  Similarity=0.162  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-----------------eccCCCHHHHHHHHHHHHHhcC-CCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-----------------VCDASSRAEREKLMKQVSSLFN-GKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-----------------~~D~~~~~~~~~~~~~i~~~~~-~~i   77 (251)
                      .+++|||+|+++|||     ..+.+.++..|.++...                 .+|.++.+.    .+.+.+..+ .++
T Consensus       166 ~g~~vlV~Gasg~iG-----~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~----~~~~~~~~~~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVS-----VAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDW----PKEVRRLTGGKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTH----HHHHHHHTTTTCE
T ss_pred             CCCEEEEECCCchHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccH----HHHHHHHhCCCCc
Confidence            589999999999999     44444444444333222                 134444321    222322221 379


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      |++|+++| ..                          ..+.+++.++.  .|+++.+++..+
T Consensus       237 d~vi~~~g-~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  269 (343)
T 2eih_A          237 DKVVDHTG-AL--------------------------YFEGVIKATAN--GGRIAIAGASSG  269 (343)
T ss_dssp             EEEEESSC-SS--------------------------SHHHHHHHEEE--EEEEEESSCCCS
T ss_pred             eEEEECCC-HH--------------------------HHHHHHHhhcc--CCEEEEEecCCC
Confidence            99999998 22                          02344455554  389999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.05  E-value=0.0092  Score=49.66  Aligned_cols=31  Identities=29%  Similarity=0.336  Sum_probs=23.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTK-CFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~~~~~   51 (251)
                      .+++|||+|++||||     ..+.+.++.. |.++..
T Consensus       170 ~g~~vlV~Gagg~iG-----~~~~~~a~~~~Ga~Vi~  201 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLG-----TMAVQIAKAVSGATIIG  201 (347)
T ss_dssp             TTCEEEEETTTSHHH-----HHHHHHHHHHTCCEEEE
T ss_pred             CCCEEEEECCCccHH-----HHHHHHHHHcCCCeEEE
Confidence            689999999999999     6666666666 655443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=95.96  E-value=0.0068  Score=50.17  Aligned_cols=31  Identities=19%  Similarity=0.133  Sum_probs=23.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|++|||+||+||||     ..+.+.++..|.++..
T Consensus       148 ~g~~vlV~Ga~g~iG-----~~~~~~a~~~Ga~Vi~  178 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVG-----LILNQLLKMKGAHTIA  178 (334)
T ss_dssp             TTCEEEESSTTBHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEE
Confidence            689999999999999     5555555555555433

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=95.94  E-value=0.0076  Score=42.91  Aligned_cols=60  Identities=17%  Similarity=0.238  Sum_probs=36.3

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------------EEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------------~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .++++.++|+|+ |++|     ..+++.+...+.++.                  ++..|.++.+.++++      .. +
T Consensus         3 ~~~~~~v~I~G~-G~iG-----~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~------~~-~   69 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFG-----GSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSL------GI-R   69 (144)
T ss_dssp             ---CCSEEEECC-SHHH-----HHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTT------TG-G
T ss_pred             CCcCCcEEEECC-CHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhc------CC-C
Confidence            356788999998 9999     555666655443333                  344566554433322      12 5


Q ss_pred             CccEEEEcccC
Q 041276           76 KLNILINNVGT   86 (251)
Q Consensus        76 ~id~lv~~ag~   86 (251)
                      +.|++|++++.
T Consensus        70 ~~d~vi~~~~~   80 (144)
T 2hmt_A           70 NFEYVIVAIGA   80 (144)
T ss_dssp             GCSEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999988874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=95.90  E-value=0.0075  Score=49.74  Aligned_cols=62  Identities=26%  Similarity=0.311  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-----------------ccCCCHHHHHHHHHHHHHhcC-CCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-----------------CDASSRAEREKLMKQVSSLFN-GKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~~~~~~~~~~~~~i~~~~~-~~i   77 (251)
                      .|++|||+||+|+||     ..+.+.++..|.++....                 .|..+.+    +.+.+.+..+ .++
T Consensus       140 ~g~~VlV~Ga~g~iG-----~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~----~~~~~~~~~~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVG-----SLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHED----VAKRVLELTDGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSC----HHHHHHHHTTTCCE
T ss_pred             CCCEEEEEcCCcHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcc----HHHHHHHHhCCCCc
Confidence            589999999999999     555555555554443322                 1222222    2233333221 369


Q ss_pred             cEEEEcccC
Q 041276           78 NILINNVGT   86 (251)
Q Consensus        78 d~lv~~ag~   86 (251)
                      |++++++|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999884

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=95.88  E-value=0.015  Score=48.66  Aligned_cols=29  Identities=28%  Similarity=0.326  Sum_probs=21.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKV   49 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~   49 (251)
                      .|++|||+||+|+||     ..+.+.++..|.++
T Consensus       163 ~g~~VlV~Ga~G~iG-----~~~~q~a~~~Ga~V  191 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTG-----QFAMQLSKKAKCHV  191 (362)
T ss_dssp             TTCEEEETTTTBTTH-----HHHHHHHHHTTCEE
T ss_pred             CCCEEEEeCCCcHHH-----HHHHHHHHhCCCEE
Confidence            589999999999999     55555555555543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.66  E-value=0.016  Score=48.10  Aligned_cols=32  Identities=25%  Similarity=0.447  Sum_probs=23.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|++|||+||+|+||     ..+.+.++..|.++...
T Consensus       150 ~g~~VlV~Ga~g~iG-----~~~~q~a~~~Ga~Vi~~  181 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVG-----HVAIQIALARGARVFAT  181 (343)
T ss_dssp             TTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEecCCCHHH-----HHHHHHHHHCCCEEEEE
Confidence            689999999999999     55556565556554443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=95.66  E-value=0.017  Score=48.00  Aligned_cols=31  Identities=26%  Similarity=0.377  Sum_probs=22.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|++|||+||+|++|     ..+.+-++..|.++..
T Consensus       150 ~g~~VlV~gg~G~vG-----~~a~qla~~~Ga~Vi~  180 (346)
T 3fbg_A          150 EGKTLLIINGAGGVG-----SIATQIAKAYGLRVIT  180 (346)
T ss_dssp             TTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEcCCCHHH-----HHHHHHHHHcCCEEEE
Confidence            689999999999999     5555555555554433

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.64  E-value=0.028  Score=46.57  Aligned_cols=28  Identities=25%  Similarity=0.271  Sum_probs=19.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKV   49 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~   49 (251)
                      .|++|||+|+ +|||     ..+.+.++..|.++
T Consensus       164 ~g~~VlV~Ga-G~vG-----~~~~~~a~~~Ga~V  191 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLG-----HVAVQYAKAMGLNV  191 (339)
T ss_dssp             TTCEEEEECC-STTH-----HHHHHHHHHTTCEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCEE
Confidence            5899999999 8899     55555555555443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.43  E-value=0.71  Score=40.62  Aligned_cols=148  Identities=9%  Similarity=0.017  Sum_probs=90.8

Q ss_pred             cCCCCCEEEEecCCCC-cCcHHHHHHHHHHHHhcCCeeEEEeccCC-CHHHHHHHHHHHH-HhcCCCccEEEEcccCCCC
Q 041276           13 WSLQGMTALVTGGTKG-LGNEAELNECLREWKTKCFKVTGSVCDAS-SRAEREKLMKQVS-SLFNGKLNILINNVGTNYT   89 (251)
Q Consensus        13 ~~l~~k~vlItGas~g-iG~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~-~~~~~~id~lv~~ag~~~~   89 (251)
                      ....|.+.++....++ ++     ..+.+.+.+.|.++..+..+-. +.+.+.+.+.+.. ... +.++.|+|..+....
T Consensus        46 ~~~~g~wlv~~~~~~~~~~-----~~l~~~L~~~G~~v~~v~~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~l~~~~~~  119 (525)
T 3qp9_A           46 AGLSGRWLVVVPEDRSAEA-----APVLAALSGAGADPVQLDVSPLGDRQRLAATLGEALAAAG-GAVDGVLSLLAWDES  119 (525)
T ss_dssp             -CCCSEEEEEEEGGGCTTT-----HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHHHTT-SCCSEEEECGGGCCC
T ss_pred             CCCCCeEEEEECCCcchHH-----HHHHHHHHhcCCeEEEEeCCCCCCHHHHHHHHHhhhhccc-CCCCeEEEcccCCCC
Confidence            3455666666654432 77     7788899999988887776544 6777777776433 343 689999999887542


Q ss_pred             CCCCC-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHc
Q 041276           90 TKPTV-EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA  168 (251)
Q Consensus        90 ~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  168 (251)
                      ..+.. ...        ...+.+.+.++|++..   .....++..++..+..... ....-...++++-+|.|+++.|+.
T Consensus       120 ~~~~~~~~~--------~~g~~~~l~l~qal~~---~~~~~~l~~vT~ga~~~~~-~~~~~~p~~a~l~Gl~r~~~~E~p  187 (525)
T 3qp9_A          120 AHPGHPAPF--------TRGTGATLTLVQALED---AGVAAPLWCVTHGAVSVGR-ADHVTSPAQAMVWGMGRVAALEHP  187 (525)
T ss_dssp             BCTTSCTTC--------BHHHHHHHHHHHHHHH---TTCCSCEEEEEESCCCCBT-TBCCSCHHHHHHHHHHHHHHHHST
T ss_pred             ccccccccc--------cchHHHHHHHHHHHHh---cCCCCcEEEEECCCEeCCC-CCCCCCHHHHHHHHHHHHHHHhCC
Confidence            21111 111        1245667777777643   2223567777654432221 111235678999999999999976


Q ss_pred             cCCeEEEEEe
Q 041276          169 RDNIRINSVA  178 (251)
Q Consensus       169 ~~~i~v~~i~  178 (251)
                      ...++...+-
T Consensus       188 ~~~~~~vDl~  197 (525)
T 3qp9_A          188 ERWGGLIDLP  197 (525)
T ss_dssp             TTEEEEEEEC
T ss_pred             CceEEEEEcC
Confidence            5444455543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=95.15  E-value=0.032  Score=46.41  Aligned_cols=31  Identities=16%  Similarity=0.119  Sum_probs=22.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      +++|||+||+|+||     ..+.+-++..|.++...
T Consensus       165 ~~~vli~gg~g~vG-----~~a~qla~~~Ga~Vi~~  195 (349)
T 3pi7_A          165 EKAFVMTAGASQLC-----KLIIGLAKEEGFRPIVT  195 (349)
T ss_dssp             CSEEEESSTTSHHH-----HHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEE
Confidence            38999999999999     55555555556555443

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.11  E-value=0.024  Score=45.89  Aligned_cols=66  Identities=12%  Similarity=0.114  Sum_probs=43.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHh-----------------cC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSL-----------------FN   74 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~-----------------~~   74 (251)
                      .++++|+++|+|+ ||+|     ..++..+...|. ++..+.-   +.+..+++.+++...                 . 
T Consensus       123 ~~l~~k~vlVlGa-GG~g-----~aia~~L~~~G~~~v~i~~R---~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l-  192 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVG-----NAVAYALVTHGVQKLQVADL---DTSRAQALADVINNAVGREAVVGVDARGIEDVI-  192 (283)
T ss_dssp             TTCCCSEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEECS---SHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHH-
T ss_pred             cCcCCCEEEEECC-cHHH-----HHHHHHHHHCCCCEEEEEEC---CHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHH-
Confidence            4678999999998 7999     777777777765 4554433   344444444443321                 1 


Q ss_pred             CCccEEEEcccCCC
Q 041276           75 GKLNILINNVGTNY   88 (251)
Q Consensus        75 ~~id~lv~~ag~~~   88 (251)
                      ...|+|||+.....
T Consensus       193 ~~~DiVInaTp~Gm  206 (283)
T 3jyo_A          193 AAADGVVNATPMGM  206 (283)
T ss_dssp             HHSSEEEECSSTTS
T ss_pred             hcCCEEEECCCCCC
Confidence            25799999887543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.07  E-value=0.038  Score=46.34  Aligned_cols=89  Identities=26%  Similarity=0.235  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHH-HH----------HHHHHHhcCCCccEEEEcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE-KL----------MKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~----------~~~i~~~~~~~id~lv~~a   84 (251)
                      .|++|||+|+ |+||     ..+++.++..|.++..+..+-...+... ++          .+.+.+.. +++|++++++
T Consensus       187 ~g~~VlV~Ga-G~vG-----~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~D~vid~~  259 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLG-----HVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAA-GTLDGIIDTV  259 (366)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTT-TCEEEEEECC
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhh-CCCCEEEECC
Confidence            6899999996 9999     5666666655655443321111111111 00          01233333 5799999999


Q ss_pred             cCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           85 GTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        85 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      |...                          .++..++.|+.  .|+++.+++...
T Consensus       260 g~~~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~  286 (366)
T 1yqd_A          260 SAVH--------------------------PLLPLFGLLKS--HGKLILVGAPEK  286 (366)
T ss_dssp             SSCC--------------------------CSHHHHHHEEE--EEEEEECCCCSS
T ss_pred             CcHH--------------------------HHHHHHHHHhc--CCEEEEEccCCC
Confidence            8532                          01234455544  489999987543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.02  E-value=0.11  Score=41.70  Aligned_cols=67  Identities=12%  Similarity=0.184  Sum_probs=44.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH----------hcC-CCccEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS----------LFN-GKLNILI   81 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~----------~~~-~~id~lv   81 (251)
                      .++++|+++|+|+ ||+|     ..++..+...|.++..+.-   +.+..+++.+++..          ... ++.|+||
T Consensus       115 ~~~~~~~vlvlGa-Gg~g-----~a~a~~L~~~G~~v~v~~R---~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivI  185 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGAT-----KGVLLPLLQAQQNIVLANR---TFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVI  185 (272)
T ss_dssp             CCCTTCEEEEECC-SHHH-----HTTHHHHHHTTCEEEEEES---SHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEE
T ss_pred             CCcCCCEEEEECC-cHHH-----HHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEE
Confidence            3578999999998 7899     7777778777755554433   34445555544421          111 3799999


Q ss_pred             EcccCCC
Q 041276           82 NNVGTNY   88 (251)
Q Consensus        82 ~~ag~~~   88 (251)
                      ++++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9999754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.00  E-value=0.033  Score=45.37  Aligned_cols=66  Identities=17%  Similarity=0.263  Sum_probs=44.2

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHH-------------HHHHhcCCCcc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMK-------------QVSSLFNGKLN   78 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~-------------~i~~~~~~~id   78 (251)
                      .++.+|+|+|+|+ ||+|     ..++..+...|. ++..+.-+   .+..+++.+             .+.+.. .+.|
T Consensus       137 ~~l~~~~vlVlGa-Gg~g-----~aia~~L~~~G~~~V~v~nR~---~~ka~~la~~~~~~~~~~~~~~~~~~~~-~~aD  206 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGA-----RGIYFSLLSTAAERIDMANRT---VEKAERLVREGDERRSAYFSLAEAETRL-AEYD  206 (297)
T ss_dssp             CCCTTCEEEEECC-SHHH-----HHHHHHHHTTTCSEEEEECSS---HHHHHHHHHHSCSSSCCEECHHHHHHTG-GGCS
T ss_pred             CCCCCCEEEEECc-HHHH-----HHHHHHHHHCCCCEEEEEeCC---HHHHHHHHHHhhhccCceeeHHHHHhhh-ccCC
Confidence            3578999999998 7899     778888887775 55544332   333333322             333444 5799


Q ss_pred             EEEEcccCCC
Q 041276           79 ILINNVGTNY   88 (251)
Q Consensus        79 ~lv~~ag~~~   88 (251)
                      +||++.+...
T Consensus       207 ivIn~t~~~~  216 (297)
T 2egg_A          207 IIINTTSVGM  216 (297)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999998754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.97  E-value=0.071  Score=44.23  Aligned_cols=30  Identities=27%  Similarity=0.213  Sum_probs=22.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~   51 (251)
                      .|++|||+|+ |++|     ..+.+.++..|. ++..
T Consensus       167 ~g~~VlV~Ga-G~vG-----~~~~q~a~~~Ga~~Vi~  197 (348)
T 2d8a_A          167 SGKSVLITGA-GPLG-----LLGIAVAKASGAYPVIV  197 (348)
T ss_dssp             TTCCEEEECC-SHHH-----HHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCEEEE
Confidence            7899999999 9999     666666666555 4443

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=94.95  E-value=0.076  Score=43.53  Aligned_cols=71  Identities=13%  Similarity=0.124  Sum_probs=46.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHhcC----------------
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSLFN----------------   74 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~----------------   74 (251)
                      ..++++|++||+|+ ||+|     ..++..+...|. ++..+.-+-...+..+++.+++...++                
T Consensus       143 ~~~l~gk~~lVlGA-GGaa-----raia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~  216 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAA-----TAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE  216 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             CCCcCCCEEEEECc-CHHH-----HHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence            35678999999997 7888     777777777765 555554443335555555554433210                


Q ss_pred             --CCccEEEEcccCCC
Q 041276           75 --GKLNILINNVGTNY   88 (251)
Q Consensus        75 --~~id~lv~~ag~~~   88 (251)
                        ...|+|||+.+...
T Consensus       217 ~l~~~DiIINaTp~Gm  232 (312)
T 3t4e_A          217 ALASADILTNGTKVGM  232 (312)
T ss_dssp             HHHHCSEEEECSSTTS
T ss_pred             hccCceEEEECCcCCC
Confidence              24789999887653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=94.91  E-value=0.038  Score=46.33  Aligned_cols=65  Identities=17%  Similarity=0.178  Sum_probs=42.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC--HHHHHHHH-----------HHHHHhcCCCccEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS--RAEREKLM-----------KQVSSLFNGKLNIL   80 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-----------~~i~~~~~~~id~l   80 (251)
                      .+++++|+|+|+ ||+|     ..+++.+...|.++..  .|.+.  .+.+.+..           +.+.+.. .+.|++
T Consensus       164 ~l~~~~VlViGa-GgvG-----~~aa~~a~~~Ga~V~v--~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvV  234 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVG-----TEAAKMAVGLGAQVQI--FDINVERLSYLETLFGSRVELLYSNSAEIETAV-AEADLL  234 (361)
T ss_dssp             TBCCCEEEEECC-SHHH-----HHHHHHHHHTTCEEEE--EESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH-HTCSEE
T ss_pred             CCCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEE--EeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHH-cCCCEE
Confidence            467899999999 9999     7777888877765444  44432  22222221           1222333 469999


Q ss_pred             EEcccCC
Q 041276           81 INNVGTN   87 (251)
Q Consensus        81 v~~ag~~   87 (251)
                      |++++..
T Consensus       235 I~~~~~~  241 (361)
T 1pjc_A          235 IGAVLVP  241 (361)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9999864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=94.85  E-value=0.038  Score=47.81  Aligned_cols=66  Identities=20%  Similarity=0.236  Sum_probs=39.7

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe----------------------cc--------CCCHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV----------------------CD--------ASSRAEREK   64 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~----------------------~D--------~~~~~~~~~   64 (251)
                      -.|++|||+||+|++|     ..+++-++..|.++..+.                      .|        ..+.+++++
T Consensus       227 ~~g~~VlV~GasG~vG-----~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          227 KQGDNVLIWGASGGLG-----SYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             CTTCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCCEEEEECCCCHHH-----HHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHH
Confidence            3689999999999999     334444444443332221                      01        134455556


Q ss_pred             HHHHHHHhcC-CCccEEEEccc
Q 041276           65 LMKQVSSLFN-GKLNILINNVG   85 (251)
Q Consensus        65 ~~~~i~~~~~-~~id~lv~~ag   85 (251)
                      +.+.+.+..+ .++|+++.++|
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCC
Confidence            6666666542 36888888877

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=94.76  E-value=0.076  Score=44.54  Aligned_cols=33  Identities=12%  Similarity=0.198  Sum_probs=25.1

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      ..|++|||.||+|++|     ..+.+-.+..|.++...
T Consensus       163 ~~g~~VlV~Ga~G~vG-----~~a~qla~~~Ga~Vi~~  195 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATA-----TVTMQMLRLSGYIPIAT  195 (371)
T ss_dssp             SSCCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCcEEEEECCCcHHH-----HHHHHHHHHCCCEEEEE
Confidence            4789999999999999     66666666666665543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=94.63  E-value=0.042  Score=46.33  Aligned_cols=68  Identities=12%  Similarity=0.038  Sum_probs=43.0

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH-----------HHHHHHhcCCCccEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL-----------MKQVSSLFNGKLNILI   81 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-----------~~~i~~~~~~~id~lv   81 (251)
                      ..+.+++|+|+|+ |+||     ..+++.+...|.++..+..+....+.+++.           ...+.+.. .+.|++|
T Consensus       164 ~~l~g~~V~ViG~-G~iG-----~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l-~~aDvVi  236 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAG-----YNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAV-KRADLVI  236 (377)
T ss_dssp             TTBCCCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHH-HHCSEEE
T ss_pred             CCCCCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHH-cCCCEEE
Confidence            3688999999998 9999     778888887776554443221111222221           12233333 4689999


Q ss_pred             EcccCC
Q 041276           82 NNVGTN   87 (251)
Q Consensus        82 ~~ag~~   87 (251)
                      ++++..
T Consensus       237 ~~~~~p  242 (377)
T 2vhw_A          237 GAVLVP  242 (377)
T ss_dssp             ECCCCT
T ss_pred             ECCCcC
Confidence            998854

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.62  E-value=0.094  Score=43.79  Aligned_cols=30  Identities=27%  Similarity=0.180  Sum_probs=21.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|++|||+| +|++|     ..+.+-++..|.++..
T Consensus       189 ~g~~VlV~G-~G~vG-----~~a~qla~~~Ga~Vi~  218 (363)
T 3uog_A          189 AGDRVVVQG-TGGVA-----LFGLQIAKATGAEVIV  218 (363)
T ss_dssp             TTCEEEEES-SBHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEC-CCHHH-----HHHHHHHHHcCCEEEE
Confidence            589999999 89999     5555555555554443

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=94.51  E-value=0.083  Score=44.32  Aligned_cols=32  Identities=25%  Similarity=0.337  Sum_probs=24.2

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      -.|++|||+||+|+||     ..+.+.++..|.++..
T Consensus       182 ~~g~~VlV~Ga~G~vG-----~~~~qla~~~Ga~Vi~  213 (375)
T 2vn8_A          182 CTGKRVLILGASGGVG-----TFAIQVMKAWDAHVTA  213 (375)
T ss_dssp             CTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCCEEEEECCCCHHH-----HHHHHHHHhCCCEEEE
Confidence            3689999999999999     6666666666655543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=94.42  E-value=0.049  Score=44.26  Aligned_cols=32  Identities=19%  Similarity=0.321  Sum_probs=24.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|++|||+|++|++|     ..+.+.++..|.++...
T Consensus       125 ~g~~vlV~Ga~G~vG-----~~~~~~a~~~Ga~Vi~~  156 (302)
T 1iz0_A          125 PGEKVLVQAAAGALG-----TAAVQVARAMGLRVLAA  156 (302)
T ss_dssp             TTCEEEESSTTBHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECCCcHHH-----HHHHHHHHHCCCEEEEE
Confidence            589999999999999     66666666666655444

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=94.12  E-value=0.09  Score=37.27  Aligned_cols=57  Identities=16%  Similarity=0.167  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------------EEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------GSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------------~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ..+.++|+|+ |.+|     ..+++.+.+.|.++.                  ++..|.++++.++++      .. .+.
T Consensus         5 ~~~~v~I~G~-G~iG-----~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~------~~-~~~   71 (141)
T 3llv_A            5 GRYEYIVIGS-EAAG-----VGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSL------DL-EGV   71 (141)
T ss_dssp             -CCSEEEECC-SHHH-----HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHS------CC-TTC
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhC------Cc-ccC
Confidence            4578999998 6699     666666665554443                  344566665544432      11 467


Q ss_pred             cEEEEccc
Q 041276           78 NILINNVG   85 (251)
Q Consensus        78 d~lv~~ag   85 (251)
                      |.+|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            88877666

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=94.04  E-value=0.23  Score=41.30  Aligned_cols=62  Identities=16%  Similarity=0.126  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-eEEE--------------------eccCCCHHHHHHHHHHHHHhc-
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFK-VTGS--------------------VCDASSRAEREKLMKQVSSLF-   73 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-~~~~--------------------~~D~~~~~~~~~~~~~i~~~~-   73 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|.+ +...                    ..|-.+.+.   +.+++++.. 
T Consensus       179 ~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~---~~~~v~~~t~  249 (363)
T 3m6i_A          179 LGDPVLICGA-GPIG-----LITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEE---SAKKIVESFG  249 (363)
T ss_dssp             TTCCEEEECC-SHHH-----HHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHH---HHHHHHHHTS
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHH---HHHHHHHHhC
Confidence            5889999998 9999     4444444444443 3322                    222223333   333344333 


Q ss_pred             CCCccEEEEcccC
Q 041276           74 NGKLNILINNVGT   86 (251)
Q Consensus        74 ~~~id~lv~~ag~   86 (251)
                      +.++|+++.++|.
T Consensus       250 g~g~Dvvid~~g~  262 (363)
T 3m6i_A          250 GIEPAVALECTGV  262 (363)
T ss_dssp             SCCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999884

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=93.90  E-value=0.7  Score=37.77  Aligned_cols=105  Identities=14%  Similarity=0.134  Sum_probs=58.3

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHH-HHHHHH--------------HHHHHhcCCCccEEEEc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRA-EREKLM--------------KQVSSLFNGKLNILINN   83 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~--------------~~i~~~~~~~id~lv~~   83 (251)
                      +|.|+||+|.+|     ..++..+...+.-...+-.|+.... ...++.              ....+.+ ...|++|++
T Consensus         2 KI~IiGa~G~VG-----~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~-~~aDvVvi~   75 (314)
T 1mld_A            2 KVAVLGASGGIG-----QPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL-KGCDVVVIP   75 (314)
T ss_dssp             EEEEETTTSTTH-----HHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH-TTCSEEEEC
T ss_pred             EEEEECCCChHH-----HHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHh-CCCCEEEEC
Confidence            689999999999     5566666655521223344444322 111111              1233345 689999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      +|....++    .+.   .+.+..|+.....+.+.+.++   ...+.++++|-...
T Consensus        76 ag~~~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           76 AGVPRKPG----MTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             CSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             CCcCCCCC----CcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            99754221    111   123566666555555554332   24578888765444

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=93.87  E-value=0.1  Score=43.60  Aligned_cols=57  Identities=19%  Similarity=0.198  Sum_probs=39.8

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc----------------CCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK----------------CFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      .++|+|.|| |++|     ..+++.|.+.                ...+..+.+|++|.+++.+++        .+.|+|
T Consensus        16 ~mkilvlGa-G~vG-----~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~--------~~~DvV   81 (365)
T 3abi_A           16 HMKVLILGA-GNIG-----RAIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVM--------KEFELV   81 (365)
T ss_dssp             CCEEEEECC-SHHH-----HHHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHH--------TTCSEE
T ss_pred             ccEEEEECC-CHHH-----HHHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHH--------hCCCEE
Confidence            356999998 9999     3444444322                112345678999999888887        578999


Q ss_pred             EEcccCC
Q 041276           81 INNVGTN   87 (251)
Q Consensus        81 v~~ag~~   87 (251)
                      |++++..
T Consensus        82 i~~~p~~   88 (365)
T 3abi_A           82 IGALPGF   88 (365)
T ss_dssp             EECCCGG
T ss_pred             EEecCCc
Confidence            9998753

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=93.31  E-value=0.092  Score=43.11  Aligned_cols=29  Identities=31%  Similarity=0.492  Sum_probs=21.2

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      +|||+||+|++|     ..+.+-++..|.++...
T Consensus       152 ~VlV~Ga~G~vG-----~~~~q~a~~~Ga~vi~~  180 (328)
T 1xa0_A          152 PVLVTGATGGVG-----SLAVSMLAKRGYTVEAS  180 (328)
T ss_dssp             CEEESSTTSHHH-----HHHHHHHHHTTCCEEEE
T ss_pred             eEEEecCCCHHH-----HHHHHHHHHCCCEEEEE
Confidence            799999999999     56666666566554443

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=93.26  E-value=0.087  Score=44.04  Aligned_cols=30  Identities=20%  Similarity=0.365  Sum_probs=21.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHh-cCCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKT-KCFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~-~~~~~~   50 (251)
                      .|++|||+||+|++|     ..+.+-.+. .+.++.
T Consensus       171 ~g~~VlV~Ga~G~vG-----~~a~qlak~~~g~~Vi  201 (363)
T 4dvj_A          171 AAPAILIVGGAGGVG-----SIAVQIARQRTDLTVI  201 (363)
T ss_dssp             SEEEEEEESTTSHHH-----HHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHhcCCEEE
Confidence            588999999999999     445554444 244443

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=93.24  E-value=0.16  Score=42.66  Aligned_cols=62  Identities=16%  Similarity=0.172  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEe-----------------ccCC--CHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSV-----------------CDAS--SRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~-----------------~D~~--~~~~~~~~~~~i~~~~~~   75 (251)
                      .|++|||+| +|++|     ..+.+-++..| .++....                 .|..  +.+   .+.+++.+..++
T Consensus       195 ~g~~VlV~G-aG~vG-----~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~---~~~~~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLG-----LFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVE---ERRKAIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHH-----HHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHH---HHHHHHHHHTTT
T ss_pred             CCCEEEEEC-cCHHH-----HHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcc---hHHHHHHHHhCC
Confidence            589999999 89999     55555555555 3444332                 1211  022   233344443322


Q ss_pred             -CccEEEEcccC
Q 041276           76 -KLNILINNVGT   86 (251)
Q Consensus        76 -~id~lv~~ag~   86 (251)
                       ++|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             69999999884

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=93.13  E-value=0.28  Score=40.77  Aligned_cols=33  Identities=21%  Similarity=0.225  Sum_probs=23.8

Q ss_pred             CC-CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe
Q 041276           16 QG-MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV   53 (251)
Q Consensus        16 ~~-k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~   53 (251)
                      .| ++|||+||+|++|     ..+.+-.+..|.++....
T Consensus       166 ~g~~~VlV~Ga~G~vG-----~~aiqlak~~Ga~vi~~~  199 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVG-----KYASQIGKLLNFNSISVI  199 (364)
T ss_dssp             TTTCEEEESCTTSHHH-----HHHHHHHHHHTCEEEEEE
T ss_pred             CCCcEEEECCCCcHHH-----HHHHHHHHHCCCEEEEEe
Confidence            57 9999999999999     555555555565554443

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=92.99  E-value=1.1  Score=37.10  Aligned_cols=104  Identities=13%  Similarity=0.111  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH----------------HHHHhcCCCccE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK----------------QVSSLFNGKLNI   79 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----------------~i~~~~~~~id~   79 (251)
                      .+++|.|+|++|.+|     ..++..+...+..-..+-.|+ +.+.++....                ...+.+ ...|+
T Consensus         7 ~~~KV~ViGaaG~VG-----~~~a~~l~~~g~~~evvLiDi-~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al-~dADv   79 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIG-----SNMAQTAAMMRLTPNLCLYDP-FAVGLEGVAEEIRHCGFEGLNLTFTSDIKEAL-TDAKY   79 (343)
T ss_dssp             CSSEEEEETTTSHHH-----HHHHHHHHHTTCCSCEEEECS-CHHHHHHHHHHHHHHCCTTCCCEEESCHHHHH-TTEEE
T ss_pred             CCCEEEEECCCChHH-----HHHHHHHHhcCCCCEEEEEeC-CchhHHHHHHhhhhCcCCCCceEEcCCHHHHh-CCCCE
Confidence            457899999999999     555555555442123455565 3332222111                112233 57899


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCce-EEEeccc
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGN-IILVSSV  137 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~-iv~vss~  137 (251)
                      +|.++|...  .+  .   +.-.+.+..|+.-...+.+.    +.+. ..+. ++++|..
T Consensus        80 VvitaG~p~--kp--G---~~R~dLl~~N~~I~~~i~~~----i~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           80 IVSSGGAPR--KE--G---MTREDLLKGNAEIAAQLGKD----IKSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             EEECCC--------------CHHHHHHHHHHHHHHHHHH----HHHHCTTCCEEEECSSS
T ss_pred             EEEccCCCC--CC--C---CCHHHHHHHHHHHHHHHHHH----HHHhccCcEEEEEecCc
Confidence            999999643  21  1   12344566666555444444    4443 3464 6666643

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=92.94  E-value=0.083  Score=43.72  Aligned_cols=31  Identities=19%  Similarity=0.192  Sum_probs=23.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~   52 (251)
                      .|++|||+|+ |++|     ..+.+.++..|. ++...
T Consensus       164 ~g~~VlV~Ga-G~vG-----~~~~q~a~~~Ga~~Vi~~  195 (343)
T 2dq4_A          164 SGKSVLITGA-GPIG-----LMAAMVVRASGAGPILVS  195 (343)
T ss_dssp             TTSCEEEECC-SHHH-----HHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCEEEEE
Confidence            7899999999 9999     666666666665 55443

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=92.33  E-value=0.13  Score=41.54  Aligned_cols=67  Identities=21%  Similarity=0.294  Sum_probs=46.6

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHh----------cCCCccEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSL----------FNGKLNILI   81 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~----------~~~~id~lv   81 (251)
                      .++++|+++|+|+ ||+|     ..++..+.+.|. ++..+.-   +++..+++.+++...          .....|+||
T Consensus       122 ~~l~~k~vlvlGa-Gg~g-----~aia~~L~~~G~~~v~v~~R---~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiII  192 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAA-----RGVLKPLLDQQPASITVTNR---TFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVII  192 (281)
T ss_dssp             CCCTTCEEEEECC-SHHH-----HHHHHHHHTTCCSEEEEEES---SHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEE
T ss_pred             CCccCCEEEEECc-hHHH-----HHHHHHHHhcCCCeEEEEEC---CHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEE
Confidence            4678999999998 6899     788888888774 6655543   455566666655421          113589999


Q ss_pred             EcccCCC
Q 041276           82 NNVGTNY   88 (251)
Q Consensus        82 ~~ag~~~   88 (251)
                      ++.+...
T Consensus       193 naTp~gm  199 (281)
T 3o8q_A          193 NSTSASL  199 (281)
T ss_dssp             ECSCCCC
T ss_pred             EcCcCCC
Confidence            9887653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=92.21  E-value=0.2  Score=40.91  Aligned_cols=36  Identities=25%  Similarity=0.258  Sum_probs=27.6

Q ss_pred             CCCCCE-EEEecCCC-----------------C-cCcHHHHHHHHHHHHhcCCeeEEEec
Q 041276           14 SLQGMT-ALVTGGTK-----------------G-LGNEAELNECLREWKTKCFKVTGSVC   54 (251)
Q Consensus        14 ~l~~k~-vlItGas~-----------------g-iG~~~~~~~~~~~~~~~~~~~~~~~~   54 (251)
                      +++||+ ||||+|..                 | .|     .++++.+...|..|.++..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG-----~aiAe~~~~~Ga~V~lv~g   87 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRG-----ATSAEAFLAAGYGVLFLYR   87 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHH-----HHHHHHHHHTTCEEEEEEE
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHH-----HHHHHHHHHCCCEEEEEec
Confidence            367888 99998876                 4 55     7888888888888877643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=92.20  E-value=0.54  Score=37.60  Aligned_cols=67  Identities=13%  Similarity=0.153  Sum_probs=45.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHH---------hcC-CCccEE
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSS---------LFN-GKLNIL   80 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~---------~~~-~~id~l   80 (251)
                      ..++++|+++|+|+ ||+|     ..++..+.+.|. ++..+.   .+.+..+++.+++..         ... ...|+|
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~-----~aia~~L~~~G~~~v~i~~---R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~Div  185 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAV-----RGALLPFLQAGPSELVIAN---RDMAKALALRNELDHSRLRISRYEALEGQSFDIV  185 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHH-----HHHHHHHHHTCCSEEEEEC---SCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEE
T ss_pred             CCCccCCEEEEECc-cHHH-----HHHHHHHHHcCCCEEEEEe---CCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEE
Confidence            34678999999998 6888     778888887774 555443   345566666655431         110 368999


Q ss_pred             EEcccCC
Q 041276           81 INNVGTN   87 (251)
Q Consensus        81 v~~ag~~   87 (251)
                      ||+.+..
T Consensus       186 InaTp~g  192 (272)
T 3pwz_A          186 VNATSAS  192 (272)
T ss_dssp             EECSSGG
T ss_pred             EECCCCC
Confidence            9987654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=92.12  E-value=0.75  Score=37.95  Aligned_cols=104  Identities=13%  Similarity=0.123  Sum_probs=58.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcC-----CeeEEEeccCCC-HHHHHHHHHHH-----------------HHhcC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKC-----FKVTGSVCDASS-RAEREKLMKQV-----------------SSLFN   74 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~-~~~~~~~~~~i-----------------~~~~~   74 (251)
                      ++|+||||+|.||     ..++-.+...+     ..+..+-+|+.. .+..+....++                 .+.+ 
T Consensus         4 ~kV~V~GaaG~VG-----~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~-   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIA-----YSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAF-   77 (333)
T ss_dssp             EEEEESSTTSHHH-----HTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHT-
T ss_pred             eEEEEECCCCHHH-----HHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHh-
Confidence            6799999999999     55555554332     234466777753 12222211111                 2334 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-Cc-eEEEecccc
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AG-NIILVSSVC  138 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g-~iv~vss~~  138 (251)
                      .+.|++|+.||....++    .   .-.+.++.|+.....+.+.    +++.. .+ +++++|-..
T Consensus        78 ~daDvVvitAg~prkpG----~---tR~dll~~N~~i~~~i~~~----i~~~~~~~~~vivvsNPv  132 (333)
T 5mdh_A           78 KDLDVAILVGSMPRRDG----M---ERKDLLKANVKIFKCQGAA----LDKYAKKSVKVIVVGNPA  132 (333)
T ss_dssp             TTCSEEEECCSCCCCTT----C---CTTTTHHHHHHHHHHHHHH----HHHHSCTTCEEEECSSSH
T ss_pred             CCCCEEEEeCCCCCCCC----C---CHHHHHHHHHHHHHHHHHH----HHHhCCCCeEEEEcCCch
Confidence            57899999998653111    1   1234466676665555544    45543 35 577777643

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=92.10  E-value=1.3  Score=36.39  Aligned_cols=107  Identities=9%  Similarity=0.042  Sum_probs=52.2

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH----------------HhcCCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS----------------SLFNGK   76 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~----------------~~~~~~   76 (251)
                      ++..+++|.|+|+ |.+|     ..++..+...+.--..+-.|+ +.+..+....++.                +.+ ..
T Consensus         5 ~~~~~~kV~ViGa-G~vG-----~~~a~~l~~~~~~~el~l~D~-~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~-~~   76 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVG-----SSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLEDALPFTSPKKIYSAEYSDA-KD   76 (326)
T ss_dssp             --CCCCEEEEECC-SHHH-----HHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG-TT
T ss_pred             ccCCCCEEEEECC-CHHH-----HHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHhhHhhhhhhcCCcEEEECcHHHh-cC
Confidence            4556788999996 9999     555555555443124455565 3443333332222                122 46


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccc
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVC  138 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~  138 (251)
                      .|++|.++|....++       +.-.+.++.|..-..    .+.+.+.+. +.+.++++|...
T Consensus        77 aDiVvi~ag~~~kpG-------~tR~dL~~~N~~I~~----~i~~~i~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           77 ADLVVITAGAPQKPG-------ETRLDLVNKNLKILK----SIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             CSEEEECCCCC-----------------------CHH----HHHHHHHTTTCCSEEEECSSSH
T ss_pred             CCEEEECCCCCCCCC-------chHHHHHHHHHHHHH----HHHHHHHhcCCceEEEEccCch
Confidence            899999999643111       122344555654444    344444544 457788777544

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=91.87  E-value=0.36  Score=39.72  Aligned_cols=30  Identities=20%  Similarity=0.362  Sum_probs=21.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|++|||+|+ |++|     ..+.+-++..|.++..
T Consensus       166 ~g~~VlV~Ga-G~vG-----~~a~qla~~~Ga~Vi~  195 (340)
T 3s2e_A          166 PGQWVVISGI-GGLG-----HVAVQYARAMGLRVAA  195 (340)
T ss_dssp             TTSEEEEECC-STTH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCCeEEE
Confidence            6899999997 8999     5555555555555443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=91.84  E-value=0.16  Score=41.33  Aligned_cols=63  Identities=16%  Similarity=0.082  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH-----HHHHhcCCCccEEEEcccC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK-----QVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~i~~~~~~~id~lv~~ag~   86 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|.++.... +-...+.++++=.     + .++.++++|+++.++|.
T Consensus       142 ~g~~VlV~Ga-G~vG-----~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d-~~~v~~g~Dvv~d~~g~  209 (315)
T 3goh_A          142 KQREVLIVGF-GAVN-----NLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYRE-PSQVTQKYFAIFDAVNS  209 (315)
T ss_dssp             SCCEEEEECC-SHHH-----HHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESS-GGGCCSCEEEEECC---
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcC-HHHhCCCccEEEECCCc
Confidence            6899999999 9999     666666666676655554 3333333333200     0 11112568888887774

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=91.71  E-value=5.6  Score=34.62  Aligned_cols=148  Identities=8%  Similarity=-0.023  Sum_probs=90.0

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      ...+.|.+.+|+....+-+     ..+...+...|..+..+...-.+.+.+...+.+..... +.++.|++..+......
T Consensus        38 ~~~~~g~wl~~~~~~~~~~-----~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~l~~l~~~~~  111 (496)
T 3mje_A           38 TARPAGRLLAVISPDHAGA-----PWVTAVLDALGPDTVRFEAKGTDRAAWAAQLAQLREDE-GEFHAVVSLLAAAEALH  111 (496)
T ss_dssp             SCCCSSCEEEEECTTSCCS-----HHHHHHHHHHCTTSEEEECCSSCHHHHHHHHHHHHHHH-CSCSEEEECGGGCCSEE
T ss_pred             CCCCCceEEEEeCCCcccc-----HHHHHHHHhcCCcEEEeCCCCCCHHHHHHHHHhhhccc-CCccEEEEccccccccC
Confidence            4556788888887765545     33445555566666555555567888888887666655 68999999887653111


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCC
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN  171 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  171 (251)
                      +....        ...-+.+.+.+.|++...   ....++..++..+-.... ....-...++++-+|.|+++.|+...-
T Consensus       112 ~~~~~--------~~~~~~~~l~l~qal~~~---~~~~~l~~vT~ga~~~~~-~~~~~~p~~a~l~Gl~r~~~~E~P~~~  179 (496)
T 3mje_A          112 TDHGS--------VPLGLAQTLLLAQALGDA---GLTAPLWCLTRGGVAAGR-GDVLSSPVQGALWGLGRVIGLEHPDRW  179 (496)
T ss_dssp             TTEEE--------EEHHHHHHHHHHHHHHHH---TCCSCEEEEEESSSCCST-TCCCCCHHHHHHHHHHHHHHHHSGGGE
T ss_pred             ccccc--------hhhHHHHHHHHHHHHHhc---CCCCcEEEEECCCEECCC-CCCCCChHHHHHHHHHHHHHHhCCCCe
Confidence            11100        112355667777776432   223567766654432221 112235678999999999999976544


Q ss_pred             eEEEEE
Q 041276          172 IRINSV  177 (251)
Q Consensus       172 i~v~~i  177 (251)
                      .+...+
T Consensus       180 ~~lvDl  185 (496)
T 3mje_A          180 GGLIDL  185 (496)
T ss_dssp             EEEEEE
T ss_pred             EEEEeC
Confidence            444444

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=91.62  E-value=0.078  Score=43.57  Aligned_cols=32  Identities=28%  Similarity=0.476  Sum_probs=23.8

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEecc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCD   55 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D   55 (251)
                      +|||+||+|++|     ..+.+.++..|.++.....+
T Consensus       153 ~VlV~Ga~G~vG-----~~~~q~a~~~Ga~vi~~~~~  184 (330)
T 1tt7_A          153 SVLVTGATGGVG-----GIAVSMLNKRGYDVVASTGN  184 (330)
T ss_dssp             CEEEESTTSHHH-----HHHHHHHHHHTCCEEEEESS
T ss_pred             eEEEECCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence            799999999999     66666666667665554433

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=91.48  E-value=0.51  Score=39.41  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=21.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~   52 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|. ++..+
T Consensus       192 ~g~~VlV~Ga-G~vG-----~~a~qla~~~Ga~~Vi~~  223 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVG-----LAAVMGCHSAGAKRIIAV  223 (374)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCEEEEE
Confidence            5799999995 8999     555666655554 44433

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=91.30  E-value=0.3  Score=40.94  Aligned_cols=65  Identities=15%  Similarity=0.216  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHH---------------HHHHHHHHHhcCCCccE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAER---------------EKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~---------------~~~~~~i~~~~~~~id~   79 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|. ++..+..+-...+..               ..+.+.+.+..++++|+
T Consensus       193 ~g~~VlV~Ga-G~vG-----~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~  266 (378)
T 3uko_A          193 PGSNVAIFGL-GTVG-----LAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDY  266 (378)
T ss_dssp             TTCCEEEECC-SHHH-----HHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCE
Confidence            5889999998 8999     555555555554 444432111111110               11233333333257899


Q ss_pred             EEEcccC
Q 041276           80 LINNVGT   86 (251)
Q Consensus        80 lv~~ag~   86 (251)
                      ++.++|.
T Consensus       267 vid~~g~  273 (378)
T 3uko_A          267 SFECIGN  273 (378)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9888884

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=91.27  E-value=1.2  Score=36.91  Aligned_cols=107  Identities=13%  Similarity=0.068  Sum_probs=57.7

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-----CCeeEEEeccCCCH-HHHHHHHHHH-----------------
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTK-----CFKVTGSVCDASSR-AEREKLMKQV-----------------   69 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~-~~~~~~~~~i-----------------   69 (251)
                      ..++.-+|.|+||+|+||     ..++-.+...     .......-.|+... ...+...-++                 
T Consensus        20 ~s~~~vKVaViGAaG~IG-----~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIG-----YALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADP   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHH-----HHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCH
T ss_pred             CCCCCCEEEEECcCcHHH-----HHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCCh
Confidence            345566899999999999     4444443322     12345566676532 2223222222                 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCceEEEecc
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS--GAGNIILVSS  136 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~g~iv~vss  136 (251)
                      .+.+ ..-|++|..||....+    ..+-   .+.++.|..=.    +.+.+.+.+.  +...|+.+|-
T Consensus        95 ~~a~-~~advVvi~aG~prkp----GmtR---~DLl~~Na~I~----~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           95 RVAF-DGVAIAIMCGAFPRKA----GMER---KDLLEMNARIF----KEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HHHT-TTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHH----HHHHHHHHHHSCTTCEEEECSS
T ss_pred             HHHh-CCCCEEEECCCCCCCC----CCCH---HHHHHHhHHHH----HHHHHHHHhhccCceEEEEeCC
Confidence            1234 6799999999975422    2333   44566665544    4444444543  3345666654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=91.21  E-value=0.28  Score=40.65  Aligned_cols=65  Identities=17%  Similarity=0.275  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC-CeeEEEeccCCCHHHH-----------HHHHHHHHHhcCCCccEEEEc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC-FKVTGSVCDASSRAER-----------EKLMKQVSSLFNGKLNILINN   83 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~-----------~~~~~~i~~~~~~~id~lv~~   83 (251)
                      .|++|||.|++|++|     ..+.+-.+..+ .++.....+ ...+.+           ..+.+++.+..++++|+++.+
T Consensus       142 ~g~~VlV~Ga~G~vG-----~~a~qla~~~g~~~V~~~~~~-~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~  215 (349)
T 4a27_A          142 EGMSVLVHSAGGGVG-----QAVAQLCSTVPNVTVFGTAST-FKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDC  215 (349)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHTTSTTCEEEEEECG-GGHHHHGGGSSEEEETTSCHHHHHHHHCTTCEEEEEEE
T ss_pred             CCCEEEEEcCCcHHH-----HHHHHHHHHcCCcEEEEeCCH-HHHHHHHcCCcEEEcCCccHHHHHHHhcCCCceEEEEC
Confidence            689999999999999     55555555443 333332210 011100           112233333333579999999


Q ss_pred             ccC
Q 041276           84 VGT   86 (251)
Q Consensus        84 ag~   86 (251)
                      +|.
T Consensus       216 ~g~  218 (349)
T 4a27_A          216 LCG  218 (349)
T ss_dssp             CC-
T ss_pred             CCc
Confidence            884

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=91.19  E-value=0.51  Score=39.05  Aligned_cols=26  Identities=19%  Similarity=-0.001  Sum_probs=18.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|.
T Consensus       166 ~g~~VlV~Ga-G~vG-----~~a~qla~~~Ga  191 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVG-----LMSVAGANHLGA  191 (352)
T ss_dssp             TTCCEEEECC-SHHH-----HHHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCC
Confidence            5889999985 8999     555555555554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=91.18  E-value=0.59  Score=39.01  Aligned_cols=31  Identities=29%  Similarity=0.360  Sum_probs=21.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~   52 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|. ++..+
T Consensus       191 ~g~~VlV~Ga-G~vG-----~~a~qla~~~Ga~~Vi~~  222 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVG-----LSVIMGCKAAGAARIIGV  222 (374)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEEEE
Confidence            5799999995 8999     566666665565 44443

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=91.17  E-value=0.55  Score=39.18  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=21.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~   52 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|. ++..+
T Consensus       190 ~g~~VlV~Ga-G~vG-----~~avqla~~~Ga~~Vi~~  221 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVG-----LAVIMGCKVAGASRIIGV  221 (373)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHHTCSEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEEEE
Confidence            5799999996 8999     555555555554 44433

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=91.11  E-value=0.58  Score=39.07  Aligned_cols=31  Identities=19%  Similarity=0.148  Sum_probs=21.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~   52 (251)
                      .|++|||+|+ |++|     ..+++-.+..|. ++..+
T Consensus       195 ~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga~~Vi~~  226 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVG-----LSAIIGCKIAGASRIIAI  226 (376)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEEEE
Confidence            5799999996 8999     556666665554 44443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=91.10  E-value=0.56  Score=39.13  Aligned_cols=31  Identities=26%  Similarity=0.331  Sum_probs=20.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~   52 (251)
                      .|++|||+|+ |++|     ..+++-.+..|. ++...
T Consensus       191 ~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga~~Vi~~  222 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVG-----FSAIVGCKAAGASRIIGV  222 (373)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHHTCSEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEEEE
Confidence            5799999995 8999     555555555554 44433

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=90.85  E-value=0.39  Score=39.94  Aligned_cols=29  Identities=24%  Similarity=0.269  Sum_probs=20.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CCeeE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTK-CFKVT   50 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~~~~   50 (251)
                      .|++|||+|+ |++|     ..+.+-.+.. |.++.
T Consensus       186 ~g~~VlV~Ga-G~vG-----~~avqlak~~~Ga~Vi  215 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLG-----HIAVQLLKVMTPATVI  215 (359)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHHCCCEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCeEE
Confidence            5899999999 8999     5555555555 55443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=90.80  E-value=0.19  Score=41.11  Aligned_cols=32  Identities=28%  Similarity=0.388  Sum_probs=25.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|++|||+||+|++|     ..+.+-++..|.++...
T Consensus       152 ~g~~vlV~Ga~G~vG-----~~a~q~a~~~Ga~vi~~  183 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVG-----HLAIQLAKQKGTTVITT  183 (321)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEEcCCcHHH-----HHHHHHHHHcCCEEEEE
Confidence            689999999999999     67777777777665443

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=90.72  E-value=0.3  Score=40.87  Aligned_cols=30  Identities=20%  Similarity=0.138  Sum_probs=21.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~   51 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|. ++..
T Consensus       182 ~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga~~Vi~  212 (370)
T 4ej6_A          182 AGSTVAILGG-GVIG-----LLTVQLARLAGATTVIL  212 (370)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCCEEEE
Confidence            5899999998 8999     556666665565 4433

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=90.71  E-value=0.44  Score=40.30  Aligned_cols=31  Identities=23%  Similarity=0.221  Sum_probs=21.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTG   51 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~   51 (251)
                      -.|++|||+|+ |++|     ..+.+-.+..|. ++..
T Consensus       212 ~~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga~~Vi~  243 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIG-----LAAVAILKHAGASKVIL  243 (404)
T ss_dssp             CTTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHH-----HHHHHHHHHcCCCEEEE
Confidence            36899999998 8999     555555555554 4433

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=90.33  E-value=4.3  Score=33.26  Aligned_cols=105  Identities=8%  Similarity=0.037  Sum_probs=55.4

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH----------------hcCCCccEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS----------------LFNGKLNIL   80 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~----------------~~~~~id~l   80 (251)
                      .++|.|+|+ |.+|     ..++-.+...+.--..+-.|+ +.+..+....++..                .+ ..-|++
T Consensus         9 ~~KI~IiGa-G~vG-----~~la~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~-~~aDvV   80 (326)
T 2zqz_A            9 HQKVILVGD-GAVG-----SSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLSNALPFTSPKKIYSAEYSDA-KDADLV   80 (326)
T ss_dssp             CCEEEEECC-SHHH-----HHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG-GGCSEE
T ss_pred             CCEEEEECC-CHHH-----HHHHHHHHcCCCCCEEEEEeC-CchHhHHHHHHHHHHHHhcCCeEEEECCHHHh-CCCCEE
Confidence            468999999 9999     444444443332224455666 44444443333322                22 468999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      |..+|....+    ..+   -.+.+..|+.-...+.+.+..+   .+.+.++++|-...
T Consensus        81 ii~ag~~~k~----g~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           81 VITAGAPQKP----GET---RLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD  129 (326)
T ss_dssp             EECCCCC---------C---HHHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHH
T ss_pred             EEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHH
Confidence            9999864311    122   2234555555444444443222   34578888766444

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=90.21  E-value=5.7  Score=32.34  Aligned_cols=107  Identities=10%  Similarity=0.060  Sum_probs=60.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHH----HHHHH--------------HHhc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS-RAEREK----LMKQV--------------SSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~----~~~~i--------------~~~~   73 (251)
                      +.++.++|.|+|+ |.+|     ..++..+...+. -..+-.|... .+..+.    +.+..              .+.+
T Consensus         4 m~~~~~kv~ViGa-G~vG-----~~ia~~l~~~g~-~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~   76 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTG-----ATTAFLLAQKEL-ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADT   76 (315)
T ss_dssp             CCCCCCEEEEECC-SHHH-----HHHHHHHHHTTC-CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG
T ss_pred             cccCCCEEEEECC-CHHH-----HHHHHHHHhCCC-CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHh
Confidence            3456688999997 8999     666666666655 2445556652 222211    11111              1223


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccc
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSV  137 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~  137 (251)
                       ...|++|.++|....+    ..+   -.+.+..|..-...+.+.+..+   .+.+.++++|-.
T Consensus        77 -~~aDvVIiaag~p~kp----g~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           77 -ADSDVVVITAGIARKP----GMS---RDDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             -TTCSEEEECCSCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             -CCCCEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence             5689999999975322    122   2445666665555555444332   345778887754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=89.80  E-value=0.58  Score=38.84  Aligned_cols=65  Identities=11%  Similarity=0.083  Sum_probs=39.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH----------HHHHhcCCCccEEEEccc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMK----------QVSSLFNGKLNILINNVG   85 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----------~i~~~~~~~id~lv~~ag   85 (251)
                      .|++|||+|+ |++|     ..+.+-++..|.++.....+-...+.++++=.          ...+...+++|++|.++|
T Consensus       179 ~g~~VlV~Ga-G~vG-----~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g  252 (360)
T 1piw_A          179 PGKKVGIVGL-GGIG-----SMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCAS  252 (360)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCC
Confidence            5899999999 9999     66666666666665544433333333332100          111111136899999998


Q ss_pred             C
Q 041276           86 T   86 (251)
Q Consensus        86 ~   86 (251)
                      .
T Consensus       253 ~  253 (360)
T 1piw_A          253 S  253 (360)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=89.61  E-value=0.33  Score=41.24  Aligned_cols=64  Identities=14%  Similarity=0.276  Sum_probs=40.6

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHH----------HHHHhcCCCccEEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMK----------QVSSLFNGKLNILIN   82 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~----------~i~~~~~~~id~lv~   82 (251)
                      ++.|++|+|.|+ |+||     ..+++.+...|. ++..+  |-+ ++..+++.+          .+.+.. ...|+||+
T Consensus       164 ~l~g~~VlIiGa-G~iG-----~~~a~~l~~~G~~~V~v~--~r~-~~ra~~la~~~g~~~~~~~~l~~~l-~~aDvVi~  233 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMG-----KTVAKSLVDRGVRAVLVA--NRT-YERAVELARDLGGEAVRFDELVDHL-ARSDVVVS  233 (404)
T ss_dssp             CCTTCEEEEESC-CHHH-----HHHHHHHHHHCCSEEEEE--CSS-HHHHHHHHHHHTCEECCGGGHHHHH-HTCSEEEE
T ss_pred             cccCCEEEEECh-HHHH-----HHHHHHHHHCCCCEEEEE--eCC-HHHHHHHHHHcCCceecHHhHHHHh-cCCCEEEE
Confidence            478999999998 9999     777888877765 55443  332 222222211          222223 46899999


Q ss_pred             cccCC
Q 041276           83 NVGTN   87 (251)
Q Consensus        83 ~ag~~   87 (251)
                      +.+..
T Consensus       234 at~~~  238 (404)
T 1gpj_A          234 ATAAP  238 (404)
T ss_dssp             CCSSS
T ss_pred             ccCCC
Confidence            98743

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=89.55  E-value=0.54  Score=38.86  Aligned_cols=27  Identities=26%  Similarity=0.161  Sum_probs=19.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFK   48 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~   48 (251)
                      .|++|||+|+ |++|     ..+.+-++..|.+
T Consensus       168 ~g~~VlV~Ga-G~vG-----~~a~qla~~~Ga~  194 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIG-----LVSVLAAKAYGAF  194 (352)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCCE
Confidence            5899999997 8999     4555555545544

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=89.50  E-value=0.099  Score=42.08  Aligned_cols=68  Identities=15%  Similarity=0.126  Sum_probs=41.3

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHH-----HHHHHHHHhcCCCccEEEEcccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAERE-----KLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~-----~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .++++|+++|+|+ ||+|     ..++..+...|. ++..+.-+....+.+.     ..++++.+.. ...|+||++.+.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g-----~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~-~~aDiVInaTp~  185 (277)
T 3don_A          113 EGIEDAYILILGA-GGAS-----KGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHL-DEFDIIINTTPA  185 (277)
T ss_dssp             TTGGGCCEEEECC-SHHH-----HHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTG-GGCSEEEECCC-
T ss_pred             CCcCCCEEEEECC-cHHH-----HHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHh-cCCCEEEECccC
Confidence            4578999999997 7899     888888888876 5655533321111100     0122233323 579999999865


Q ss_pred             C
Q 041276           87 N   87 (251)
Q Consensus        87 ~   87 (251)
                      .
T Consensus       186 G  186 (277)
T 3don_A          186 G  186 (277)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=89.50  E-value=7  Score=31.99  Aligned_cols=105  Identities=13%  Similarity=0.052  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH-----------------HhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS-----------------SLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~-----------------~~~~~~id   78 (251)
                      ..++|.|+|+ |.+|     ..++..+...+.--..+-.|+ +.+.++....++.                 +.+ ..-|
T Consensus         4 ~~~kI~ViGa-G~vG-----~~~a~~l~~~~~~~~l~l~D~-~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~-~~aD   75 (326)
T 3pqe_A            4 HVNKVALIGA-GFVG-----SSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDC-KDAD   75 (326)
T ss_dssp             SCCEEEEECC-SHHH-----HHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGG-TTCS
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHhCCCCceEEEEec-chHHHHHHHHHHHhccccccCCeEEEeCcHHHh-CCCC
Confidence            3568999996 9999     566666655543113455565 3443433222222                 123 4689


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCG  139 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~  139 (251)
                      ++|.++|...  .+  ..+   -.+.+..|..-...+.+.+    .+. +.+.++++|....
T Consensus        76 vVvi~ag~p~--kp--G~~---R~dL~~~N~~Iv~~i~~~I----~~~~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           76 IVCICAGANQ--KP--GET---RLELVEKNLKIFKGIVSEV----MASGFDGIFLVATNPVD  126 (326)
T ss_dssp             EEEECCSCCC--CT--TCC---HHHHHHHHHHHHHHHHHHH----HHTTCCSEEEECSSSHH
T ss_pred             EEEEecccCC--CC--Ccc---HHHHHHHHHHHHHHHHHHH----HHhcCCeEEEEcCChHH
Confidence            9999999643  21  122   2345666665554444444    433 4577888776543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=89.30  E-value=0.74  Score=38.14  Aligned_cols=26  Identities=27%  Similarity=0.187  Sum_probs=18.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|.
T Consensus       171 ~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga  196 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIG-----MVTLLVAKAMGA  196 (356)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTC
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCC
Confidence            5899999996 8999     444554444444

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=88.68  E-value=0.46  Score=39.86  Aligned_cols=31  Identities=23%  Similarity=0.260  Sum_probs=21.3

Q ss_pred             CCCEEEEec-CCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTG-GTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItG-as~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|.+|||.| |+|++|     ..+.+-.+..|.++..
T Consensus       170 ~g~~vlV~gag~G~vG-----~~a~q~a~~~Ga~Vi~  201 (379)
T 3iup_A          170 EGHSALVHTAAASNLG-----QMLNQICLKDGIKLVN  201 (379)
T ss_dssp             TTCSCEEESSTTSHHH-----HHHHHHHHHHTCCEEE
T ss_pred             CCCEEEEECCCCCHHH-----HHHHHHHHHCCCEEEE
Confidence            578899997 999999     5555555555555443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=88.63  E-value=7.8  Score=33.56  Aligned_cols=141  Identities=13%  Similarity=0.106  Sum_probs=79.9

Q ss_pred             CCCCEEEEecCC--CCcCcHHHHHHHHHHHHhcCCeeEEEecc-CCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           15 LQGMTALVTGGT--KGLGNEAELNECLREWKTKCFKVTGSVCD-ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        15 l~~k~vlItGas--~giG~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      ..+.+.++....  ++++     ..+.+.+...+..+..+..+ -.+.+.+...+..    . +.++.+++..+......
T Consensus        31 ~~~~wlv~~~~~~~~~~~-----~~l~~~l~~~g~~~~~v~~~~~~~~~~~~~~l~~----~-~~~~~vv~l~~~~~~~~  100 (486)
T 2fr1_A           31 LDGTWLVAKYAGTADETS-----TAAREALESAGARVRELVVDARCGRDELAERLRS----V-GEVAGVLSLLAVDEAEP  100 (486)
T ss_dssp             CCSEEEEEECTTSSHHHH-----HHHHHHHHTTSCEEEEEECCTTCCHHHHHHHHTT----S-CCCSEEEECTTTTCCCC
T ss_pred             CCCCEEEEECCcccccHH-----HHHHHHHHhCCCeEEEEeCCCCcCHHHHHHHHhh----c-CCCceEEEecccCCCcc
Confidence            445566565444  5666     77888888888777766653 3355554444422    2 46888888876543221


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCC
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN  171 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  171 (251)
                      +...        .....+.+.+.++|++..   .....++..++..+-.... ........++++-+|.|+++.|+....
T Consensus       101 ~~~~--------~~~~~~~~~l~l~qal~~---~~~~~~l~~vt~ga~~~~~-~~~~~~~~~a~l~Gl~r~~~~E~p~~~  168 (486)
T 2fr1_A          101 EEAP--------LALASLADTLSLVQAMVS---AELGCPLWTVTESAVATGP-FERVRNAAHGALWGVGRVIALENPAVW  168 (486)
T ss_dssp             SSCG--------GGCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCSST-TSCCSCGGGHHHHHHHHHHHHHCGGGE
T ss_pred             ccch--------hhhhhHHHHHHHHHHHHh---CCCCCcEEEEecCCEECCC-CCCcCCHHHhHHHHhhhhHHhhCCCce
Confidence            1110        011334566677777642   2233567666654322211 112235668999999999999976543


Q ss_pred             eEEEEE
Q 041276          172 IRINSV  177 (251)
Q Consensus       172 i~v~~i  177 (251)
                      .+...+
T Consensus       169 ~~~vdl  174 (486)
T 2fr1_A          169 GGLVDV  174 (486)
T ss_dssp             EEEEEE
T ss_pred             EEEEEC
Confidence            344444

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=88.59  E-value=0.64  Score=38.31  Aligned_cols=30  Identities=20%  Similarity=0.243  Sum_probs=22.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhc--CCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTK--CFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~--~~~~~~   51 (251)
                      .|++|||+|+ |++|     ..+.+-.+..  |.++..
T Consensus       170 ~g~~VlV~Ga-G~vG-----~~aiqlak~~~~Ga~Vi~  201 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLA-----VYTIQILKALMKNITIVG  201 (344)
T ss_dssp             SSCEEEEECC-SHHH-----HHHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHhcCCCEEEE
Confidence            7899999999 8999     6666666666  655443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=88.38  E-value=0.76  Score=38.29  Aligned_cols=26  Identities=15%  Similarity=0.045  Sum_probs=18.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|.
T Consensus       190 ~g~~VlV~Ga-G~vG-----~~a~qlak~~Ga  215 (371)
T 1f8f_A          190 PASSFVTWGA-GAVG-----LSALLAAKVCGA  215 (371)
T ss_dssp             TTCEEEEESC-SHHH-----HHHHHHHHHHTC
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHcCC
Confidence            5789999995 8999     555555554454

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=88.14  E-value=2  Score=34.53  Aligned_cols=58  Identities=14%  Similarity=0.157  Sum_probs=41.7

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .+++||.++|.|+|+-+|     ..++..+...+..+....-...+   +.+.       . .+-|+||..+|.
T Consensus       156 i~l~Gk~vvVvGrs~iVG-----~p~A~lL~~~gAtVtv~h~~t~~---L~~~-------~-~~ADIVI~Avg~  213 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVG-----RPMATMLLNAGATVSVCHIKTKD---LSLY-------T-RQADLIIVAAGC  213 (285)
T ss_dssp             CCCTTCEEEEECCCTTTH-----HHHHHHHHHTTCEEEEECTTCSC---HHHH-------H-TTCSEEEECSSC
T ss_pred             CCCCCCEEEEECCCchHH-----HHHHHHHHHCCCeEEEEeCCchh---HHHH-------h-hcCCEEEECCCC
Confidence            468999999999999999     77777787777665544322211   2222       2 579999999985

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=87.97  E-value=0.54  Score=38.74  Aligned_cols=25  Identities=32%  Similarity=0.392  Sum_probs=17.6

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTK   45 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~   45 (251)
                      -.|++|||.|+ |++|     ..+.+-.+..
T Consensus       170 ~~g~~vlv~Ga-G~vG-----~~a~qla~~~  194 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLG-----HVGIQILRAV  194 (345)
T ss_dssp             CTTCEEEEECC-SHHH-----HHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHH-----HHHHHHHHHc
Confidence            35899999998 8999     4444444444

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=87.90  E-value=0.45  Score=36.09  Aligned_cols=30  Identities=20%  Similarity=0.201  Sum_probs=24.1

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV   53 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~   53 (251)
                      +++|+||+|.+|     ..+++.+...+.++..+.
T Consensus         2 ~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~   31 (212)
T 1jay_A            2 RVALLGGTGNLG-----KGLALRLATLGHEIVVGS   31 (212)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHTTTCEEEEEE
T ss_pred             eEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEe
Confidence            588999999999     888888888777665543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=87.85  E-value=1.2  Score=36.92  Aligned_cols=31  Identities=10%  Similarity=0.245  Sum_probs=23.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|++|||+||+|++|     ..+.+-.+..|.++..
T Consensus       167 ~g~~VlV~Ga~G~vG-----~~aiqlak~~Ga~vi~  197 (357)
T 1zsy_A          167 PGDSVIQNASNSGVG-----QAVIQIAAALGLRTIN  197 (357)
T ss_dssp             TTCEEEESSTTSHHH-----HHHHHHHHHHTCEEEE
T ss_pred             CCCEEEEeCCcCHHH-----HHHHHHHHHcCCEEEE
Confidence            589999999999999     6666666666655433

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=87.83  E-value=0.87  Score=38.33  Aligned_cols=63  Identities=21%  Similarity=0.236  Sum_probs=34.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEe----------------ccCCCHHHHHHHHHHHHHhcC-CCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSV----------------CDASSRAEREKLMKQVSSLFN-GKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~----------------~D~~~~~~~~~~~~~i~~~~~-~~i   77 (251)
                      .|++|||.|+ |++|     ..+.+-.+..|. ++..+.                .|.++.+.   +.+++.+..+ .++
T Consensus       185 ~g~~VlV~Ga-G~vG-----~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~---~~~~v~~~t~g~g~  255 (398)
T 1kol_A          185 PGSTVYVAGA-GPVG-----LAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTP---LHEQIAALLGEPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSC---HHHHHHHHHSSSCE
T ss_pred             CCCEEEEECC-cHHH-----HHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcch---HHHHHHHHhCCCCC
Confidence            5899999995 9999     444444444443 232221                12221111   2333333221 369


Q ss_pred             cEEEEcccCC
Q 041276           78 NILINNVGTN   87 (251)
Q Consensus        78 d~lv~~ag~~   87 (251)
                      |++|.++|..
T Consensus       256 Dvvid~~G~~  265 (398)
T 1kol_A          256 DCAVDAVGFE  265 (398)
T ss_dssp             EEEEECCCTT
T ss_pred             CEEEECCCCc
Confidence            9999999853

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=87.74  E-value=5.5  Score=32.42  Aligned_cols=103  Identities=8%  Similarity=0.056  Sum_probs=53.8

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH----------------hcCCCccEEE
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS----------------LFNGKLNILI   81 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~----------------~~~~~id~lv   81 (251)
                      .+|.|+|+ |.+|     ..++-.+...+.--..+-.|+ +.+..+....++..                .+ ..-|++|
T Consensus         6 ~KI~IiGa-G~vG-----~~~a~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~-~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVG-----SSYAFAMAQQGIAEEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYSGEYSDC-KDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHH-----HHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEECCGGGG-TTCSEEE
T ss_pred             CEEEEECC-CHHH-----HHHHHHHHcCCCCCEEEEEeC-CchHHHHHHHHHHHHHHhcCCeEEEECCHHHh-CCCCEEE
Confidence            57999998 9999     444444444332224455666 44444444443332                23 4689999


Q ss_pred             EcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccc
Q 041276           82 NNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCG  139 (251)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~  139 (251)
                      ..+|....++    .   .-.+.+..|..    +.+.+.+.+.+. +.+.++++|-...
T Consensus        78 i~ag~~~~~g----~---~R~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           78 ITAGAPQKPG----E---SRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPVD  125 (318)
T ss_dssp             ECCCC-----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             ECCCCCCCCC----C---CHHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcHH
Confidence            9998643111    1   11223444444    444444444544 4578888765443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=87.72  E-value=0.56  Score=39.56  Aligned_cols=14  Identities=21%  Similarity=0.508  Sum_probs=12.6

Q ss_pred             CCCEEEEecCCCCcC
Q 041276           16 QGMTALVTGGTKGLG   30 (251)
Q Consensus        16 ~~k~vlItGas~giG   30 (251)
                      .|++|||.|+ |++|
T Consensus       185 ~g~~VlV~Ga-G~vG  198 (398)
T 2dph_A          185 PGSHVYIAGA-GPVG  198 (398)
T ss_dssp             TTCEEEEECC-SHHH
T ss_pred             CCCEEEEECC-CHHH
Confidence            5899999996 9999

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=87.70  E-value=0.81  Score=37.90  Aligned_cols=32  Identities=19%  Similarity=0.084  Sum_probs=22.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHH-HHHH-HhcCCe-eEEEe
Q 041276           16 QGMTALVTGGTKGLGNEAELNEC-LREW-KTKCFK-VTGSV   53 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~-~~~~-~~~~~~-~~~~~   53 (251)
                      .+++|||+|+ |++|     ..+ .+-. +..|.+ +..+.
T Consensus       172 ~~~~VlV~Ga-G~vG-----~~a~iqla~k~~Ga~~Vi~~~  206 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLG-----LLTLAMLKVDDKGYENLYCLG  206 (357)
T ss_dssp             CCCEEEEECC-SHHH-----HHHHHHHHHCTTCCCEEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHHHcCCcEEEEEe
Confidence            4499999999 9999     666 6666 666654 54443

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=87.70  E-value=0.5  Score=38.04  Aligned_cols=63  Identities=14%  Similarity=0.216  Sum_probs=42.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHH--------HHHhcCCCccEEEEc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQ--------VSSLFNGKLNILINN   83 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~--------i~~~~~~~id~lv~~   83 (251)
                      .++++|+++|.|+ ||.|     ..++..+...+. ++.++.   .+.+..+++.+.        +.+ .  ..|+|||+
T Consensus       118 ~~~~~k~vlvlGa-GGaa-----raia~~L~~~G~~~v~v~n---Rt~~ka~~La~~~~~~~~~~l~~-l--~~DivIna  185 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAA-----RAVLQYLKDNFAKDIYVVT---RNPEKTSEIYGEFKVISYDELSN-L--KGDVIINC  185 (282)
T ss_dssp             CCCTTSEEEEECS-STTH-----HHHHHHHHHTTCSEEEEEE---SCHHHHHHHCTTSEEEEHHHHTT-C--CCSEEEEC
T ss_pred             CCccCCEEEEECC-cHHH-----HHHHHHHHHcCCCEEEEEe---CCHHHHHHHHHhcCcccHHHHHh-c--cCCEEEEC
Confidence            4578999999997 6888     778888887775 555544   334444444322        211 1  68999999


Q ss_pred             ccCC
Q 041276           84 VGTN   87 (251)
Q Consensus        84 ag~~   87 (251)
                      ....
T Consensus       186 Tp~G  189 (282)
T 3fbt_A          186 TPKG  189 (282)
T ss_dssp             SSTT
T ss_pred             CccC
Confidence            8654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=87.58  E-value=0.69  Score=37.41  Aligned_cols=67  Identities=15%  Similarity=0.214  Sum_probs=42.8

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH------HHHHHHhcCCCccEEEEcccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL------MKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~------~~~i~~~~~~~id~lv~~ag~   86 (251)
                      ..+.+|+++|.|+ |+||     ..+++.+...|.++..+.-+....+...+.      ...+.+.. ...|+|+++...
T Consensus       153 ~~l~g~~v~IiG~-G~iG-----~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l-~~aDvVi~~~p~  225 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTG-----MTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHV-KDIDICINTIPS  225 (300)
T ss_dssp             SCSTTSEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHS-TTCSEEEECCSS
T ss_pred             CCCCCCEEEEEcc-cHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHh-hCCCEEEECCCh
Confidence            4689999999996 8899     888888888876665543322111111110      12233344 578999998874

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=87.56  E-value=4.6  Score=32.08  Aligned_cols=64  Identities=14%  Similarity=0.107  Sum_probs=43.0

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH-H--HHhcCCCccEEEEcccCCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQ-V--SSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-i--~~~~~~~id~lv~~ag~~~   88 (251)
                      +|+++|.|+ ||.|     ..++..+...|.++..+.-+....+++. -+.- .  .+.. ...|+|||+.....
T Consensus       118 ~k~vlvlGa-GGaa-----raia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~~~~~l-~~~DiVInaTp~Gm  184 (269)
T 3phh_A          118 YQNALILGA-GGSA-----KALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCFMEPPK-SAFDLIINATSASL  184 (269)
T ss_dssp             CCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEESSCCS-SCCSEEEECCTTCC
T ss_pred             CCEEEEECC-CHHH-----HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEecHHHh-ccCCEEEEcccCCC
Confidence            899999997 8899     8888888888877777666655554443 1110 0  0111 26899999987654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=86.94  E-value=0.92  Score=37.58  Aligned_cols=65  Identities=23%  Similarity=0.268  Sum_probs=35.2

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHH-HH----------HHHHHHhcCCCccEEEEcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE-KL----------MKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~----------~~~i~~~~~~~id~lv~~a   84 (251)
                      .|++|||+|+ |++|     ..+.+-.+..|.++..+..+-...+... ++          .+.+.+.. +++|+++.++
T Consensus       180 ~g~~VlV~Ga-G~vG-----~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~-~g~D~vid~~  252 (357)
T 2cf5_A          180 PGLRGGILGL-GGVG-----HMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELA-DSLDYVIDTV  252 (357)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHST-TTEEEEEECC
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhc-CCCCEEEECC
Confidence            6899999995 9999     5555555555554433321111111111 00          01223323 5799999999


Q ss_pred             cCC
Q 041276           85 GTN   87 (251)
Q Consensus        85 g~~   87 (251)
                      |..
T Consensus       253 g~~  255 (357)
T 2cf5_A          253 PVH  255 (357)
T ss_dssp             CSC
T ss_pred             CCh
Confidence            853

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=86.61  E-value=2.1  Score=35.97  Aligned_cols=33  Identities=30%  Similarity=0.231  Sum_probs=24.7

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .+.+++|+|.|+ |.+|     ..+++.+...|.++..+
T Consensus       181 ~v~~~kV~ViG~-G~iG-----~~aa~~a~~lGa~V~v~  213 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAG-----LQALATAKRLGAKTTGY  213 (381)
T ss_dssp             EECCCEEEEESC-SHHH-----HHHHHHHHHHTCEEEEE
T ss_pred             CcCCCEEEEECc-hHHH-----HHHHHHHHHCCCEEEEE
Confidence            357899999999 6899     67777777777665544

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=86.55  E-value=1.7  Score=30.04  Aligned_cols=30  Identities=17%  Similarity=0.220  Sum_probs=20.8

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      ++.++|+|+ |.+|     ..+++.+...+.++..+
T Consensus         4 ~m~i~IiG~-G~iG-----~~~a~~L~~~g~~v~~~   33 (140)
T 1lss_A            4 GMYIIIAGI-GRVG-----YTLAKSLSEKGHDIVLI   33 (140)
T ss_dssp             -CEEEEECC-SHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECC-CHHH-----HHHHHHHHhCCCeEEEE
Confidence            367899987 8999     66777776666555444

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=86.38  E-value=12  Score=30.57  Aligned_cols=108  Identities=13%  Similarity=0.081  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH-----------------hcCCC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS-----------------LFNGK   76 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-----------------~~~~~   76 (251)
                      ....++|.|+|+ |.+|     ..++..+...+.--..+-.|+. .+..+....++..                 .+ ..
T Consensus        16 ~~~~~kV~ViGa-G~vG-----~~~a~~l~~~~~~~el~L~Di~-~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~-~~   87 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVG-----MACAISILMKDLADELALVDVI-EDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVT-AN   87 (331)
T ss_dssp             -CCSSEEEEECC-SHHH-----HHHHHHHHHTTCCSEEEEECSC-HHHHHHHHHHHHHTGGGCSCCEEEECSSGGGG-TT
T ss_pred             cCCCCEEEEECC-CHHH-----HHHHHHHHhCCCCceEEEEeCC-hHHHHHHHHhhhhhhhccCCCeEEEcCCHHHh-CC
Confidence            345688999997 8899     5555555444432245556663 3333333322221                 12 46


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccc
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCG  139 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~  139 (251)
                      -|++|.++|....++    .+   -.+.++.|..-...+.+.+..+   .+.+.++++|....
T Consensus        88 aDiVvi~aG~~~kpG----~t---R~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           88 SKLVIITAGARQQEG----ES---RLNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD  140 (331)
T ss_dssp             EEEEEECCSCCCCTT----CC---GGGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             CCEEEEccCCCCCCC----cc---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence            789999999753221    11   2235666665554455444332   34578888876543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=86.37  E-value=1.4  Score=36.79  Aligned_cols=31  Identities=23%  Similarity=0.173  Sum_probs=22.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|.+|||+|+ |++|     ..+.+-.+..|.++...
T Consensus       194 ~g~~VlV~Ga-G~vG-----~~aiqlak~~Ga~Vi~~  224 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLG-----HMGIKLAHAMGAHVVAF  224 (369)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHHCCCEEEEE
Confidence            5899999998 7899     56666666666554433

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=86.17  E-value=0.47  Score=44.01  Aligned_cols=62  Identities=13%  Similarity=0.222  Sum_probs=39.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe---------------ccCCCHHHHHHHHHHHHHhcC-CCccE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV---------------CDASSRAEREKLMKQVSSLFN-GKLNI   79 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~---------------~D~~~~~~~~~~~~~i~~~~~-~~id~   79 (251)
                      .|++|||.||+||+|     ..+.+-.+..|.++....               .|..+.    .+.+.+.+..+ .++|+
T Consensus       345 ~G~~VLI~gaaGgvG-----~~aiqlAk~~Ga~V~~t~~~~k~~~l~lga~~v~~~~~~----~~~~~i~~~t~g~GvDv  415 (795)
T 3slk_A          345 PGESLLVHSAAGGVG-----MAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTC----DFEQQFLGATGGRGVDV  415 (795)
T ss_dssp             TTCCEEEESTTBHHH-----HHHHHHHHHTTCCEEEECCGGGGGGSCSCGGGEECSSSS----THHHHHHHHSCSSCCSE
T ss_pred             CCCEEEEecCCCHHH-----HHHHHHHHHcCCEEEEEeChHHhhhhhcChhheeecCCh----hHHHHHHHHcCCCCeEE
Confidence            689999999999999     666666666666654431               111121    23344444332 36999


Q ss_pred             EEEcccC
Q 041276           80 LINNVGT   86 (251)
Q Consensus        80 lv~~ag~   86 (251)
                      ++++.|.
T Consensus       416 Vld~~gg  422 (795)
T 3slk_A          416 VLNSLAG  422 (795)
T ss_dssp             EEECCCT
T ss_pred             EEECCCc
Confidence            9998874

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=85.88  E-value=0.98  Score=36.39  Aligned_cols=66  Identities=15%  Similarity=0.258  Sum_probs=41.3

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH------HHHHHHhcCCCccEEEEccc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL------MKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~------~~~i~~~~~~~id~lv~~ag   85 (251)
                      ..+.||+|+|.|+ |+||     ..+++.+...|.++..+.-+....+...+.      .+.+.+.. ...|+|+++..
T Consensus       151 ~~l~g~~v~IiG~-G~iG-----~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l-~~aDvVi~~~p  222 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVG-----MSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQEL-RDVDVCINTIP  222 (293)
T ss_dssp             SCSTTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHT-TTCSEEEECCS
T ss_pred             CCCCCCEEEEEee-CHHH-----HHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHh-cCCCEEEECCC
Confidence            4688999999995 8899     888888888876655443222111111110      01233334 57899998875

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=85.69  E-value=1.9  Score=36.23  Aligned_cols=33  Identities=18%  Similarity=0.079  Sum_probs=25.4

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .+.+++|+|+|+ |++|     ..+++.++..|.++..+
T Consensus       169 ~l~g~~V~ViGa-G~iG-----~~aa~~a~~~Ga~V~~~  201 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAG-----LQAIATAKRLGAVVMAT  201 (384)
T ss_dssp             EECCCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCCCEEEEECC-CHHH-----HHHHHHHHHCCCEEEEE
Confidence            568999999996 8999     77777777777654443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=85.22  E-value=11  Score=30.63  Aligned_cols=103  Identities=17%  Similarity=0.133  Sum_probs=57.3

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhc-CCeeEEEeccCCC-HH-HHHHHHHH-------------HHHhcCCCccEEEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTK-CFKVTGSVCDASS-RA-EREKLMKQ-------------VSSLFNGKLNILIN   82 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~-~~~~~~~~~D~~~-~~-~~~~~~~~-------------i~~~~~~~id~lv~   82 (251)
                      +|.|+||+|.+|     ..++..+... +.....+-.|+.. .. ...++-+.             ..+.+ ...|++|.
T Consensus         2 KV~IiGAaG~VG-----~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-~~aDivii   75 (312)
T 3hhp_A            2 KVAVLGAAGGIG-----QALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPAL-EGADVVLI   75 (312)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHH-TTCSEEEE
T ss_pred             EEEEECCCCHHH-----HHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHh-CCCCEEEE
Confidence            688999999999     5555555443 3223455566653 11 11111110             11233 56899999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccc
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSV  137 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~  137 (251)
                      .+|...  .+  ..+   -.+.++.|..-...+.+.+..+   .+.+.++++|-.
T Consensus        76 ~ag~~r--kp--G~~---R~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           76 SAGVAR--KP--GMD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             CCSCSC--CT--TCC---HHHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             eCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            998643  21  122   3556677776665555555332   344778877653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=85.19  E-value=1.2  Score=32.76  Aligned_cols=34  Identities=15%  Similarity=0.166  Sum_probs=25.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-CCeeEEEe
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTK-CFKVTGSV   53 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~-~~~~~~~~   53 (251)
                      ++.++.++|.| .|.+|     ..+++.+.+. +.++..+.
T Consensus        36 ~~~~~~v~IiG-~G~~G-----~~~a~~L~~~~g~~V~vid   70 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIG-----TGAYDELRARYGKISLGIE   70 (183)
T ss_dssp             CCTTCSEEEEC-CSHHH-----HHHHHHHHHHHCSCEEEEE
T ss_pred             CCCCCcEEEEC-CCHHH-----HHHHHHHHhccCCeEEEEE
Confidence            45677888888 48899     7788888877 76665553

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=85.14  E-value=3.7  Score=33.58  Aligned_cols=62  Identities=15%  Similarity=0.066  Sum_probs=43.5

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEecc---------------C-------CCHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCD---------------A-------SSRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D---------------~-------~~~~~~~~~~~~i~   70 (251)
                      .++.||.|+|.|++.-+|     .-++..+...+..+.....+               .       ++++++.+.+    
T Consensus       173 ~~l~gk~vvVIG~G~iVG-----~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l----  243 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVG-----RPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCS----  243 (320)
T ss_dssp             CTTTTCEEEEECCCTTTH-----HHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCcchH-----HHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHh----
Confidence            378999999999998889     77777887777665443211               1       2234555555    


Q ss_pred             HhcCCCccEEEEcccCC
Q 041276           71 SLFNGKLNILINNVGTN   87 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~   87 (251)
                          ..-|+||.+.|..
T Consensus       244 ----~~ADIVIsAtg~p  256 (320)
T 1edz_A          244 ----LDSDVVITGVPSE  256 (320)
T ss_dssp             ----HHCSEEEECCCCT
T ss_pred             ----ccCCEEEECCCCC
Confidence                4689999999863

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=84.89  E-value=14  Score=29.91  Aligned_cols=105  Identities=11%  Similarity=0.071  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH-----------------HhcCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS-----------------SLFNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~-----------------~~~~~~id   78 (251)
                      ...+|.|+|+ |.+|     ..++-.+...+.--..+-.|+. ++..+....++.                 +.+ ...|
T Consensus         5 ~~~KI~IIGa-G~vG-----~~la~~l~~~~~~~ei~L~Di~-~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~-~~aD   76 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVG-----SSYAFSLVNQSIVDELVIIDLD-TEKVRGDVMDLKHATPYSPTTVRVKAGEYSDC-HDAD   76 (317)
T ss_dssp             CCCEEEEECC-SHHH-----HHHHHHHHHHCSCSEEEEECSC-HHHHHHHHHHHHHHGGGSSSCCEEEECCGGGG-TTCS
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHhCCCCCEEEEEeCC-hhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHh-CCCC
Confidence            4468999998 9999     4444445444421234445553 332222111111                 123 5689


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCG  139 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~  139 (251)
                      ++|..+|....+    ..+.   ...+..|..-.    +.+.+.+.+. +.+.++++|-...
T Consensus        77 vVvi~ag~~~~~----g~~r---~dl~~~n~~i~----~~i~~~i~~~~p~a~viv~tNPv~  127 (317)
T 3d0o_A           77 LVVICAGAAQKP----GETR---LDLVSKNLKIF----KSIVGEVMASKFDGIFLVATNPVD  127 (317)
T ss_dssp             EEEECCCCCCCT----TCCH---HHHHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             EEEECCCCCCCC----CCcH---HHHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCcHH
Confidence            999999875311    1222   23344444444    4444444443 4467777665443

>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}

Probab=84.79  E-value=1.8  Score=34.77  Aligned_cols=44  Identities=16%  Similarity=0.089  Sum_probs=38.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      ..|+++||++.+|.|+..-...++..+...|.++..+.+|+..+
T Consensus        91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~~~  134 (286)
T 3la6_A           91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRKG  134 (286)
T ss_dssp             TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTTTC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCCCC
Confidence            46899999999999977777788888888888999999998743

>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*

Probab=84.38  E-value=6.3  Score=29.16  Aligned_cols=41  Identities=7%  Similarity=0.044  Sum_probs=34.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS   58 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~   58 (251)
                      |++.|+++.||.|+..-...++..+...|.++..+.+|...
T Consensus         2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~   42 (206)
T 4dzz_A            2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM   42 (206)
T ss_dssp             EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence            68999999999998877778888888888889888888543

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=84.33  E-value=2  Score=34.76  Aligned_cols=59  Identities=22%  Similarity=0.214  Sum_probs=41.5

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTN   87 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~   87 (251)
                      .++.||.|+|.|++.-+|     .-++..+...+..+...  +-.. ..+.+.+        .+-|+||..+|..
T Consensus       161 i~l~gk~vvVIG~s~iVG-----~p~A~lL~~~gAtVtv~--hs~t-~~L~~~~--------~~ADIVI~Avg~p  219 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVG-----APMHDLLLWNNATVTTC--HSKT-AHLDEEV--------NKGDILVVATGQP  219 (301)
T ss_dssp             CCCTTCEEEEECCCTTTH-----HHHHHHHHHTTCEEEEE--CTTC-SSHHHHH--------TTCSEEEECCCCT
T ss_pred             CCCCCCEEEEECCCchHH-----HHHHHHHHhCCCeEEEE--ECCc-ccHHHHh--------ccCCEEEECCCCc
Confidence            468999999999999999     66777777777665544  3221 1222222        6899999999864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=83.95  E-value=0.4  Score=34.07  Aligned_cols=61  Identities=20%  Similarity=0.276  Sum_probs=38.1

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH----------HHhcCCCccEEEEcccC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV----------SSLFNGKLNILINNVGT   86 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i----------~~~~~~~id~lv~~ag~   86 (251)
                      +++|+|.|+ |++|     ..+++.+...+.++.  -+|. +++..+++.++.          .+.. ...|++|++.+.
T Consensus        21 ~~~v~iiG~-G~iG-----~~~a~~l~~~g~~v~--v~~r-~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLA-----SEIAPYFSYPQYKVT--VAGR-NIDHVRAFAEKYEYEYVLINDIDSLI-KNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHH-----HHHGGGCCTTTCEEE--EEES-CHHHHHHHHHHHTCEEEECSCHHHHH-HTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHH-----HHHHHHHHhCCCEEE--EEcC-CHHHHHHHHHHhCCceEeecCHHHHh-cCCCEEEEeCCC
Confidence            899999996 9999     667777766665533  3343 344444433322          2222 468999998875


Q ss_pred             C
Q 041276           87 N   87 (251)
Q Consensus        87 ~   87 (251)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=83.50  E-value=4.5  Score=32.43  Aligned_cols=58  Identities=22%  Similarity=0.177  Sum_probs=41.2

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .+++||.++|.|.|+-+|     ..++..+...+..+....-...+   +.+.       . ..-|+||...|.
T Consensus       157 i~l~Gk~vvVIG~s~iVG-----~p~A~lL~~~gAtVtv~hs~t~~---L~~~-------~-~~ADIVI~Avg~  214 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVG-----KPVSQLLLNAKATVTTCHRFTTD---LKSH-------T-TKADILIVAVGK  214 (285)
T ss_dssp             CCCTTCEEEEECCCTTTH-----HHHHHHHHHTTCEEEEECTTCSS---HHHH-------H-TTCSEEEECCCC
T ss_pred             CCCCCCEEEEECCCchhH-----HHHHHHHHHCCCeEEEEeCCchh---HHHh-------c-ccCCEEEECCCC
Confidence            468999999999999999     77777787777666444222111   2222       2 679999999985

>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*

Probab=83.01  E-value=2  Score=34.20  Aligned_cols=44  Identities=11%  Similarity=0.076  Sum_probs=37.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      ..|+++||++.+|.|+..-...++..+...|.++..+.+|+..+
T Consensus        81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~~  124 (271)
T 3bfv_A           81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKP  124 (271)
T ss_dssp             CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSSC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCCc
Confidence            45899999999999977777788888888888999999998754

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=82.92  E-value=2.4  Score=35.83  Aligned_cols=32  Identities=13%  Similarity=0.070  Sum_probs=23.7

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .+.+++|+|+|+ |.+|     ..+++.+...|.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG-----~~aa~~a~~~Ga~V~v  200 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAG-----LAAIGAANSLGAIVRA  200 (401)
T ss_dssp             EECCCEEEEECC-SHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CcCCCEEEEECC-CHHH-----HHHHHHHHHCCCEEEE
Confidence            367899999996 8899     6677777766654433

>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*

Probab=82.74  E-value=2  Score=33.46  Aligned_cols=40  Identities=18%  Similarity=0.102  Sum_probs=35.8

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA   56 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~   56 (251)
                      +|++.|+++.||.|+..-...++..+...|.++..+.+|.
T Consensus         2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~   41 (260)
T 3q9l_A            2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI   41 (260)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4899999999999988877888888888899999999997

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=82.67  E-value=3.5  Score=33.31  Aligned_cols=60  Identities=18%  Similarity=0.239  Sum_probs=40.9

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .+++||.|+|.|.|+-+|     ..++..+...+..+...  +-... .+.  ++   +.. ..-|+||...|.
T Consensus       161 i~l~Gk~vvVIG~s~iVG-----~p~A~lL~~~gAtVtv~--~~~T~-~l~--l~---~~~-~~ADIVI~Avg~  220 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVG-----APVAALLMKENATVTIV--HSGTS-TED--MI---DYL-RTADIVIAAMGQ  220 (300)
T ss_dssp             CCCTTCEEEEECCCTTTH-----HHHHHHHHHTTCEEEEE--CTTSC-HHH--HH---HHH-HTCSEEEECSCC
T ss_pred             CCCCCCEEEEECCCchHH-----HHHHHHHHHCCCeEEEE--eCCCC-Cch--hh---hhh-ccCCEEEECCCC
Confidence            468999999999999999     77777787777665443  33111 111  00   112 478999999995

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=82.67  E-value=3.9  Score=32.81  Aligned_cols=58  Identities=19%  Similarity=0.189  Sum_probs=41.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .+++||.|+|.|.|+-+|     ..++..+...+..+....-.-.+   +++.+        .+-|+||..+|.
T Consensus       157 i~l~Gk~vvVvGrs~iVG-----~plA~lL~~~gAtVtv~hs~T~~---L~~~~--------~~ADIVI~Avg~  214 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVG-----RPMALELLLGGCTVTVTHRFTRD---LADHV--------SRADLVVVAAGK  214 (286)
T ss_dssp             CCCTTCEEEEECTTSTTH-----HHHHHHHHHTTCEEEEECTTCSC---HHHHH--------HTCSEEEECCCC
T ss_pred             CCCCCCEEEEECCCchhH-----HHHHHHHHHCCCeEEEEeCCCcC---HHHHh--------ccCCEEEECCCC
Confidence            468999999999999899     77777777777666554322112   22222        468999999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=82.01  E-value=1.3  Score=36.02  Aligned_cols=32  Identities=22%  Similarity=0.393  Sum_probs=24.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEec
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVC   54 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~   54 (251)
                      ++ |||+||+|++|     ..+.+-.+..|.++.....
T Consensus       148 g~-VlV~Ga~G~vG-----~~aiqla~~~Ga~Vi~~~~  179 (324)
T 3nx4_A          148 GE-VVVTGASGGVG-----STAVALLHKLGYQVAAVSG  179 (324)
T ss_dssp             CC-EEESSTTSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred             Ce-EEEECCCcHHH-----HHHHHHHHHcCCEEEEEeC
Confidence            46 99999999999     7777777777776655443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=81.94  E-value=3.1  Score=34.73  Aligned_cols=62  Identities=18%  Similarity=0.273  Sum_probs=43.0

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH-------hcCCCccEEEEcc
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS-------LFNGKLNILINNV   84 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-------~~~~~id~lv~~a   84 (251)
                      +++||+|+|.|. |.+|     ..+++.+.+.|.++.  ..|. +++.++++.++.-.       .+..+.|+++.++
T Consensus       170 ~L~GktV~V~G~-G~VG-----~~~A~~L~~~GakVv--v~D~-~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a  238 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVA-----KALCKKLNTEGAKLV--VTDV-NKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA  238 (364)
T ss_dssp             CCTTCEEEEECC-SHHH-----HHHHHHHHHTTCEEE--EECS-CHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS
T ss_pred             CCCcCEEEEECc-hHHH-----HHHHHHHHHCCCEEE--EEcC-CHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc
Confidence            689999999997 6688     888999999888765  5564 45556655554211       1102578888775

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=81.59  E-value=2.5  Score=33.97  Aligned_cols=55  Identities=18%  Similarity=0.254  Sum_probs=38.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~   86 (251)
                      .++|.|.||.|.||     ..++..+...|.++..+  |.....+..+.       . ...|+||.+...
T Consensus        21 ~~~I~iIGg~G~mG-----~~la~~l~~~G~~V~~~--~~~~~~~~~~~-------~-~~aDvVilavp~   75 (298)
T 2pv7_A           21 IHKIVIVGGYGKLG-----GLFARYLRASGYPISIL--DREDWAVAESI-------L-ANADVVIVSVPI   75 (298)
T ss_dssp             CCCEEEETTTSHHH-----HHHHHHHHTTTCCEEEE--CTTCGGGHHHH-------H-TTCSEEEECSCG
T ss_pred             CCEEEEEcCCCHHH-----HHHHHHHHhCCCeEEEE--ECCcccCHHHH-------h-cCCCEEEEeCCH
Confidence            35799999999999     88888888888766655  43332222222       2 578999988753

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=81.57  E-value=20  Score=29.28  Aligned_cols=105  Identities=11%  Similarity=-0.022  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh-----------------cCCCcc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL-----------------FNGKLN   78 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-----------------~~~~id   78 (251)
                      ..++|.|+|+ |.+|     ..++..+...+.--..+-.|+ +.+..+....++...                 + ...|
T Consensus        20 ~~~kV~ViGa-G~vG-----~~~a~~la~~g~~~ev~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~-~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVG-----MADAISVLMKDLADEVALVDV-MEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVS-AGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHH-----HHHHHHHHHHCCCSEEEEECS-CHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSC-SSCS
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHhCCCCCeEEEEEC-CHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHh-CCCC
Confidence            4578999999 9999     666666655543114555676 444444433333221                 1 4578


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-CCCceEEEeccccc
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA-SGAGNIILVSSVCG  139 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~~~g~iv~vss~~~  139 (251)
                      ++|.++|....++    .+   -.+.+..|..-.    +.+.+.+.+ .+.+.++++|....
T Consensus        92 iVIitaG~p~kpG----~t---R~dll~~N~~I~----k~i~~~I~k~~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           92 LVVITAGARQQEG----ES---RLNLVQRNVNIF----KFIIPNIVKHSPDCLKELHPELGT  142 (330)
T ss_dssp             EEEECCSCCCCSS----CC---TTGGGHHHHHHH----HHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             EEEEeCCCCCCCC----CC---HHHHHHhhHHHH----HHHHHHHHhhCCCceEEeCCCccH
Confidence            9999999754221    11   112344444433    333344443 34577888776443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=81.44  E-value=3.5  Score=29.24  Aligned_cols=31  Identities=16%  Similarity=0.035  Sum_probs=21.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV   53 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~   53 (251)
                      .+.++|.|+ |.+|     ..+++.+.+.+.++..+.
T Consensus         3 ~~~vlI~G~-G~vG-----~~la~~L~~~g~~V~vid   33 (153)
T 1id1_A            3 KDHFIVCGH-SILA-----INTILQLNQRGQNVTVIS   33 (153)
T ss_dssp             CSCEEEECC-SHHH-----HHHHHHHHHTTCCEEEEE
T ss_pred             CCcEEEECC-CHHH-----HHHHHHHHHCCCCEEEEE
Confidence            467888886 8899     677777766665555443

>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}

Probab=80.92  E-value=2.8  Score=34.31  Aligned_cols=49  Identities=12%  Similarity=0.111  Sum_probs=39.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM   66 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   66 (251)
                      .+++++|++|-+|.|+..-...++..+...|.++..+.+|..  .++..++
T Consensus        17 ~~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~--~~l~~~l   65 (329)
T 2woo_A           17 TSLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA--HNLSDAF   65 (329)
T ss_dssp             TTCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT--CHHHHHH
T ss_pred             CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC--cCHHHHh
Confidence            458899999999999877777888888888999999999986  3444444

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=80.54  E-value=4.2  Score=32.78  Aligned_cols=18  Identities=17%  Similarity=0.346  Sum_probs=13.4

Q ss_pred             ccCCCCCEEEEecCCCCcC
Q 041276           12 RWSLQGMTALVTGGTKGLG   30 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG   30 (251)
                      ...+++++|+|.|+ ||+|
T Consensus        31 q~kL~~~~VlVvGa-GGlG   48 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVG   48 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHH
T ss_pred             HHHHhCCeEEEECc-CHHH
Confidence            34678899999987 5677

>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}

Probab=80.48  E-value=3.4  Score=33.28  Aligned_cols=43  Identities=16%  Similarity=0.012  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS   58 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~   58 (251)
                      ..|+++||+..+|.|+..-...++..+...|.++..+.+|...
T Consensus       103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r~  145 (299)
T 3cio_A          103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRR  145 (299)
T ss_dssp             SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence            4689999999999997777777888888888899999999854

>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A

Probab=80.22  E-value=4.6  Score=32.93  Aligned_cols=49  Identities=16%  Similarity=0.211  Sum_probs=41.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL   65 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   65 (251)
                      .+++++|+|. +|.|+...+..++..+...+.++..+.+|.......+.+
T Consensus       104 ~~~vI~ivG~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r~~a~~ql  152 (320)
T 1zu4_A          104 RLNIFMLVGV-NGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQL  152 (320)
T ss_dssp             SCEEEEEESS-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCSCHHHHHHH
T ss_pred             CCeEEEEECC-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHH
Confidence            5789999997 999988888888888888888999999999887665443

>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*

Probab=80.11  E-value=12  Score=27.41  Aligned_cols=73  Identities=12%  Similarity=0.110  Sum_probs=48.8

Q ss_pred             CcccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEecc-CCCHHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 041276           10 QDRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCD-ASSRAEREKLMKQVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~   88 (251)
                      +.+..++.++++|.|++|-+-   ..++....+++.+.......+- -..++.+.++.++..+   ..++++|-.||...
T Consensus         6 ~~~~~m~~~V~IimGS~SD~~---v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~---~g~~ViIa~AG~aa   79 (174)
T 3kuu_A            6 NSAYAAGVKIAIVMGSKSDWA---TMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEA---NGLHVIIAGNGGAA   79 (174)
T ss_dssp             CCSSCCCCCEEEEESSGGGHH---HHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTT---TTCSEEEEEEESSC
T ss_pred             cccccCCCcEEEEECcHHHHH---HHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHh---CCCcEEEEECChhh
Confidence            345566779999999999554   4456666666666554433332 3467777777766544   35889999998653

>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}

Probab=80.08  E-value=2.4  Score=34.57  Aligned_cols=42  Identities=19%  Similarity=0.151  Sum_probs=36.3

Q ss_pred             CC-CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC
Q 041276           16 QG-MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS   57 (251)
Q Consensus        16 ~~-k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~   57 (251)
                      .| ++++|+++-+|.|+..-...++..+...|.++..+.+|..
T Consensus        11 ~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~   53 (324)
T 3zq6_A           11 KGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA   53 (324)
T ss_dssp             TTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred             CCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            46 8999999999999877777888888888989999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	251
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-73
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-67
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-63
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	9e-61
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-59
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-56
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-56
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-55
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-54
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-54
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-54
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-53
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-53
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-53
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-52
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-52
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-51
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-51
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	7e-51
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-51
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-50
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-49
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-49
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	5e-48
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	7e-48
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-48
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-47
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-47
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-47
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-47
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-47
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	7e-47
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-46
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-46
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-46
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-45
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-45
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-45
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-45
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-44
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-43
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	8e-42
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-41
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-41
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-39
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-38
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-37
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-37
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-37
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-35
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-34
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	8e-34
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-32
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-31
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-31
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-27
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-27
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-26
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	6e-26
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-25
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-25
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-22
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-21
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-19
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-17
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-05

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  222 bits (566), Expect = 3e-73
 Identities = 166/257 (64%), Positives = 194/257 (75%), Gaps = 21/257 (8%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RWSL+  T LVTGGTKG+G                   NE ELNECL +W+ K F+VTGS
Sbjct: 3   RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGS 62

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCDAS R EREKLM+ VSS+F GKL+ILINN+G   + KPT++Y AED SF +STN ESA
Sbjct: 63  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLESA 121

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLSQLAHPLLKASG GNII +SS+ GV+S ++G+IY+ATKGA+NQLA+NLACEWA D I
Sbjct: 122 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R N+VAP  I TPL E    DE F + V  R P+ R GEP+EVSSLVAFLCMPAASYITG
Sbjct: 182 RANAVAPAVIATPLAEAVYDDE-FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITG 240

Query: 233 QTICVDGGFTVNGFFFR 249
           QTICVDGG TVNGF ++
Sbjct: 241 QTICVDGGLTVNGFSYQ 257

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  207 bits (529), Expect = 1e-67
 Identities = 131/258 (50%), Positives = 171/258 (66%), Gaps = 24/258 (9%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RW+L+G TALVTGG++G+G                   N+ ELN+CL +W++K FKV  S
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD SSR+ER++LM  V++ F+GKLNIL+NN G     K   +Y  ED S +MS NFE+A
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFEAA 121

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLS LAHP LKAS  GN++ +SSV G L+     +Y ATKGAM+QL + LA EWA+DNI
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181

Query: 173 RINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           R+N V P  I T L E  + D   ++ L ++  R  + R GEPKE++++VAFLC PAASY
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 241

Query: 230 ITGQTICVDGGFTVN-GF 246
           +TGQ I VDGG   N GF
Sbjct: 242 VTGQIIYVDGGLMANCGF 259

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  196 bits (500), Expect = 2e-63
 Identities = 133/259 (51%), Positives = 175/259 (67%), Gaps = 24/259 (9%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           RWSL+G TALVTGG+KG+G                   NE EL+ECL  W+ K   V GS
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           VCD  SR ER+KLM+ V+ +F+GKLNIL+NN       K   ++  +D + +M TNFE+A
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNN-AGVVIHKEAKDFTEKDYNIIMGTNFEAA 119

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           YHLSQ+A+PLLKAS  GN+I +SS+ G  +    ++Y+A+KGA+NQ+ K+LACEWA+DNI
Sbjct: 120 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 179

Query: 173 RINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
           R+NSVAP  I TPL E  +      ++ ++    +TPM R G+P+EVS+L+AFLC PAAS
Sbjct: 180 RVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAAS 239

Query: 229 YITGQTICVDGGFTVNGFF 247
           YITGQ I  DGGFT NG F
Sbjct: 240 YITGQIIWADGGFTANGGF 258

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  189 bits (482), Expect = 9e-61
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 29/250 (11%)

Query: 15  LQGMTALVTGGTKGLGNE------------------AELNECLREWKTKCFKVTGSVCDA 56
             G   LVTGG +G+G                     E  E         F+      D 
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQ-----VDL 57

Query: 57  SSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
               ER + +++ +    G++++L+NN          +     +   ++  N  +  HLS
Sbjct: 58  EDERERVRFVEEAAYAL-GRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 117 QLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINS 176
            LA   ++  G G I+ V+SV G+ +      Y A+KG +  L ++LA + A   IR+N+
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175

Query: 177 VAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           VAP  I T      ++     E+   + +    + R G+P+EV+  V FL    AS+ITG
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235

Query: 233 QTICVDGGFT 242
             + VDGG T
Sbjct: 236 AILPVDGGMT 245

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  187 bits (475), Expect = 1e-59
 Identities = 70/247 (28%), Positives = 103/247 (41%), Gaps = 23/247 (9%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+   A++TGG  G+G                     A   E     +    +V    CD
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLTVKCD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S   + E   KQV S F G+ +IL+NN G      P  E   E        N +S + +
Sbjct: 61  VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDSGFLM 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++   P +K +G G II ++S    L     T Y +TK A     + LA +  +D I +N
Sbjct: 119 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 178

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           ++AP  + T  TE       F         + R   P +++   AFL    AS+ITGQT+
Sbjct: 179 AIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 238

Query: 236 CVDGGFT 242
            VDGG  
Sbjct: 239 AVDGGMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  179 bits (456), Expect = 1e-56
 Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 34/262 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF---KVTGS 52
                A++TG + G+G                   +   L E  ++          V   
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNF 109
           V D ++ A +++++      F GKL+IL+NN G        K       E     ++ N 
Sbjct: 63  VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S   L++ A P L ++    + + S   G+ +T     Y+  K A++Q  +N A +  +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKF-------LEEVKCRTPMERPGEPKEVSSLVAFL 222
             IR+NS++P  + T         E+        +  +K   P    G+P++++ ++AFL
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241

Query: 223 C-MPAASYITGQTICVDGGFTV 243
                +SYI G  + VDGG ++
Sbjct: 242 ADRKTSSYIIGHQLVVDGGSSL 263

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  177 bits (450), Expect = 5e-56
 Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)

Query: 14  SLQGMTALVTGGTKGLGNE-AEL--------------NECLREWKTKCFKVTGSVCDASS 58
           +  G+ ALVTG  KG+G +  +               N  L     +C  +     D   
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 61

Query: 59  RAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQL 118
               EK +  +     G +++L+NN       +P +E   E      S N  S + +SQ+
Sbjct: 62  WDATEKALGGI-----GPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQVSQM 115

Query: 119 AHPLL-KASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSV 177
               +      G+I+ VSS+   ++      Y++TKGAM  L K +A E     IR+NSV
Sbjct: 116 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 175

Query: 178 APWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV 237
            P  + T + +   +D +F  ++K R P+ +  E ++V + + FL    ++  +G  I V
Sbjct: 176 NPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILV 235

Query: 238 DGGFT 242
           D G+ 
Sbjct: 236 DAGYL 240

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 1e-55
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 22/248 (8%)

Query: 15  LQGMTALVTGGTKGLGNE-AEL--------------NECLREWKTKCFKVTGSVCDASSR 59
             G   +VTGG +G+G                        R  + +       +CD +  
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQE 63

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            + + L+ +    F  +L+ ++NN G +   +   E  A+    L+  N    Y L++LA
Sbjct: 64  DDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
            P L+ S  GN+I +SS+ G +       Y ATKGA+  + K LA + +   +R+N ++P
Sbjct: 123 LPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 181

Query: 180 WFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
             I TPL E   +        + E     P+ R G+P EV +   FL    A++ TG  +
Sbjct: 182 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIEL 240

Query: 236 CVDGGFTV 243
            V GG  +
Sbjct: 241 LVTGGAEL 248

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  174 bits (442), Expect = 1e-54
 Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 27/250 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G T ++TGG +GLG                    + E     RE             D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQ---HLD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +   + ++++      F G ++ L+NN G   T         E    ++  N    +  
Sbjct: 60  VTIEEDWQRVVAYAREEF-GSVDGLVNNAG-ISTGMFLETESVERFRKVVEINLTGVFIG 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +   P +K +G G+I+ +SS  G++   L + Y A+K  +  L+K  A E   D IR+N
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG-EPKEVSSLVAFLCMPAASYITGQT 234
           SV P    TP+T    +  +  E     TPM R G EP E++  V  L    +SY+TG  
Sbjct: 178 SVHPGMTYTPMTAE--TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235

Query: 235 ICVDGGFTVN 244
           + VDGG+T  
Sbjct: 236 LAVDGGWTTG 245

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (439), Expect = 3e-54
 Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 30/249 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
            L G   LVTG  KG+G                    +A+L+  +RE    C  +     
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D       E+ +  V     G +++L+NN       +P +E   E        N  +   
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALL-QPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 115 LSQLAHPLLKASGAGN-IILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +SQ+    L A G    I+ VSS C   +    ++Y +TKGA++ L K +A E     IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+V P  + T + +   SD    + +  R P+ +  E + V + + FL    +   TG 
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS 233

Query: 234 TICVDGGFT 242
           T+ V+GGF 
Sbjct: 234 TLPVEGGFW 242

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  173 bits (439), Expect = 3e-54
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 23/253 (9%)

Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGS 52
           + L+G  ALVTGG++GLG                   N  E +E  ++   K   +    
Sbjct: 1   FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
            CD S+  E +KL++ V   F GKL+ ++N  G N    P  E+  ++   ++  N    
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRR-HPAEEFPLDEFRQVIEVNLFGT 118

Query: 113 YHLSQL-AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
           Y++ +     L ++     I + S     ++    + YAA+KG +  L K LA EW R  
Sbjct: 119 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 178

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           IR+N +AP +  T +TE   SD + L+ +  R P+ R G P+++  +  FL    A Y+T
Sbjct: 179 IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT 238

Query: 232 GQTICVDGGFTVN 244
           GQ I VDGG+T N
Sbjct: 239 GQIIFVDGGWTAN 251

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  172 bits (436), Expect = 2e-53
 Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 34/262 (12%)

Query: 15  LQGMTALVTGGTKGLGNE----------------------AELNECLREWKTKCFKVTGS 52
               T ++TG + G+G                         E  + + +      +V   
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNF 109
           V D ++   +++++      F GK+++L+NN G            +   +     +  N 
Sbjct: 63  VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
           ++   +++   P L AS    + + S V G  +      YA  K A++Q  ++ A + A+
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEK-------FLEEVKCRTPMERPGEPKEVSSLVAFL 222
             IR+NSV+P  + T  T      ++       F+   K   P+   G+P+ +++++ FL
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 223 CMPAAS-YITGQTICVDGGFTV 243
                S YI GQ+I  DGG ++
Sbjct: 242 ADRNLSFYILGQSIVADGGTSL 263

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  170 bits (433), Expect = 2e-53
 Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 26/250 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  A++TGGT G+G                   +     +  +   T   ++     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
           +S      KL       F G ++ L+NN G     K   E    +   L++ N +  +  
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 116 SQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA--RDNI 172
           ++L    +K  G G +II +SS+ G +       Y A+KGA+  ++K+ A + A    ++
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
           R+N+V P +I TPL +     E+ + +   +TPM   GEP +++ +  +L    + + TG
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMSQRT-KTPMGHIGEPNDIAYICVYLASNESKFATG 239

Query: 233 QTICVDGGFT 242
               VDGG+T
Sbjct: 240 SEFVVDGGYT 249

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  169 bits (429), Expect = 7e-53
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 29/248 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+    L+TG   G+G                    E  L E               V D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VMD 57

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A  E+   +  +   G+L+ +++  G         +   ED   ++  N   ++ +
Sbjct: 58  VADPASVERGFAEALAHL-GRLDGVVHYAGITRD-NFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++ A   ++    G+I+L +S   + +      YAA+   +  L + LA E  R  IR+N
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGNLGQ-ANYAASMAGVVGLTRTLALELGRWGIRVN 174

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           ++AP FI T +T      EK  E+    TP+ R G+P EV+    FL    +S+ITGQ +
Sbjct: 175 TLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVL 232

Query: 236 CVDGGFTV 243
            VDGG T+
Sbjct: 233 FVDGGRTI 240

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  169 bits (428), Expect = 1e-52
 Identities = 57/249 (22%), Positives = 112/249 (44%), Gaps = 23/249 (9%)

Query: 13  WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSV 53
           +  +   ALVTG  +G+G                    +   +  + E K+  ++ +G  
Sbjct: 6   YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S + E  +++ ++  L   K   ++ N          +    ++   ++ TN  S +
Sbjct: 66  GDVSKKEEISEVINKI--LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +++Q     +  +  G II +SS+ G+        Y+++K  +    K+LA E A  NI 
Sbjct: 124 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 183

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++AP FI++ +T+     E+  + +    P  R G P+EV++L  FL    + YI G+
Sbjct: 184 VNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGR 241

Query: 234 TICVDGGFT 242
              +DGG +
Sbjct: 242 VFVIDGGLS 250

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  168 bits (426), Expect = 2e-52
 Identities = 70/255 (27%), Positives = 104/255 (40%), Gaps = 30/255 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQG  ALVTGG  G+G                   NEA   +   E   +   V     D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            SS A+   +M  V     G LN+L+NN G             ED S L+  N ES +  
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIG 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD--NIR 173
            Q     +K +G G+II ++SV   L       Y+A+K A++ L +  A    +    IR
Sbjct: 119 CQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 174 INSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           +NS+ P  I TP+ +  L     ++ +          R   P+ ++ LV FL    +S +
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237

Query: 231 TGQTICVDGGFTVNG 245
           +G  +  D      G
Sbjct: 238 SGSELHADNSILGMG 252

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  167 bits (423), Expect = 1e-51
 Identities = 68/265 (25%), Positives = 101/265 (38%), Gaps = 38/265 (14%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L+G   L+TGG  GLG                   +   L E   +       +   V D
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGI---VGD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF----LMSTNFES 111
             S  ++++   +  + F GK++ LI N G    +   V+   E L      +   N + 
Sbjct: 60  VRSLEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
             H  +   P L AS  GN+I   S  G      G +Y A K A+  L + LA E A   
Sbjct: 119 YIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAP-Y 176

Query: 172 IRINSVAPWFITTPLTEP--------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
           +R+N V    I + L  P         +S     + +K   P+ R  E +E +    F  
Sbjct: 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA 236

Query: 224 MPA-ASYITGQTICVDGGFTVNGFF 247
               A+  TG  +  DGG  V GFF
Sbjct: 237 TRGDAAPATGALLNYDGGLGVRGFF 261

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  165 bits (419), Expect = 5e-51
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 32/260 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNEC---LREWKTKCFKVTGS 52
             G + ++TG + G+G                   NE  L E    + +      K+   
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFES 111
           V D +  + ++ ++    + F GK++IL+NN G N            E        NF++
Sbjct: 62  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              ++Q     L  +    + + S V G  + +    YA  K A++Q  +  A +  +  
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 172 IRINSVAPWFITTPLTEPYLSDE-------KFLEEVKCRTPMERPGEPKEVSSLVAFLC- 223
           +R+NSV+P  + T         E        F+   K   P+   G+P+E+++++ FL  
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 224 MPAASYITGQTICVDGGFTV 243
              +SYI GQ+I  DGG T+
Sbjct: 241 RNLSSYIIGQSIVADGGSTL 260

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (420), Expect = 7e-51
 Identities = 72/261 (27%), Positives = 109/261 (41%), Gaps = 29/261 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF-----KVT 50
           LQG  A+VTGG  G+G                       L     E +         +V 
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 51  GSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFE 110
              C+  +  E   L+K     F GK+N L+NN G  +   P     ++    ++ TN  
Sbjct: 70  PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFL-SPAEHISSKGWHAVLETNLT 127

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
             +++ +  +        G+I+ +               AA +  +  L K+LA EWA  
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA-RAGVYNLTKSLALEWACS 186

Query: 171 NIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS 228
            IRIN VAP  I +           + F E    + P +R G P+EVSS+V FL  PAAS
Sbjct: 187 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 246

Query: 229 YITGQTICVDGGFTVNGFFFR 249
           +ITGQ++ VDGG ++    + 
Sbjct: 247 FITGQSVDVDGGRSLYTHSYE 267

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  164 bits (417), Expect = 8e-51
 Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 32/258 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSV 53
           S    T +VTGG +G+G                   + A+  E   +   +   K     
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD S+     K ++Q+ +   G ++ LI N G +   KP  E   ED +F+   N    +
Sbjct: 66  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVV-KPATELTHEDFAFVYDVNVFGVF 123

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI--------YAATKGAMNQLAKNLAC 165
           +  +    L         I+V+S       N  ++        Y ++K A + L K LA 
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 183

Query: 166 EWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           EWA   IR+N+++P ++ T  T     D+K  +      P+ R  +P+E++     L   
Sbjct: 184 EWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSD 241

Query: 226 AASYITGQTICVDGGFTV 243
            A+Y+TG    +DGG  +
Sbjct: 242 HATYMTGGEYFIDGGQLI 259

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  162 bits (412), Expect = 3e-50
 Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 32/254 (12%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           TA+VT      G                   +  + +E       + F  T       S 
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 55

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            E  +L++ V+S + G++++L++N       +P  +Y  ED    +       + L    
Sbjct: 56  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
              +K   +G+II ++S          + Y + +     LA  L+ E    NI + ++ P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174

Query: 180 WFITTPLT------EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
            ++ +  +      EP+ ++ + +  VK  T ++R G  KE+  LVAFL   +  Y+TGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234

Query: 234 TICVDGGFTVNGFF 247
              + GGF +   +
Sbjct: 235 VFWLAGGFPMIERW 248

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (405), Expect = 3e-49
 Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 25/248 (10%)

Query: 15  LQGMTALVTGGTKGLGNE--------------AELNECLREWKTKCFKVTGSVCDASSRA 60
           L G   ++T   +G+G                 ++NE   +   K   +   V D + + 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKK 63

Query: 61  EREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH 120
           + ++   +V      +L++L N  G  +     ++   +D  F M+ N  S Y + +   
Sbjct: 64  QIDQFANEVE-----RLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 121 PLLKASGAGNIILVSSVCGVLS-TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
           P + A  +GNII +SSV   +       +Y+ TK A+  L K++A ++ +  IR N V P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 180 WFITTPLTEPYLSDEK----FLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
             + TP  +  +           +   R    R    +E++ L  +L    ++Y+TG  +
Sbjct: 178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPV 237

Query: 236 CVDGGFTV 243
            +DGG+++
Sbjct: 238 IIDGGWSL 245

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 4e-49
 Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 31/253 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSV 53
            +   ALVTG + G+G                       + E   E K+  +   +    
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD S+  +   +   + S     ++I INN G        +         + + N  +  
Sbjct: 68  CDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLALS 125

Query: 114 HLSQLAHPLLKASGA--GNIILVSSVCGVLSTNLG--TIYAATKGAMNQLAKNLACEW-- 167
             ++ A+  +K      G+II ++S+ G     L     Y+ATK A+  L + L  E   
Sbjct: 126 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 185

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           A+ +IR   ++P  + T         +K  E+        +  +P++V+  V ++    A
Sbjct: 186 AQTHIRATCISPGVVETQFAFK--LHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 243

Query: 228 SYITGQTICVDGG 240
               G       G
Sbjct: 244 HIQIGDIQMRPTG 256

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  157 bits (399), Expect = 5e-48
 Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 26/258 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           LQ   A++TGG  G+G                    +    +      +    ++   CD
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLS-FLMSTNFESAYH 114
            +   +   L+    +   GKL+I+  NVG   TT  ++     +    +M  N   A+ 
Sbjct: 63  VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           +++ A  ++  +  G+I+  +S+        +  +Y ATK A+  L  +L  E     IR
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 174 INSVAPWFITTPLTEPYLS-DEKFLEEV--KCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
           +N V+P+ + +PL       D   +EE+  +           ++V+  VA+L    + Y+
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241

Query: 231 TGQTICVDGGFTVNGFFF 248
           +G  + +DGG+T     F
Sbjct: 242 SGLNLVIDGGYTRTNPAF 259

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  157 bits (397), Expect = 7e-48
 Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSV 53
                 L+TGG  GLG                   +   L              +V  +V
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  A+ E  +   +  F G+++   NN G      PT  + A +   ++S N    +
Sbjct: 62  ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
              +    +++  G+G ++  +SV G+      + YAA K  +  L +N A E+ R  IR
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 174 INSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA 227
           IN++AP  I TP+ E  +         K  EE     P +R GE  E++++VAFL    A
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

Query: 228 SYITGQTICVDGGFT 242
           SY+    + +DGG +
Sbjct: 241 SYVNATVVPIDGGQS 255

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  156 bits (396), Expect = 9e-48
 Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 23/250 (9%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L+G   ++TG + GLG                     E E N  L E K    +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D +  ++   L++     F GKL+++INN G       + E    D + ++ TN   A+ 
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 115 LSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            S+ A          G +I +SSV   +   L   YAA+KG M  + + LA E+A   IR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N++ P  I TP+     +D +   +V+   PM   GEP+E++++ A+L    ASY+TG 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGI 242

Query: 234 TICVDGGFTV 243
           T+  DGG T+
Sbjct: 243 TLFADGGMTL 252

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  156 bits (395), Expect = 1e-47
 Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 34/259 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
             G   LVTG    +G                   N   L +     + K  +    VCD
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +S       +  V   F GK++ L NN G      P  +Y ++D + +++ N   A+H+
Sbjct: 63  VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +     +     G I+  +S+ GV        Y  +KGA+  L +  A + A  NIR+N
Sbjct: 122 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 181

Query: 176 SVAPWFITTPLTEPYLSD--------------EKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           +++P ++          +              +   +++    PM R G+  E+  +VAF
Sbjct: 182 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 241

Query: 222 LCMPAASYITGQTICVDGG 240
           L    +S++TG  + + GG
Sbjct: 242 LLGDDSSFMTGVNLPIAGG 260

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  156 bits (396), Expect = 1e-47
 Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 34/260 (13%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
           SL+G  ALVTG  +G+G                    +     E +   K          
Sbjct: 15  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            +     +  ++ ++   +F GKL+I+ +N G         +   E+   + + N    +
Sbjct: 75  ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSF-GHVKDVTPEEFDRVFTINTRGQF 132

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            +++ A+  L+  G   ++   +           +Y+ +KGA+   A+ +A + A   I 
Sbjct: 133 FVAREAYKHLEIGGRLILMGSITGQAKAVPKHA-VYSGSKGAIETFARCMAIDMADKKIT 191

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEE-----------VKCRTPMERPGEPKEVSSLVAFL 222
           +N VAP  I T +      +     E               +P+ R G P +++ +V FL
Sbjct: 192 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL 251

Query: 223 CMPAASYITGQTICVDGGFT 242
                 ++TG+ I +DGG  
Sbjct: 252 ASNDGGWVTGKVIGIDGGAC 271

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  156 bits (394), Expect = 2e-47
 Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 32/256 (12%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
              ALVTG T G+G                    E  L   L+E +    +  G  CD  
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 58  SRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQ 117
           S  E E L+  V   + G +++L+NN G       T E   E    ++ TN    + +++
Sbjct: 62  SVPEIEALVAAVVERY-GPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRVTK 119

Query: 118 LAHPL--LKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
                  +   G G I+ ++S  G         Y+A+K  +    K L  E AR  I +N
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 179

Query: 176 SVAPWFITTPLTEPYL---------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
           +V P F+ TP+              S E+  + +  R P+ R  +P EV+ +VA+L  P 
Sbjct: 180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239

Query: 227 ASYITGQTICVDGGFT 242
           A+ +T Q + V GG  
Sbjct: 240 AAAVTAQALNVCGGLG 255

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  156 bits (396), Expect = 4e-47
 Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 46/263 (17%)

Query: 15  LQGMTALVTGGTKGLG----------------------------NEAELNECLREWKTKC 46
             G   LVTG   GLG                              +  ++ + E + + 
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 47  FKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMS 106
            K   +     +    EKL+K     F G++++++NN G     +       ED   +  
Sbjct: 65  GKAVANYDSVEAG---EKLVKTALDTF-GRIDVVVNNAGIL-RDRSFSRISDEDWDIIQR 119

Query: 107 TNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACE 166
            +   ++ +++ A   +K    G II+ +S  G+        Y+A K  +  LA  L  E
Sbjct: 120 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 179

Query: 167 WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA 226
             ++NI  N++AP   +                      +    +P+ V+ LV +LC  +
Sbjct: 180 GRKNNIHCNTIAPNAGSRMTETVM------------PEDLVEALKPEYVAPLVLWLCHES 227

Query: 227 ASYITGQTICVDGGFTVNGFFFR 249
                G    V  G+     + R
Sbjct: 228 C-EENGGLFEVGAGWIGKLRWER 249

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  154 bits (391), Expect = 5e-47
 Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 23/253 (9%)

Query: 9   RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKV 49
             D   L G  A++TG   G+G                   N    N  + E +    + 
Sbjct: 3   NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA 62

Query: 50  TGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNF 109
               CD +S  E   L     S   GK++IL+NN G         +    D       N 
Sbjct: 63  FACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPK--PFDMPMADFRRAYELNV 119

Query: 110 ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            S +HLSQL  P ++ +G G I+ ++S+         T YA++K A + L +N+A +   
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
            NIR+N +AP  I T   +  ++ E   +++   TP+ R G+P+++++   FLC PAAS+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVITPE-IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238

Query: 230 ITGQTICVDGGFT 242
           ++GQ + V GG  
Sbjct: 239 VSGQILTVSGGGV 251

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  155 bits (393), Expect = 7e-47
 Identities = 60/251 (23%), Positives = 99/251 (39%), Gaps = 22/251 (8%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC-FKVTGSV 53
           S QG  A +TGG  GLG                       L     +  ++   KV    
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
           CD       +  + ++  +  G  NI+INN   N+ +           +        +A+
Sbjct: 82  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
              ++   L+KA      + ++++     +      A+ K  +  ++K+LA EW +  +R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200

Query: 174 INSVAPWFITTPLTEPYL-SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG 232
            N + P  I T      L     F +E+  R P  R G  +E+++L AFLC   AS+I G
Sbjct: 201 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 260

Query: 233 QTICVDGGFTV 243
             I  DGG  V
Sbjct: 261 AVIKFDGGEEV 271

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  153 bits (388), Expect = 2e-46
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 36/258 (13%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L G  AL TG  +G+G                    +     E + E K    +      
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S  +E   L  +  S F G L+ +++N G        +E   E    + + N    + 
Sbjct: 64  DISKPSEVVALFDKAVSHF-GGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA-TKGAMNQLAKNLACEWARDNIR 173
           ++Q      +  G   +    +   V++        A +K A+    +  A +     + 
Sbjct: 122 VAQQGLKHCRRGGRIILTSSIA--AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 179

Query: 174 INSVAPWFITTPLTE-----------PYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL 222
           +N +AP  + T + +             +  EK  E +    P++R G P ++   V+ L
Sbjct: 180 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 239

Query: 223 CMPAASYITGQTICVDGG 240
           C   + +I GQ I + GG
Sbjct: 240 CQEESEWINGQVIKLTGG 257

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  152 bits (384), Expect = 4e-46
 Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 29/248 (11%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G T LVTG   G+G                    E  L E +   + +   V   V D
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            S     E +  +    F G+L+ + +  G  ++   +     E    ++  N   ++ +
Sbjct: 60  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFLV 117

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           ++ A  +L+  G+  +         L       YAA K  +  LA+ LA E AR  +R+N
Sbjct: 118 ARKAGEVLEEGGSLVLT---GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 174

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
            + P  I TP+T          E+    +P+ R G P+EV+    FL    ++YITGQ +
Sbjct: 175 VLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQAL 232

Query: 236 CVDGGFTV 243
            VDGG ++
Sbjct: 233 YVDGGRSI 240

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  151 bits (383), Expect = 6e-46
 Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 25/245 (10%)

Query: 20  ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            +VTG ++G+G                    +     E  ++ +    +      D S  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
           A+ E +MK       G +++ + N          +         ++  N    +  +Q A
Sbjct: 64  ADVEAMMKTAID-AWGTIDV-VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 120 HPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAP 179
             ++     G II ++SV G++       YAA K  +   +K  A E A  NI +N V P
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181

Query: 180 WFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM-PAASYITGQTICVD 238
            FI + +T     D +  +++    P+ R G+P+ V+ LV FL + PAASYITGQ   +D
Sbjct: 182 GFIASDMTAKLGEDME--KKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTID 239

Query: 239 GGFTV 243
           GG  +
Sbjct: 240 GGIAI 244

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  150 bits (381), Expect = 1e-45
 Identities = 68/247 (27%), Positives = 106/247 (42%), Gaps = 31/247 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G  ALV+GG +G+G                    + E      E       V     D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +  A+ +  +    + F G L++L+NN G         +Y   +   ++  N    +  
Sbjct: 61  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGI-LNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
            +     +K +G G+II +SS+ G+  T     Y ATK A+  L K+ A E     IR+N
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
           S+ P  + TP+T+       ++ E   +T + R  EP EVS+LV +L    +SY TG   
Sbjct: 179 SIHPGLVKTPMTD-------WVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 231

Query: 236 CVDGGFT 242
            VDGG  
Sbjct: 232 VVDGGTV 238

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  150 bits (379), Expect = 3e-45
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 33/259 (12%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSV 53
           L+G  A+VTG T G+G                    +A   E +R         KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S       L+        G+++IL+NN      T    ++  E    +++ N  + +
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNA-GIQHTALIEDFPTEKWDAILALNLSAVF 119

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
           H +  A P +K  G G II ++S  G++++   + Y A K  +    K  A E A   I 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 174 INSVAPWFITTPLTEPYLS----------DEKFLEEVKCRTPMERPGEPKEVSSLVAFLC 223
            N++ P ++ TPL E  +S          +    E +  + P  +   P+++     FL 
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 224 MPAASYITGQTICVDGGFT 242
             AA+ ITG T+ VDGG+T
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  149 bits (376), Expect = 6e-45
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 26/248 (10%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
            +G  ALVTG ++G+G                   +E                +  +V D
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +S     + ++       G+++IL+NN          +    E+ + ++ TN  S + L
Sbjct: 62  PASIESVLEKIRA----EFGEVDILVNN-AGITRDNLLMRMKDEEWNDIIETNLSSVFRL 116

Query: 116 SQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRIN 175
           S+     +     G II + SV G +       YAA K  +   +K+LA E A   I +N
Sbjct: 117 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 176

Query: 176 SVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTI 235
            VAP FI T +T     D++    +  + P  R G  +E+++ VAFL    A+YITG+T+
Sbjct: 177 VVAPGFIETDMTRALSDDQR--AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 234

Query: 236 CVDGGFTV 243
            V+GG  +
Sbjct: 235 HVNGGMYM 242

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (377), Expect = 6e-45
 Identities = 48/259 (18%), Positives = 94/259 (36%), Gaps = 44/259 (16%)

Query: 17  GMTALVTGGTKGLG-------------------NEAELNECLREWKTKCF--KVTGSVCD 55
           G  ALVTG  +G+G                   N     +C      +    K     CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + + +     ++V   F G+L+IL+NN G             ++    +  N  S    
Sbjct: 63  VADQQQLRDTFRKVVDHF-GRLDILVNNAG---------VNNEKNWEKTLQINLVSVISG 112

Query: 116 SQLAHPLLKASGA---GNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKN--LACEWARD 170
           + L    +        G II +SS+ G++      +Y A+K  +    ++  LA      
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 172

Query: 171 NIRINSVAPWFITTPLTEPYLSDE------KFLEEVKCRTPMERPGEPKEVSSLVAFLCM 224
            +R+N++ P F+ T + E    +E      ++ + +K         +P  +++ +  L  
Sbjct: 173 GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE 232

Query: 225 PAASYITGQTICVDGGFTV 243
             A  + G  + +     +
Sbjct: 233 DDA--LNGAIMKITTSKGI 249

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  147 bits (371), Expect = 3e-44
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 19/238 (7%)

Query: 15  LQGMTALVTGGTKGLGNEA--ELNE--------CLREWKTKCFKVTGSVCDASSRAEREK 64
           ++    LV   ++G+G      L++           E   K       VCD   R + + 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDL--RKDLDL 59

Query: 65  LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
           L ++V      +++IL+ N           E   ED    + + F +   + +   P +K
Sbjct: 60  LFEKV-----KEVDILVLN-AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK 113

Query: 125 ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
             G G I+ ++S   +          + + A+    K L+ E A   I +N VAP +  T
Sbjct: 114 EKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTET 173

Query: 185 PLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
              +  L  E+  ++V+ + PM R  +P+E++S+VAFLC   ASY+TGQTI VDGG +
Sbjct: 174 ERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 230

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  144 bits (364), Expect = 4e-43
 Identities = 53/254 (20%), Positives = 90/254 (35%), Gaps = 26/254 (10%)

Query: 15  LQGMTALVTGGT--KGLG------------------NEAELNECLREWKTKCFKVTGSVC 54
           L G  ALV G T  + LG                      L     +             
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFES 111
           D +   E + L   V     G L+ L++ +            ++   +D    +  +  S
Sbjct: 66  DVTQDEELDALFAGVKE-AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124

Query: 112 AYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDN 171
              +++ A PLL+  G   I+ ++            + A  K A+    + LA E     
Sbjct: 125 LVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKG 182

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           +R+N+++   + T          K  + V    P+ R    +EV +L  FL  P AS IT
Sbjct: 183 VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGIT 242

Query: 232 GQTICVDGGFTVNG 245
           G+ + VD G+ + G
Sbjct: 243 GEVVYVDAGYHIMG 256

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  141 bits (356), Expect = 8e-42
 Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 31/255 (12%)

Query: 19  TALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
            ALVTG  +G+G                   N+A       E             D S R
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
            +    ++Q      G  ++++NN G   +  P      E +  + + N +      Q A
Sbjct: 63  DQVFAAVEQARKTL-GGFDVIVNNAGVAPS-TPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 120 HPLLKASGAGNIILVSSVC-GVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVA 178
               K  G G  I+ +    G +      +Y+++K A+  L +  A + A   I +N   
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 180

Query: 179 PWFITTPLTEPYLSD---------EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
           P  + TP+                     E   R  + R  EP++V++ V++L  P + Y
Sbjct: 181 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 240

Query: 230 ITGQTICVDGGFTVN 244
           +TGQ++ +DGG   N
Sbjct: 241 MTGQSLLIDGGMVFN 255

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  140 bits (353), Expect = 2e-41
 Identities = 41/253 (16%), Positives = 71/253 (28%), Gaps = 37/253 (14%)

Query: 14  SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSV 53
            L     +      G+G                     E        +       +T   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 54  CD-ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
            D     AE +KL+K++       ++ILIN  G               +   ++ NF   
Sbjct: 62  YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGI---------LDDHQIERTIAINFTGL 111

Query: 113 YHLSQLAHPLLKAS---GAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR 169
            + +               G I  + SV G  + +   +Y+A+K A+     +LA     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY 229
             +   S+ P    TPL   + S       V     +  P +  E             + 
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVA-ELLLSHPTQTSEQ--CGQNFVKAIEAN 228

Query: 230 ITGQTICVDGGFT 242
             G    +D G  
Sbjct: 229 KNGAIWKLDLGTL 241

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  139 bits (351), Expect = 3e-41
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 14/236 (5%)

Query: 14  SLQGMTALVTGGTKGLGNE---------AELNECLREWKTKCFKVTGSVCDASSRAEREK 64
                + LVTGG +G+G            ++    R        + G   D +     ++
Sbjct: 4   PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-SGAPKGLFGVEVDVTDSDAVDR 62

Query: 65  LMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK 124
               V       + +L++N          +    E    +++ N   A+ ++Q A   ++
Sbjct: 63  AFTAVEEHQG-PVEVLVSN-AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQ 120

Query: 125 ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
            +  G +I + SV G+        YAA+K  +  +A+++A E ++ N+  N VAP +I T
Sbjct: 121 RNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDT 180

Query: 185 PLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG 240
            +T     DE+  +      P +R G P EV+ +V+FL    ASYI+G  I VDGG
Sbjct: 181 DMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 1e-39
 Identities = 55/256 (21%), Positives = 91/256 (35%), Gaps = 46/256 (17%)

Query: 12  RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGS 52
           R S+ G   L+TG   G+G                   N+  L E   + K    KV   
Sbjct: 2   RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 61

Query: 53  VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESA 112
           V D S+R +     K+V +   G ++IL+NN G  YT           +      N  + 
Sbjct: 62  VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLAH 119

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWAR--- 169
           +  ++   P +  +  G+I+ V+S  G +S      Y ++K A     K L  E A    
Sbjct: 120 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 179

Query: 170 DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVA--------- 220
             ++   + P F+ T   +               T +    EP+EV + +          
Sbjct: 180 TGVKTTCLCPNFVNTGFIK------------NPSTSLGPTLEPEEVVNRLMHGILTEQKM 227

Query: 221 -FLCMPAASYITGQTI 235
            F+    A   T + I
Sbjct: 228 IFIPSSIAFLTTLERI 243

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  133 bits (334), Expect = 1e-38
 Identities = 59/259 (22%), Positives = 98/259 (37%), Gaps = 34/259 (13%)

Query: 15  LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCD 55
           L G TAL+TG  +G+G                   N         E       +     D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI---ALD 59

Query: 56  ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            + +A  ++ + ++   + G ++IL+NN    +   P VE   E    L + N      +
Sbjct: 60  VTDQASIDRCVAELLDRW-GSIDILVNNA-ALFDLAPIVEITRESYDRLFAINVSGTLFM 117

Query: 116 SQLAHPLL-KASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
            Q     +      G II ++S  G     L  +Y ATK A+  L ++      R  I +
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 175 NSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP 225
           N++AP  +     +           L   +   +V    P  R G  ++++ +  FL  P
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237

Query: 226 AASYITGQTICVDGGFTVN 244
            A YI  QT  VDGG  ++
Sbjct: 238 EADYIVAQTYNVDGGNWMS 256

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  130 bits (327), Expect = 1e-37
 Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 41/249 (16%)

Query: 20  ALVTGGTKGLG--------------------------NEAELNECLREWKTKCFKVTGSV 53
            L+TG  KG+G                            A+L +   E + +        
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
            D S  A+  +L   +   + G ++ L+NN           +   ED  + M+TN +  +
Sbjct: 64  ADISDMADVRRLTTHIVERY-GHIDCLVNNA-GVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR 173
            L+Q    L++   +G+I  ++SV    +    +IY  +K     L + +     + N+R
Sbjct: 122 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 181

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           I  V P  + TP+    + DE                 P+++++ V    +  +  +  +
Sbjct: 182 ITDVQPGAVYTPMWGK-VDDE----------MQALMMMPEDIAAPVVQAYLQPSRTVVEE 230

Query: 234 TIC--VDGG 240
            I     G 
Sbjct: 231 IILRPTSGD 239

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  130 bits (326), Expect = 2e-37
 Identities = 43/255 (16%), Positives = 92/255 (36%), Gaps = 27/255 (10%)

Query: 15  LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVC 54
           L G   LVTG    L                        +L   + E+  +        C
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEY----MAEDLSFLMSTNFE 110
           D +  A  + +  ++      K +  ++++G     +   +Y      E        +  
Sbjct: 63  DVAEDASIDTMFAELGK-VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 111 SAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARD 170
           S   +++    +L    A  ++ +S +    +     +    K ++    + +A     +
Sbjct: 122 SFVAMAKACRSMLNPGSA--LLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 171 NIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI 230
            +R+N+++   I T          K L   +  TP+ R    ++V +  AFLC   ++ I
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI 239

Query: 231 TGQTICVDGGFTVNG 245
           +G+ + VDGGF++  
Sbjct: 240 SGEVVHVDGGFSIAA 254

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  129 bits (324), Expect = 3e-37
 Identities = 49/239 (20%), Positives = 85/239 (35%), Gaps = 19/239 (7%)

Query: 19  TALVTGGTKGLGNE-AEL------NECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS 71
           +ALVTGG  GLG   A           + + + +   +     D +   +  + + +   
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE 62

Query: 72  LFNGKLNILINNVGT-NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL------LK 124
                  +    VG           +  E    ++  N    +++ +LA           
Sbjct: 63  EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDA 122

Query: 125 ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITT 184
               G I+  +SV           YAA+KG +  L    A E A   IR+ +VAP    T
Sbjct: 123 EGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT 182

Query: 185 PLTEPYLSDEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT 242
           PL +      K    +  + P   R G P+E ++LV  +       + G+ + +DG   
Sbjct: 183 PLLQGLPEKAK--ASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLNGEVVRLDGALR 237

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  123 bits (310), Expect = 7e-35
 Identities = 50/266 (18%), Positives = 89/266 (33%), Gaps = 46/266 (17%)

Query: 19  TALVTGGTKGLG--------------------NEAELNECLREWKTK-----CFKVTGSV 53
            A++TGG + +G                    +E      + E                 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSF---------- 103
             +S     E ++      F G+ ++L+NN    Y T           +           
Sbjct: 63  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 104 -----LMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ 158
                 ++  F       +        S   +++ +      L      +Y   K A+  
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP-GEPKEVSS 217
           L +  A E A  +IR+N+VAP     P   P    ++  EE + + P+ +      +++ 
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRRKVPLGQSEASAAQIAD 237

Query: 218 LVAFLCMPAASYITGQTICVDGGFTV 243
            +AFL    A YITG T+ VDGG  +
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLIL 263

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  121 bits (304), Expect = 4e-34
 Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 37/256 (14%)

Query: 14  SLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTKCF--KV 49
            L     ++TG ++G G                      +E+ L +   E   +    KV
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 50  TGSVCDASSRAEREK---LMKQVSSLFNGKLNILINNVGTNY--TTKPTVEYMAEDLSFL 104
             +  D  + A  ++    ++++      +  +LINN  T    +          +++  
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 105 MSTNFESAYHLSQLAHPLLKASGAGNII--LVSSVCGVLSTNLGTIYAATKGAMNQLAKN 162
            + N  S   L+       + S   +     +SS+C +       +Y A K A + L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 163 LACEWARDNIRINSVAPWFITTPLTE---PYLSDEKFLEEVKCRTPMERPGEPKEVSSLV 219
           LA E    ++R+ S AP  +   + +       D +   +++         +    +  +
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 220 AFLCMPAASYITGQTI 235
             L     ++ +G  +
Sbjct: 241 LGLL-QKDTFQSGAHV 255

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  120 bits (302), Expect = 8e-34
 Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 33/251 (13%)

Query: 20  ALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-------VCDASSRAEREKLMKQVSSL 72
            +++G   G+G         +  +    ++ G        + D S+   R++ +  V + 
Sbjct: 4   IVISGCATGIGAA-----TRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAK 58

Query: 73  FNGKLNILINNVGTNYTTKPTVEYMAEDL-------------------SFLMSTNFESAY 113
            +  ++ L+   G    TK     ++ +                       +  +  ++ 
Sbjct: 59  CSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTI-YAATKGAMNQLAKNLACEWARDNI 172
           HL+   +PL  A  AG      ++        G + YA +K A+    +  A  W    +
Sbjct: 119 HLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGV 178

Query: 173 RINSVAPWFITTPLTEPYLSDEKFLEEV-KCRTPMERPGEPKEVSSLVAFLCMPAASYIT 231
           R+N++AP    TPL +  L D ++ E + K   PM R  EP E++S++AFL  PAASY+ 
Sbjct: 179 RLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVH 238

Query: 232 GQTICVDGGFT 242
           G  I +DGG  
Sbjct: 239 GAQIVIDGGID 249

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 2e-32
 Identities = 49/251 (19%), Positives = 87/251 (34%), Gaps = 31/251 (12%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVC 54
           S++G+ A++TGG  GLG                     +      ++    C      V 
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 55  DASSRAEREKLMKQVSSLFNGKL-NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
                     L K      +  +    I      Y  K    +  ED   ++  N    +
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 114 HLSQLAHPLLKAS------GAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
           ++ +L    +  +        G II  +SV           Y+A+KG +  +   +A + 
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 168 ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-RPGEPKEVSSLVAFLCMPA 226
           A   IR+ ++AP    TPL       EK    +  + P   R G+P E + LV  +    
Sbjct: 182 APIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAII--E 237

Query: 227 ASYITGQTICV 237
             ++ G+ I +
Sbjct: 238 NPFLNGEVIRL 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 2e-31
 Identities = 38/259 (14%), Positives = 77/259 (29%), Gaps = 47/259 (18%)

Query: 20  ALVTGGTKGLG-------------------------NEAELNECLREWKTKCFKVTGSVC 54
            L+TG + G+G                          +  L E  R        +     
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D           ++V+      L                 + +    + ++  N      
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAV----ASVLDVNVVGTVR 120

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRI 174
           + Q   P +K  G+G +++  SV G++      +Y A+K A+  L ++LA       + +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180

Query: 175 NSVAPWFITTPLTEPYLSD-------------EKFLEEVKC--RTPMERPGEPKEVSSLV 219
           + +    + T   E  L                +F + +    +   E    P+EV+ + 
Sbjct: 181 SLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVF 240

Query: 220 AFL---CMPAASYITGQTI 235
                   P   Y T +  
Sbjct: 241 LTALRAPKPTLRYFTTERF 259

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  113 bits (283), Expect = 3e-31
 Identities = 38/248 (15%), Positives = 79/248 (31%), Gaps = 27/248 (10%)

Query: 16  QGMTALVTGGTKGLGNEA--ELNE--------CLREWKTKCFKVTGSVCDASSRAEREKL 65
           +    LV GG   LG+                 + E +     V   + D+ +    +  
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVT 60

Query: 66  MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA 125
            +    L + K++ ++   G         + + ++   +   +  ++   S LA   LK 
Sbjct: 61  AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE 120

Query: 126 SGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA--RDNIRINSVAPWFIT 183
            G   + L  +   +  T     Y   KGA++QL ++LA + +         +V P  + 
Sbjct: 121 GGL--LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLD 178

Query: 184 TPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV---DGG 240
           TP+    + +                   + +               +G  I V   DG 
Sbjct: 179 TPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDGK 228

Query: 241 FTVNGFFF 248
             +   +F
Sbjct: 229 TELTPAYF 236

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 2e-27
 Identities = 55/251 (21%), Positives = 91/251 (36%), Gaps = 34/251 (13%)

Query: 14  SLQGMTALVTGGTKGLG-------------------NEAELNECLREW-KTKCFKVTGSV 53
            LQG   +VTG +KG+G                   ++  L + +    +          
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAY 113
                    E+ + Q   L  G L++LI N  TN T+          +   M  NF S  
Sbjct: 71  GTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSYV 128

Query: 114 HLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA--RDN 171
            L+  A P+LK S  G+I++VSS+ G ++  +   Y+A+K A++    ++  E++  R N
Sbjct: 129 VLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187

Query: 172 IRINSVAPWFITTPLTEPYLSDEKFL-----EEVKCRTPMERPGEPKEV----SSLVAFL 222
           + I       I T      +S    +     EE             +EV    S     L
Sbjct: 188 VSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLL 247

Query: 223 CMPAASYITGQ 233
               +  I   
Sbjct: 248 IRNPSRKILEF 258

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  103 bits (257), Expect = 4e-27
 Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 22/252 (8%)

Query: 15  LQGMTALVTG--GTKGLGNE------------------AELNECLREWKTKCFKVTGSVC 54
           L+G   L+ G    K +                       L + +R    +         
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYEL 62

Query: 55  DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYH 114
           D S     + L   V     G L+ ++++V            +    S   +    S Y 
Sbjct: 63  DVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 115 LSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY-AATKGAMNQLAKNLACEWARDNIR 173
           L +L + L      G  +L  S  G              K A+    + LA +  + +IR
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 174 INSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
           +N+++   I T  +         L+  +   P+ +    +EV +   +L    +S ++G+
Sbjct: 182 VNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGE 241

Query: 234 TICVDGGFTVNG 245
              VD G+ V G
Sbjct: 242 VHFVDAGYHVMG 253

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  100 bits (250), Expect = 2e-26
 Identities = 29/234 (12%), Positives = 79/234 (33%), Gaps = 25/234 (10%)

Query: 20  ALVTGGTKGLGNE---------AELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVS 70
            +V GG   LG+            +         +         + +   + + +++Q +
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTA 64

Query: 71  SLF-NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG 129
           S     +++ +    G       + +   ++   ++  +  S+   ++LA   LK  G  
Sbjct: 65  SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGL- 123

Query: 130 NIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWA--RDNIRINSVAPWFITTPLT 187
            + L  +   +  T     Y   K A++ L  +LA + +   DN  + ++ P  + TP+ 
Sbjct: 124 -LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN 182

Query: 188 EPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV-AFLCMPAASYITGQTICVDGG 240
             ++ +                     +S  +  +    ++   +G  + +   
Sbjct: 183 RKWMPNADH----------SSWTPLSFISEHLLKWTTETSSRPSSGALLKITTE 226

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 6e-26
 Identities = 47/281 (16%), Positives = 82/281 (29%), Gaps = 88/281 (31%)

Query: 20  ALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSR 59
           ALVTGG KG+G                    +       +++ + +         D    
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 60  AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLA 119
                L   +   + G L++L+NN G  +                M TNF     +    
Sbjct: 66  QSIRALRDFLRKEY-GGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 120 HPLLKASGAGNIILVSSVCGVLST------------------------------------ 143
            PL+K  G   ++ VSS+  V +                                     
Sbjct: 124 LPLIKPQGR--VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 144 -----NLGTIYAATKGAMNQLAKNLACEWAR----DNIRINSVAPWFITTPLTEPYLSDE 194
                   + Y  TK  +  L++  A + +     D I +N+  P ++ T +  P     
Sbjct: 182 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----- 236

Query: 195 KFLEEVKCRTPMERPGEPKEVSSLVAFLCM--PAASYITGQ 233
                       +    P+E +    +L +  P A    GQ
Sbjct: 237 ------------KATKSPEEGAETPVYLALLPPDAEGPHGQ 265

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 98.4 bits (244), Expect = 2e-25
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 43/211 (20%)

Query: 19  TALVTGGTKGLG---------------------NEAELNECLREWKTKCFKVTGSVCDAS 57
           + +VTG  +G+G                     +  +  E      ++   +       +
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL---PLTVT 61

Query: 58  SRAEREKLMKQVSSLFNGK-LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLS 116
                +  + +V  +     L++LINN G   +     E     ++  +  N  S   L+
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 117 QLAHPLLKASGAGNIILVSSVC------------------GVLSTNLGTIYAATKGAMNQ 158
           Q   PLLK + +       SV                      +      Y  +K A+N 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 159 LAKNLACEWARDNIRINSVAPWFITTPLTEP 189
             + LA +   DN+ + +  P ++ T L   
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK 212

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 62/282 (21%), Positives = 91/282 (32%), Gaps = 63/282 (22%)

Query: 20  ALVTGGTKGLG--------------------NEAELNECLRE------------------ 41
           ALVTG  K LG                    + AE N                       
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 42  WKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY------------- 88
             T            +      +L+    + + G+ ++L+NN  + Y             
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 89  TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAH------PLLKASGAGNIILVSSVCGVLS 142
                 E M    + L  +N  + Y L +         P        +II +        
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC 202
               TIY   KGA+  L ++ A E A   IR+N V P         P        E  + 
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP----PAVWEGHRS 239

Query: 203 RTPME-RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV 243
           + P+  R     EVS +V FLC   A YITG  + VDGG+++
Sbjct: 240 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 91.0 bits (224), Expect = 3e-22
 Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 3/219 (1%)

Query: 29  LGNEAELNECLREWKTKCFKVTGSVC-DASSRAEREKLMKQVSSLFNGKLNILINNVGTN 87
           +     L+      +     V  +     SS    ++  + V   F G ++IL++++   
Sbjct: 72  IKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANG 130

Query: 88  YTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT 147
                 +   +        +    ++         +   G  +I L       +    G 
Sbjct: 131 PEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGG 190

Query: 148 IYAATKGAMNQLAKNLACEWARDN-IRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM 206
             ++ K A+    + LA E  R   IR+N+++   + +   +     +  +E      P+
Sbjct: 191 GMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI 250

Query: 207 ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG 245
           ++     EV +  AFL  P AS ITG TI VD G    G
Sbjct: 251 QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 87.5 bits (215), Expect = 3e-21
 Identities = 46/259 (17%), Positives = 85/259 (32%), Gaps = 55/259 (21%)

Query: 19  TALVTGGTKGLG----------------------NEAELNECLREWKTKCFKVTGSVCDA 56
           + L+TG  +GLG                      N  +  E L +       +     D 
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62

Query: 57  SSRAEREKLMKQVSSLF-NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHL 115
            +    +KL+  +  +  +  LN+L NN G    +       +++L   + TN      L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 116 SQLAHPLLKASGAGNIILVS-----------SVCGVLSTNLG---TIYAATKGAMNQLAK 161
           ++   PLLK +   N                S+ G +  N       Y  +K A+N   K
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 162 NLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF 221
           +L+ +     I   S+ P ++ T +                  P++ P    ++   ++ 
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------SAPLDVPTSTGQIVQTISK 229

Query: 222 LCMPAASYITGQTICVDGG 240
           L         G  +  DG 
Sbjct: 230 L----GEKQNGGFVNYDGT 244

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 82.1 bits (201), Expect = 3e-19
 Identities = 40/260 (15%), Positives = 72/260 (27%), Gaps = 33/260 (12%)

Query: 15  LQGMTALVTG--GTKGLG-------------------NEAELNECLREWKTKCFKVTGSV 53
           L G   LV+G      +                    +   L + + +       +    
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 54  CDASSRAEREKLMKQVSSLFNGKLNILINNVG-TNYTTKPTVEYMAEDLSFLMSTNFESA 112
                           +     KL+ +++++G    T      +     + +      SA
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123

Query: 113 YHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
           Y  + +A  LL     G  I+        +          K A+  + + +A E  +  +
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183

Query: 173 RINSVAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMER-PGEPKEVSSLVAF 221
           R N VA   I T      +            +   E    R P+     +   V+  V  
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243

Query: 222 LCMPAASYITGQTICVDGGF 241
           L        TG  I  DGG 
Sbjct: 244 LLSDWLPATTGDIIYADGGA 263

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 77.6 bits (189), Expect = 2e-17
 Identities = 33/252 (13%), Positives = 73/252 (28%), Gaps = 45/252 (17%)

Query: 38  CLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYM 97
                            +       E +   +   + GK+N+L++++      +  +   
Sbjct: 76  FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNT 134

Query: 98  AEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN 157
           +        +    +          +    +  I L       +    G   ++ K A+ 
Sbjct: 135 SRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALE 194

Query: 158 QLAKNLACEWAR-DNIRINSVAPWFITT-------------------------------- 184
              + LA    R  NIRIN+++   + +                                
Sbjct: 195 SDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIM 254

Query: 185 -----------PLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ 233
                        ++ Y   +  +E  +   P+ +     ++ S+ +FL    +  ITGQ
Sbjct: 255 NNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQ 314

Query: 234 TICVDGGFTVNG 245
           TI VD G  +  
Sbjct: 315 TIYVDNGLNIMF 326

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 22/174 (12%), Positives = 47/174 (27%), Gaps = 23/174 (13%)

Query: 13  WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL 72
            S++G  A+V  GT  +G        L     +       +  A + A+      +V+  
Sbjct: 19  GSVKGKKAVVLAGTGPVG--MRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVT 76

Query: 73  FN------------GKLNILINNVGTNYTTKPTVEYM-AEDLSFLMSTNFESAYHLSQ-L 118
                            + +             +E +         S    + Y+    L
Sbjct: 77  AAETADDASRAEAVKGAHFVFTAGA------IGLELLPQAAWQNESSIEIVADYNAQPPL 130

Query: 119 AHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNI 172
               + A+  G         G L    G      +  + +L ++    +  + I
Sbjct: 131 GIGGIDATDKGKEYGGKRAFGALGIG-GLKLKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 43.1 bits (100), Expect = 1e-05
 Identities = 31/198 (15%), Positives = 55/198 (27%), Gaps = 35/198 (17%)

Query: 11  DRWSLQGMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCF 47
           D W   G T LVTGGT G+G                       +     E + E +    
Sbjct: 4   DEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA 62

Query: 48  KVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMST 107
           + T + C            + V  L  G  + +  +   +         +       +  
Sbjct: 63  RTTVAAC-------DVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIER 115

Query: 108 NFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEW 167
              +    ++  H L +       +L SS            YA     ++ LA+    + 
Sbjct: 116 ASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQ----QR 171

Query: 168 ARDNIRINSVAPWFITTP 185
             D +   +VA       
Sbjct: 172 RSDGLPATAVAWGTWAGS 189

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	251
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.95
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.7
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.64
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.6
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.57
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.55
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.55
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.54
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.53
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.51
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.51
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.51
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.49
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.49
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.48
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.47
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.47
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.46
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.42
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.42
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.32
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.29
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.21
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.12
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.95
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.7
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.49
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.48
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.43
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.53
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.42
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.2
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.1
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.94
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.76
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.68
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	95.67
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.32
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.3
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	95.14
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.31
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.19
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	93.86
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	93.08
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.87
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	92.85
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.7
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	92.7
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	92.36
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	92.21
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	92.17
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.86
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	91.76
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	91.66
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	91.16
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	90.79
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	90.14
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	89.12
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	88.76
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	88.69
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.79
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	87.61
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	87.41
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	87.01
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.99
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	86.96
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	86.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	86.64
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	86.22
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	85.91
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	85.82
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	85.38
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.48
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	84.22
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.21
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.66
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	83.32
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	82.39
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	82.35
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	82.18
d1u11a_	159	N5-CAIR mutase (phosphoribosylaminoimidazole carbo	81.92
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	81.73
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	81.65

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.2e-55  Score=355.93  Aligned_cols=230  Identities=26%  Similarity=0.440  Sum_probs=213.9

Q ss_pred             CCcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276            9 RQDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus         9 ~~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .+..+++++|++|||||++|||                   +.+.++++.+++++.+.++.++.+|++++++++++++++
T Consensus         2 ~n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           2 ENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4567889999999999999999                   678889999999988889999999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.++..+.++...|
T Consensus        82 ~~~~-g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (251)
T d2c07a1          82 LTEH-KNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANY  159 (251)
T ss_dssp             HHHC-SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHhc-CCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHH
Confidence            9999 89999999999876 778889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+.+|+|++|.|++++|||||+|+||+++|+|....  .++..+.+....|++|+++|+|+|+.++||+|+++++
T Consensus       160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999998765  4677888889999999999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 041276          230 ITGQTICVDGGFT  242 (251)
Q Consensus       230 ~~G~~i~vdgG~~  242 (251)
                      +|||+|.||||++
T Consensus       238 itG~~i~vDGG~s  250 (251)
T d2c07a1         238 INGRVFVIDGGLS  250 (251)
T ss_dssp             CCSCEEEESTTSC
T ss_pred             CcCcEEEECCCcC
Confidence            9999999999975

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-55  Score=355.32  Aligned_cols=230  Identities=36%  Similarity=0.573  Sum_probs=213.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++|+||++|||||++|||                   +.+++++..+++.+. +.++.++.+|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999                   667777777777544 678999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~  151 (251)
                      + ++||+||||||... ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+. .+.++...|++
T Consensus        81 ~-g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          81 F-GKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             H-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             c-CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence            9 89999999999876 788999999999999999999999999999999999999999999998764 46778899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|+|.+.....++..+.+.+..|++|+++|+|||+.++||+|++++++|
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~it  238 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCc
Confidence            99999999999999999999999999999999999987777788888888999999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||+|.||||++.+
T Consensus       239 G~~i~vDGG~ta~  251 (251)
T d1vl8a_         239 GQIIFVDGGWTAN  251 (251)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEeCcCeeCc
Confidence            9999999999853

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.5e-56  Score=358.56  Aligned_cols=237  Identities=69%  Similarity=1.108  Sum_probs=187.5

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.++|+||++|||||++|||                   +.++++++.+++...+.++.++.+|++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999                   67888899999988888999999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      +|++++|++|||||... ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||++||.++..+.+....|++
T Consensus        82 ~~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  160 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA  160 (259)
T ss_dssp             HHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred             HhCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccc
Confidence            98568999999999887 77889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|||.+.... ++..+.+..+.|++|+++|+|||++++||+|++++++|
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iT  239 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYIT  239 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCC
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999999877654 34556667789999999999999999999999999999


Q ss_pred             ccEEEeCCCccccccccc
Q 041276          232 GQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       232 G~~i~vdgG~~~~~~~~~  249 (251)
                      ||+|.||||++++++.+.
T Consensus       240 G~~i~vDGG~s~~g~~~~  257 (259)
T d1xq1a_         240 GQTICVDGGLTVNGFSYQ  257 (259)
T ss_dssp             SCEEECCCCEEETTEEEC
T ss_pred             CcEEEeCCCEECCCCCCC
Confidence            999999999999987654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.1e-55  Score=355.07  Aligned_cols=232  Identities=56%  Similarity=0.939  Sum_probs=216.6

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +++|+||++|||||++|||                   +.++++++.+++.+.+.++.++.+|++++++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999                   778888999999988889999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      +++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||+++|.++..+.+....|++|
T Consensus        83 ~~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  161 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  161 (259)
T ss_dssp             TTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHH
Confidence            8448999999999876 778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      |+|+.+|+|++|.|++++|||||+|+||+++|+|.+.....   ++..+.+..+.|++|+++|+|||++++||+|+.+++
T Consensus       162 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  241 (259)
T d2ae2a_         162 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY  241 (259)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999998665554   345566678899999999999999999999999999


Q ss_pred             ccccEEEeCCCcccc
Q 041276          230 ITGQTICVDGGFTVN  244 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~  244 (251)
                      +|||+|.||||++++
T Consensus       242 itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         242 VTGQIIYVDGGLMAN  256 (259)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCcEEEECCCeEee
Confidence            999999999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.6e-55  Score=355.64  Aligned_cols=231  Identities=31%  Similarity=0.451  Sum_probs=216.2

Q ss_pred             CCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +|+||++|||||++|||                    +++.++++.+++++.+.++.++.+|++++++++++++++.+++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            69999999999999999                    3567788889998888899999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCc-eEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       ++||+||||||... ..++.+.+.++|++.+++|+.++++++|.++|+|++++.| +||++||.++..+.+....|++|
T Consensus        84 -G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as  161 (261)
T d1geea_          84 -GKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             -SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             -CCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence             89999999999877 7788999999999999999999999999999999887755 59999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+.+|+|++|.|++++|||||+|+||+++|||......+++..+.+....|++|+++|+|||++++||+|++++++||
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG  241 (261)
T d1geea_         162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             CccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence            99999999999999999999999999999999998776666778888889999999999999999999999999999999


Q ss_pred             cEEEeCCCcccccc
Q 041276          233 QTICVDGGFTVNGF  246 (251)
Q Consensus       233 ~~i~vdgG~~~~~~  246 (251)
                      |+|.||||+++...
T Consensus       242 ~~i~vDGG~sl~p~  255 (261)
T d1geea_         242 ITLFADGGMTLYPS  255 (261)
T ss_dssp             CEEEESTTGGGCGG
T ss_pred             CeEEECCCeeCCCC
Confidence            99999999999643

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.9e-55  Score=351.47  Aligned_cols=230  Identities=31%  Similarity=0.483  Sum_probs=214.6

Q ss_pred             cccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +.++|+||++|||||++|||                   +.++++++.+++++.+.++.++.+|++++++++++++++.+
T Consensus         5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999                   67888999999999888999999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      ++ +++|+||||||... ..++ +.+.++|++.+++|+.++++++|.++|+|++++.|+||++||.++..+.++...|++
T Consensus        85 ~~-g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  161 (255)
T d1fmca_          85 KL-GKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HH-SSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             Hc-CCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchh
Confidence            99 89999999999876 4554 789999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|++.+... .++..+.+.+..|++|+++|+|||++++||+|++++++|
T Consensus       162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~it  240 (255)
T d1fmca_         162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS  240 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            9999999999999999999999999999999999987654 356677788899999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||+|.||||+..+
T Consensus       241 G~~i~vDGG~~~~  253 (255)
T d1fmca_         241 GQILTVSGGGVQE  253 (255)
T ss_dssp             SCEEEESTTSCCC
T ss_pred             CCEEEECcCcccc
Confidence            9999999998643

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.4e-55  Score=350.86  Aligned_cols=223  Identities=30%  Similarity=0.469  Sum_probs=207.5

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +|+||++|||||++|||                   +++.++++.+++..   ++.++.+|++++++++++++++.+++ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~-   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA---NGKGLMLNVTDPASIESVLEKIRAEF-   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CCcEEEEEecCHHHhhhhhhhhhccc-
Confidence            58999999999999999                   56667777766643   57788999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        77 g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  155 (243)
T d1q7ba_          77 GEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKA  155 (243)
T ss_dssp             CSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCcceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHH
Confidence            89999999999887 77889999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |+.+|+|++|.|++++|||||+|+||+++|+|.+..  .++..+.+....|++|+.+|+|+|+.++||+|++++++|||+
T Consensus       156 al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~  233 (243)
T d1q7ba_         156 GLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET  233 (243)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999999998765  345667788899999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      |.||||++|
T Consensus       234 i~vdGG~~~  242 (243)
T d1q7ba_         234 LHVNGGMYM  242 (243)
T ss_dssp             EEESTTSSC
T ss_pred             EEECCCeEe
Confidence            999999876

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=6.7e-55  Score=350.77  Aligned_cols=229  Identities=30%  Similarity=0.394  Sum_probs=192.5

Q ss_pred             CCCCCEEEEecCCCCcC-----------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           14 SLQGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      +|+||++|||||++|||                 +....++..+.+++.+.++.++.+|++|+++++++++++.++| |+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~   80 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GR   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CC
Confidence            58999999999999999                 1011123334455556788999999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAM  156 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~  156 (251)
                      +|+||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.+....|++||+|+
T Consensus        81 iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  159 (247)
T d2ew8a1          81 CDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN  159 (247)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccH
Confidence            999999999976 7889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                      .+|+|++|.|++++|||||+|+||+++|++.+.....+..........|++|+++|+|+|+.++||+|++++|+|||+|.
T Consensus       160 ~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~  239 (247)
T d2ew8a1         160 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLA  239 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            99999999999999999999999999999987654443333333344688999999999999999999999999999999


Q ss_pred             eCCCcccc
Q 041276          237 VDGGFTVN  244 (251)
Q Consensus       237 vdgG~~~~  244 (251)
                      ||||++++
T Consensus       240 vDGG~~~h  247 (247)
T d2ew8a1         240 VDGGMVRH  247 (247)
T ss_dssp             ESSSCCCC
T ss_pred             ECCCEecC
Confidence            99999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.5e-54  Score=348.00  Aligned_cols=222  Identities=28%  Similarity=0.451  Sum_probs=209.8

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ++||||||++|||                    +.+.++++.++++..+.++.++.+|++|+++++++++++.+++ +++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            6999999999999                    5567888888888888899999999999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      |+||||||... ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||++||.++..+.++...|++||+|+.
T Consensus        81 DiLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             Ccccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            99999999887 77899999999999999999999999999999999998999999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc-CCCCCCccccEEE
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC-MPAASYITGQTIC  236 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~i~  236 (251)
                      +|+|+++.|++++|||||+|+||+++|+|.+..  .++..+.+..+.|++|+.+|+|+|+.+.||+ |++++++|||+|.
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~  237 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEE
Confidence            999999999999999999999999999998765  4667788888999999999999999999997 8999999999999


Q ss_pred             eCCCccc
Q 041276          237 VDGGFTV  243 (251)
Q Consensus       237 vdgG~~~  243 (251)
                      ||||+++
T Consensus       238 vdGG~si  244 (244)
T d1edoa_         238 IDGGIAI  244 (244)
T ss_dssp             ESTTTTC
T ss_pred             eCCCeeC
Confidence            9999975

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.3e-54  Score=350.57  Aligned_cols=228  Identities=29%  Similarity=0.429  Sum_probs=200.2

Q ss_pred             CCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      |+||++|||||++|||                    +.+.++++.+++.+. +.++.++.+|++|+++++++++++.++|
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999                    345677777776544 6789999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       |++|+||||||... ..++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||+++|.++..+.++...|++||
T Consensus        82 -G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 -GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             -SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhh
Confidence             89999999999877 7789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----------HHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +|+.+|+|++|.|++++|||||+|+||+++|||.+.....          +...+.+....|++|+++|+|+|+.++|||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~  239 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA  239 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998654321          222334566789999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 041276          224 MPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+.++++|||+|.||||++.+
T Consensus       240 S~~a~~itG~~i~vDGG~tar  260 (260)
T d1x1ta1         240 SDAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             ChhhCCCcCCEEEECcchhcC
Confidence            999999999999999999753

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.9e-54  Score=350.13  Aligned_cols=229  Identities=29%  Similarity=0.430  Sum_probs=210.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +|+||++|||||++|||                   +.+.++++.+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999                   667777777777654  457889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      | |++|+||||||+..+..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.+....|++|
T Consensus        81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 F-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             H-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             h-CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            9 899999999998765678889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (251)
                      |+|+.+|+|+||.|++++|||||+|+||+++|||.+...      ..++..+.+....|++|+++|+|+|+.++||+|++
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999865431      12456677888899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 041276          227 ASYITGQTICVDGGFTV  243 (251)
Q Consensus       227 ~~~~~G~~i~vdgG~~~  243 (251)
                      ++++|||+|.||||++.
T Consensus       240 s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         240 ASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hcCCcCceEEcCcchhc
Confidence            99999999999999975

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.5e-54  Score=345.09  Aligned_cols=223  Identities=28%  Similarity=0.453  Sum_probs=199.9

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE-------------EEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT-------------GSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~-------------~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      .++|+||++|||||++|||     .++++.+.+.|.++.             .+.+|++|+++++++++++.+++ +++|
T Consensus         2 ~psl~gK~~lITGas~GIG-----~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   75 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIG-----LAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQ-GPVE   75 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred             CCCCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhc-CCce
Confidence            3579999999999999999     899999988876554             56899999999999999999999 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQ  158 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~  158 (251)
                      +||||||... ..++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||.++..+.++...|++||+|+.+
T Consensus        76 iLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  154 (237)
T d1uzma1          76 VLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIG  154 (237)
T ss_dssp             EEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHH
T ss_pred             EEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHH
Confidence            9999999876 778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeC
Q 041276          159 LAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVD  238 (251)
Q Consensus       159 ~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vd  238 (251)
                      |+|+++.|++++|||||+|+||+++|+|.+..  .+...+......|++|+.+|||+|+++.||+|++++++|||+|.||
T Consensus       155 lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vd  232 (237)
T d1uzma1         155 MARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVD  232 (237)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEEC
Confidence            99999999999999999999999999998765  4666777888999999999999999999999999999999999999


Q ss_pred             CCccc
Q 041276          239 GGFTV  243 (251)
Q Consensus       239 gG~~~  243 (251)
                      ||+.|
T Consensus       233 GG~~m  237 (237)
T d1uzma1         233 GGMGM  237 (237)
T ss_dssp             TTTTC
T ss_pred             CCCCC
Confidence            99875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.1e-54  Score=349.17  Aligned_cols=225  Identities=30%  Similarity=0.481  Sum_probs=210.1

Q ss_pred             CCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCC
Q 041276           16 QGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGK   76 (251)
Q Consensus        16 ~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   76 (251)
                      .||++|||||++|||                   +++.++++.+++++.+.++.++.+|++|+++++++++++.++| ++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~   79 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP   79 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            489999999999999                   7788899999999888899999999999999999999999999 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH--HHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           77 LNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPL--LKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      ||+||||||... ..++.+.+.++|++.+++|+.++++++|+++|+  |++++.|+||+++|..+..+.+....|++||+
T Consensus        80 iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKa  158 (257)
T d2rhca1          80 VDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  158 (257)
T ss_dssp             CSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHH
Confidence            999999999876 788899999999999999999999999999997  56677799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---------CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      |+.+|+|+||.|++++|||||+|+||+++|||.+..         ...++..+.+..+.|++|+++|+|+|+.++||+|+
T Consensus       159 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~  238 (257)
T d2rhca1         159 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP  238 (257)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999987543         23466778888899999999999999999999999


Q ss_pred             CCCCccccEEEeCCCcc
Q 041276          226 AASYITGQTICVDGGFT  242 (251)
Q Consensus       226 ~~~~~~G~~i~vdgG~~  242 (251)
                      +++++|||+|.||||++
T Consensus       239 ~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         239 GAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             GGTTCCSCEEEESTTCC
T ss_pred             hhcCCcCceEEECcCcc
Confidence            99999999999999975

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=8.4e-54  Score=346.96  Aligned_cols=226  Identities=26%  Similarity=0.421  Sum_probs=210.7

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .|+||++|||||++|||                   +.+.++++.+++.+.+.++.++.+|++++++++++++++.++| 
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            58999999999999999                   6788889999999888899999999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||...+..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.++..+.+....|++||+
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            89999999999876567899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCC--------------CCCCHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP--------------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      |+.+|+|++|.|++++|||||+|+||+++|+|...              ....+...+.+....|++|+++|+|+|++++
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  240 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999997421              1122556677788999999999999999999


Q ss_pred             HHcCCCCCCccccEEEeCCC
Q 041276          221 FLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG  240 (251)
                      ||+|+.++++|||+|.||||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            99999999999999999998

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.9e-53  Score=344.18  Aligned_cols=227  Identities=26%  Similarity=0.381  Sum_probs=205.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.|+||++|||||++|||                   +.++++++.+++   +.++.++.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            458999999999999999                   556666666655   4578899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       ++||+||||||... ..++.+.+.++|++.+++|+.+++++++.++|+|.++ +.|+||++||.++..+.+....|++|
T Consensus        78 -g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  155 (256)
T d1k2wa_          78 -GSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT  155 (256)
T ss_dssp             -SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             -CCccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhh
Confidence             89999999999876 7789999999999999999999999999999986654 56999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---------CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      |+|+.+|+|++|.|++++|||||+|+||+++|++.+..         ...++..+.+....|++|+++|+|||+.++||+
T Consensus       156 Kaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~  235 (256)
T d1k2wa_         156 KAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA  235 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986432         223455667778899999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccc
Q 041276          224 MPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      |++++++|||+|.||||++|+
T Consensus       236 S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         236 TPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSSCC
T ss_pred             CchhCCccCceEEECcchhhC
Confidence            999999999999999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-53  Score=343.73  Aligned_cols=224  Identities=29%  Similarity=0.441  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee------------------EEEeccCCCHHHHHHHHHHHHHhcCC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV------------------TGSVCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~------------------~~~~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .|+||++|||||++|||     .++++.+.+.|.++                  .++++|++|+++++++++++.+++ |
T Consensus         2 ~l~GK~alITGas~GIG-----~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIG-----RAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL-G   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             ccCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhc-C
Confidence            47899999999999999     55555555554333                  456899999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           76 KLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +||+||||||... ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|.++..+.+....|++||+|
T Consensus        76 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          76 RVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             CCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            9999999999876 778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +.+|+|++|.|++++|||||+|+||+++||+.....    ..++..+.+....|++|+++|+|+|+.++||+|++++++|
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it  234 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  234 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            999999999999999999999999999999864322    2234556677889999999999999999999999999999


Q ss_pred             ccEEEeCCCcccc
Q 041276          232 GQTICVDGGFTVN  244 (251)
Q Consensus       232 G~~i~vdgG~~~~  244 (251)
                      ||+|.||||++.+
T Consensus       235 G~~i~vDGG~tas  247 (248)
T d2d1ya1         235 GAILPVDGGMTAS  247 (248)
T ss_dssp             SCEEEESTTGGGB
T ss_pred             CcEEEcCcCcccc
Confidence            9999999999753

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-52  Score=336.26  Aligned_cols=222  Identities=28%  Similarity=0.410  Sum_probs=199.6

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------eeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------KVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++|+||++|||||++|||     .++++.+.+.|.                   ...++.+|++++++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG-----~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIG-----RATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            468999999999999999     333333333322                   35577899999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++.+.++++||. +..+.++...|++||
T Consensus        76 -g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asK  152 (242)
T d1ulsa_          76 -GRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASM  152 (242)
T ss_dssp             -SSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHH
T ss_pred             -CCceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHH
Confidence             89999999999876 788899999999999999999999999999999999887888887774 567888999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|.+..  .++..+......|++|+.+|+|+|+.++||+|++++++|||
T Consensus       153 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~  230 (242)
T d1ulsa_         153 AGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQ  230 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence            9999999999999999999999999999999998765  46677888889999999999999999999999999999999


Q ss_pred             EEEeCCCcccc
Q 041276          234 TICVDGGFTVN  244 (251)
Q Consensus       234 ~i~vdgG~~~~  244 (251)
                      +|.||||+++.
T Consensus       231 ~i~vDGG~t~g  241 (242)
T d1ulsa_         231 VLFVDGGRTIG  241 (242)
T ss_dssp             EEEESTTTTTT
T ss_pred             EEEECCCccCC
Confidence            99999999975

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.6e-53  Score=338.75  Aligned_cols=219  Identities=31%  Similarity=0.425  Sum_probs=200.9

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .|+||++|||||++|||                   +.++++++.+++.   .++.++.+|++|+++++++++++.+++ 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF-   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence            68999999999999999                   4555556655553   367889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||++||.++..+.+....|+++|+
T Consensus        79 g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  157 (244)
T d1nffa_          79 GGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  157 (244)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence            89999999999876 77889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |+.+|+|++|.|++++|||||+|+||+++|||.......       ..+.|++|+.+|+|+|++++||++++++++|||+
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~  230 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAE  230 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCCE
Confidence            999999999999999999999999999999998665332       3468999999999999999999999999999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      |.||||++..
T Consensus       231 i~vDGG~~ag  240 (244)
T d1nffa_         231 FVVDGGTVAG  240 (244)
T ss_dssp             EEESTTGGGS
T ss_pred             EEECCCeecc
Confidence            9999999764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.5e-52  Score=339.00  Aligned_cols=234  Identities=57%  Similarity=0.958  Sum_probs=213.2

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .++|+||+||||||++|||                   +++.++++.+++++.+..++++.+|++++++++++++++.++
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3689999999999999999                   678888999999999989999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      +++++|+|+||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.+....|+++
T Consensus        81 ~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  159 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  159 (258)
T ss_dssp             TTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHH
Confidence            8568999999999987 778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC----CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS----DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+|+.+|+|.+|+|++++|||||+|+||+++|||.+....    .++..+.+..+.|++|+++|+|||++++||+|++++
T Consensus       160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~  239 (258)
T d1ae1a_         160 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAAS  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            9999999999999999999999999999999999866543    356778888889999999999999999999999999


Q ss_pred             CccccEEEeCCCcccccc
Q 041276          229 YITGQTICVDGGFTVNGF  246 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~~~  246 (251)
                      ++|||.|.||||++.++=
T Consensus       240 ~itG~~i~vDGG~s~~g~  257 (258)
T d1ae1a_         240 YITGQIIWADGGFTANGG  257 (258)
T ss_dssp             TCCSCEEEESTTGGGCSC
T ss_pred             CCcCcEEEeCCCeeccCC
Confidence            999999999999998764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5e-53  Score=340.59  Aligned_cols=226  Identities=27%  Similarity=0.445  Sum_probs=206.3

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .|+||++|||||++|||                   +.+.++++.+++.. +.++.++.+|++|+++++++++++.++| 
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            58999999999999999                   56777777777754 4578999999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCc-eEEEecccccccCCCCChhhHHhH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAG-NIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                      |+||+||||||... ..++.+.+.++|++.+++|+.+++++++.++|+|++++.| +||++||.++..+.+....|++||
T Consensus        81 G~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asK  159 (251)
T d1zk4a1          81 GPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHH
Confidence            89999999999987 7789999999999999999999999999999999988754 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHH--HccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          154 GAMNQLAKNLACE--WARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       154 ~a~~~~~~~la~e--~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      +|+.+|+|++|+|  ++++|||||+|+||+++|+|.+.... ++.......+.|++|+++|+|+|+.++||+|++++++|
T Consensus       160 aal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it  238 (251)
T d1zk4a1         160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence            9999999999998  56899999999999999999877644 34445556778999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 041276          232 GQTICVDGGFTV  243 (251)
Q Consensus       232 G~~i~vdgG~~~  243 (251)
                      ||+|.||||++.
T Consensus       239 G~~i~vDGG~ta  250 (251)
T d1zk4a1         239 GSEFVVDGGYTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECccccc
Confidence            999999999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=4.8e-53  Score=341.68  Aligned_cols=225  Identities=26%  Similarity=0.359  Sum_probs=207.8

Q ss_pred             CEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      |++|||||++|||                   ++++++++.+++.+.+.++.++.+|++++++++++++++.++| |++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            8899999999999                   7788899999999888899999999999999999999999999 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccCCCCChhhHHhHHHHH
Q 041276           79 ILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLSTNLGTIYAATKGAMN  157 (251)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~  157 (251)
                      +||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++ .++|+++||.++..+.+....|++||+|+.
T Consensus        81 ilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (255)
T d1gega_          81 VIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  159 (255)
T ss_dssp             EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence            9999999876 78899999999999999999999999999999987664 578999999999999999999999999999


Q ss_pred             HHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---------CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          158 QLAKNLACEWARDNIRINSVAPWFITTPLTEPY---------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       158 ~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      +|+|++|.|++++|||||+|+||+++|||....         ...+.....+.++.|++|+++|+|+|+.++||+|++++
T Consensus       160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~  239 (255)
T d1gega_         160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  239 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999999999999999999999999999986432         12234556677889999999999999999999999999


Q ss_pred             CccccEEEeCCCcccc
Q 041276          229 YITGQTICVDGGFTVN  244 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~~  244 (251)
                      ++|||+|.||||+.++
T Consensus       240 ~itG~~i~vDGG~~~n  255 (255)
T d1gega_         240 YMTGQSLLIDGGMVFN  255 (255)
T ss_dssp             TCCSCEEEESSSSSCC
T ss_pred             CccCcEEEecCCEEeC
Confidence            9999999999999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-53  Score=340.54  Aligned_cols=224  Identities=30%  Similarity=0.461  Sum_probs=198.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      .+|+||++|||||++|||                   +++.++++.++    ...+.++.+|++|+++++++++++.++|
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE----LPGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----cCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            368999999999999999                   33444433333    3457888999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|+||||||......++.+.+.++|++.+++|+.+++.++|.++|+|++++ |+||++||.++..+.+....|+++|
T Consensus        78 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asK  155 (250)
T d1ydea1          78 -GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATK  155 (250)
T ss_dssp             -SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             -CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHH
Confidence             89999999999876566788999999999999999999999999999998765 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      +|+.+|+|++|.|++++|||||+|+||+++|||.+...    ..+...+......|++|+++|+|+|++++||+|+ +++
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~  234 (250)
T d1ydea1         156 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANF  234 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTT
T ss_pred             hhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCC
Confidence            99999999999999999999999999999999865432    2234556666788999999999999999999996 889


Q ss_pred             ccccEEEeCCCccc
Q 041276          230 ITGQTICVDGGFTV  243 (251)
Q Consensus       230 ~~G~~i~vdgG~~~  243 (251)
                      +|||+|.||||+++
T Consensus       235 itG~~i~vDGG~~l  248 (250)
T d1ydea1         235 CTGIELLVTGGAEL  248 (250)
T ss_dssp             CCSCEEEESTTTTS
T ss_pred             CcCCeEEECCCccc
Confidence            99999999999987

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.1e-53  Score=342.65  Aligned_cols=227  Identities=30%  Similarity=0.394  Sum_probs=202.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +|+||++|||||++|||                   +.++++++.+++   +.++.++.+|++++++++++++++.+++ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence            68999999999999999                   344444444443   4568899999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||++||.++..+.++...|++||+
T Consensus        78 g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  156 (254)
T d1hdca_          78 GSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             SCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHH
Confidence            89999999999876 78899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCC-CHHHHHHHHHHHcCCCCCCcccc
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPG-EPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      |+.+|+|+||.|++++|||||+|+||+++|+|.......  ..+....+.|++|++ .|+|||++++||+|++++++|||
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~  234 (254)
T d1hdca_         157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA  234 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH--HHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence            999999999999999999999999999999987544222  223344678999997 69999999999999999999999


Q ss_pred             EEEeCCCcccccccc
Q 041276          234 TICVDGGFTVNGFFF  248 (251)
Q Consensus       234 ~i~vdgG~~~~~~~~  248 (251)
                      .|.||||++.. +++
T Consensus       235 ~i~vDGG~t~g-p~~  248 (254)
T d1hdca_         235 ELAVDGGWTTG-PTV  248 (254)
T ss_dssp             EEEESTTTTTS-CCH
T ss_pred             eEEeCCCccCC-CCc
Confidence            99999999874 443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.6e-51  Score=333.10  Aligned_cols=231  Identities=25%  Similarity=0.393  Sum_probs=203.7

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +|+||+||||||++|||                   +.++++++.+++...+ .+.++.+|++|+++++++++++.+++ 
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH-   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            68999999999999999                   6677788888876544 57788999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC-hhhHHh
Q 041276           75 GKLNILINNVGTNYTT-KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG-TIYAAT  152 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~Y~~s  152 (251)
                      +++|++|||||..... ..+.+.+.++|++++++|+.++++++|.++|+|++++.|+||+++|.++..+.++. ..|++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            8999999999987533 35778999999999999999999999999999999999999999999998876654 589999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-HHHHHHH--hhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-EKFLEEV--KCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      |+|+.+|+|++|.|++++|||||+|+||+++|||....... ++..+..  ....|.+|+.+|+|||++++||+|+++++
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence            99999999999999999999999999999999998876543 3322222  23457889999999999999999999999


Q ss_pred             ccccEEEeCCCcccccc
Q 041276          230 ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~  246 (251)
                      +|||+|.||||++...+
T Consensus       241 itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         241 VSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             CCSCEEEESTTGGGCCT
T ss_pred             ccCceEEECcCcccCCC
Confidence            99999999999987654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.1e-52  Score=333.32  Aligned_cols=221  Identities=28%  Similarity=0.409  Sum_probs=198.5

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++|+||++|||||++|||                   +.+.++++.+++    ..+.++.+|++|+++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hc
Confidence            478999999999999999                   333443433333    346678999999999887764    56


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.++|.++|+|.++ ..|+||+++|.++..+.+....|+++
T Consensus        73 -g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as  150 (242)
T d1cyda_          73 -GPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  150 (242)
T ss_dssp             -CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             -CCCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccch
Confidence             89999999999876 7789999999999999999999999999999987654 56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+.+|+|++|.|++++|||||+|+||+++|+|.+.....++..+.+....|++|+.+|+|+|+.++||+|++++++||
T Consensus       151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG  230 (242)
T d1cyda_         151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG  230 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCC
Confidence            99999999999999999999999999999999998888778888888899999999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 041276          233 QTICVDGGFTV  243 (251)
Q Consensus       233 ~~i~vdgG~~~  243 (251)
                      |+|.||||++-
T Consensus       231 ~~i~vDGG~~a  241 (242)
T d1cyda_         231 GGILVDAGYLA  241 (242)
T ss_dssp             SEEEESTTGGG
T ss_pred             ceEEeCcchhc
Confidence            99999999874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.3e-51  Score=332.66  Aligned_cols=222  Identities=23%  Similarity=0.305  Sum_probs=203.2

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE------------------EeccCCCHHHHHHHHHHHHHhcCCCccEE
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTG------------------SVCDASSRAEREKLMKQVSSLFNGKLNIL   80 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~------------------~~~D~~~~~~~~~~~~~i~~~~~~~id~l   80 (251)
                      ++|||||++|||     .+++..|.+.|.++..                  ..+|+++.++++++++++.++| |+||+|
T Consensus         2 TAlVTGas~GiG-----~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGG-----MGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTH-----HHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEE
T ss_pred             EEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            799999999999     6667777776665543                  2689999999999999999999 899999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHH
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA  160 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  160 (251)
                      |||||...+..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.+....|++||+|+.+|+
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt  155 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLA  155 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHH
Confidence            99999876567899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHccCCeEEEEEecCcccCCCCCCCC------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          161 KNLACEWARDNIRINSVAPWFITTPLTEPYL------SDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       161 ~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |++|.|++++|||||+|+||+++|++.....      ..++..+.+.+..|++|+++|+|||++++||+|++++|+|||+
T Consensus       156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~  235 (252)
T d1zmta1         156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQV  235 (252)
T ss_dssp             HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCE
T ss_pred             HHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            9999999999999999999999999987654      2456777888899999999999999999999999999999999


Q ss_pred             EEeCCCcccccc
Q 041276          235 ICVDGGFTVNGF  246 (251)
Q Consensus       235 i~vdgG~~~~~~  246 (251)
                      |.||||++|-.-
T Consensus       236 i~vdGG~~~~~~  247 (252)
T d1zmta1         236 FWLAGGFPMIER  247 (252)
T ss_dssp             EEESTTCCCCCC
T ss_pred             EEECCCceeCCC
Confidence            999999998653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-51  Score=336.23  Aligned_cols=235  Identities=24%  Similarity=0.376  Sum_probs=202.7

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC---FKVTGSVCDASSRAEREKLMKQVS   70 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~   70 (251)
                      |+|+||++|||||++|||                   +.++++++.+++.+.+   .++.++.+|++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999                   6778888888887763   468999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCCh
Q 041276           71 SLFNGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGT  147 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  147 (251)
                      ++| +++|++|||||...+.   ....+.+.+.|++.+++|+.+++.++++++|+|++++++.|+++||.++..+.++..
T Consensus        81 ~~~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~  159 (272)
T d1xkqa_          81 KQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL  159 (272)
T ss_dssp             HHH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSH
T ss_pred             HHh-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcc
Confidence            999 8999999999987632   223467888999999999999999999999999987645455555567889999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH-------HHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK-------FLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|+|.......++       ........+|++|+++|+|||++++
T Consensus       160 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~  239 (272)
T d1xkqa_         160 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999999876654432       2334456789999999999999999


Q ss_pred             HHcCCC-CCCccccEEEeCCCcccc-cccc
Q 041276          221 FLCMPA-ASYITGQTICVDGGFTVN-GFFF  248 (251)
Q Consensus       221 ~l~~~~-~~~~~G~~i~vdgG~~~~-~~~~  248 (251)
                      ||+|++ +.|+|||+|.||||+++. +++.
T Consensus       240 fL~S~~as~~iTG~~i~vDGG~~l~~g~~~  269 (272)
T d1xkqa_         240 FLADRNLSFYILGQSIVADGGTSLVMGTQA  269 (272)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGCBGGGG
T ss_pred             HHhCcchhCCccCeEEEeCcCHHHhcCCCc
Confidence            999976 579999999999999985 4443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.2e-51  Score=332.65  Aligned_cols=228  Identities=27%  Similarity=0.445  Sum_probs=191.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC---FKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +|+||++|||||++|||                   +.++++++.+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999                   6778888888887764   3589999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccc-ccccCCCCCh
Q 041276           72 LFNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSV-CGVLSTNLGT  147 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~-~~~~~~~~~~  147 (251)
                      +| +++|+||||||...+   ..++.+.+.++|++.+++|+.+++.++++++|+|++++ |.+|+++|. ++..+.+...
T Consensus        82 ~~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          82 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             Hh-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence            99 899999999998642   23456779999999999999999999999999998876 556665555 5678899999


Q ss_pred             hhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-------HHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          148 IYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-------EKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      .|++||+|+.+|+|+||.|++++|||||+|+||+++|+|.+.....       .+....+....|++|+++|+|||+.++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  239 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999998654322       234455667899999999999999999


Q ss_pred             HHcCCC-CCCccccEEEeCCCccc
Q 041276          221 FLCMPA-ASYITGQTICVDGGFTV  243 (251)
Q Consensus       221 ~l~~~~-~~~~~G~~i~vdgG~~~  243 (251)
                      ||+|++ ++|+|||.|.||||+++
T Consensus       240 fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         240 FLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhCCcccCCccCceEEeCCChhh
Confidence            999954 89999999999999986

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-51  Score=337.93  Aligned_cols=233  Identities=31%  Similarity=0.468  Sum_probs=210.0

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-----CCeeEEEeccCCCHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-----CFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .|+||+||||||++|||                   +.++++++.+++.+.     +.++.++.+|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            58999999999999999                   667788888888643     568999999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      .+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++|+ ++..+.+....|
T Consensus        89 ~~~~-G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          89 LDTF-GKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHh-CCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            9999 89999999999876 77899999999999999999999999999999999998899999866 455678889999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC--CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS--DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (251)
                      +++|+|+.+|+|++|.|++++|||||+|+||+++|++......  .++..+....+.|++|+++|+|||+.++||+|+.+
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s  245 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999998765433  24556666778999999999999999999999999


Q ss_pred             CCccccEEEeCCCccccccccc
Q 041276          228 SYITGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       228 ~~~~G~~i~vdgG~~~~~~~~~  249 (251)
                      +++|||+|.||||+++....|+
T Consensus       246 ~~iTG~~i~VDGG~sl~~~~~~  267 (297)
T d1yxma1         246 SFITGQSVDVDGGRSLYTHSYE  267 (297)
T ss_dssp             TTCCSCEEEESTTGGGCBTTCC
T ss_pred             cCcCCcEEEeCcChhhhcCCCC
Confidence            9999999999999999765543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-51  Score=330.09  Aligned_cols=220  Identities=28%  Similarity=0.418  Sum_probs=197.8

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.|+||++|||||++|||                   +.+.++++.+++    ..+.++.+|++|+++++++++    ++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~----~~   74 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hh
Confidence            358999999999999999                   334444443333    246678899999999887764    56


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hCCCceEEEecccccccCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLK-ASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|+|. +++.|+||+++|.++..+.+....|++|
T Consensus        75 -g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  152 (244)
T d1pr9a_          75 -GPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             -CCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             -CCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence             89999999999977 77899999999999999999999999999999765 4567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                      |+|+.+|+|++|.|++++|||||+|+||+++|++.+....+++..+.+..+.|++|+.+|+|||+.++||+|+.++++||
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG  232 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCC
Confidence            99999999999999999999999999999999999888788888888889999999999999999999999999999999


Q ss_pred             cEEEeCCCcc
Q 041276          233 QTICVDGGFT  242 (251)
Q Consensus       233 ~~i~vdgG~~  242 (251)
                      |+|.||||++
T Consensus       233 ~~i~vDGG~~  242 (244)
T d1pr9a_         233 STLPVEGGFW  242 (244)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECccHh
Confidence            9999999997

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.6e-51  Score=333.86  Aligned_cols=230  Identities=26%  Similarity=0.417  Sum_probs=204.7

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC---FKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +|+||++|||||++|||                   +.++++++.+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47899999999999999                   6678888888888764   3688999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           72 LFNGKLNILINNVGTNYTT-KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +| |++|++|||||..... ....+.+.++|++.+++|+.+++.++|+++|+|++++.|+|+++||.++..+.++...|+
T Consensus        81 ~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          81 KF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred             Hc-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence            99 8999999999976422 345567899999999999999999999999999999889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH-------HHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK-------FLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      +||+|+.+|+|++|.|++++|||||+|+||+++||+.......+.       ........+|++|+++|+|||+.++||+
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~  239 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999998766543322       2233345689999999999999999999


Q ss_pred             CC-CCCCccccEEEeCCCcccc
Q 041276          224 MP-AASYITGQTICVDGGFTVN  244 (251)
Q Consensus       224 ~~-~~~~~~G~~i~vdgG~~~~  244 (251)
                      |+ .++|+|||.|.||||+++.
T Consensus       240 S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         240 DRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             CHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCccccCccCcEEEeCcCHHHh
Confidence            95 6899999999999999865

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=9.7e-52  Score=333.25  Aligned_cols=226  Identities=31%  Similarity=0.359  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .|+||++|||||++|||                   ++++++++.+++   +.+..++.+|++++++++++++++.+++ 
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-
Confidence            58999999999999999                   556666666655   4467889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|+|++++ |+||++||.++..+.+....|++||+
T Consensus        79 g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKa  156 (253)
T d1hxha_          79 GTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             CSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhH
Confidence            89999999999876 67889999999999999999999999999999998654 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcc--CCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          155 AMNQLAKNLACEWAR--DNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       155 a~~~~~~~la~e~~~--~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      |+.+|+|++|.|+++  +|||||+|+||+++|++.+...+.   ++.........|.+|+.+|+|+|++++||+|+++++
T Consensus       157 al~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  236 (253)
T d1hxha_         157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV  236 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCC
Confidence            999999999999987  569999999999999987554332   333333444567889999999999999999999999


Q ss_pred             ccccEEEeCCCccccc
Q 041276          230 ITGQTICVDGGFTVNG  245 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~  245 (251)
                      +|||.|.||||+.--+
T Consensus       237 itG~~i~VDGG~~~~g  252 (253)
T d1hxha_         237 MSGSELHADNSILGMG  252 (253)
T ss_dssp             CCSCEEEESSSCTTTT
T ss_pred             CcCcEEEECccHhhCc
Confidence            9999999999987543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.5e-50  Score=327.97  Aligned_cols=228  Identities=28%  Similarity=0.460  Sum_probs=202.8

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .++++||+||||||++|||                   +.+.++++.+++.+ .+.++.++.+|++++++++++++++.+
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3579999999999999999                   44455566655543 467899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEeccccccc-------CC
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVL-------ST  143 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~-------~~  143 (251)
                      ++ +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|.++ ..+.|++++|.....       +.
T Consensus        84 ~~-g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          84 DL-GPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HS-CSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             Hh-CCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            99 89999999999876 7889999999999999999999999999999998644 567888877766554       33


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ++...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....  .++..+.....+|++|+++|+|||+.++||+
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~  239 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLL  239 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999999999998765  4677788889999999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 041276          224 MPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       224 ~~~~~~~~G~~i~vdgG~~~  243 (251)
                      |++++++|||+|.||||+++
T Consensus       240 S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         240 SDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             SGGGTTCCSCEEEECTTGGG
T ss_pred             cchhCCCcCceEEECCCeec
Confidence            99999999999999999976

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.2e-50  Score=327.83  Aligned_cols=230  Identities=30%  Similarity=0.403  Sum_probs=199.2

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      |+|+||+||||||++|||                   +.++++++.+++   +.++.++.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            468999999999999999                   455555555544   4578899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCC----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           74 NGKLNILINNVGTNYTTKP----TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                       +++|++|||||+......    ..+.+++.|++.+++|+.+++.++|.++|+|++++ |+||+++|.++..+.+....|
T Consensus        78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y  155 (276)
T d1bdba_          78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY  155 (276)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred             -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence             899999999998653332    23455678999999999999999999999998875 899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CCHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SDEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      ++||+|+.+|+|++|.|++++ ||||+|+||+++|+|..+..        ..++..+.+....|++|+++|+|+|+.++|
T Consensus       156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999975 99999999999999875432        234566777888999999999999999999


Q ss_pred             HcCC-CCCCccccEEEeCCCcccccccc
Q 041276          222 LCMP-AASYITGQTICVDGGFTVNGFFF  248 (251)
Q Consensus       222 l~~~-~~~~~~G~~i~vdgG~~~~~~~~  248 (251)
                      |+|+ +++++|||+|.||||+++++++-
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~~g~~~  262 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGVRGFFS  262 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGGCCSSC
T ss_pred             HcCCcccCCeeCcEEEECcChhhcceeC
Confidence            9984 69999999999999999988753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-50  Score=326.35  Aligned_cols=230  Identities=23%  Similarity=0.297  Sum_probs=196.1

Q ss_pred             cCCCCCEEEEecCCC--CcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTK--GLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~--giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+|+||++|||||+|  |||                  +.+++.+..+++...+....++.+|++++++++++++++.++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            478999999999987  899                  222233333444444556778899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           73 FNGKLNILINNVGTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                      + +++|++|||||....   ..++.+.+.++|+..+++|+.+++.+++.+.|+|+++  |+||++||..+..+.+....|
T Consensus        84 ~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~~~~~Y  160 (256)
T d1ulua_          84 F-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVM  160 (256)
T ss_dssp             H-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCTTCHHH
T ss_pred             c-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCCCchHH
Confidence            9 899999999998642   3356788999999999999999999999999999764  899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+.+|+|++|.|++++|||||+|+||+++|++.......++..+.+.+..|++|+.+|+|||++++||+|+++++
T Consensus       161 ~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  240 (256)
T d1ulua_         161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG  240 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999999887777888888889999999999999999999999999999


Q ss_pred             ccccEEEeCCCccccc
Q 041276          230 ITGQTICVDGGFTVNG  245 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~  245 (251)
                      +|||+|.||||+++.+
T Consensus       241 itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         241 ITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             CCSCEEEESTTGGGBC
T ss_pred             ccCCeEEECcCEeCcC
Confidence            9999999999998864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.2e-49  Score=322.51  Aligned_cols=225  Identities=25%  Similarity=0.385  Sum_probs=203.0

Q ss_pred             cCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+|+||+||||||++|||                    +.+.++++.+++.+.+.+++++.+|++|+++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999                    556677888888888889999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~Y~~  151 (251)
                      + ++||++|||||... ..++.+.+.++|++.+++|+.+++++++.++|+|+++  +++++++|..+.. +.+.+..|++
T Consensus        82 ~-g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~a  157 (259)
T d1ja9a_          82 F-GGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAG  157 (259)
T ss_dssp             H-SCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             c-CCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHH
Confidence            9 89999999999876 7788899999999999999999999999999999765  6777777665544 6889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCC-----------CCCCHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEP-----------YLSDEKFLEEVKCRTPMERPGEPKEVSSLVA  220 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (251)
                      +|+|+.+|+|+||+|++++|||||+|+||+++|+|.+.           ....++..+.+....|++|+++|+|||++++
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~  237 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999987421           1223566777788999999999999999999


Q ss_pred             HHcCCCCCCccccEEEeCCCc
Q 041276          221 FLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      ||+|++++++|||.|.||||.
T Consensus       238 fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         238 ALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhcCCcCceEEeCCCC
Confidence            999999999999999999996

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.2e-49  Score=316.26  Aligned_cols=215  Identities=28%  Similarity=0.395  Sum_probs=194.7

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE---------------EEeccCCCHHHHHHHHHHHHHhcCCCccE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT---------------GSVCDASSRAEREKLMKQVSSLFNGKLNI   79 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~---------------~~~~D~~~~~~~~~~~~~i~~~~~~~id~   79 (251)
                      |+||+||||||++|||     .++++.+.+.|.++.               ++.+|+++.      ++.+.+++ +++|+
T Consensus         2 LkgK~~lVTGas~GIG-----~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~------~~~~~~~~-g~iD~   69 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIG-----RAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD------LDLLFEKV-KEVDI   69 (234)
T ss_dssp             CTTCEEEEESCSSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTC------HHHHHHHS-CCCSE
T ss_pred             CCCCEEEEeCCCcHHH-----HHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHH------HHHHHHHh-CCCcE
Confidence            6899999999999999     888888888776654               346787753      45566677 89999


Q ss_pred             EEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHH
Q 041276           80 LINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQL  159 (251)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~  159 (251)
                      ||||||... ..++.+.+.++|++.+++|+.+++.++|.++|+|++++.|+||+++|..+..+.+....|+++|+|+.+|
T Consensus        70 lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~l  148 (234)
T d1o5ia_          70 LVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF  148 (234)
T ss_dssp             EEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence            999999876 7788899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCC
Q 041276          160 AKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       160 ~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      +|++|.|++++|||||+|+||+++|++.+.... ++..+.+..+.|++|+.+|+|+|+.++||+|++++++|||+|.|||
T Consensus       149 tk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  227 (234)
T d1o5ia_         149 LKTLSFEVAPYGITVNCVAPGWTETERVKELLS-EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG  227 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhcccCeEEeecccCccchhhhhhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECc
Confidence            999999999999999999999999999876543 4566778889999999999999999999999999999999999999


Q ss_pred             Cccc
Q 041276          240 GFTV  243 (251)
Q Consensus       240 G~~~  243 (251)
                      |++.
T Consensus       228 G~s~  231 (234)
T d1o5ia_         228 GLSK  231 (234)
T ss_dssp             TCCC
T ss_pred             cccc
Confidence            9975

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.8e-48  Score=317.80  Aligned_cols=230  Identities=25%  Similarity=0.401  Sum_probs=203.4

Q ss_pred             CcccCCCCCEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      +...+|+||+||||||++|||                    +.+.++++.+++++.+.++.++.+|++++++++++++++
T Consensus        11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence            346679999999999999999                    456777888888888889999999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-CCCCChh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTI  148 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~  148 (251)
                      .+.+ +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|+++  |++++++|..+.. +.+....
T Consensus        91 ~~~~-g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~  166 (272)
T d1g0oa_          91 VKIF-GKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAV  166 (272)
T ss_dssp             HHHH-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHh-CCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhh
Confidence            9999 89999999999876 7788999999999999999999999999999999865  7888888876554 5667788


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC----------CCHH-HHHHHhhCCCCCCCCCHHHHHH
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL----------SDEK-FLEEVKCRTPMERPGEPKEVSS  217 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~dva~  217 (251)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+.+.          ..++ .........|++|+.+|+|||+
T Consensus       167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~  246 (272)
T d1g0oa_         167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR  246 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999999999753321          1122 2223457899999999999999


Q ss_pred             HHHHHcCCCCCCccccEEEeCCCccc
Q 041276          218 LVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       218 ~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +++||+++.++++|||+|.||||++|
T Consensus       247 ~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         247 VVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHhCchhcCccCceEeECCCCCC
Confidence            99999999999999999999999876

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.6e-49  Score=315.46  Aligned_cols=220  Identities=30%  Similarity=0.407  Sum_probs=190.2

Q ss_pred             CCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        14 ~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      .|+||+||||||++|||                   +.+.+++.   ..+.+.++.++.+|++++++++++++++.+++ 
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA---VAALEAEAIAVVADVSDPKAVEAVFAEALEEF-   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHcCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            57999999999999999                   33333332   33335678889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.++|.++|+|+++  +.++++||.+ ..+.+++..|+++|+
T Consensus        78 g~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a-~~~~~~~~~Y~~sK~  153 (241)
T d2a4ka1          78 GRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVA-GLGAFGLAHYAAGKL  153 (241)
T ss_dssp             SCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCT-TCCHHHHHHHHHCSS
T ss_pred             CCccEecccccccc-ccchhhhhccccccccccccccccccccccccccccc--cceeeccccc-cccccCccccchhhH
Confidence            89999999999876 7888999999999999999999999999999998765  4566555554 455578889999999


Q ss_pred             HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          155 AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       155 a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      |+++|+|++|+|++++|||||+|+||+++|++.+..  .++..+.+.++.|++|+.+|+|||++++||+|++++++|||+
T Consensus       154 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~  231 (241)
T d2a4ka1         154 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQA  231 (241)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCce
Confidence            999999999999999999999999999999998764  466778888899999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 041276          235 ICVDGGFTV  243 (251)
Q Consensus       235 i~vdgG~~~  243 (251)
                      |.||||+++
T Consensus       232 i~vDGG~s~  240 (241)
T d2a4ka1         232 LYVDGGRSI  240 (241)
T ss_dssp             EEESTTTTT
T ss_pred             EEeCCCccc
Confidence            999999986

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.6e-47  Score=306.10  Aligned_cols=211  Identities=21%  Similarity=0.319  Sum_probs=192.1

Q ss_pred             CEEEEecCCCCcC--------------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           18 MTALVTGGTKGLG--------------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        18 k~vlItGas~giG--------------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ++||||||++|||                          +.+.++++.+++++.+.++.++.+|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            6799999999999                          35667788888888888999999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      +| |++|+||||||... ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||.++..+.++...|++
T Consensus        82 ~~-g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RY-GHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HT-SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             Hc-CCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            99 89999999999886 78899999999999999999999999999999999998899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYIT  231 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (251)
                      ||+|+.+|+++++.|++++|||||+|+||+++|+|.+.....           ...++.+|+|+|+.+++|+++.+++++
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------~~~~~~~PedvA~~v~~l~s~~~~~~~  228 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPSRTVV  228 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------TGGGSBCHHHHHHHHHHHHTSCTTEEE
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------hHhcCCCHHHHHHHHHHHHcCCccCcc
Confidence            999999999999999999999999999999999998765332           123457899999999999999888888


Q ss_pred             ccE-EEeCCCc
Q 041276          232 GQT-ICVDGGF  241 (251)
Q Consensus       232 G~~-i~vdgG~  241 (251)
                      |+. |..+||-
T Consensus       229 ~~~~i~p~~G~  239 (240)
T d2bd0a1         229 EEIILRPTSGD  239 (240)
T ss_dssp             EEEEEEETTCC
T ss_pred             CCEEEEecCCC
Confidence            874 5577763

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=315.42  Aligned_cols=221  Identities=21%  Similarity=0.327  Sum_probs=194.0

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      +.||+||||||++|||                   +.++++++.+++.+.  +.++.++.+|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4799999999999999                   667788888888664  4578999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG---AGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       |++|+||||||... .        ++|++.+++|+.+++.+++.++|+|++++   .|+||++||.++..+.+....|+
T Consensus        81 -G~iDilVnnAg~~~-~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  150 (254)
T d2gdza1          81 -GRLDILVNNAGVNN-E--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  150 (254)
T ss_dssp             -SCCCEEEECCCCCC-S--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             -CCcCeecccccccc-c--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchH
Confidence             89999999999865 1        34899999999999999999999998764   47899999999999999999999


Q ss_pred             HhHHHHHHHHHH--HHHHHccCCeEEEEEecCcccCCCCCCCCCC------HHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          151 ATKGAMNQLAKN--LACEWARDNIRINSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       151 ~sK~a~~~~~~~--la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      +||+|+.+|+|+  |+.|++++|||||+|+||+++|+|.+.....      .+..+.+....|++|+.+|+|||+.++||
T Consensus       151 asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL  230 (254)
T d2gdza1         151 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999997  6889999999999999999999998665432      23345556677889999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccccccc
Q 041276          223 CMPAASYITGQTICVDGGFTVNGFF  247 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG~~~~~~~  247 (251)
                      ++++  ++|||+|.||||..++--+
T Consensus       231 ~s~~--~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         231 IEDD--ALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHCT--TCSSCEEEEETTTEEEECC
T ss_pred             HcCC--CCCCCEEEECCCCeeeccc
Confidence            9865  4999999999999876443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-47  Score=308.30  Aligned_cols=220  Identities=25%  Similarity=0.384  Sum_probs=192.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------------EEEeccCCCHHHHHHHHHHHHHhc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------------TGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------------~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      -.|+||++|||||++|||     .++++.+.++|.++                   ....+|+.+.+.++...    +.+
T Consensus         2 ~~l~gK~alITGas~GIG-----~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~   72 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIG-----QAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA----NEV   72 (245)
T ss_dssp             CTTTTCEEEESSTTSHHH-----HHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHH----HHC
T ss_pred             CCCCCCEEEEeCCCCHHH-----HHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccc----ccc
Confidence            358999999999999999     66777776665444                   45567887766665554    445


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc-cCCCCChhhHHh
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV-LSTNLGTIYAAT  152 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~Y~~s  152 (251)
                       +++|+||||+|... ..++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.|+||+++|..+. .+.+....|+++
T Consensus        73 -~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~s  150 (245)
T d2ag5a1          73 -ERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTT  150 (245)
T ss_dssp             -SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHH
T ss_pred             -ccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHH
Confidence             79999999999887 678889999999999999999999999999999999999999999998775 567888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC----CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY----LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |+|+++|+|++|.|++++|||||+|+||+++||+.+..    ...+...+.+....|++|+.+|+|+|+.+.||++++++
T Consensus       151 Kaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            99999999999999999999999999999999987542    12345667777899999999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      ++|||+|.||||+++
T Consensus       231 ~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         231 YVTGNPVIIDGGWSL  245 (245)
T ss_dssp             TCCSCEEEECTTGGG
T ss_pred             CCcCceEEeCCCcCC
Confidence            999999999999986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=5.7e-46  Score=306.40  Aligned_cols=229  Identities=26%  Similarity=0.379  Sum_probs=202.0

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTK-CFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      .+|+||++|||||++|||                   +.++++++.+++.+. +.++.++.+|+++.++++++++.+.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            489999999999999999                   566777777776544 678889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-CCCceEEEecccccccCCCCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKA-SGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                      + +++|++|||||... ..++.+.+.+++.+.+.+|+...+.+.+...+.+.. +..+.+++++|.++..+.+....|++
T Consensus       101 ~-g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         101 A-GHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             T-CSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             c-cccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            9 89999999999876 778889999999999999999999999888777665 45578889999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      +|+|+.+|+|++|.|++++|||||+|+||+++|++...... .+...+......|++|+++|+|+|+++.||++++++++
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~i  258 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI  258 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999999876543 45677888889999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 041276          231 TGQTICVDGGFTV  243 (251)
Q Consensus       231 ~G~~i~vdgG~~~  243 (251)
                      |||+|.||||.++
T Consensus       259 tG~~i~vDGG~~l  271 (294)
T d1w6ua_         259 NGAVIKFDGGEEV  271 (294)
T ss_dssp             CSCEEEESTTHHH
T ss_pred             CCcEEEECCChhh
Confidence            9999999999764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-46  Score=302.11  Aligned_cols=227  Identities=21%  Similarity=0.236  Sum_probs=197.2

Q ss_pred             CcccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHH
Q 041276           10 QDRWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKC--FKVTGSVCDASSRAEREKLMKQ   68 (251)
Q Consensus        10 ~~~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   68 (251)
                      +.|..++||+||||||++|||                   ++++++++.+++.+.+  .++.++.||+++++++++++++
T Consensus         3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           3 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            456679999999999999999                   7788899999998875  5789999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccCC--C
Q 041276           69 VSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLST--N  144 (251)
Q Consensus        69 i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~~--~  144 (251)
                      +.+++ ++||+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++  .|+||++||.++....  +
T Consensus        83 ~~~~~-g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~  160 (257)
T d1xg5a_          83 IRSQH-SGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  160 (257)
T ss_dssp             HHHHH-CCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHhc-CCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc
Confidence            99999 89999999999886 77899999999999999999999999999999998764  6899999999987654  4


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHH--ccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHH
Q 041276          145 LGTIYAATKGAMNQLAKNLACEW--ARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFL  222 (251)
Q Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (251)
                      ....|+++|+|+.+|+|+|+.|+  +++||+||+|+||+++|++.......  ..+......|.+++.+|+|||++++||
T Consensus       161 ~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~--~~~~~~~~~~~~r~~~pedvA~~v~fL  238 (257)
T d1xg5a_         161 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK--DPEKAAATYEQMKCLKPEDVAEAVIYV  238 (257)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT--CHHHHHHHHC---CBCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh--hHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            56679999999999999999998  68899999999999999987654332  234455567999999999999999999


Q ss_pred             cCCCCCCccccEEEeCCC
Q 041276          223 CMPAASYITGQTICVDGG  240 (251)
Q Consensus       223 ~~~~~~~~~G~~i~vdgG  240 (251)
                      ++++++++|||++.-++|
T Consensus       239 ~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         239 LSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHSCTTEEEEEEEEEETT
T ss_pred             hCChhcCeECCEEEEeCC
Confidence            999999999997544443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-46  Score=310.07  Aligned_cols=214  Identities=24%  Similarity=0.344  Sum_probs=187.1

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------------------------EEeccCCCHHH
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------------------GSVCDASSRAE   61 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------------------------~~~~D~~~~~~   61 (251)
                      .++|+||++|||||++|||     .++++.|.+.|.++.                              ...+|+++.++
T Consensus         2 Pm~l~gKvalITGas~GIG-----~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLG-----RAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHH-----HHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHH-----HHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHH
Confidence            4678999999999999999     555555555544433                              34689999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc
Q 041276           62 REKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL  141 (251)
Q Consensus        62 ~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~  141 (251)
                      ++++++++.+++ |+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..
T Consensus        77 ~~~~v~~~~~~~-G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~  154 (302)
T d1gz6a_          77 GEKLVKTALDTF-GRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  154 (302)
T ss_dssp             HHHHHHHHHHHT-SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC
Confidence            999999999999 89999999999987 7889999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (251)
                      +.++...|++||+|+.+|+++++.|++++|||||+|+||++.|++....  .++..          +..+|+|||+.++|
T Consensus       155 ~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~--~~~~~----------~~~~PedvA~~v~f  222 (302)
T d1gz6a_         155 GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM--PEDLV----------EALKPEYVAPLVLW  222 (302)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS--CHHHH----------HHSCGGGTHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC--cHhhH----------hcCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988765443  12221          23469999999999


Q ss_pred             HcCCCCCCccccEEEeCCCccccc
Q 041276          222 LCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      |||+.+ ++|||+|.||||+.-..
T Consensus       223 L~S~~a-~itG~~i~vdGG~~~~~  245 (302)
T d1gz6a_         223 LCHESC-EENGGLFEVGAGWIGKL  245 (302)
T ss_dssp             HTSTTC-CCCSCEEEEETTEEEEE
T ss_pred             HcCCCc-CCCCcEEEeCCCceeEE
Confidence            999765 78999999999986543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4e-44  Score=299.39  Aligned_cols=222  Identities=19%  Similarity=0.224  Sum_probs=191.7

Q ss_pred             CCEEEEec--CCCCcCcHHHHHHHHHHHHhcCCeeEEE------------------------------------------
Q 041276           17 GMTALVTG--GTKGLGNEAELNECLREWKTKCFKVTGS------------------------------------------   52 (251)
Q Consensus        17 ~k~vlItG--as~giG~~~~~~~~~~~~~~~~~~~~~~------------------------------------------   52 (251)
                      +|++||||  +++|||     ..+++.+.++|.++.+.                                          
T Consensus         2 ~kVAlITGaa~s~GIG-----~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYG-----WGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASF   76 (329)
T ss_dssp             CCEEEEECCSSSSSHH-----HHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTC
T ss_pred             CcEEEEeCCCCCChHH-----HHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhccccccee
Confidence            69999999  668999     78888888877666542                                          


Q ss_pred             --------------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHH
Q 041276           53 --------------VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESAYHLSQ  117 (251)
Q Consensus        53 --------------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~  117 (251)
                                    .+|+++.++++++++.+.+.| |+||++|||+|...+ ..++.+.+.++|++.+++|+++.+.++|
T Consensus        77 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k  155 (329)
T d1uh5a_          77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence                          236677888999999999999 899999999997653 3478899999999999999999999999


Q ss_pred             HHHHHHHhCCCceEEEecccccccCCCC-ChhhHHhHHHHHHHHHHHHHHHcc-CCeEEEEEecCcccCCCCCCC-----
Q 041276          118 LAHPLLKASGAGNIILVSSVCGVLSTNL-GTIYAATKGAMNQLAKNLACEWAR-DNIRINSVAPWFITTPLTEPY-----  190 (251)
Q Consensus       118 ~~~~~m~~~~~g~iv~vss~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~i~pG~v~t~~~~~~-----  190 (251)
                      +++|+|+++  |+||++||.++..+.|+ ...|+++|+|+++|+|++|.||++ +|||||+|+||+++|+..+..     
T Consensus       156 ~~~~~m~~~--GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~  233 (329)
T d1uh5a_         156 YFVNIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNN  233 (329)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC----
T ss_pred             HHHhhcccc--cccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhh
Confidence            999999654  89999999999998876 467999999999999999999986 699999999999999543221     


Q ss_pred             --------------------------------------CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccc
Q 041276          191 --------------------------------------LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITG  232 (251)
Q Consensus       191 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (251)
                                                            ...+...+.+....|++|+.+|+|||.+++||+|+.++++||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTG  313 (329)
T d1uh5a_         234 TYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITG  313 (329)
T ss_dssp             --------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             hhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccC
Confidence                                                  112556677778899999999999999999999999999999


Q ss_pred             cEEEeCCCcccccc
Q 041276          233 QTICVDGGFTVNGF  246 (251)
Q Consensus       233 ~~i~vdgG~~~~~~  246 (251)
                      |+|.||||+++.++
T Consensus       314 q~i~VDGG~~~~g~  327 (329)
T d1uh5a_         314 QTIYVDNGLNIMFL  327 (329)
T ss_dssp             CEEEESTTGGGCSS
T ss_pred             CeEEECCCcccccC
Confidence            99999999988653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-43  Score=287.45  Aligned_cols=221  Identities=19%  Similarity=0.191  Sum_probs=193.3

Q ss_pred             CCCCCEEEEecCCCCcC----------------------cHHHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 041276           14 SLQGMTALVTGGTKGLG----------------------NEAELNECLREWKTK--CFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        14 ~l~~k~vlItGas~giG----------------------~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      .|+||++||||||+|||                      +.++++++.+++...  +.++.++.+|++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            68999999999999999                      556777888888765  458899999999999999999998


Q ss_pred             HHhc---CCCccEEEEcccCCC--CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CceEEEecccccccC
Q 041276           70 SSLF---NGKLNILINNVGTNY--TTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG--AGNIILVSSVCGVLS  142 (251)
Q Consensus        70 ~~~~---~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~g~iv~vss~~~~~~  142 (251)
                      .+..   ++.+|++|||||...  +..++.+.+.++|++++++|+.+++++++.++|+|++++  .|+||++||.++..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            7732   257999999999764  245678899999999999999999999999999999875  589999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC---CCCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          143 TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY---LSDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                      .+++..|++||+|+.+|+++|+.|  .+|||||+|+||+++|+|.+..   ...++..+.+....|.+++.+|+|+|+.+
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999  6799999999999999987543   23456666666677889999999999999


Q ss_pred             HHHcCCCCCCccccEEEe
Q 041276          220 AFLCMPAASYITGQTICV  237 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~v  237 (251)
                      ++|+++ ++++|||.|+|
T Consensus       241 ~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         241 LGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHH-CCSCTTEEEET
T ss_pred             HHHhhh-ccCCCCCeEEe
Confidence            999975 57999999986

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-43  Score=286.32  Aligned_cols=230  Identities=17%  Similarity=0.273  Sum_probs=199.2

Q ss_pred             CCCCCEEEEecCCC--CcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTK--GLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~--giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      -|+||+||||||++  |||                  ..+++.+..+++............|+++..++...++++...+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            37899999999999  677                  1112223333444444566778899999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           74 NGKLNILINNVGTNYTT----KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                       +++|++|||++.....    ........+.|...+++|+.+.+.+++.+.+.|++.  +.|+++||..+..+.+....|
T Consensus        82 -~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~~~~~~~Y  158 (258)
T d1qsga_          82 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNYNVM  158 (258)
T ss_dssp             -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBCTTTTHH
T ss_pred             -cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccCCCCcHHH
Confidence             8999999999886421    122356778899999999999999999999988654  689999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      ++||+|+.+|+|++|.|++++|||||+|+||+++|++.......+...+.+.++.|++|+.+|||+|+.+.||+++.+++
T Consensus       159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~  238 (258)
T d1qsga_         159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999999887777778888888999999999999999999999999999


Q ss_pred             ccccEEEeCCCcccccc
Q 041276          230 ITGQTICVDGGFTVNGF  246 (251)
Q Consensus       230 ~~G~~i~vdgG~~~~~~  246 (251)
                      +|||+|.||||+++.++
T Consensus       239 itG~~i~vDGG~~i~g~  255 (258)
T d1qsga_         239 ISGEVVHVDGGFSIAAM  255 (258)
T ss_dssp             CCSCEEEESTTGGGBCS
T ss_pred             ccCceEEECcCHHHhcC
Confidence            99999999999999987

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.3e-43  Score=285.67  Aligned_cols=218  Identities=17%  Similarity=0.155  Sum_probs=174.6

Q ss_pred             cCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCC-CHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDAS-SRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~-~~~~~~~~~~~i~~   71 (251)
                      ++|+||+||||||++|||                   +.+.++++.+.... .+.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            478999999999999999                   11222222221121 2347888999998 67789999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC---CCceEEEecccccccCCCCChh
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS---GAGNIILVSSVCGVLSTNLGTI  148 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---~~g~iv~vss~~~~~~~~~~~~  148 (251)
                      ++ ++||+||||||...         ++.|++++++|+.+++.+++.++|+|.++   +.|+||+++|.++..+.+++..
T Consensus        81 ~~-g~iDilvnnAG~~~---------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~  150 (254)
T d1sbya1          81 QL-KTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HH-SCCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             Hc-CCCCEEEeCCCCCC---------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH
Confidence            99 89999999999653         46689999999999999999999999775   3589999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCC
Q 041276          149 YAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAAS  228 (251)
Q Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (251)
                      |++||+|+.+|+++|+.|++++|||||+|+||+++|||.+.....++............+..+||++|+.++++++.   
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~---  227 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC---
Confidence            99999999999999999999999999999999999998765443222111111111233456899999999888743   


Q ss_pred             CccccEEEeCCCccc
Q 041276          229 YITGQTICVDGGFTV  243 (251)
Q Consensus       229 ~~~G~~i~vdgG~~~  243 (251)
                      ..||+++.+|||.+-
T Consensus       228 ~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         228 NKNGAIWKLDLGTLE  242 (254)
T ss_dssp             CCTTCEEEEETTEEE
T ss_pred             CCCCCEEEECCCEeC
Confidence            359999999999743

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.4e-43  Score=288.42  Aligned_cols=230  Identities=23%  Similarity=0.283  Sum_probs=196.2

Q ss_pred             ccCCCCCEEEEecCCC--CcCcHHHHHHHHHHHHhcCCeeEEE------------------------------------e
Q 041276           12 RWSLQGMTALVTGGTK--GLGNEAELNECLREWKTKCFKVTGS------------------------------------V   53 (251)
Q Consensus        12 ~~~l~~k~vlItGas~--giG~~~~~~~~~~~~~~~~~~~~~~------------------------------------~   53 (251)
                      .++|+||++|||||+|  |||     .++++.|.++|.++...                                    .
T Consensus         3 ~~~L~gK~alVTGass~~GIG-----~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYG-----WAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYP   77 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHH-----HHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEE
T ss_pred             CcCCCCCEEEEECCCCCchHH-----HHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhh
Confidence            4679999999999876  999     78888888877666543                                    1


Q ss_pred             cc--------------------CCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCC-CCCCCCCCHHHHHHHHHhhhHHH
Q 041276           54 CD--------------------ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYT-TKPTVEYMAEDLSFLMSTNFESA  112 (251)
Q Consensus        54 ~D--------------------~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~  112 (251)
                      +|                    .++...++++++++.++| +++|+||||||.... ..++.+.+.++|++.+++|+++.
T Consensus        78 ~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~  156 (297)
T d1d7oa_          78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSF  156 (297)
T ss_dssp             ECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             hhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhh
Confidence            12                    244556789999999999 899999999997642 45788999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCceEEEeccccccc-CCCCChhhHHhHHHHHHHHHHHHHHHc-cCCeEEEEEecCcccCCCCCCC
Q 041276          113 YHLSQLAHPLLKASGAGNIILVSSVCGVL-STNLGTIYAATKGAMNQLAKNLACEWA-RDNIRINSVAPWFITTPLTEPY  190 (251)
Q Consensus       113 ~~~~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pG~v~t~~~~~~  190 (251)
                      +.++++++|.|.++  |+++++++.+... ..+....|+++|+++..+++.++.|++ ++|||||+|+||+++|++.+..
T Consensus       157 ~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~  234 (297)
T d1d7oa_         157 VSLLSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             HHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             hhhhhHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc
Confidence            99999999988766  5666666555443 456677899999999999999999996 6899999999999999999876


Q ss_pred             CCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccccccc
Q 041276          191 LSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNGFFFR  249 (251)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~~~~~  249 (251)
                      ...++..+....+.|++|+.+|+|||++++||+|+.++++|||+|.||||++..++-+.
T Consensus       235 ~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~~  293 (297)
T d1d7oa_         235 GFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALD  293 (297)
T ss_dssp             SHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTT
T ss_pred             cCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCCC
Confidence            66677888888899999999999999999999999999999999999999998887554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-43  Score=279.35  Aligned_cols=200  Identities=25%  Similarity=0.329  Sum_probs=180.9

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+++||++||||||+|||                   +.++++++.+++...+.+++++.||++|+++++++++++.++
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999                   778899999999988889999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      + +++|++|||||... ...+.+.+.+.|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.+++..|++|
T Consensus        82 ~-g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  159 (244)
T d1yb1a_          82 I-GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS  159 (244)
T ss_dssp             T-CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             c-CCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHH
Confidence            9 89999999999987 677888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcc---CCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCC
Q 041276          153 KGAMNQLAKNLACEWAR---DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~---~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (251)
                      |+|+.+|+++|+.|+++   +||+||.|+||+++|+|.+..   ..         +..+..+|+++|+.++..+..
T Consensus       160 Kaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~---~~---------~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---ST---------SLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---HH---------HHCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc---Cc---------cccCCCCHHHHHHHHHHHHhc
Confidence            99999999999999976   589999999999999987642   11         223456899999999876643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=6.4e-42  Score=280.63  Aligned_cols=221  Identities=26%  Similarity=0.347  Sum_probs=180.3

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEE-----------------EeccCCCH
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTG-----------------SVCDASSR   59 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~-----------------~~~D~~~~   59 (251)
                      -|+|||||++|||                    +.+.++++.+++.+. +.....                 ..+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            4899999999999                    334444555555433 222222                 35679999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHH--------------HHHHHhhhHHHHHHHHHHHHHHH-
Q 041276           60 AEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDL--------------SFLMSTNFESAYHLSQLAHPLLK-  124 (251)
Q Consensus        60 ~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~~~~~~~~~m~-  124 (251)
                      ++++++++++.+++ |+||+||||||... ..++.+.+.++|              ...+.+|+.+++.+++.+.+.+. 
T Consensus        83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHW-GRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            99999999999999 89999999999876 555655555444              45789999999999999988754 


Q ss_pred             -----hCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHH
Q 041276          125 -----ASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEE  199 (251)
Q Consensus       125 -----~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~  199 (251)
                           +.+.++|++++|.....+.++...|++||+|+.+|+|++|+|++++|||||+|+||++.+...    ..++..+.
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~----~~~~~~~~  236 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD----MPPAVWEG  236 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG----SCHHHHHH
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc----CCHHHHHH
Confidence                 334679999999999999999999999999999999999999999999999999998654332    24667788


Q ss_pred             HhhCCCC-CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          200 VKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       200 ~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ...+.|+ +|+++|+|+|++++||+|++++|+|||+|.||||+++.
T Consensus       237 ~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         237 HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            8888886 89999999999999999999999999999999999875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-43  Score=286.08  Aligned_cols=214  Identities=19%  Similarity=0.266  Sum_probs=175.1

Q ss_pred             CCEEEEecCCCCcC-------------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLG-------------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        17 ~k~vlItGas~giG-------------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .|+|||||||+|||                         ...++.+..+++...+.++.++.+|++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            58999999999999                         12334455555555677899999999999999999998743


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHH
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAA  151 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~  151 (251)
                         +++|+++||+|... ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.+....|++
T Consensus        82 ---g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 ---GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             ---SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             ---cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence               78999999999887 77888999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHH---------HHH------hhCCCCCCCCCHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFL---------EEV------KCRTPMERPGEPKEVS  216 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~dva  216 (251)
                      ||+|+.+|+++|+.|++++||+||+|+||+++|+|.+.....++..         +.+      ....+..+..+|||||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            9999999999999999999999999999999999988765442211         111      1223445678999999


Q ss_pred             HHHHHHcCCC---CCCccccE
Q 041276          217 SLVAFLCMPA---ASYITGQT  234 (251)
Q Consensus       217 ~~~~~l~~~~---~~~~~G~~  234 (251)
                      +.+++++...   .+|++|+.
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHHhCCCCCeEEecHHH
Confidence            9999999654   35667764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-41  Score=272.75  Aligned_cols=214  Identities=23%  Similarity=0.359  Sum_probs=179.6

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC---------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCF---------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      +|+||++|||||++|||     .++++++.+.|.                     ......+|+.+.+.++..+.++...
T Consensus         2 slkGKvalITGas~GIG-----~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLG-----LATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence            68999999999999999     555555554443                     4455678999999999999999998


Q ss_pred             cCCCccEEEEcccCCCC-----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCceEEEeccccccc
Q 041276           73 FNGKLNILINNVGTNYT-----TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS------GAGNIILVSSVCGVL  141 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~------~~g~iv~vss~~~~~  141 (251)
                      + ..+|.++++++....     ..+..+.+.++|++.+++|+.+++++++++.|+|..+      +.|+||++||..+..
T Consensus        77 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          77 F-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             H-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             c-ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            8 899999999876542     2355678899999999999999999999999998754      568999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHHHHHH
Q 041276          142 STNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVA  220 (251)
Q Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~  220 (251)
                      +.++...|++||+|+.+|+|+|+.|++++|||||+|+||+++|+|.....  ++..+.+..+.|+ +|+++|+|||+++.
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~~R~g~peevA~~v~  233 (248)
T d2o23a1         156 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHLVQ  233 (248)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC--HHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987653  3455566677886 89999999999999


Q ss_pred             HHcCCCCCCccccEEEe
Q 041276          221 FLCMPAASYITGQTICV  237 (251)
Q Consensus       221 ~l~~~~~~~~~G~~i~v  237 (251)
                      ||++  ++|+|||+|.|
T Consensus       234 fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         234 AIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHH--CTTCCSCEEEE
T ss_pred             HHHh--CCCCCceEeEC
Confidence            9996  68999999986

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.2e-41  Score=267.41  Aligned_cols=217  Identities=24%  Similarity=0.319  Sum_probs=186.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------EEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------GSVCDASSRAEREKLMKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~a   84 (251)
                      +|++|||||++|||     .++++.+.++|.++.            ...+|+++......+........  ..+.++.++
T Consensus         1 DK~alITGas~GIG-----~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~   73 (241)
T d1uaya_           1 ERSALVTGGASGLG-----RAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEA--PLFAVVSAA   73 (241)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHS--CEEEEEECC
T ss_pred             CCEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEECCcccccceEeeccccchhhhHHHHHhhhccc--cccchhhhh
Confidence            59999999999999     888888888776554            45799999999999999888875  566677777


Q ss_pred             cCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHH------HhCCCceEEEecccccccCCCCChhhHHhHHH
Q 041276           85 GTNYT---TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLL------KASGAGNIILVSSVCGVLSTNLGTIYAATKGA  155 (251)
Q Consensus        85 g~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m------~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a  155 (251)
                      +....   .......+.+.|++.+++|+.+.+.+++.+.+.+      .+++.|+||++||.++..+.++...|+++|+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  153 (241)
T d1uaya_          74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG  153 (241)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHH
Confidence            65432   2344567889999999999999999999999984      45567999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC-CCCCCHHHHHHHHHHHcCCCCCCccccE
Q 041276          156 MNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM-ERPGEPKEVSSLVAFLCMPAASYITGQT  234 (251)
Q Consensus       156 ~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (251)
                      +.+|+|++|.|++++|||||+|+||+++|++.....  ++..+....+.|+ +|+++|+|||+.++||++  ++++|||+
T Consensus       154 l~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~~iTG~~  229 (241)
T d1uaya_         154 VVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILE--NPMLNGEV  229 (241)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CTTCCSCE
T ss_pred             HHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCCCCE
Confidence            999999999999999999999999999999887653  4445555566665 899999999999999997  57999999


Q ss_pred             EEeCCCcccc
Q 041276          235 ICVDGGFTVN  244 (251)
Q Consensus       235 i~vdgG~~~~  244 (251)
                      |.||||++|.
T Consensus       230 i~VDGG~~m~  239 (241)
T d1uaya_         230 VRLDGALRMA  239 (241)
T ss_dssp             EEESTTCCCC
T ss_pred             EEECCcccCC
Confidence            9999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.8e-40  Score=269.59  Aligned_cols=230  Identities=18%  Similarity=0.232  Sum_probs=187.6

Q ss_pred             CCCCCEEEEecCCC--CcC------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           14 SLQGMTALVTGGTK--GLG------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        14 ~l~~k~vlItGas~--giG------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      -|+||++|||||+|  |||                  ..+++++..+++.+.+....+..+|+++.++++++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            37899999999765  899                  2233444555666666677788999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           74 NGKLNILINNVGTNYTT---KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                       +++|++|||+|.....   ....+...+.+...+.++..+.+.+.+...+.++  ..+.|+++++.+...+.+....|+
T Consensus        82 -g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~y~  158 (274)
T d2pd4a1          82 -GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKYMAHYNVMG  158 (274)
T ss_dssp             -SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTCHHHH
T ss_pred             -CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc--cCcceeeecccccccccccchhhh
Confidence             8999999999987532   2333445555666666666666655555543322  224577777777778888889999


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYI  230 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (251)
                      ++|+|+.+|+|+++.|++++|||||+|+||++.|++.......++.........|.+|+.+|+|||+.++||+|+.++++
T Consensus       159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~i  238 (274)
T d2pd4a1         159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGV  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCC
Confidence            99999999999999999999999999999999999998877767777777888999999999999999999999999999


Q ss_pred             cccEEEeCCCcccccc
Q 041276          231 TGQTICVDGGFTVNGF  246 (251)
Q Consensus       231 ~G~~i~vdgG~~~~~~  246 (251)
                      |||+|.||||+++.++
T Consensus       239 tG~~i~vDGG~~~~g~  254 (274)
T d2pd4a1         239 SGEVHFVDAGYHVMGM  254 (274)
T ss_dssp             CSCEEEESTTGGGBSS
T ss_pred             cCceEEECCChhhccC
Confidence            9999999999987664

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-40  Score=265.10  Aligned_cols=205  Identities=18%  Similarity=0.214  Sum_probs=177.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE--------------EeccCCCHHHHHHHHHHHHHhcC-CCccEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG--------------SVCDASSRAEREKLMKQVSSLFN-GKLNIL   80 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~--------------~~~D~~~~~~~~~~~~~i~~~~~-~~id~l   80 (251)
                      +||+||||||++|||     .++++.+.+.|.++..              ..+|.++.++++.+...+.+.++ +++|+|
T Consensus         1 egK~vlITGas~GIG-----~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALG-----SRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            589999999999999     8999999988866643              35677788888888888877652 479999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHH
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA  160 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  160 (251)
                      |||||.........+.+.++|++.+++|+++.+.+++.++|+|++.  |+||++||.++..+.+.+..|++||+|+.+|+
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  153 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLC  153 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHHHHHHH
Confidence            9999976645666778889999999999999999999999999754  89999999999999999999999999999999


Q ss_pred             HHHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEe
Q 041276          161 KNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQTICV  237 (251)
Q Consensus       161 ~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~v  237 (251)
                      ++|+.|++  ++||+||+|+||+++|||.+..++.          .+..++.+|+++|+.+.+|+++.+.++||+.|.|
T Consensus       154 ~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         154 QSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence            99999998  5799999999999999986544332          2334567899999999999999999999997765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.6e-38  Score=255.16  Aligned_cols=222  Identities=23%  Similarity=0.312  Sum_probs=181.5

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhc-CCeeEEEeccCC----CHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTK-CFKVTGSVCDAS----SRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~----~~~~~~~~~~~i~~~   72 (251)
                      .|+||||||+|||                    ++...+++.+++... +.+.....+|..    ..+.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4799999999999                    234445566666554 445666665544    467888999999999


Q ss_pred             cCCCccEEEEcccCCCCCCC----------CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCceEEEeccc
Q 041276           73 FNGKLNILINNVGTNYTTKP----------TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-----GAGNIILVSSV  137 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~g~iv~vss~  137 (251)
                      + |++|++|||||+..+...          ..+...+.+...+..|+.+.+...+...+.+...     ..+.++++++.
T Consensus        82 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             h-CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            9 899999999998752221          1223456678889999999999998888777543     34688899999


Q ss_pred             ccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCC-CCHHHHH
Q 041276          138 CGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERP-GEPKEVS  216 (251)
Q Consensus       138 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva  216 (251)
                      .+..+.+++..|++||+|+++|+|++|.|++++|||||+|+||+++|++..    .++..+.+.+.+|+++. ++|||+|
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva  236 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIA  236 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999998753    36677788888999765 8999999


Q ss_pred             HHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          217 SLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       217 ~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ++++||++++++++|||+|.||||+++.
T Consensus       237 ~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         237 DAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhCchhCCccCCeEEECccHhhh
Confidence            9999999999999999999999999886

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=7.2e-39  Score=257.42  Aligned_cols=205  Identities=21%  Similarity=0.237  Sum_probs=165.4

Q ss_pred             CEEEEecCCCCcC----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHH--hc
Q 041276           18 MTALVTGGTKGLG----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSS--LF   73 (251)
Q Consensus        18 k~vlItGas~giG----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~--~~   73 (251)
                      |+|||||||+|||                      +.++++++. ++.+.+.++.++.+|++|+++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            8999999999999                      222333332 3333456789999999999999999999854  56


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----------CCceEEEecccccccC
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-----------GAGNIILVSSVCGVLS  142 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----------~~g~iv~vss~~~~~~  142 (251)
                       +++|+||||||+.....++.+.+.++|++.+++|+.+++.+++.++|+|+++           +.|++|+++|.++...
T Consensus        82 -~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 -QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             -GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             -CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence             7899999999987756678899999999999999999999999999999864           3589999999987653


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 041276          143 ---TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLV  219 (251)
Q Consensus       143 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (251)
                         .+++..|++||+|+.+|+++++.|++++||+||+|+||+++|+|.+...+                 .++++.++.+
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~-----------------~~~~~~~~~i  223 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP-----------------LDVPTSTGQI  223 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS-----------------BCHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC-----------------CCchHHHHHH
Confidence               45677999999999999999999999999999999999999999865322                 1233334444


Q ss_pred             HHHcCCCCCCccccEEEeCCCc
Q 041276          220 AFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                      +.++.......||+.|++||+.
T Consensus       224 ~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         224 VQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHhcCccCCCcEEEECCeE
Confidence            4444434445689999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-39  Score=264.26  Aligned_cols=198  Identities=24%  Similarity=0.332  Sum_probs=172.9

Q ss_pred             CEEEEecCCCCcC--------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLG--------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG--------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      +|+|||||++|||                    +.++++++.+++++.+.++.++.+|++|.++++++++++.+++ ++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~i   82 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL   82 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCc
Confidence            4569999999999                    6788889999999988899999999999999999999999999 899


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--------------
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--------------  143 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--------------  143 (251)
                      |+||||||+.. ..+..+.+.++|+++|++|+++++.+++.++|+|+++  |+||+++|+.+..+.              
T Consensus        83 DiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          83 DVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             EEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhccc
Confidence            99999999976 6667788889999999999999999999999999764  899999998764321              


Q ss_pred             ---------------------------CCChhhHHhHHHHHHHHHHHHHHHcc----CCeEEEEEecCcccCCCCCCCCC
Q 041276          144 ---------------------------NLGTIYAATKGAMNQLAKNLACEWAR----DNIRINSVAPWFITTPLTEPYLS  192 (251)
Q Consensus       144 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~i~pG~v~t~~~~~~~~  192 (251)
                                                 .....|++||+++..|++.+++++++    .||+||+|+||+++|+|.++.. 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~-  238 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA-  238 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC-
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc-
Confidence                                       12346999999999999999999975    5999999999999999975431 


Q ss_pred             CHHHHHHHhhCCCCCCCCCHHHHHHHHHHHc--CCCCCCccccEEE
Q 041276          193 DEKFLEEVKCRTPMERPGEPKEVSSLVAFLC--MPAASYITGQTIC  236 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--~~~~~~~~G~~i~  236 (251)
                                      ..+|+|+|+.++|++  .++....+|+.+.
T Consensus       239 ----------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         239 ----------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             ----------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ----------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                            237999999999987  4566778998886

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.2e-38  Score=254.72  Aligned_cols=224  Identities=19%  Similarity=0.147  Sum_probs=182.1

Q ss_pred             CCCCCEEEEec--CCCCcCcHHHHHHHHHHHHh----------------------cCCeeEEEeccCCCHHHHHHHHHHH
Q 041276           14 SLQGMTALVTG--GTKGLGNEAELNECLREWKT----------------------KCFKVTGSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        14 ~l~~k~vlItG--as~giG~~~~~~~~~~~~~~----------------------~~~~~~~~~~D~~~~~~~~~~~~~i   69 (251)
                      -|+||++||||  |++|||     .++++++.+                      .+.+...+.+|++++++++++++.+
T Consensus         3 ~l~gK~~lItGaag~~GIG-----~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIA-----FHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHH-----HHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHH-----HHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchh
Confidence            47899999999  467999     333333322                      2445667899999999999999999


Q ss_pred             HHhcC--CCccEEEEcccCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           70 SSLFN--GKLNILINNVGTNYT----TKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        70 ~~~~~--~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      .+.+.  +++|+++||+|+...    ..++.+.+.++|.+.+.+|+...+...+...+++..   +.+++++|.....+.
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~  154 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAM  154 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCC
T ss_pred             hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccC
Confidence            87652  579999999997531    335678899999999999999999988887665432   456677777788888


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----------HHHHHHHhhCCCCCC-CCCH
Q 041276          144 NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----------EKFLEEVKCRTPMER-PGEP  212 (251)
Q Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~  212 (251)
                      +.+..|+++|+|+.+|+|++++|++++|||||+|+||+++|++...+...          +...+.+..+.|+++ +.+|
T Consensus       155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p  234 (268)
T d2h7ma1         155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDA  234 (268)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCC
T ss_pred             cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCH
Confidence            89999999999999999999999999999999999999999976433211          233445556788876 8999


Q ss_pred             HHHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          213 KEVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       213 ~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      +|+|+.+.||+|+.++++|||+|.||||++...
T Consensus       235 ~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~~  267 (268)
T d2h7ma1         235 TPVAKTVCALLSDWLPATTGDIIYADGGAHTQL  267 (268)
T ss_dssp             HHHHHHHHHHHSSSCTTCCSEEEEESTTGGGCC
T ss_pred             HHHHHHHHHHhCchhcCccCCEEEECcCccccc
Confidence            999999999999999999999999999997653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.7e-37  Score=250.57  Aligned_cols=213  Identities=27%  Similarity=0.433  Sum_probs=162.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-------eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-------VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTT   90 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~   90 (251)
                      ||||||||++|||     .++++.|.+.|.++...       .+|+.+.+..+....++..+..+++|++++|||+... 
T Consensus         2 kVvlITGas~GIG-----~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~-   75 (257)
T d1fjha_           2 SIIVISGCATGIG-----AATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ-   75 (257)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT-
T ss_pred             CEEEEeCCCCHHH-----HHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc-
Confidence            8999999999999     89999999999887654       3688888888888777766654679999999997642 


Q ss_pred             CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccc---------------------------cCC
Q 041276           91 KPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGV---------------------------LST  143 (251)
Q Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~---------------------------~~~  143 (251)
                             .+.+.....+|+.+...+.+...+.+.+.......++++....                           .+.
T Consensus        76 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~  148 (257)
T d1fjha_          76 -------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             -------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC
Confidence                   1336788899999999999999999988766666666553322                           111


Q ss_pred             -CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhh-CCCCCCCCCHHHHHHHHHH
Q 041276          144 -NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKC-RTPMERPGEPKEVSSLVAF  221 (251)
Q Consensus       144 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~  221 (251)
                       ++...|++||+|+.+|+|++|.|++++|||||+|+||+++||+.+....+++..+.... ..|++|+++|+|||+.+.|
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~f  228 (257)
T d1fjha_         149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAF  228 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHH
T ss_pred             CcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence             22346999999999999999999999999999999999999998877666555554444 4699999999999999999


Q ss_pred             HcCCCCCCccccEEEeCCCccc
Q 041276          222 LCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      |+|++++++|||+|.||||++.
T Consensus       229 L~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         229 LMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             HTSGGGTTCCSCEEEESTTHHH
T ss_pred             HhCchhCCccCceEEeCCCccc
Confidence            9999999999999999999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-36  Score=244.16  Aligned_cols=203  Identities=19%  Similarity=0.217  Sum_probs=160.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhc-----------------------CCeeEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTK-----------------------CFKVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~-----------------------~~~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ++.|+|||||||+|||     .++++++.+.                       +.++.++.+|+++.++++++++++.+
T Consensus         1 M~~KtilITGassGIG-----~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIG-----LGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHH-----HHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHH-----HHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            3569999999999999     4444443322                       34677889999999999999999999


Q ss_pred             hcC-CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-----------CceEEEeccccc
Q 041276           72 LFN-GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-----------AGNIILVSSVCG  139 (251)
Q Consensus        72 ~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-----------~g~iv~vss~~~  139 (251)
                      .++ .++|+||||||+..+..+..+.+.++|++.+++|+.+++.+++.++|+|++++           .++++++++...
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            872 24999999999876567788999999999999999999999999999998642           378999888766


Q ss_pred             ccCC-------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCH
Q 041276          140 VLST-------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEP  212 (251)
Q Consensus       140 ~~~~-------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (251)
                      ....       .+..+|++||+|+.+|+++|+.|++++||+||+|+||+++|+|....                 ...+|
T Consensus       156 ~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~  218 (250)
T d1yo6a1         156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALTV  218 (250)
T ss_dssp             CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred             cccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-----------------CCCCH
Confidence            5433       23457999999999999999999999999999999999999986432                 12368


Q ss_pred             HHHHHHHHHHcCCCCCCccccEEEeCC
Q 041276          213 KEVSSLVAFLCMPAASYITGQTICVDG  239 (251)
Q Consensus       213 ~dva~~~~~l~~~~~~~~~G~~i~vdg  239 (251)
                      ++.++.++..+.......+|+.+..||
T Consensus       219 e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         219 EQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            999999999998767778999888775

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-37  Score=246.67  Aligned_cols=203  Identities=16%  Similarity=0.189  Sum_probs=169.4

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE--------------eccCCCHHHHHHHHHHHHH--hcCCCccEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS--------------VCDASSRAEREKLMKQVSS--LFNGKLNIL   80 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~--------------~~D~~~~~~~~~~~~~i~~--~~~~~id~l   80 (251)
                      +++||||||++|||     .++++.+.+.|.++..+              .+|+.+.+......+.+..  .+ ++||+|
T Consensus         2 ~gkVlITGas~GIG-----~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALG-----SAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQG-SQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHH-----HHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTT-CCEEEE
T ss_pred             CCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcC-CCeeEE
Confidence            45679999999999     89999999888766543              4566666676666666655  34 789999


Q ss_pred             EEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHH
Q 041276           81 INNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLA  160 (251)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~  160 (251)
                      |||||......+..+.+.+.|+.++++|+++++.++++++|+|++.  |+||++||.++..+.+++..|++||+|+.+|+
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~  153 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLT  153 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHH
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHHHHHH
Confidence            9999987645566677788999999999999999999999999754  89999999999999999999999999999999


Q ss_pred             HHHHHHHc--cCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHH-HcCCCCCCccccEEEe
Q 041276          161 KNLACEWA--RDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAF-LCMPAASYITGQTICV  237 (251)
Q Consensus       161 ~~la~e~~--~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~-l~~~~~~~~~G~~i~v  237 (251)
                      ++|+.|++  +.+|+||.|+||+++|++.+...+.          .+..++.+|+++++.+++ +.++..+++||+.|.|
T Consensus       154 ~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         154 SSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence            99999998  5799999999999999886544332          233456789999999875 5556778899999998

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-35  Score=240.10  Aligned_cols=197  Identities=24%  Similarity=0.251  Sum_probs=170.9

Q ss_pred             CCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLG-------------------NEAELNECLREWKT-KCFKVTGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        15 l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      |+||+|||||||+|||                   +.++++++.+++.. .+..+..+.+|+++.+.+..+++.+...+ 
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence            8999999999999999                   66777777777654 36678889999999999999999999999 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHH
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKG  154 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~  154 (251)
                      +.+|+++||||... ..++.+.+.++|++++++|+.+++.+++.++|+|+++ .|+||++||.++..+.+....|++||+
T Consensus        91 g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          91 GGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             TSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             CCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHH
Confidence            89999999999876 7778889999999999999999999999999999865 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcc--CCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcC
Q 041276          155 AMNQLAKNLACEWAR--DNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       155 a~~~~~~~la~e~~~--~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  224 (251)
                      |+.+|+++|+.|+++  .||+||+|+||+++|+|.......          .+.....+|+++|+.++....
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----------IVHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----------GGGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccC----------CccccCCCHHHHHHHHHHHhh
Confidence            999999999999974  579999999999999986433221          111223578999998877553

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.95  E-value=5e-28  Score=195.00  Aligned_cols=205  Identities=18%  Similarity=0.140  Sum_probs=157.4

Q ss_pred             CCEEEEecCCCCcC-----------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           17 GMTALVTGGTKGLG-----------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        17 ~k~vlItGas~giG-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      ++++|||||++|||                       +.+..+++.+++...+.++.++.+|++|.++++++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            47999999999999                       123456677777777889999999999999999999998665 


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATK  153 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK  153 (251)
                       +++|.++||+|... ..++.+.+.++|+..+++|+.+.+.+.+.    +...+.++||++||+++..+.++...|+++|
T Consensus        88 -~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~----~~~~~~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1          88 -VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHEL----TRELDLTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             -SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHH----HTTSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             -cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHH----hhccCCceEeeecchhhccCCcccHHHHHHH
Confidence             58999999999987 77889999999999999999999988765    4666778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      ++++.|++.++    ..|+++++|+||++.++....    ....+.+. + ..-...+|+++++.+..++....  ....
T Consensus       162 a~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~----~~~~~~~~-~-~G~~~~~~~~~~~~l~~~l~~~~--~~~~  229 (259)
T d2fr1a1         162 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAE----GPVADRFR-R-HGVIEMPPETACRALQNALDRAE--VCPI  229 (259)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECCBC----------------CT-T-TTEECBCHHHHHHHHHHHHHTTC--SSCE
T ss_pred             HhHHHHHHHHH----hCCCCEEECCCCcccCCcccc----chHHHHHH-h-cCCCCCCHHHHHHHHHHHHhCCC--ceEE
Confidence            99988776554    469999999999887653321    11111111 1 11134589999999988885432  3344


Q ss_pred             EEEeCCC
Q 041276          234 TICVDGG  240 (251)
Q Consensus       234 ~i~vdgG  240 (251)
                      ++.+|..
T Consensus       230 v~~~d~~  236 (259)
T d2fr1a1         230 VIDVRWD  236 (259)
T ss_dssp             ECEECHH
T ss_pred             EEeCcHH
Confidence            5566643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=3.3e-16  Score=130.73  Aligned_cols=203  Identities=12%  Similarity=0.018  Sum_probs=140.2

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----------------------------eeEEEeccCCCHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCF-----------------------------KVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~D~~~~~~~~~~~~   67 (251)
                      .|+||||||||-||     ..+++.|.+.+.                             ++.++.+|++|.++++++++
T Consensus         1 ~K~vLITGatGfiG-----s~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (357)
T d1db3a_           1 SKVALITGVTGQDG-----SYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILR   75 (357)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHH-----HHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHh
Confidence            48999999999999     566666555432                             45667899999999999987


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----  142 (251)
                      .+      ++|+++|+|+.......     .++....+++|+.++.++++++...-. .+..++|++||...+..     
T Consensus        76 ~~------~~d~v~h~aa~~~~~~~-----~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~  143 (357)
T d1db3a_          76 EV------QPDEVYNLGAMSHVAVS-----FESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIP  143 (357)
T ss_dssp             HH------CCSEEEECCCCCTTTTT-----TSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSS
T ss_pred             cc------CCCEEEEeecccccchh-----hhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCC
Confidence            63      79999999998652222     233456789999999999988743221 22357999998654311     


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHH---hh-CCC-----CC
Q 041276          143 ------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEV---KC-RTP-----ME  207 (251)
Q Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~---~~-~~~-----~~  207 (251)
                            ..+...|+.||.+.+.+++.+++.   +++++..+.|+.+.+|..............+   .. ..+     .+
T Consensus       144 ~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~  220 (357)
T d1db3a_         144 QKETTPFYPRSPYAVAKLYAYWITVNYRES---YGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM  220 (357)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCC
Confidence                  123567999999999999998876   4688889999999888543322222222211   11 111     01


Q ss_pred             ----CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          208 ----RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       208 ----~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                          .+..++|+++++..++...    .|+.+.+..|..+
T Consensus       221 ~~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         221 DSLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             TCEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             CeeecceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence                2456999999998777432    4677787776654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.64  E-value=2e-15  Score=126.11  Aligned_cols=204  Identities=14%  Similarity=0.088  Sum_probs=146.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++||||||+|-||     ..+++.|.+.+.                         ++.++.+|++|++.+.++++.    
T Consensus         1 MkILItG~tGfIG-----s~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~----   71 (361)
T d1kewa_           1 MKILITGGAGFIG-----SAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ----   71 (361)
T ss_dssp             CEEEEESTTSHHH-----HHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHh----
Confidence            3689999999999     777777765543                         345678899999999998875    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCceEEEecccccccC-----
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-----GAGNIILVSSVCGVLS-----  142 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~g~iv~vss~~~~~~-----  142 (251)
                        .++|+|||+|+... .    ..+.++....+++|+.++.++.+.+.......     +..++|++||...+..     
T Consensus        72 --~~~d~VihlAa~~~-~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (361)
T d1kewa_          72 --YQPDAVMHLAAESH-V----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             --HCCSEEEECCSCCC-H----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             --CCCCEEEECccccc-h----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCC
Confidence              27999999998643 1    11223346789999999999999987765432     2358999999775521     


Q ss_pred             ----------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCC
Q 041276          143 ----------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPM  206 (251)
Q Consensus       143 ----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  206 (251)
                                      ..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+..|....-..-+.+........|.
T Consensus       145 ~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~---~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~  221 (361)
T d1kewa_         145 EVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT---YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPL  221 (361)
T ss_dssp             GSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCE
T ss_pred             ccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCc
Confidence                            112356999999999999999876   4788999999999887543311123444444444332


Q ss_pred             C---------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          207 E---------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       207 ~---------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      .         .+...+|+|+++..++....   .|..++|..|...
T Consensus       222 ~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         222 PIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             EEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             EEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence            1         13568999999988885432   3678888777644

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=2e-14  Score=121.17  Aligned_cols=188  Identities=11%  Similarity=0.061  Sum_probs=130.7

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-----------------------------------------eEEEecc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFK-----------------------------------------VTGSVCD   55 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~D   55 (251)
                      ||+||||||+|-||     ..++++|.+.|.+                                         +.++.+|
T Consensus         1 g~kILVTGatGfiG-----~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D   75 (393)
T d1i24a_           1 GSRVMVIGGDGYCG-----WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   75 (393)
T ss_dssp             -CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCEEEEECCCcHHH-----HHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEcc
Confidence            78999999999999     7777777665544                                         4567899


Q ss_pred             CCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEe
Q 041276           56 ASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILV  134 (251)
Q Consensus        56 ~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~v  134 (251)
                      ++|.+.++++++..      ++|+|+|.|+...  ......+.+.....+++|+.++.++++.+    ++.+. .++++.
T Consensus        76 l~d~~~l~~~~~~~------~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~  143 (393)
T d1i24a_          76 ICDFEFLAESFKSF------EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKL  143 (393)
T ss_dssp             TTSHHHHHHHHHHH------CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEE
T ss_pred             CCCHHHHHHHHHhh------cchheeccccccc--cccccccccccccccccccccccHHHHHH----HHhccccceeec
Confidence            99999999998763      7999999998753  22234556777889999999999999887    43332 356666


Q ss_pred             cccccccC------------------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC
Q 041276          135 SSVCGVLS------------------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY  190 (251)
Q Consensus       135 ss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~  190 (251)
                      ||......                        ..+...|+.||.+.+.+++.++.+   +++++..+.|+.+..+.....
T Consensus       144 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~G~~~~~~  220 (393)
T d1i24a_         144 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVKTDET  220 (393)
T ss_dssp             CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSCCTTG
T ss_pred             cccccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeecccccccCCCcccc
Confidence            66544321                        122346999999999999988776   578888899888877643211


Q ss_pred             C---------------CC--HHHHHHHhhCCCCC---------CCCCHHHHHHHHHHHcC
Q 041276          191 L---------------SD--EKFLEEVKCRTPME---------RPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       191 ~---------------~~--~~~~~~~~~~~~~~---------~~~~~~dva~~~~~l~~  224 (251)
                      .               ..  ..+........|..         .+...+|++++++.++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~  280 (393)
T d1i24a_         221 EMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIA  280 (393)
T ss_dssp             GGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHH
Confidence            0               00  22233333222211         23458999999988884

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=6e-14  Score=115.88  Aligned_cols=205  Identities=13%  Similarity=0.069  Sum_probs=139.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ++||||||+|-||     ..+++.|.+.+.                         ++.++.+|++|.+.+.++++.    
T Consensus         1 MKiLItG~tGfIG-----~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~----   71 (338)
T d1udca_           1 MRVLVTGGSGYIG-----SHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----   71 (338)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc----
Confidence            3599999999999     666666654433                         456778999999999998875    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC---------
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST---------  143 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~---------  143 (251)
                        .++|+|||+|+... .    ..+.++..+.+++|+.++.++++++    ++.+..++|++||.+.+.+.         
T Consensus        72 --~~~d~ViHlAa~~~-~----~~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~  140 (338)
T d1udca_          72 --HAIDTVIHFAGLKA-V----GESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESF  140 (338)
T ss_dssp             --TTCSEEEECCSCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred             --cCCCEEEECCCccc-h----hhHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEcccccccccccc
Confidence              47999999999643 1    1223345688999999999998887    44455689999987765432         


Q ss_pred             ---CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC------C----HHHHHHHhhC-CCC---
Q 041276          144 ---NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS------D----EKFLEEVKCR-TPM---  206 (251)
Q Consensus       144 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~------~----~~~~~~~~~~-~~~---  206 (251)
                         .+...|+.+|.+.+.+++....+  ..++.+..+.|+.+-++.......      .    +.+....... .+.   
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~  218 (338)
T d1udca_         141 PTGTPQSPYGKSKLMVEQILTDLQKA--QPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF  218 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH--STTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEE
T ss_pred             ccCCCcchHHHHHhhhhHHHHHHHhh--ccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEe
Confidence               23567999999999999877766  347888888888887764332111      1    1122212111 110   


Q ss_pred             ------------CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          207 ------------ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       207 ------------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                                  ..+...+|++.++..+.........++.+++.++..++
T Consensus       219 g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  268 (338)
T d1udca_         219 GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             CSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred             CCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence                        11345788987776655433444567888898877654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.55  E-value=6e-14  Score=115.08  Aligned_cols=199  Identities=16%  Similarity=0.162  Sum_probs=142.8

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcC------------------------------CeeEEEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKC------------------------------FKVTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~------------------------------~~~~~~~~D~~~~~~~~~~~~   67 (251)
                      ++||||||+|-||     ..+++.|.+.+                              .++.++..|.++........ 
T Consensus         1 MkIlItG~tGfIG-----~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-   74 (322)
T d1r6da_           1 MRLLVTGGAGFIG-----SHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-   74 (322)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-
Confidence            3699999999999     77777775543                              24667888998888766544 


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST----  143 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~----  143 (251)
                             ..+|.++|+|+....     ..........+++|+.++..+++++    ++.+..++|++||...+.+.    
T Consensus        75 -------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~  138 (322)
T d1r6da_          75 -------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGS  138 (322)
T ss_dssp             -------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSC
T ss_pred             -------cccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCC
Confidence                   579999999987541     2223445667889999999998887    45556789999998765432    


Q ss_pred             -------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC---------
Q 041276          144 -------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME---------  207 (251)
Q Consensus       144 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------  207 (251)
                             .+...|+.+|.+.+.+++.++++   +|+++..+.|+.+..|....-..-..+........+..         
T Consensus       139 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r  215 (322)
T d1r6da_         139 WTESSPLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR  215 (322)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEE
Confidence                   23458999999999999999877   47899999999998875432211233344443333321         


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          208 RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+...+|+|+++..++....   .|+.+.+..|..+.
T Consensus       216 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         216 EWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             EEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             ccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence            23468999999999986433   47888888776654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=6.2e-14  Score=114.46  Aligned_cols=150  Identities=11%  Similarity=0.040  Sum_probs=116.8

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE----eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS----VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKP   92 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~----~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~   92 (251)
                      .|+||||||+|-||     ..+++.|.+.+..+...    .+|+.+.+.++.+++.      .++|.++|+|+... .. 
T Consensus         2 kkkIlITG~tGfiG-----~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~------~~~d~v~~~a~~~~-~~-   68 (315)
T d1e6ua_           2 KQRVFIAGHRGMVG-----SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFAS------ERIDQVYLAAAKVG-GI-   68 (315)
T ss_dssp             CEEEEEETTTSHHH-----HHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHH------HCCSEEEECCCCCC-CH-
T ss_pred             CCEEEEEcCCcHHH-----HHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhh------cCCCEEEEcchhcc-cc-
Confidence            47899999999999     99999999888766554    5788899998888764      47999999997653 11 


Q ss_pred             CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC----------------CChhhHHhHHHH
Q 041276           93 TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN----------------LGTIYAATKGAM  156 (251)
Q Consensus        93 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~----------------~~~~Y~~sK~a~  156 (251)
                        ........+.+++|+.++.++++++    ++.+..++|++||.+.+.+..                ....|+.||.+.
T Consensus        69 --~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          69 --VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             --HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             --ccchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence              1223445566888999999988876    555556899999988764321                124699999999


Q ss_pred             HHHHHHHHHHHccCCeEEEEEecCcccCCCCC
Q 041276          157 NQLAKNLACEWARDNIRINSVAPWFITTPLTE  188 (251)
Q Consensus       157 ~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~  188 (251)
                      +.+++.+.++   +|+++..+.|+.+..|...
T Consensus       143 E~~~~~~~~~---~gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         143 IKLCESYNRQ---YGRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             HHHHHHHHHH---HCCEEEEEEECEEESTTCC
T ss_pred             HHHHHHHHHH---hCCCEEEEeeccEECCCCC
Confidence            9999999877   4789999999999887543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.5e-14  Score=118.39  Aligned_cols=204  Identities=12%  Similarity=0.069  Sum_probs=133.9

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC-CCHHHHHHHHH----------HHHHhcCCCccEEEEcccC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA-SSRAEREKLMK----------QVSSLFNGKLNILINNVGT   86 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~----------~i~~~~~~~id~lv~~ag~   86 (251)
                      |+||||||+|-||     ..+++.|.+.+.++..+.-.. ...+.......          .+...+ .++|+|||+|+.
T Consensus         2 KKIlVtG~sGfiG-----~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVG-----SHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY-IEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCC-CCCSEEEECCSC
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHH-cCCCEEEECccc
Confidence            8899999999999     899999988888776652111 11111111110          011122 479999999996


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC----------------CCCChhhH
Q 041276           87 NYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS----------------TNLGTIYA  150 (251)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~----------------~~~~~~Y~  150 (251)
                      .. ... ..   ++..+.+++|+.++.++++++    ++.+ -++|++||.+.+..                ..+...|+
T Consensus        76 ~~-~~~-~~---~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~  145 (312)
T d2b69a1          76 AS-PPN-YM---YNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD  145 (312)
T ss_dssp             CS-HHH-HT---TCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH
T ss_pred             CC-chh-HH---hCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHH
Confidence            54 111 11   233567889999999999876    4434 48999998655532                12346799


Q ss_pred             HhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC--HHHHHHHhhCCCC---------CCCCCHHHHHHHH
Q 041276          151 ATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD--EKFLEEVKCRTPM---------ERPGEPKEVSSLV  219 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~dva~~~  219 (251)
                      .||.+.+.+++.++++   +|+++..+.|+.+..|........  +.+........+.         ..+...+|+++++
T Consensus       146 ~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~  222 (312)
T d2b69a1         146 EGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  222 (312)
T ss_dssp             HHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---hCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHH
Confidence            9999999999998887   478899999999998765432211  2333333332221         1244689999999


Q ss_pred             HHHcCCCCCCccccEEEeCCCcccc
Q 041276          220 AFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       220 ~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      ..++...    .+..+.+.+|..+.
T Consensus       223 ~~~~~~~----~~~~~n~~~~~~~~  243 (312)
T d2b69a1         223 VALMNSN----VSSPVNLGNPEEHT  243 (312)
T ss_dssp             HHHHTSS----CCSCEEESCCCEEE
T ss_pred             HHHHhhc----cCCceEecCCcccc
Confidence            8888432    24467887776654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.53  E-value=5.6e-13  Score=110.01  Aligned_cols=203  Identities=12%  Similarity=0.018  Sum_probs=141.3

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE-----------------------------EeccCCCHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG-----------------------------SVCDASSRAEREKL   65 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~D~~~~~~~~~~   65 (251)
                      ...|++|||||||.||     ..++++|.+.|.++..                             +..|..|.......
T Consensus        14 ~~~k~iLVTG~tGfIG-----s~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~   88 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIG-----SNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA   88 (341)
T ss_dssp             HSCCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEecCCCHHH-----HHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc
Confidence            4569999999999999     8888888777665543                             45677666655544


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--
Q 041276           66 MKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--  143 (251)
Q Consensus        66 ~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--  143 (251)
                      .        ..++.++|.+....     .....++....+++|+.++..+.+++    ++.+..++|++||...+...  
T Consensus        89 ~--------~~~~~v~~~~a~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~  151 (341)
T d1sb8a_          89 C--------AGVDYVLHQAALGS-----VPRSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPG  151 (341)
T ss_dssp             H--------TTCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCC
T ss_pred             c--------cccccccccccccc-----ccccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCC
Confidence            4        57888998887543     12235667789999999999999887    55555699999998765422  


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC----HHHHHHHhhCCCC----
Q 041276          144 ---------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD----EKFLEEVKCRTPM----  206 (251)
Q Consensus       144 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~----  206 (251)
                               .+...|+.+|.+.+.+++.+++.   .++++..+.|+.+.++....-...    ...........|.    
T Consensus       152 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g  228 (341)
T d1sb8a_         152 LPKVEDTIGKPLSPYAVTKYVNELYADVFSRC---YGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING  228 (341)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCccCCCCCCCCCcchHHHHHHHHHHHHHHHH---hCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcC
Confidence                     23468999999999999988876   368888899988877754332211    2233333333222    


Q ss_pred             -----CCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccc
Q 041276          207 -----ERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       207 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                           ..+..++|++.++..++..... ..|+.+.+..+..+
T Consensus       229 ~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         229 DGETSRDFCYIENTVQANLLAATAGLD-ARNQVYNIAVGGRT  269 (341)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCCE
T ss_pred             CCCEEEEEEEEeccchhhhhhhhcccc-ccceeeeecccccc
Confidence                 2355679999998887754332 45777877765543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.51  E-value=1.7e-16  Score=121.06  Aligned_cols=135  Identities=11%  Similarity=0.020  Sum_probs=91.5

Q ss_pred             ccCCCCCEEEEecCCCCcC-------------------cHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHh
Q 041276           12 RWSLQGMTALVTGGTKGLG-------------------NEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSL   72 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   72 (251)
                      ..+|+||+||||||++|||                   +.++++++.+.+.... ++....+|+++.+++++++      
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh------
Confidence            5689999999999999999                   5566666666665542 3456789999998888775      


Q ss_pred             cCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-CCChhhHH
Q 041276           73 FNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-NLGTIYAA  151 (251)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~~~~Y~~  151 (251)
                        +++|+||||||...     ...+.+.|++.+++|+.+.+++...+.+.+.... .....+++.....+. .+...|++
T Consensus        91 --~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~  162 (191)
T d1luaa1          91 --KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKL  162 (191)
T ss_dssp             --TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHH
T ss_pred             --cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHH
Confidence              68999999999643     3568899999999998777765544332222211 122222222221111 12346999


Q ss_pred             hHHHHHHHHH
Q 041276          152 TKGAMNQLAK  161 (251)
Q Consensus       152 sK~a~~~~~~  161 (251)
                      +|+++..|++
T Consensus       163 sk~a~~~l~~  172 (191)
T d1luaa1         163 HRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHHh
Confidence            9999988764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.51  E-value=3.4e-13  Score=110.95  Aligned_cols=190  Identities=14%  Similarity=-0.007  Sum_probs=131.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE------------------------------EEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVT------------------------------GSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~------------------------------~~~~D~~~~~~~~~~~~   67 (251)
                      |+||||||||-||     ..+.+.|.+.|.+|.                              ++..|+++.+++.+.++
T Consensus         2 k~~LVTGatGfiG-----~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~   76 (339)
T d1n7ha_           2 KIALITGITGQDG-----SYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWID   76 (339)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCccHHH-----HHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHh
Confidence            8999999999999     888888877665544                              45689999999988887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEecccccccC----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSVCGVLS----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~~~~~~----  142 (251)
                      .      .++|+|+|+|+....     ....+.....++.|+.+...+..++.....+.. ..+++..||......    
T Consensus        77 ~------~~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~  145 (339)
T d1n7ha_          77 V------IKPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP  145 (339)
T ss_dssp             H------HCCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS
T ss_pred             h------hccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCC
Confidence            5      379999999997541     122345567889999999999888866554432 345555555433222    


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHH----HHHhhCCCC------
Q 041276          143 ------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFL----EEVKCRTPM------  206 (251)
Q Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~----~~~~~~~~~------  206 (251)
                            ..+...|+.+|.+.+.++..+.+.   +++.+..+.|+.+..|............    .......+.      
T Consensus       146 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~  222 (339)
T d1n7ha_         146 QSETTPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNL  222 (339)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCC
Confidence                  223568999999999999988876   4789999999998887644322111111    111111111      


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCC
Q 041276          207 ---ERPGEPKEVSSLVAFLCMPA  226 (251)
Q Consensus       207 ---~~~~~~~dva~~~~~l~~~~  226 (251)
                         ..+..++|+|+++..++...
T Consensus       223 ~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         223 QASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CccccceeeehHHHHHHHHHhcC
Confidence               12456899999998888644

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.51  E-value=4.2e-13  Score=110.87  Aligned_cols=197  Identities=15%  Similarity=0.146  Sum_probs=126.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE--------------------------eccCCCHHHHHHHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS--------------------------VCDASSRAEREKLMKQV   69 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~--------------------------~~D~~~~~~~~~~~~~i   69 (251)
                      .||+||||||+|-||     ..++++|.++|.+++..                          ..|+++.+++..++   
T Consensus        10 ~gk~VlVTG~sGfIG-----s~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVA-----SHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI---   81 (342)
T ss_dssp             TTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT---
T ss_pred             CcCEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc---
Confidence            489999999999999     77788877777666543                          34555555444433   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCceEEEecccccccCC-----
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-GAGNIILVSSVCGVLST-----  143 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~g~iv~vss~~~~~~~-----  143 (251)
                           ..+|.++|+++... .    ..+.   ...+..|+.++.++++.+    .+. +..++|++||..+....     
T Consensus        82 -----~~~~~v~~~a~~~~-~----~~~~---~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~  144 (342)
T d1y1pa1          82 -----KGAAGVAHIASVVS-F----SNKY---DEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             -----TTCSEEEECCCCCS-C----CSCH---HHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCC
T ss_pred             -----ccchhhhhhccccc-c----cccc---cccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCC
Confidence                 46899999998653 1    1222   455678999998888876    333 35789999997543211     


Q ss_pred             --------------------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---H
Q 041276          144 --------------------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---E  194 (251)
Q Consensus       144 --------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~  194 (251)
                                                .....|+.+|.+.+.+++.++++.. .++++..++|+.+-.|...+....   .
T Consensus       145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~  223 (342)
T d1y1pa1         145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchH
Confidence                                      1123699999999999999888754 468888899988877754332222   1


Q ss_pred             HHHHHHhhC--------CCCCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          195 KFLEEVKCR--------TPMERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       195 ~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                      .+.......        .+...+..++|+|++++..+..  ....|+.....++
T Consensus       224 ~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~~  275 (342)
T d1y1pa1         224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcCC
Confidence            222222111        1111245689999997766532  2235666554443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=4.1e-13  Score=111.12  Aligned_cols=148  Identities=17%  Similarity=0.136  Sum_probs=109.1

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------------eEEEeccCCCHHHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFK-------------------------VTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------------~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      .|+||||||+|-||     ..+.++|.+.+.+                         +.++.+|++|.+.++.++..   
T Consensus         1 ~K~ILVTGatGfIG-----~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---   72 (347)
T d1z45a2           1 SKIVLVTGGAGYIG-----SHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---   72 (347)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHH-----HHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc---
Confidence            48999999999999     6677776665443                         44567899999999998865   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---------  142 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---------  142 (251)
                         -++|+|+|+|+... .    ....+.-.....+|+.++..+++++    ++.+..++|++||...+..         
T Consensus        73 ---~~~d~VihlAa~~~-~----~~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~  140 (347)
T d1z45a2          73 ---YKIDSVIHFAGLKA-V----GESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIP  140 (347)
T ss_dssp             ---SCCCEEEECCSCCC-H----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             ---cCCCEEEEcccccc-c----cccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCc
Confidence               47999999999754 1    1122334667889999999999887    4445568999999665531         


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCC
Q 041276          143 ------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTP  185 (251)
Q Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~  185 (251)
                            ..+...|+.||.+.+.+++.+.... ..++.+..+.|+.+-.+
T Consensus       141 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         141 IPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence                  1234579999999999998887653 34677777777666544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.1e-12  Score=108.42  Aligned_cols=205  Identities=13%  Similarity=0.074  Sum_probs=139.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-------------------------------eEEEeccCCCHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK-------------------------------VTGSVCDASSRAEREKLM   66 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~D~~~~~~~~~~~   66 (251)
                      |+||||||+|-||     ..+.++|.+.+.+                               +.++.+|++|.+.+.+++
T Consensus         3 kKILITG~tGfIG-----s~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   77 (346)
T d1ek6a_           3 EKVLVTGGAGYIG-----SHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLF   77 (346)
T ss_dssp             SEEEEETTTSHHH-----HHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHH
T ss_pred             CeEEEECCCcHHH-----HHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccc
Confidence            7899999999999     6777776554443                               456789999999998888


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC---
Q 041276           67 KQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST---  143 (251)
Q Consensus        67 ~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~---  143 (251)
                      ..      ..+++++|+|+....     ....+.....+++|+.++.++.+++    ++.+..+++++||...+...   
T Consensus        78 ~~------~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~  142 (346)
T d1ek6a_          78 KK------YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYL  142 (346)
T ss_dssp             HH------CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSS
T ss_pred             cc------cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccc
Confidence            65      589999999997541     1222334567899999999888876    55666689998887655432   


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC-------CC---HHHHHHHhh-C
Q 041276          144 ---------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL-------SD---EKFLEEVKC-R  203 (251)
Q Consensus       144 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~-------~~---~~~~~~~~~-~  203 (251)
                               .....|+.+|.+.+..++.++..  ..++....+.|+.+.++-.....       ..   +........ .
T Consensus       143 ~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (346)
T d1ek6a_         143 PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRR  220 (346)
T ss_dssp             SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSS
T ss_pred             cccccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCC
Confidence                     23447999999999888877653  45777888888777665322111       11   111121111 1


Q ss_pred             CC---------------CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcccc
Q 041276          204 TP---------------MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVN  244 (251)
Q Consensus       204 ~~---------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~  244 (251)
                      .+               ...+..++|+|.++..+.........++.+++.+|..++
T Consensus       221 ~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         221 EALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             SCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             CcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence            11               112567999999887775444444568888898887654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=1.7e-12  Score=107.92  Aligned_cols=202  Identities=13%  Similarity=0.057  Sum_probs=140.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE------------------EeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG------------------SVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~------------------~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ++++||||||+|-||     ..+++.|.+.+.++..                  ...|+.+.+.+.+++        .++
T Consensus        14 ~nMKILVTGgsGfIG-----s~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIA-----SHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT--------EGV   80 (363)
T ss_dssp             SCCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH--------TTC
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHh--------hcC
Confidence            678899999999999     8889998888776654                  346676666665544        479


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--------------
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--------------  143 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--------------  143 (251)
                      |.++|+|+... ..   ....+.....+..|+.++..++.++    ++.+..++|++||...+...              
T Consensus        81 d~Vih~a~~~~-~~---~~~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          81 DHVFNLAADMG-GM---GFIQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             SEEEECCCCCC-CH---HHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             CeEeecccccc-cc---cccccccccccccccchhhHHHHhH----HhhCcccccccccccccccccccccccccccccc
Confidence            99999998765 21   1112335667888999998888886    55666789999997765421              


Q ss_pred             ----CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC-----HHHHHHHhhCCC---------
Q 041276          144 ----NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD-----EKFLEEVKCRTP---------  205 (251)
Q Consensus       144 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~---------  205 (251)
                          .+...|+.+|.+.+.+++.+..+   .|+++..+.|+.+..+........     ...........+         
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~---~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCe
Confidence                22457999999999999988876   478899999998887754322111     111111111111         


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCccccc
Q 041276          206 MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFTVNG  245 (251)
Q Consensus       206 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~~~~  245 (251)
                      ...+...+|+++.+..++...    .|+.+.+.+|..++-
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~  265 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  265 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             EEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccH
Confidence            223567899999999888532    466788888776543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.5e-13  Score=111.32  Aligned_cols=188  Identities=12%  Similarity=-0.034  Sum_probs=129.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------------------eEEEeccCCCHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK------------------------------VTGSVCDASSRAEREKLMK   67 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------------------~~~~~~D~~~~~~~~~~~~   67 (251)
                      |++|||||+|-||     ..+.+.|.+.|.+                              +.++.+|++|++.+.+++.
T Consensus         2 KI~LVTG~tGfIG-----~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   76 (347)
T d1t2aa_           2 NVALITGITGQDG-----SYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIIN   76 (347)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEecCCcHHH-----HHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHh
Confidence            4559999999999     8888887766544                              3567789999999999987


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----
Q 041276           68 QVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----  142 (251)
Q Consensus        68 ~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----  142 (251)
                      .      .++++++|+++... .    ....+.....+++|+.++.++++++..+-.. +..++|++||.+.+..     
T Consensus        77 ~------~~~~~v~~~~a~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~  144 (347)
T d1t2aa_          77 E------VKPTEIYNLGAQSH-V----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIP  144 (347)
T ss_dssp             H------HCCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSS
T ss_pred             h------cccceeeeeeeccc-c----chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCC
Confidence            6      37899999988653 1    1223444567899999999998887443222 2258999998764321     


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHH----HHHHHhhCCCC------
Q 041276          143 ------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEK----FLEEVKCRTPM------  206 (251)
Q Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~----~~~~~~~~~~~------  206 (251)
                            ..+...|+.||.+.+.+++.+++.   +++.+..+.|+.+..|-.........    .........+.      
T Consensus       145 ~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g  221 (347)
T d1t2aa_         145 QKETTPFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL  221 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCC
Confidence                  123457999999999999988776   47888888998887774332221111    11222222211      


Q ss_pred             ---CCCCCHHHHHHHHHHHcCC
Q 041276          207 ---ERPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       207 ---~~~~~~~dva~~~~~l~~~  225 (251)
                         ..+..++|+++++..++..
T Consensus       222 ~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         222 DAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             TCEECCEEHHHHHHHHHHHHHS
T ss_pred             cceeeeeEecHHHHHHHHHhhc
Confidence               1345789999999888854

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.48  E-value=8.2e-13  Score=109.23  Aligned_cols=196  Identities=16%  Similarity=0.066  Sum_probs=131.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-------------------------eeEEEeccCCCHHHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCF-------------------------KVTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~-------------------------~~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      -|.||||||||-||     ..+++.|.+.+.                         ++.++.+|++|.+.+..++     
T Consensus         2 ~mkILVTGgtGfIG-----s~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~-----   71 (346)
T d1oc2a_           2 FKNIIVTGGAGFIG-----SNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA-----   71 (346)
T ss_dssp             CSEEEEETTTSHHH-----HHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH-----
T ss_pred             cCEEEEeCCCcHHH-----HHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHH-----
Confidence            48899999999999     777777765542                         3456779999999998887     


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---------  142 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---------  142 (251)
                         ...|.++|.|+.....     ....+....+++|+.++.+++..+    ++.+ .++|++||...+..         
T Consensus        72 ---~~~~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~----~~~~-~k~i~~ss~~vyg~~~~~~~~~~  138 (346)
T d1oc2a_          72 ---AKADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAA----RKYD-IRFHHVSTDEVYGDLPLREDLPG  138 (346)
T ss_dssp             ---TTCSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHH----HHHT-CEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             ---hhhhhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhh----cccc-ccccccccceEecccCccccccc
Confidence               4688899999876411     112234567899999999998876    3333 46787777654421         


Q ss_pred             --------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC-
Q 041276          143 --------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME-  207 (251)
Q Consensus       143 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-  207 (251)
                                    ..+...|+.+|.+.+.+++.+.++   .++++..+.|+.+..|..........+........+.. 
T Consensus       139 ~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i  215 (346)
T d1oc2a_         139 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKL  215 (346)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEE
T ss_pred             cccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeE
Confidence                          112356999999999999988876   48999999999988874322111122222222222211 


Q ss_pred             --------CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          208 --------RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       208 --------~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                              .+...+|+|++++.++....   .|..+.+.+|-
T Consensus       216 ~~~g~~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~~  254 (346)
T d1oc2a_         216 YGEGKNVRDWIHTNDHSTGVWAILTKGR---MGETYLIGADG  254 (346)
T ss_dssp             ETTSCCEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCSC
T ss_pred             eCCCCccccccchhhHHHHHHHHHhhcc---cCccccccccc
Confidence                    24568999999988774332   24455554443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.8e-12  Score=98.22  Aligned_cols=180  Identities=13%  Similarity=0.082  Sum_probs=115.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------eEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFK------------------VTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ..|+|+||||||.||     ..+++++.+++.+                  +.++.+|++|.+++.+++        .+.
T Consensus         2 ~~kkIlV~GatG~iG-----~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al--------~~~   68 (205)
T d1hdoa_           2 AVKKIAIFGATGQTG-----LTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV--------AGQ   68 (205)
T ss_dssp             CCCEEEEESTTSHHH-----HHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHH--------TTC
T ss_pred             CCCEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHh--------cCC
Confidence            568899999999999     8888887766544                  445689999999988877        578


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCC----hhhHHhH
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLG----TIYAATK  153 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~----~~Y~~sK  153 (251)
                      |+||+++|......+   .         +++..+..+    +++.+++.+..++|++||.......+..    ..|...|
T Consensus        69 d~vi~~~g~~~~~~~---~---------~~~~~~~~~----l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~  132 (205)
T d1hdoa_          69 DAVIVLLGTRNDLSP---T---------TVMSEGARN----IVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH  132 (205)
T ss_dssp             SEEEECCCCTTCCSC---C---------CHHHHHHHH----HHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred             CEEEEEeccCCchhh---h---------hhhHHHHHH----HHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHH
Confidence            999999997542211   1         122333333    3445677777899999987665443322    2455555


Q ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCCcccc
Q 041276          154 GAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASYITGQ  233 (251)
Q Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (251)
                      .+.+.+       +...+++...|.||.+..........   .   .........+.+.+|+|+.++..+.+.  ...|+
T Consensus       133 ~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~---~---~~~~~~~~~~i~~~DvA~~~~~~l~~~--~~~g~  197 (205)
T d1hdoa_         133 IRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYT---V---TLDGRGPSRVISKHDLGHFMLRCLTTD--EYDGH  197 (205)
T ss_dssp             HHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCE---E---ESSSCSSCSEEEHHHHHHHHHHTTSCS--TTTTC
T ss_pred             HHHHHH-------HHhcCCceEEEecceecCCCCcccEE---E---eeCCCCCCCcCCHHHHHHHHHHHhCCC--CCCCE
Confidence            544433       33468999999999875432211100   0   001112223468999999999988543  25588


Q ss_pred             EEEeCC
Q 041276          234 TICVDG  239 (251)
Q Consensus       234 ~i~vdg  239 (251)
                      .+.+.+
T Consensus       198 ~~~~s~  203 (205)
T d1hdoa_         198 STYPSH  203 (205)
T ss_dssp             EEEEEC
T ss_pred             EEecCC
Confidence            887643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.47  E-value=2.2e-12  Score=108.04  Aligned_cols=150  Identities=15%  Similarity=0.100  Sum_probs=111.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHh-cCCe-----------------------------------------eEEEec
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKT-KCFK-----------------------------------------VTGSVC   54 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~-~~~~-----------------------------------------~~~~~~   54 (251)
                      +++||||||+|-||     ..+.++|.+ .+.+                                         +.++..
T Consensus         2 ~MKVLITG~tGfIG-----s~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (383)
T d1gy8a_           2 HMRVLVCGGAGYIG-----SHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG   76 (383)
T ss_dssp             CCEEEEETTTSHHH-----HHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES
T ss_pred             cCEEEEeCCCcHHH-----HHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEEC
Confidence            56899999999999     677766643 2333                                         445688


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEe
Q 041276           55 DASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV  134 (251)
Q Consensus        55 D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~v  134 (251)
                      |++|.+.++++++..     .++|+|+|+|+... .    ....+.....+++|+.++..++.++    ++.+..+++++
T Consensus        77 Di~d~~~l~~~~~~~-----~~~d~ViH~Aa~~~-~----~~~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~  142 (383)
T d1gy8a_          77 DVRNEDFLNGVFTRH-----GPIDAVVHMCAFLA-V----GESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFS  142 (383)
T ss_dssp             CTTCHHHHHHHHHHS-----CCCCEEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEE
T ss_pred             cccCHHHhhhhhhcc-----ceeehhhccccccc-c----cccccccccccccccccccccchhh----hccCCcccccc
Confidence            999999999888653     67999999999764 1    1223345667889999999988886    55555678777


Q ss_pred             cccccccC------------------CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCC
Q 041276          135 SSVCGVLS------------------TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTE  188 (251)
Q Consensus       135 ss~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~  188 (251)
                      ++......                  ..+...|+.+|.+.+.+++.+...   +|+.+..+.|+.+..|...
T Consensus       143 ~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             EEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTT
T ss_pred             cccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCcc
Confidence            76554421                  123467999999999999988776   5788999999888777554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=9.7e-13  Score=108.49  Aligned_cols=198  Identities=12%  Similarity=0.089  Sum_probs=134.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC--------------------eeEEEeccCCCHHHHHHHHHHHHHhcCCCc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF--------------------KVTGSVCDASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      ++||||||||-||     ..+++.|.+.+.                    ++.++.+|+++.+++.+.+.       .++
T Consensus         1 MKILITG~tGfiG-----~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~-------~~~   68 (342)
T d2blla1           1 MRVLILGVNGFIG-----NHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV-------KKC   68 (342)
T ss_dssp             CEEEEETCSSHHH-----HHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH-------HHC
T ss_pred             CEEEEECCCcHHH-----HHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH-------hCC
Confidence            3699999999999     777777765542                    24467889988766555332       359


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC--------------
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST--------------  143 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~--------------  143 (251)
                      |+|+|+|+....     ....+.....+++|+.++.++++++    .+.+ -+++++||...+...              
T Consensus        69 d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~  138 (342)
T d2blla1          69 DVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (342)
T ss_dssp             SEEEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             Cccccccccccc-----cccccCCcccccccccccccccccc----cccc-ccccccccccccccccccccccccccccc
Confidence            999999997641     1122334567999999999999886    4443 466677765544321              


Q ss_pred             ----CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCC-----C---HHHHHHHhhCCC------
Q 041276          144 ----NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLS-----D---EKFLEEVKCRTP------  205 (251)
Q Consensus       144 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~-----~---~~~~~~~~~~~~------  205 (251)
                          .+...|+.||.+.+.+++.+++.   .|+++..+.|..+..+.......     .   ..+........+      
T Consensus       139 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  215 (342)
T d2blla1         139 GPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (342)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             cccCCCcchhhhcccchhhhhhhhhcc---cCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCC
Confidence                12357999999999999988877   47888888888887764433221     1   222233222222      


Q ss_pred             ---CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCC
Q 041276          206 ---MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGG  240 (251)
Q Consensus       206 ---~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG  240 (251)
                         ...+...+|+++++..++........|+.+.+.+|
T Consensus       216 g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             CCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence               11256799999999999876544556899988544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.42  E-value=1.5e-12  Score=106.79  Aligned_cols=199  Identities=15%  Similarity=0.125  Sum_probs=128.4

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCee------------------------EEEeccCCCHHHHHHHHHHHHHhcC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKV------------------------TGSVCDASSRAEREKLMKQVSSLFN   74 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~------------------------~~~~~D~~~~~~~~~~~~~i~~~~~   74 (251)
                      +||||||+|-||     ..+.+.|.+.+.++                        .++.+|+++.+++.++++..     
T Consensus         2 KILVTGatGfIG-----s~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----   71 (338)
T d1orra_           2 KLLITGGCGFLG-----SNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----   71 (338)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCcHHH-----HHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----
Confidence            589999999999     77777777666544                        45679999999999988753     


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------  143 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  143 (251)
                       ++|+|||+|+....     ....++....+++|+.++.++++++    .+.+..++++.+|.....+.           
T Consensus        72 -~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~  141 (338)
T d1orra_          72 -MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETET  141 (338)
T ss_dssp             -CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSS
T ss_pred             -CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhh----hcccccccccccccccccccccccccccccc
Confidence             79999999987641     1123345788999999999999876    44444566666665543322           


Q ss_pred             -----------------CCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHHHHhh-
Q 041276          144 -----------------NLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLEEVKC-  202 (251)
Q Consensus       144 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~-  202 (251)
                                       .....|+.+|...+.+.......+   ++....+.|..+..+........   ..+...... 
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (338)
T d1orra_         142 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEI  218 (338)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHH
T ss_pred             cccccccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHH
Confidence                             134679999999999998888775   44444444433332222111111   122222111 


Q ss_pred             ----CCC---------CCCCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCc
Q 041276          203 ----RTP---------MERPGEPKEVSSLVAFLCMPAASYITGQTICVDGGF  241 (251)
Q Consensus       203 ----~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~  241 (251)
                          ..+         ...+...+|++++++.++... ...+|+.+.+.+|.
T Consensus       219 ~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~  269 (338)
T d1orra_         219 KNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTI  269 (338)
T ss_dssp             HTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCG
T ss_pred             HhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCccccccccc
Confidence                111         112345899999998877432 23578888876654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.42  E-value=2.3e-12  Score=105.10  Aligned_cols=197  Identities=12%  Similarity=0.034  Sum_probs=130.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe------------------------eEEEeccCCCHHHHHHHHHHHHHhc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK------------------------VTGSVCDASSRAEREKLMKQVSSLF   73 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~------------------------~~~~~~D~~~~~~~~~~~~~i~~~~   73 (251)
                      |+||||||+|.||     ..+.+.|.+.|.+                        +.++.+|++|.+.+.+.+..     
T Consensus         1 k~vLItG~tGfiG-----~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   70 (321)
T d1rpna_           1 RSALVTGITGQDG-----AYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIK-----   70 (321)
T ss_dssp             CEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcc-----
Confidence            7899999999999     7777777665533                        45678899999998888876     


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-ceEEEecccccccC----------
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGA-GNIILVSSVCGVLS----------  142 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-g~iv~vss~~~~~~----------  142 (251)
                       ...++++++++... ..    ...+.....+..|+.++..++.++    ++.+. .++++.|+.. ..+          
T Consensus        71 -~~~~~~~~~a~~~~-~~----~~~~~~~~~~~~n~~g~~~~l~~~----~~~~~~~~~i~~Ss~~-~~~~~~~~~~~E~  139 (321)
T d1rpna_          71 -AQPQEVYNLAAQSF-VG----ASWNQPVTTGVVDGLGVTHLLEAI----RQFSPETRFYQASTSE-MFGLIQAERQDEN  139 (321)
T ss_dssp             -HCCSEEEECCSCCC-HH----HHTTSHHHHHHHHTHHHHHHHHHH----HHHCTTSEEEEEEEGG-GGCSCSSSSBCTT
T ss_pred             -cccccccccccccc-cc----ccccchHHHHhhhhhchHHHHHHH----HHhCCCcccccccchh-hcCcccCCCCCCC
Confidence             36888888887654 11    111234677889999999988877    33332 3555555543 332          


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHH---HHHH-hhCCCC---C------
Q 041276          143 --TNLGTIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKF---LEEV-KCRTPM---E------  207 (251)
Q Consensus       143 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~---~~~~-~~~~~~---~------  207 (251)
                        ......|+.+|.+.+.+++.++.+   +++++..+.|+.+..|....-......   .... ....+.   +      
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r  216 (321)
T d1rpna_         140 TPFYPRSPYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR  216 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEE
T ss_pred             CCccccChhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEE
Confidence              123468999999999999988877   468888888888877754322111111   1111 111111   1      


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccccEEEeCCCcc
Q 041276          208 RPGEPKEVSSLVAFLCMPAASYITGQTICVDGGFT  242 (251)
Q Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~vdgG~~  242 (251)
                      .+...+|+|+++..++....    +..+.+.+|..
T Consensus       217 ~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         217 DWGFAGDYVEAMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             ECEEHHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             ccEEeHHHHHHHHHHHhcCC----cCCceeccccc
Confidence            24578999999999885432    33456666543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.32  E-value=1e-11  Score=96.67  Aligned_cols=199  Identities=13%  Similarity=0.057  Sum_probs=122.6

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCee-------------------EEEeccCCCHHHHHHHHHHHHHhcCCCcc
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKV-------------------TGSVCDASSRAEREKLMKQVSSLFNGKLN   78 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~-------------------~~~~~D~~~~~~~~~~~~~i~~~~~~~id   78 (251)
                      ++||||||+|.||     ..+++.|.+.+..+                   .++.+|+++.+.+.+++        ..+|
T Consensus         4 ~tVlVtGatG~iG-----~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d   70 (252)
T d2q46a1           4 PTVLVTGASGRTG-----QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF--------QGID   70 (252)
T ss_dssp             CEEEEESTTSTTH-----HHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHH--------TTCS
T ss_pred             CEEEEECCccHHH-----HHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeecccccccccc--------ccce
Confidence            7999999999999     78888877665432                   34568888888887776        5799


Q ss_pred             EEEEcccCCCCCCC--------CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           79 ILINNVGTNYTTKP--------TVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        79 ~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      .++|+++.......        ..............+|+.+...+....    .....+...+.++.....+......+.
T Consensus        71 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~~~  146 (252)
T d2q46a1          71 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLNKLG  146 (252)
T ss_dssp             EEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGGGGG
T ss_pred             eeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCCccccccc
Confidence            99999986531111        111112234556678888887776655    334457788888776665544433333


Q ss_pred             HhHH-HHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 041276          151 ATKG-AMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPMERPGEPKEVSSLVAFLCMPAASY  229 (251)
Q Consensus       151 ~sK~-a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (251)
                      .++. ........+.   ...|+++..++|+.+..+................  .....+.+++|+|++++.++..+  .
T Consensus       147 ~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~a~~~~l~~~--~  219 (252)
T d2q46a1         147 NGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELL--QTDTKTVPRADVAEVCIQALLFE--E  219 (252)
T ss_dssp             GCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSCTTSSCEEEESTTGGG--GSSCCEEEHHHHHHHHHHHTTCG--G
T ss_pred             ccchhhhhhhhhhhh---hcccccceeecceEEECCCcchhhhhhccCcccc--cCCCCeEEHHHHHHHHHHHhCCc--c
Confidence            3322 2222222222   2468999999999998775432210000000000  01123457899999999988543  3


Q ss_pred             ccccEEEeCCC
Q 041276          230 ITGQTICVDGG  240 (251)
Q Consensus       230 ~~G~~i~vdgG  240 (251)
                      ..|+.+++-++
T Consensus       220 ~~g~~~~i~~~  230 (252)
T d2q46a1         220 AKNKAFDLGSK  230 (252)
T ss_dssp             GTTEEEEEEEC
T ss_pred             ccCcEEEEeeC
Confidence            56889888653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=2.5e-11  Score=94.67  Aligned_cols=181  Identities=18%  Similarity=0.165  Sum_probs=119.1

Q ss_pred             cccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC--eeEEE------------------eccCCCHHHHHHHHHHHH
Q 041276           11 DRWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF--KVTGS------------------VCDASSRAEREKLMKQVS   70 (251)
Q Consensus        11 ~~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~--~~~~~------------------~~D~~~~~~~~~~~~~i~   70 (251)
                      +.+.+.+|+||||||||.||     ..+.+++.+.+.  ++..+                  .+|+.+.+++.       
T Consensus         8 ~~~~m~~k~IlItGaTG~iG-----~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~-------   75 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETG-----RVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA-------   75 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHH-----HHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGG-------
T ss_pred             HHhCCCCCEEEEECCCcHHH-----HHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccc-------
Confidence            34557889999999999999     888888877652  44433                  34444443332       


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhH
Q 041276           71 SLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYA  150 (251)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~  150 (251)
                      +.+ ...|.++|++|...        .........++|+..+..+++.+    ++.+..++|++|+.......  ...|+
T Consensus        76 ~~~-~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~~--~~~Y~  140 (232)
T d2bkaa1          76 SAF-QGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKSS--NFLYL  140 (232)
T ss_dssp             GGG-SSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTTC--SSHHH
T ss_pred             ccc-cccccccccccccc--------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccCc--cchhH
Confidence            333 67999999998542        13345566788999998888876    55666789999998775443  45699


Q ss_pred             HhHHHHHHHHHHHHHHHccCCe-EEEEEecCcccCCCCCCCCCCHHHHHHHhhCCCCC----CCCCHHHHHHHHHHHcCC
Q 041276          151 ATKGAMNQLAKNLACEWARDNI-RINSVAPWFITTPLTEPYLSDEKFLEEVKCRTPME----RPGEPKEVSSLVAFLCMP  225 (251)
Q Consensus       151 ~sK~a~~~~~~~la~e~~~~~i-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~dva~~~~~l~~~  225 (251)
                      .+|...+...+.       .+. ++..+.||.+..+..... ..+.....+....+..    ...+++|+|++++..+..
T Consensus       141 ~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~  212 (232)
T d2bkaa1         141 QVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR  212 (232)
T ss_dssp             HHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHhhhcccc-------ccccceEEecCceeecCCCcCc-HHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhc
Confidence            999877765432       243 467789999988754321 1122233333332222    234579999998888754


Q ss_pred             C
Q 041276          226 A  226 (251)
Q Consensus       226 ~  226 (251)
                      .
T Consensus       213 ~  213 (232)
T d2bkaa1         213 P  213 (232)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.21  E-value=1.2e-10  Score=95.96  Aligned_cols=191  Identities=13%  Similarity=0.034  Sum_probs=127.3

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-----------------------eEEEeccCCCHHHHHHHHHHHHH
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-----------------------VTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-----------------------~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      +++|+||||||||-||     ..+++.|.+.|.+                       +.++.+|++|++.+.++++.   
T Consensus         6 ~~~KkILVTG~tGfIG-----s~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~---   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKG-----GWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE---   77 (356)
T ss_dssp             HTTCEEEEETTTSHHH-----HHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh---
Confidence            5789999999999999     7888888776544                       44556799999998888875   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC---------
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS---------  142 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~---------  142 (251)
                         ..+|+++|+|+....     ..+.+.....+.+|+.++..+++++...   .....+++.|+......         
T Consensus        78 ---~~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~  146 (356)
T d1rkxa_          78 ---FQPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRE  146 (356)
T ss_dssp             ---HCCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCT
T ss_pred             ---chhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhcc---cccccccccccccccccccccccccc
Confidence               379999999986541     1223456778899999999988887331   22234555554433321         


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHHc------cCCeEEEEEecCcccCCCCCCCCC-CHHHHHHHhhCCCC------
Q 041276          143 ---TNLGTIYAATKGAMNQLAKNLACEWA------RDNIRINSVAPWFITTPLTEPYLS-DEKFLEEVKCRTPM------  206 (251)
Q Consensus       143 ---~~~~~~Y~~sK~a~~~~~~~la~e~~------~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~------  206 (251)
                         ..+...|+.+|.+.+.+++.++.++.      .+++.+..+.|+.+..|-...... ...+........+.      
T Consensus       147 ~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~  226 (356)
T d1rkxa_         147 NEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPH  226 (356)
T ss_dssp             TSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTT
T ss_pred             ccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecc
Confidence               12345799999999999998888753      347888889898887764322111 12223333222221      


Q ss_pred             --CCCCCHHHHHHHHHHHcC
Q 041276          207 --ERPGEPKEVSSLVAFLCM  224 (251)
Q Consensus       207 --~~~~~~~dva~~~~~l~~  224 (251)
                        ..+...+|++.++..++.
T Consensus       227 ~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         227 AIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             CEECCEETHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhhhhh
Confidence              112347899998776664

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.12  E-value=4.7e-11  Score=91.63  Aligned_cols=174  Identities=16%  Similarity=0.153  Sum_probs=111.3

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE-------------eccCCCHHHHHHHHHHHHHhcCCCccEEEEc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS-------------VCDASSRAEREKLMKQVSSLFNGKLNILINN   83 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~-------------~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~   83 (251)
                      .|+||||||||.||     ..+++++.+.+..+.++             ..+..|..++       .....+.+|.++++
T Consensus         2 ~KkIlItGatG~iG-----~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~-------~~~~~~~~d~vi~~   69 (212)
T d2a35a1           2 PKRVLLAGATGLTG-----EHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAEL-------LPQLDGSIDTAFCC   69 (212)
T ss_dssp             CCEEEEECTTSHHH-----HHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHH-------GGGCCSCCSEEEEC
T ss_pred             CCEEEEECCCcHHH-----HHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhh-------hhccccchheeeee
Confidence            48999999999999     89999998887533222             2334444332       22222579999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHH
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNL  163 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (251)
                      +|.....       ...-....++|+.++..+++++    ++.+..+++++||..+...  ....|..+|...+...+  
T Consensus        70 ~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E~~l~--  134 (212)
T d2a35a1          70 LGTTIKE-------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGELEQALQ--  134 (212)
T ss_dssp             CCCCHHH-------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHT--
T ss_pred             eeeeccc-------cccccccccchhhhhhhccccc----ccccccccccccccccccc--cccchhHHHHHHhhhcc--
Confidence            9865311       1112456788999998888876    6666678999998776533  35679999977665443  


Q ss_pred             HHHHccCCe-EEEEEecCcccCCCCCCCCCCHHHHHHHhhC---CCCC--CCCCHHHHHHHHHHHcCCCC
Q 041276          164 ACEWARDNI-RINSVAPWFITTPLTEPYLSDEKFLEEVKCR---TPME--RPGEPKEVSSLVAFLCMPAA  227 (251)
Q Consensus       164 a~e~~~~~i-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~dva~~~~~l~~~~~  227 (251)
                           ..+. ++..+.|+.+..+.......     ..+...   ...+  ++...+|+|++++.++..+.
T Consensus       135 -----~~~~~~~~I~Rp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         135 -----EQGWPQLTIARPSLLFGPREEFRLA-----EILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             -----TSCCSEEEEEECCSEESTTSCEEGG-----GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             -----ccccccceeeCCcceeCCcccccHH-----HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence                 2343 57788899997765432100     000000   0001  12457899999999986544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.95  E-value=2e-08  Score=79.45  Aligned_cols=192  Identities=18%  Similarity=0.160  Sum_probs=122.4

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE---eccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS---VCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTV   94 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~   94 (251)
                      ++||||||||.||     ..+.+.|...|.++..+   .+|++|.++++++++..      ++|+|+|+++... .    
T Consensus         2 MKIlItGasGfiG-----~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~------~~d~vih~a~~~~-~----   65 (281)
T d1vl0a_           2 MKILITGANGQLG-----REIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK------KPNVVINCAAHTA-V----   65 (281)
T ss_dssp             EEEEEESTTSHHH-----HHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH------CCSEEEECCCCCC-H----
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHc------CCCEEEeeccccc-c----
Confidence            4699999999999     99999999988777665   35789999998888753      7999999998654 1    


Q ss_pred             CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEeccccccc-----------CCCCChhhHHhHHHHHHHHHHH
Q 041276           95 EYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVL-----------STNLGTIYAATKGAMNQLAKNL  163 (251)
Q Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~l  163 (251)
                      +.........+..|+.....+....    +... ..+++.||.....           +..+...|+.+|...+.+++. 
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~----~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~-  139 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAA----YSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA-  139 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHH----HHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-
T ss_pred             ccccccchhhccccccccccccccc----cccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH-
Confidence            1223334566777777776666554    2222 3555555543221           123445788888877766542 


Q ss_pred             HHHHccCCeEEEEEecCcccCCCCCCCCCCHHHHHHHhhCCC-------CCCCCCHHHHHHHHHHHcCCCCCCccccEEE
Q 041276          164 ACEWARDNIRINSVAPWFITTPLTEPYLSDEKFLEEVKCRTP-------MERPGEPKEVSSLVAFLCMPAASYITGQTIC  236 (251)
Q Consensus       164 a~e~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  236 (251)
                            .+.+...+.|+.+..+....   ...+........+       ...+...+|+++++..++....   +| .+.
T Consensus       140 ------~~~~~~i~R~~~vyG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~---~g-~~~  206 (281)
T d1vl0a_         140 ------LNPKYYIVRTAWLYGDGNNF---VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN---YG-TFH  206 (281)
T ss_dssp             ------HCSSEEEEEECSEESSSSCH---HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC---CE-EEE
T ss_pred             ------hCCCccccceeEEeCCCccc---ccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc---cC-cee
Confidence                  24567778899987764321   1222222222211       1134578999999999885432   35 555


Q ss_pred             eCCCcccc
Q 041276          237 VDGGFTVN  244 (251)
Q Consensus       237 vdgG~~~~  244 (251)
                      +.+|-.++
T Consensus       207 ~~~~~~~s  214 (281)
T d1vl0a_         207 CTCKGICS  214 (281)
T ss_dssp             CCCBSCEE
T ss_pred             EeCCCccc
Confidence            55554443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.94  E-value=2.2e-09  Score=85.70  Aligned_cols=123  Identities=16%  Similarity=0.130  Sum_probs=87.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE------EeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTG------SVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTK   91 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~------~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~   91 (251)
                      ++||||||+|-||     ..+.+.|.+.+..+..      +..|++|.+.++++++..      ++|+|||+||... ..
T Consensus         1 MKILItG~tGfiG-----~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~------~~D~Vih~Aa~~~-~~   68 (298)
T d1n2sa_           1 MNILLFGKTGQVG-----WELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKL------RPDVIVNAAAHTA-VD   68 (298)
T ss_dssp             CEEEEECTTSHHH-----HHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHH------CCSEEEECCCCCC-HH
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHc------CCCEEEEeccccc-cc
Confidence            3699999999999     8888888877643322      247999999998888753      7999999999764 11


Q ss_pred             CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccC-----------CCCChhhHHhHHHHHHHH
Q 041276           92 PTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLS-----------TNLGTIYAATKGAMNQLA  160 (251)
Q Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~Y~~sK~a~~~~~  160 (251)
                      .. .   +.-...+++|+.++..+.+++    ++. ..+++++||...+..           ..+...|+.+|.+.+.+.
T Consensus        69 ~~-~---~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_          69 KA-E---SEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             HH-T---TCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             cc-c---cCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhH
Confidence            11 1   223567788999998888875    333 367888777654432           123457999998877665


Q ss_pred             H
Q 041276          161 K  161 (251)
Q Consensus       161 ~  161 (251)
                      +
T Consensus       140 ~  140 (298)
T d1n2sa_         140 Q  140 (298)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.70  E-value=4.2e-08  Score=78.51  Aligned_cols=181  Identities=10%  Similarity=0.014  Sum_probs=99.2

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCe--------------------------eEEEeccCCCHHHHHHHHHHHHH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFK--------------------------VTGSVCDASSRAEREKLMKQVSS   71 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~--------------------------~~~~~~D~~~~~~~~~~~~~i~~   71 (251)
                      ++||||||||.||     ..++++|.+.|.+                          +.++.+|++|.+.+.+.+     
T Consensus         4 ~KILVtGatG~iG-----~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~-----   73 (312)
T d1qyda_           4 SRVLIVGGTGYIG-----KRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL-----   73 (312)
T ss_dssp             CCEEEESTTSTTH-----HHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH-----
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc-----
Confidence            5699999999999     6777776666544                          445567888888877766     


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----CCC
Q 041276           72 LFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----NLG  146 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----~~~  146 (251)
                         ...+.++++++.....                .|..+...++.++    .+....++++.||.......     ...
T Consensus        74 ---~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~  130 (312)
T d1qyda_          74 ---KQVDVVISALAGGVLS----------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPG  130 (312)
T ss_dssp             ---TTCSEEEECCCCSSSS----------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSST
T ss_pred             ---cCcchhhhhhhhcccc----------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchh
Confidence               4688888888754311                1222233333332    44555677777775433222     223


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCC--------CCHHHHHHHhhCCCCCCCCCHHHHHHH
Q 041276          147 TIYAATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYL--------SDEKFLEEVKCRTPMERPGEPKEVSSL  218 (251)
Q Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~  218 (251)
                      ..|..+|.....+    ..   ..++....+.|+.+..+......        ..... ..+........+...+|+|++
T Consensus       131 ~~~~~~~~~~~~~----~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~i~v~Dva~a  202 (312)
T d1qyda_         131 SITFIDKRKVRRA----IE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKV-LIYGDGNVKGIWVDEDDVGTY  202 (312)
T ss_dssp             THHHHHHHHHHHH----HH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEE-CCBTTSCSEEEEECHHHHHHH
T ss_pred             hhhhHHHHHHHHh----hc---ccccceEEeccceeecCCccchhhHHHHhhhccccc-ccccccccccceeeHHHHHHH
Confidence            3455555444332    22   35677777888777543221110        00000 000000011124678999999


Q ss_pred             HHHHcCCCCCCccccEE-EeCCCc
Q 041276          219 VAFLCMPAASYITGQTI-CVDGGF  241 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i-~vdgG~  241 (251)
                      ++.++...  ...|+.+ .+.++.
T Consensus       203 ~~~~l~~~--~~~~~~~~~~~~~~  224 (312)
T d1qyda_         203 TIKSIDDP--QTLNKTMYIRPPMN  224 (312)
T ss_dssp             HHHHTTCG--GGSSSEEECCCGGG
T ss_pred             HHHHhcCc--cccCceEEEeCCCc
Confidence            99888542  2344444 444444

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.49  E-value=4.2e-07  Score=72.27  Aligned_cols=199  Identities=13%  Similarity=0.164  Sum_probs=116.5

Q ss_pred             EEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEe-------------ccCCCHHHHHHHHHHHHH--hcCCCccEEEEc
Q 041276           20 ALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSV-------------CDASSRAEREKLMKQVSS--LFNGKLNILINN   83 (251)
Q Consensus        20 vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~-------------~D~~~~~~~~~~~~~i~~--~~~~~id~lv~~   83 (251)
                      ||||||+|-||     ..+.++|.+.|. .+..+.             .++.+....+...+.+..  .+ ..+++++|.
T Consensus         2 ILITGgsGfIG-----s~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIG-----SNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEF-GDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHH-----HHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCC-SSCCEEEEC
T ss_pred             EEEecCccHHH-----HHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcc-cchhhhhhh
Confidence            89999999999     899999998874 455541             111111112233333332  22 568899998


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC-----------CCChhhHHh
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST-----------NLGTIYAAT  152 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~Y~~s  152 (251)
                      |+.....    ...   .....+.|+.+...+.+++    ++.+. ++++.||.....+.           .....|+.+
T Consensus        76 aa~~~~~----~~~---~~~~~~~~~~~~~~~l~~~----~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~  143 (307)
T d1eq2a_          76 GACSSTT----EWD---GKYMMDNNYQYSKELLHYC----LEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYS  143 (307)
T ss_dssp             CSCCCTT----CCC---HHHHHHHTHHHHHHHHHHH----HHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHH
T ss_pred             ccccccc----ccc---ccccccccccccccccccc----ccccc-cccccccccccccccccccccccccccccccccc
Confidence            8754311    122   2445677777777777665    33332 35555554443321           345689999


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCC--CCC--HHHHHHHhhC----------CCCCCCCCHHHHHHH
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPY--LSD--EKFLEEVKCR----------TPMERPGEPKEVSSL  218 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~--~~~--~~~~~~~~~~----------~~~~~~~~~~dva~~  218 (251)
                      |.+.+.+++.+..+   .++.+..+.|..+..|.....  ...  ..+...+...          .....+..++|++++
T Consensus       144 K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~  220 (307)
T d1eq2a_         144 KFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (307)
T ss_dssp             HHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             cchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHH
Confidence            99999999877655   577888888887777643211  111  1122222211          111134568899999


Q ss_pred             HHHHcCCCCCCccccEEEeCCCccc
Q 041276          219 VAFLCMPAASYITGQTICVDGGFTV  243 (251)
Q Consensus       219 ~~~l~~~~~~~~~G~~i~vdgG~~~  243 (251)
                      +..++....    ...+.+.+|...
T Consensus       221 ~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         221 NLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             HHHHHHHCC----CEEEEESCSCCB
T ss_pred             HHHHhhhcc----ccccccccccch
Confidence            988775322    335667666544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.48  E-value=1.2e-07  Score=75.23  Aligned_cols=185  Identities=10%  Similarity=0.008  Sum_probs=96.7

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeE---------------------------EEeccCCCHHHHHHHHHHH
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVT---------------------------GSVCDASSRAEREKLMKQV   69 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~---------------------------~~~~D~~~~~~~~~~~~~i   69 (251)
                      .|+||||||||.||     ..+++.|.+.|.++.                           ++..|+.+.....+.+   
T Consensus         3 kkKILVtGatG~iG-----~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---   74 (307)
T d1qyca_           3 RSRILLIGATGYIG-----RHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV---   74 (307)
T ss_dssp             CCCEEEESTTSTTH-----HHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH---
T ss_pred             CCEEEEECCCcHHH-----HHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh---
Confidence            48899999999999     777777766665544                           3445666666655555   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhh
Q 041276           70 SSLFNGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIY  149 (251)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y  149 (251)
                           ...+.++++++...                    ..+...+.++    ++.....++++.||............+
T Consensus        75 -----~~~~~vi~~~~~~~--------------------~~~~~~~~~a----~~~~~~~~~~~~s~~~~~~~~~~~~~~  125 (307)
T d1qyca_          75 -----KNVDVVISTVGSLQ--------------------IESQVNIIKA----IKEVGTVKRFFPSEFGNDVDNVHAVEP  125 (307)
T ss_dssp             -----HTCSEEEECCCGGG--------------------SGGGHHHHHH----HHHHCCCSEEECSCCSSCTTSCCCCTT
T ss_pred             -----hhceeeeecccccc--------------------cchhhHHHHH----HHHhccccceeeecccccccccccccc
Confidence                 25777777776432                    1122222232    344444677777775544433333333


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC------HHHHHHHhhCCCCCCCCCHHHHHHHHHHHc
Q 041276          150 AATKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD------EKFLEEVKCRTPMERPGEPKEVSSLVAFLC  223 (251)
Q Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (251)
                      ...+............   ..++....+.|+.+..+....+...      ...............+...+|+|++++.++
T Consensus       126 ~~~~~~~~~~~~~~~~---~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  202 (307)
T d1qyca_         126 AKSVFEVKAKVRRAIE---AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  202 (307)
T ss_dssp             HHHHHHHHHHHHHHHH---HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             ccccccccccccchhh---ccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHh
Confidence            3333322222222222   2467777788877755432221100      000000000111123467999999999888


Q ss_pred             CCCCCCccccEEE-eCCCccc
Q 041276          224 MPAASYITGQTIC-VDGGFTV  243 (251)
Q Consensus       224 ~~~~~~~~G~~i~-vdgG~~~  243 (251)
                      ....  ..|+.+. +.+|..+
T Consensus       203 ~~~~--~~~~~~~~~~~~~~~  221 (307)
T d1qyca_         203 DDPR--TLNKTLYLRLPANTL  221 (307)
T ss_dssp             SCGG--GTTEEEECCCGGGEE
T ss_pred             cChh--hcCceeEEeCCCCcc
Confidence            5432  2344444 4445544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.43  E-value=3.3e-07  Score=74.85  Aligned_cols=184  Identities=14%  Similarity=0.050  Sum_probs=101.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee---------------------EEEeccCCCHHH-HHHHHHHHHHhc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKV---------------------TGSVCDASSRAE-REKLMKQVSSLF   73 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~---------------------~~~~~D~~~~~~-~~~~~~~i~~~~   73 (251)
                      +.|+|+||||||.||     ..+++.|.+.|.++                     ..+..|+.|..+ ++.++       
T Consensus         2 ~kktIlVtGatG~iG-----~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQG-----ASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHH-----HHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHH-----HHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHh-------
Confidence            469999999999999     77777776665444                     445566666433 33332       


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCC--CChhhHH
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTN--LGTIYAA  151 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~--~~~~Y~~  151 (251)
                       ...|.++.+..... .                .++....+++.++    ++.+..++++.||........  ....|..
T Consensus        70 -~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~  127 (350)
T d1xgka_          70 -EGAHLAFINTTSQA-G----------------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWA  127 (350)
T ss_dssp             -TTCSEEEECCCSTT-S----------------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTH
T ss_pred             -cCCceEEeeccccc-c----------------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhh
Confidence             46777776654322 1                1223333344443    444545778888765544332  2345667


Q ss_pred             hHHHHHHHHHHHHHHHccCCeEEEEEecCcccCCCCCCCCCC---HHHHH-HHhhCCCCC-----CCCC-HHHHHHHHHH
Q 041276          152 TKGAMNQLAKNLACEWARDNIRINSVAPWFITTPLTEPYLSD---EKFLE-EVKCRTPME-----RPGE-PKEVSSLVAF  221 (251)
Q Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~-~~~~~~~~~-----~~~~-~~dva~~~~~  221 (251)
                      +|.....+.+       ..++....+.|+.+..+........   ..... ......|..     .+.+ .+|+++.+..
T Consensus       128 ~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         128 PKFTVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             HHHHHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             hHHHHHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            7766554433       2456777788887655433221110   00000 000001111     0122 4799999988


Q ss_pred             HcCCCCCCccccEEEeCCC
Q 041276          222 LCMPAASYITGQTICVDGG  240 (251)
Q Consensus       222 l~~~~~~~~~G~~i~vdgG  240 (251)
                      ++.+.....+|+.+.+.|.
T Consensus       201 ~l~~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HHHHCHHHHTTCEEEECSE
T ss_pred             HHhCChhhcCCeEEEEeCC
Confidence            8854444467999988764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.53  E-value=0.00013  Score=53.22  Aligned_cols=95  Identities=18%  Similarity=0.231  Sum_probs=55.9

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH------------HHHHHHhcCCCccEEEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKL------------MKQVSSLFNGKLNILIN   82 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~------------~~~i~~~~~~~id~lv~   82 (251)
                      .+|.+|||+||+||.|     ..+.+-.+..|.++......-...+.++++            .+.+....++++|+++.
T Consensus        30 ~~g~~VLI~gaaGGVG-----~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid  104 (176)
T d1xa0a2          30 PERGPVLVTGATGGVG-----SLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVD  104 (176)
T ss_dssp             GGGCCEEESSTTSHHH-----HHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEE
T ss_pred             CCCCEEEEEeccchHH-----HHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEE
Confidence            3589999999999999     666666666666665554332222222211            12222222357999999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      +.|...            |               ...+..|+.  .|+++.++...+....
T Consensus       105 ~vgg~~------------~---------------~~~l~~l~~--~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         105 PVGGRT------------L---------------ATVLSRMRY--GGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             CSTTTT------------H---------------HHHHHTEEE--EEEEEECSCCSSSCCC
T ss_pred             cCCchh------------H---------------HHHHHHhCC--CceEEEeecccCcccC
Confidence            988543            1               223333443  4899999987766544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.42  E-value=2.4e-06  Score=63.42  Aligned_cols=157  Identities=8%  Similarity=-0.007  Sum_probs=85.9

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCC--CCCCCCCC
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY--TTKPTVEY   96 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~--~~~~~~~~   96 (251)
                      +|.|+||+|+||     ..+++.+.+.|+++....   .+++..+++.+++.... ..............  ........
T Consensus         2 ki~vigGaG~iG-----~alA~~la~~G~~V~l~~---R~~e~~~~l~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   72 (212)
T d1jaya_           2 RVALLGGTGNLG-----KGLALRLATLGHEIVVGS---RREEKAEAKAAEYRRIA-GDASITGMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHTTTCEEEEEE---SSHHHHHHHHHHHHHHH-SSCCEEEEEHHHHHHHCSEEEECS
T ss_pred             EEEEEeCCcHHH-----HHHHHHHHHCCCEEEEEE---CCHHHHHHHHHHHHhcC-CCceEEeeccccccchhhhhhhhe
Confidence            577889889999     999999999999988774   46788888888887664 33333322111000  00000111


Q ss_pred             CHHHHHHHHHhhh------------------------HHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHh
Q 041276           97 MAEDLSFLMSTNF------------------------ESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAAT  152 (251)
Q Consensus        97 ~~~~~~~~~~~n~------------------------~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~s  152 (251)
                      ...........+.                        .....+.+...+.+........+++.+.....+......|...
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (212)
T d1jaya_          73 PWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVP  152 (212)
T ss_dssp             CHHHHHHHHHHTHHHHTTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCCCCEEEE
T ss_pred             eeeccchHHHHhhhhhccccccccccccccccccccccccchhhhhhhhhhhhhcccccceeecHHHhcCcccccCccce
Confidence            1111111111111                        1111122333333443332333333333333333444556666


Q ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCcccC
Q 041276          153 KGAMNQLAKNLACEWARDNIRINSVAPWFITT  184 (251)
Q Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~i~pG~v~t  184 (251)
                      +++....++..+.++....+.++.+.||.+.+
T Consensus       153 ~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~  184 (212)
T d1jaya_         153 VCGDDDESKKVVMSLISEIDGLRPLDAGPLSN  184 (212)
T ss_dssp             EEESCHHHHHHHHHHHHHSTTEEEEEEESGGG
T ss_pred             EEeCCHHHHHHHHHHHhhCCCeEEEEeChHHH
Confidence            77777777777777766677788999998764

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.20  E-value=0.0021  Score=46.59  Aligned_cols=31  Identities=32%  Similarity=0.322  Sum_probs=21.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      +|.+|||+||+||+|     ..+.+-.+..|.+++.
T Consensus        29 ~G~~VlV~ga~ggvG-----~~aiqlak~~Ga~vi~   59 (182)
T d1v3va2          29 GGETVLVSAAAGAVG-----SVVGQIAKLKGCKVVG   59 (182)
T ss_dssp             SSCEEEESSTTSHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEeCCCchh-----HHHHHHHHccCCEEEE
Confidence            589999999999999     4455555544544443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0038  Score=44.76  Aligned_cols=29  Identities=24%  Similarity=0.395  Sum_probs=21.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCee
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKV   49 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~   49 (251)
                      .|++|||+||+|++|     ..+.+-.+..|.++
T Consensus        28 ~g~~VlV~Ga~G~vG-----~~aiq~a~~~G~~v   56 (174)
T d1yb5a2          28 AGESVLVHGASGGVG-----LAACQIARAYGLKI   56 (174)
T ss_dssp             TTCEEEEETCSSHHH-----HHHHHHHHHTTCEE
T ss_pred             CCCEEEEEecccccc-----ccccccccccCccc
Confidence            689999999999999     55555555555443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.94  E-value=0.017  Score=40.96  Aligned_cols=65  Identities=20%  Similarity=0.246  Sum_probs=38.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEecc------------------CCCHHHHHHHHHHHHHhcCCCc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCD------------------ASSRAEREKLMKQVSSLFNGKL   77 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D------------------~~~~~~~~~~~~~i~~~~~~~i   77 (251)
                      .|.+|+|+| +|++|     ..+.+-++..|.++..+..+                  -...+......+.+.+..++.+
T Consensus        26 ~g~~vlV~G-~G~vG-----~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIG-----LVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             TTCEEEEEC-CSHHH-----HHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEEc-ccccc-----hhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCC
Confidence            578999997 68999     44455555555444333111                  0111233444555556554579


Q ss_pred             cEEEEcccC
Q 041276           78 NILINNVGT   86 (251)
Q Consensus        78 d~lv~~ag~   86 (251)
                      |++|.++|.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999884

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.0052  Score=37.76  Aligned_cols=43  Identities=19%  Similarity=0.242  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE   63 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   63 (251)
                      ++++|||+||++|+|     ....+-++..+.++......-.+.+-++
T Consensus        31 ~~~~vlI~gasGgVG-----~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVG-----STAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHH-----HHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHH-----HHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            678999999999999     7777777777888877776544444443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.0089  Score=44.75  Aligned_cols=75  Identities=13%  Similarity=0.050  Sum_probs=50.9

Q ss_pred             cCCCCCEEEEecCCCC--------cC---cHHHHHHHHHHHHhcCCeeEEEeccCC----------CHHHHHHHHHHHHH
Q 041276           13 WSLQGMTALVTGGTKG--------LG---NEAELNECLREWKTKCFKVTGSVCDAS----------SRAEREKLMKQVSS   71 (251)
Q Consensus        13 ~~l~~k~vlItGas~g--------iG---~~~~~~~~~~~~~~~~~~~~~~~~D~~----------~~~~~~~~~~~i~~   71 (251)
                      .+|+||.||||+|..-        |+   +..-..++++++...|..+..+..-..          ......++.+.+.+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~   81 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNA   81 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHh
Confidence            4789999999997521        11   223347899999999999988754333          11234444555555


Q ss_pred             hcCCCccEEEEcccCCC
Q 041276           72 LFNGKLNILINNVGTNY   88 (251)
Q Consensus        72 ~~~~~id~lv~~ag~~~   88 (251)
                      .+ ...|++|++|.+..
T Consensus        82 ~~-~~~D~~i~aAAvsD   97 (223)
T d1u7za_          82 SV-QQQNIFIGCAAVAD   97 (223)
T ss_dssp             HG-GGCSEEEECCBCCS
T ss_pred             hh-ccceeEeeeechhh
Confidence            55 67899999999764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.67  E-value=0.0061  Score=43.91  Aligned_cols=15  Identities=33%  Similarity=0.632  Sum_probs=14.0

Q ss_pred             CCCEEEEecCCCCcC
Q 041276           16 QGMTALVTGGTKGLG   30 (251)
Q Consensus        16 ~~k~vlItGas~giG   30 (251)
                      .|++|||+||+|++|
T Consensus        25 ~g~~VlI~ga~g~vG   39 (183)
T d1pqwa_          25 PGERVLIHSATGGVG   39 (183)
T ss_dssp             TTCEEEETTTTSHHH
T ss_pred             CCCEEEEECCCCCcc
Confidence            479999999999999

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.32  E-value=0.022  Score=41.16  Aligned_cols=27  Identities=15%  Similarity=0.047  Sum_probs=19.6

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFK   48 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~   48 (251)
                      +++|||+||+||+|     ..+.+-.+..|.+
T Consensus        31 ~etVLI~gaaGgVG-----~~aiQlak~~Ga~   57 (187)
T d1vj1a2          31 NQTMVVSGAAGACG-----SLAGQIGHLLGCS   57 (187)
T ss_dssp             CCEEEESSTTSTTG-----GGHHHHHHHTTCS
T ss_pred             CCEEEEECCCchhh-----HHHHHHHHHcCCc
Confidence            48999999999999     5555555544443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.0088  Score=42.86  Aligned_cols=15  Identities=20%  Similarity=0.333  Sum_probs=14.1

Q ss_pred             CCCEEEEecCCCCcC
Q 041276           16 QGMTALVTGGTKGLG   30 (251)
Q Consensus        16 ~~k~vlItGas~giG   30 (251)
                      .|++|||+||++++|
T Consensus        28 ~g~~Vlv~ga~g~vG   42 (179)
T d1qora2          28 PDEQFLFHAAAGGVG   42 (179)
T ss_dssp             TTCEEEESSTTBHHH
T ss_pred             CCCEEEEEccccccc
Confidence            479999999999999

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.14  E-value=0.02  Score=40.69  Aligned_cols=33  Identities=18%  Similarity=0.289  Sum_probs=25.1

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      ..|++|||+||+|++|     ..+.+-.+..|.+++..
T Consensus        26 ~~g~~VlI~ga~G~vG-----~~aiqlak~~G~~vi~~   58 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALG-----TAAVQVARAMGLRVLAA   58 (171)
T ss_dssp             CTTCEEEESSTTBHHH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCCEEEEEeccccch-----hhhhhhhcccccccccc
Confidence            3689999999999999     66666666666655443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.31  E-value=0.21  Score=35.53  Aligned_cols=71  Identities=11%  Similarity=0.107  Sum_probs=42.3

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHhcC----------------
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSLFN----------------   74 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~----------------   74 (251)
                      ..++++|+|+|.|+ ||.|     ..++..+...+. .+..+.-+....+....+++++...+.                
T Consensus        13 ~~~l~~k~vlIlGa-GGaa-----rai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   86 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGAS-----TAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE   86 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHH-----HHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhh
Confidence            34689999999998 5666     445555554443 344444444445555555444432220                


Q ss_pred             --CCccEEEEcccCCC
Q 041276           75 --GKLNILINNVGTNY   88 (251)
Q Consensus        75 --~~id~lv~~ag~~~   88 (251)
                        ...|++||+.....
T Consensus        87 ~~~~~diiIN~Tp~G~  102 (182)
T d1vi2a1          87 ALASADILTNGTKVGM  102 (182)
T ss_dssp             HHHTCSEEEECSSTTS
T ss_pred             hhcccceeccccCCcc
Confidence              35799999987543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.19  E-value=0.013  Score=42.57  Aligned_cols=32  Identities=22%  Similarity=0.253  Sum_probs=19.4

Q ss_pred             CCCE-EEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMT-ALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~-vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|.+ ++++||+||+|     ..+.+-.+..|.+++..
T Consensus        28 ~g~~vli~~ga~g~vG-----~~aiqlAk~~Ga~vI~~   60 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVG-----KYASQIGKLLNFNSISV   60 (189)
T ss_dssp             TTTCEEEESCTTSHHH-----HHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEEeCCCchHH-----HHHHHHHhhcCCeEEEE
Confidence            3554 44579999999     45555555555554443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.86  E-value=0.057  Score=38.01  Aligned_cols=26  Identities=31%  Similarity=0.339  Sum_probs=18.7

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      .+.+|+|.|+++++|     ..+.+-++..+
T Consensus        27 ~g~~vlV~G~~G~vG-----~~~~~~~~~~g   52 (170)
T d1jvba2          27 PTKTLLVVGAGGGLG-----TMAVQIAKAVS   52 (170)
T ss_dssp             TTCEEEEETTTSHHH-----HHHHHHHHHHT
T ss_pred             CCCEEEEEeccccce-----eeeeecccccc
Confidence            578999999999999     44444444443

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.08  E-value=0.079  Score=37.31  Aligned_cols=62  Identities=23%  Similarity=0.232  Sum_probs=34.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEE-------------------eccCCCHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGS-------------------VCDASSRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~-------------------~~D~~~~~~~~~~~~~i~~~~~~   75 (251)
                      .|.+|+|.|+ |++|     ..+.+-++..|. ++...                   ..+-.+...   ..+.+...++.
T Consensus        26 ~gd~VlI~G~-G~iG-----~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~---~~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIG-----MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQE---IARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHH---HHHHHHHHHTS
T ss_pred             CCCEEEEECC-CccH-----HHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccccccc---ccccccccCCC
Confidence            5789999986 9999     444444444443 23222                   122223333   33333344435


Q ss_pred             CccEEEEcccC
Q 041276           76 KLNILINNVGT   86 (251)
Q Consensus        76 ~id~lv~~ag~   86 (251)
                      ++|+++.++|.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            78999988884

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.87  E-value=0.38  Score=33.99  Aligned_cols=102  Identities=11%  Similarity=0.050  Sum_probs=56.1

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhc-----CCeeEEEeccCCCH-HHHHHHHHHH-----------------HHhc
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTK-----CFKVTGSVCDASSR-AEREKLMKQV-----------------SSLF   73 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~-~~~~~~~~~i-----------------~~~~   73 (251)
                      .-+|.||||+|.||     ..++-.+...     ...+..+-.|+... +..+.+.-++                 .+.+
T Consensus        24 ~~kV~I~GA~G~Ig-----~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~   98 (175)
T d7mdha1          24 LVNIAVSGAAGMIS-----NHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF   98 (175)
T ss_dssp             CEEEEEETTTSHHH-----HHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred             CcEEEEECCCcHHH-----HHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhc
Confidence            34699999999999     5555555432     12345555665542 2233332222                 2234


Q ss_pred             CCCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-C-CceEEEec
Q 041276           74 NGKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-G-AGNIILVS  135 (251)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~-~g~iv~vs  135 (251)
                       ...|++|..+|....+    ..+   ..+.+..|.    .+.+...+.+.+. + ...|+.++
T Consensus        99 -~~aDvVvi~ag~~rkp----g~t---R~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          99 -EDVDWALLIGAKPRGP----GME---RAALLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             -TTCSEEEECCCCCCCT----TCC---HHHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -cCCceEEEeeccCCCC----CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence             5789999999875311    222   334455553    4445556666663 3 34555554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=92.85  E-value=0.14  Score=35.79  Aligned_cols=64  Identities=14%  Similarity=0.267  Sum_probs=41.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHHHH----------HHHhcCCCccEEEE
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFK-VTGSVCDASSRAEREKLMKQ----------VSSLFNGKLNILIN   82 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~----------i~~~~~~~id~lv~   82 (251)
                      ++++|.|||.|+ |++|     ..+++.+...+.. +.+..   .+.+..+++.++          +.+.. ...|++|+
T Consensus        21 ~l~~~~ilviGa-G~~g-----~~v~~~L~~~g~~~i~v~n---Rt~~ka~~l~~~~~~~~~~~~~~~~~l-~~~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMG-----KTVAKSLVDRGVRAVLVAN---RTYERAVELARDLGGEAVRFDELVDHL-ARSDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHH-----HHHHHHHHHHCCSEEEEEC---SSHHHHHHHHHHHTCEECCGGGHHHHH-HTCSEEEE
T ss_pred             CcccCeEEEECC-CHHH-----HHHHHHHHhcCCcEEEEEc---CcHHHHHHHHHhhhcccccchhHHHHh-ccCCEEEE
Confidence            688999999998 9999     7778888777643 43332   222333333222          22233 47999999


Q ss_pred             cccCC
Q 041276           83 NVGTN   87 (251)
Q Consensus        83 ~ag~~   87 (251)
                      +.+..
T Consensus        91 atss~   95 (159)
T d1gpja2          91 ATAAP   95 (159)
T ss_dssp             CCSSS
T ss_pred             ecCCC
Confidence            98854

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.70  E-value=1.2  Score=31.93  Aligned_cols=145  Identities=14%  Similarity=0.109  Sum_probs=79.9

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPT   93 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~   93 (251)
                      ...+.+ +|.+..++-+  .....+.+.+...+..+..+..|-...  ...+.+.+ ... +.++.|||..+........
T Consensus        22 ~~~g~~-lv~~~~~~~~--~~~~~l~~~l~~~g~~~~~~~~~~~~~--~~~l~~~~-~~~-~~~~~vv~l~~~~~~~~~~   94 (209)
T d2fr1a2          22 RLDGTW-LVAKYAGTAD--ETSTAAREALESAGARVRELVVDARCG--RDELAERL-RSV-GEVAGVLSLLAVDEAEPEE   94 (209)
T ss_dssp             CCCSEE-EEEECTTSSH--HHHHHHHHHHHTTSCEEEEEECCTTCC--HHHHHHHH-TTS-CCCSEEEECTTTTCCCCSS
T ss_pred             CCCCcE-EEEeCCCCch--HHHHHHHHHHHhCCCeEEEecCCCccC--HHHHHHHh-hcc-CCCCeEEEeCCCCCCCCcc
Confidence            344554 4444443322  333567778888888887777665432  22333333 333 6799999988765422221


Q ss_pred             CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCCCCChhhHHhHHHHHHHHHHHHHHHccCCeE
Q 041276           94 VEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLSTNLGTIYAATKGAMNQLAKNLACEWARDNIR  173 (251)
Q Consensus        94 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~  173 (251)
                      .+..        ...+...+.++|.+.   ......++.+++..+.... .....-....+++-+|+|+++.|+....++
T Consensus        95 ~~~~--------~~~~~~~l~l~qal~---~~~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~  162 (209)
T d2fr1a2          95 APLA--------LASLADTLSLVQAMV---SAELGCPLWTVTESAVATG-PFERVRNAAHGALWGVGRVIALENPAVWGG  162 (209)
T ss_dssp             CGGG--------CHHHHHHHHHHHHHH---HTTCCCCEEEEEESCSCSS-TTSCCSCGGGHHHHHHHHHHHHHCGGGEEE
T ss_pred             hhHH--------HHHHHHHHHHHHHHH---hCCCCCcEEEEEcCCcccC-CCcccCCHhHHhHHHHHHHHHHhCCCceEE
Confidence            1111        112444555556543   2333456777765433222 122233567899999999999997654455


Q ss_pred             EEEE
Q 041276          174 INSV  177 (251)
Q Consensus       174 v~~i  177 (251)
                      +..+
T Consensus       163 ~vDl  166 (209)
T d2fr1a2         163 LVDV  166 (209)
T ss_dssp             EEEE
T ss_pred             EEEC
Confidence            5555

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=92.70  E-value=0.058  Score=38.14  Aligned_cols=41  Identities=22%  Similarity=0.325  Sum_probs=29.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAE   61 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   61 (251)
                      .+.+|||+||+||+|     ..+.+-.+..|.+++.....-...+.
T Consensus        23 ~~~~VLV~gaaGgVG-----~~avQlAk~~Ga~Viat~~s~~k~~~   63 (167)
T d1tt7a2          23 EKGSVLVTGATGGVG-----GIAVSMLNKRGYDVVASTGNREAADY   63 (167)
T ss_dssp             GGCCEEEESTTSHHH-----HHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             CCCEEEEeCCcchHH-----HHHHHHHHHcCCceEEEecCHHHHHH
Confidence            467899999999999     66666666667777665554444333

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=92.36  E-value=0.36  Score=33.89  Aligned_cols=67  Identities=12%  Similarity=0.153  Sum_probs=41.3

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc-----------CCCccEEE
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF-----------NGKLNILI   81 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-----------~~~id~lv   81 (251)
                      ..+++|.|+|.|+ ||.+     ..++..+...+.++..+.-   +.+..+++.+.+....           ....|++|
T Consensus        14 ~~~~~k~vlIlGa-GGaa-----rai~~aL~~~~~~i~I~nR---~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiI   84 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGAT-----KGVLLPLLQAQQNIVLANR---TFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVI   84 (171)
T ss_dssp             CCCTTCEEEEECC-SHHH-----HTTHHHHHHTTCEEEEEES---SHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEE
T ss_pred             CCCCCCEEEEECC-cHHH-----HHHHHHHcccCceeeeccc---hHHHHHHHHHHHhhccccchhhhccccccccceee
Confidence            4678999999987 4455     4555555555555555533   4566666666554321           03689999


Q ss_pred             EcccCCC
Q 041276           82 NNVGTNY   88 (251)
Q Consensus        82 ~~ag~~~   88 (251)
                      |+.....
T Consensus        85 N~tp~g~   91 (171)
T d1p77a1          85 NATSAGL   91 (171)
T ss_dssp             ECCCC--
T ss_pred             ecccccc
Confidence            9988654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.21  E-value=0.062  Score=38.36  Aligned_cols=104  Identities=12%  Similarity=0.134  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVGTNYTTKPTVE   95 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~~~~~~~~   95 (251)
                      .+++|||+||+||+|     ....+-.+..|.+++.....-...    +.+++    +  ..|.+++--.... ...+.+
T Consensus        31 ~~~~vlV~gasGGVG-----~~aiQlAk~~Ga~Via~~~~~~k~----~~~~~----l--Gad~vi~~~~~~~-~~~l~~   94 (177)
T d1o89a2          31 QDGEIVVTGASGGVG-----STAVALLHKLGYQVVAVSGRESTH----EYLKS----L--GASRVLPRDEFAE-SRPLEK   94 (177)
T ss_dssp             GGCEEEESSTTSHHH-----HHHHHHHHHTTCCEEEEESCGGGH----HHHHH----H--TEEEEEEGGGSSS-CCSSCC
T ss_pred             CCCcEEEEEccccch-----HHHHHHHHHcCCCeEEEecchhHH----HHHHh----h--ccccccccccHHH-HHHHHh
Confidence            456899999999999     777888888888776654422221    22222    1  4677776432211 111111


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccccccCC
Q 041276           96 YMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVCGVLST  143 (251)
Q Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~~~~~~  143 (251)
                      ...   +..++ ++-+.  .....++.++.  .|++|.++...+....
T Consensus        95 ~~~---~~vvD-~Vgg~--~~~~~l~~l~~--~Griv~~G~~~~~~~~  134 (177)
T d1o89a2          95 QVW---AGAID-TVGDK--VLAKVLAQMNY--GGCVAACGLAGGFTLP  134 (177)
T ss_dssp             CCE---EEEEE-SSCHH--HHHHHHHTEEE--EEEEEECCCTTCSCCC
T ss_pred             hcC---CeeEE-EcchH--HHHHHHHHhcc--ccceEeecccCCcccc
Confidence            111   11111 12221  13344444443  4899999887765433

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=92.17  E-value=0.15  Score=36.17  Aligned_cols=25  Identities=20%  Similarity=0.165  Sum_probs=17.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      .|.+|||+|+ |+||     ..+.+-.+..|
T Consensus        28 ~G~~VlV~Ga-G~iG-----~~~~~~ak~~G   52 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLG-----LFGVVIARSLG   52 (182)
T ss_dssp             BTCEEEEECC-SHHH-----HHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccc-----hhheecccccc
Confidence            6899999997 8999     44444444444

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.86  E-value=0.052  Score=37.49  Aligned_cols=41  Identities=22%  Similarity=0.195  Sum_probs=33.8

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASS   58 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~   58 (251)
                      -+.++||+|||.||+. +|     .+.++.+.+.|.+++++.-+++.
T Consensus         8 ~~~l~gkrvLViGgG~-va-----~~ka~~Ll~~GA~VtVvap~~~~   48 (150)
T d1kyqa1           8 AHQLKDKRILLIGGGE-VG-----LTRLYKLMPTGCKLTLVSPDLHK   48 (150)
T ss_dssp             EECCTTCEEEEEEESH-HH-----HHHHHHHGGGTCEEEEEEEEECT
T ss_pred             heeeCCCEEEEECCCH-HH-----HHHHHHHHHCCCEEEEEeCCCCH
Confidence            3568999999999944 88     78888899999999999777653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=91.76  E-value=0.19  Score=35.08  Aligned_cols=65  Identities=17%  Similarity=0.239  Sum_probs=38.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH----------HHHHHhcCCCccEEEEccc
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLM----------KQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----------~~i~~~~~~~id~lv~~ag   85 (251)
                      .|.+|+|.|+ |++|     ..+.+-.+..|.++..+..+-...+..+++=          +...... +++|.++.++|
T Consensus        30 ~G~~VlI~Ga-G~vG-----~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~-~~~D~vid~~g  102 (168)
T d1uufa2          30 PGKKVGVVGI-GGLG-----HMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL-KSFDFILNTVA  102 (168)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT-TCEEEEEECCS
T ss_pred             CCCEEEEecc-chHH-----HHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhc-CCCceeeeeee
Confidence            5899999986 8999     5566666666655544333222233322221          1112222 56999999988


Q ss_pred             CC
Q 041276           86 TN   87 (251)
Q Consensus        86 ~~   87 (251)
                      ..
T Consensus       103 ~~  104 (168)
T d1uufa2         103 AP  104 (168)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=91.66  E-value=0.13  Score=36.38  Aligned_cols=25  Identities=20%  Similarity=0.185  Sum_probs=17.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      .|.+|+|.|+ ||+|     ...++-++..|
T Consensus        27 ~g~~VlI~Ga-G~vG-----l~~~q~ak~~G   51 (174)
T d1jqba2          27 MGSSVVVIGI-GAVG-----LMGIAGAKLRG   51 (174)
T ss_dssp             TTCCEEEECC-SHHH-----HHHHHHHHTTT
T ss_pred             CCCEEEEEcC-Ccch-----hhhhhhhhccc
Confidence            5788999986 8999     44444444444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.16  E-value=0.088  Score=34.37  Aligned_cols=40  Identities=15%  Similarity=0.111  Sum_probs=32.7

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS   57 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~   57 (251)
                      ..+++||+|||.|++. +|     ...++.+.+.+.++.++..+.+
T Consensus         7 ~l~l~~k~vlVvG~G~-va-----~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGD-VA-----ERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECCSH-HH-----HHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECCCH-HH-----HHHHHHHHHCCCeEEEEeccCC
Confidence            3578999999999865 67     7888888888888888776665

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=90.79  E-value=0.27  Score=34.55  Aligned_cols=14  Identities=14%  Similarity=0.271  Sum_probs=12.3

Q ss_pred             CCCEEEEecCCCCcC
Q 041276           16 QGMTALVTGGTKGLG   30 (251)
Q Consensus        16 ~~k~vlItGas~giG   30 (251)
                      .|.+|+|.|+ |+||
T Consensus        28 ~g~~VlI~G~-G~iG   41 (174)
T d1f8fa2          28 PASSFVTWGA-GAVG   41 (174)
T ss_dssp             TTCEEEEESC-SHHH
T ss_pred             CCCEEEEeCC-CHHH
Confidence            5789999987 8999

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.14  E-value=1.8  Score=29.21  Aligned_cols=99  Identities=12%  Similarity=0.084  Sum_probs=50.8

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC-CHHHHHHHHHHHHH--------------------hcCCCc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS-SRAEREKLMKQVSS--------------------LFNGKL   77 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~--------------------~~~~~i   77 (251)
                      +|.|+||+|.+|     ..++-.+...+.--..+-.|.. +.+..+....++..                    .. ..-
T Consensus         2 KV~IiGA~G~VG-----~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l-~~a   75 (145)
T d1hyea1           2 KVTIIGASGRVG-----SATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII-DES   75 (145)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG-TTC
T ss_pred             EEEEECCCChHH-----HHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh-ccc
Confidence            589999999999     5666556555421123334443 22222222222221                    11 357


Q ss_pred             cEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEe
Q 041276           78 NILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILV  134 (251)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~v  134 (251)
                      |++|.+||....+    ..+.   .+.+..|..=    .+...+.+.+.....++.+
T Consensus        76 DvVVitAG~~~~~----g~sR---~dl~~~Na~i----v~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          76 DVVIITSGVPRKE----GMSR---MDLAKTNAKI----VGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             SEEEECCSCCCCT----TCCH---HHHHHHHHHH----HHHHHHHHHHHCCCEEEEC
T ss_pred             eEEEEecccccCC----CCCh---hhhhhhhHHH----HHHHHHHHhccCCCeEEEE
Confidence            8999999964311    2222   3445555544    4444455555444445544

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=89.12  E-value=0.64  Score=32.27  Aligned_cols=26  Identities=23%  Similarity=0.206  Sum_probs=17.8

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      -.|.+|+|.|+ +|+|     ....+.++..+
T Consensus        27 ~~G~tVlI~Ga-GGvG-----~~aiq~ak~~G   52 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVG-----LAVIMGCKVAG   52 (176)
T ss_dssp             CTTCEEEEECC-SHHH-----HHHHHHHHHHT
T ss_pred             CCCCEEEEecc-hhHH-----HHHHHHHHHHh
Confidence            36899999998 5899     44444544444

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=88.76  E-value=0.16  Score=35.69  Aligned_cols=68  Identities=18%  Similarity=0.207  Sum_probs=42.4

Q ss_pred             ccCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhc-----------CCCccEE
Q 041276           12 RWSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLF-----------NGKLNIL   80 (251)
Q Consensus        12 ~~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-----------~~~id~l   80 (251)
                      ..++++|.|||.|+ ||.+     ..++-.+...+.++..+.   .+.+..+++.+......           ..+.|++
T Consensus        13 ~~~~~~k~vlIlGa-GGaa-----rai~~al~~~g~~i~I~n---Rt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dli   83 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGAS-----RGVLLPLLSLDCAVTITN---RTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLI   83 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEEEC---SSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEE
T ss_pred             CCCCCCCEEEEECC-cHHH-----HHHHHHhcccceEEEecc---chHHHHHHHHHHHhhccccccccccccccccccee
Confidence            35678999999997 5566     566666666665544333   34555555555443211           1358999


Q ss_pred             EEcccCCC
Q 041276           81 INNVGTNY   88 (251)
Q Consensus        81 v~~ag~~~   88 (251)
                      ||+.....
T Consensus        84 IN~Tp~G~   91 (170)
T d1nyta1          84 INATSSGI   91 (170)
T ss_dssp             EECCSCGG
T ss_pred             ecccccCc
Confidence            99986543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.69  E-value=1.7  Score=29.57  Aligned_cols=101  Identities=12%  Similarity=0.067  Sum_probs=51.7

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCC-----eeEEEeccCC-CHHHHHHHHHHH-----------------HHhcC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCF-----KVTGSVCDAS-SRAEREKLMKQV-----------------SSLFN   74 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~-----~~~~~~~D~~-~~~~~~~~~~~i-----------------~~~~~   74 (251)
                      .+|.|+||+|.+|     ..++-.+.....     .+...-.|.. +.+..+....++                 .+.+ 
T Consensus         5 ~KV~IiGA~G~VG-----~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (154)
T d1y7ta1           5 VRVAVTGAAGQIG-----YSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF-   78 (154)
T ss_dssp             EEEEESSTTSHHH-----HHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHH-----HHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhc-
Confidence            4899999999999     555555544321     1112222221 222222222221                 1233 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-C-CceEEEec
Q 041276           75 GKLNILINNVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKAS-G-AGNIILVS  135 (251)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~-~g~iv~vs  135 (251)
                      ...|++|.++|....    ...+.   .+.+..|+.    +.+.+.+.+.+. + .+.++.+|
T Consensus        79 ~~advViitaG~~~~----pg~~r---~dl~~~N~~----i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          79 KDADYALLVGAAPRK----AGMER---RDLLQVNGK----IFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TTCSEEEECCCCCCC----TTCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccccEEEeecCcCCC----CCCcH---HHHHHHHHH----HHHHHHHHHHHhCCCCcEEEEec
Confidence            679999999997541    22333   233444443    445555555653 3 35565554

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.79  E-value=0.28  Score=35.37  Aligned_cols=39  Identities=21%  Similarity=0.205  Sum_probs=34.4

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDA   56 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~   56 (251)
                      |+..|||-++|.|+..--..++..+.+.|.++.++..|.
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~d~   40 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVA   40 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECSEE
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECccc
Confidence            789999999999988888889999999999999887653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=87.61  E-value=1.1  Score=31.18  Aligned_cols=25  Identities=32%  Similarity=0.333  Sum_probs=17.3

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      .|.+|+|.|+ +|+|     ...+..++..+
T Consensus        28 ~GdtVlV~Ga-GG~G-----~~~~~~~~~~g   52 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVG-----LSVIMGCKAAG   52 (176)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTT
T ss_pred             CCCEEEEECC-CCcH-----HHHHHHHHHcC
Confidence            6799999999 6788     44444444443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=87.41  E-value=0.22  Score=34.65  Aligned_cols=32  Identities=19%  Similarity=0.118  Sum_probs=25.8

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV   53 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~   53 (251)
                      ++|.|+|.|| |.+|     ..+++.|.+.+.++..+.
T Consensus         1 ~~K~IliiGa-G~~G-----~~~a~~L~~~g~~V~v~d   32 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVT-----RPTLDVLTDSGIKVTVAC   32 (182)
T ss_dssp             CCCEEEEECC-STTH-----HHHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHH-----HHHHHHHHhCCCEEEEEE
Confidence            4699999987 9999     888889988887765544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.01  E-value=3  Score=27.94  Aligned_cols=102  Identities=14%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHH-HHH--------------HHHHHhcCCCccEEEEc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAERE-KLM--------------KQVSSLFNGKLNILINN   83 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~--------------~~i~~~~~~~id~lv~~   83 (251)
                      +|.|+||+|.+|     ..++-.+...+.--..+-.|+....... ++-              ....+.. ..-|++|..
T Consensus         2 Kv~IiGA~G~VG-----~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~-~~aDivVit   75 (144)
T d1mlda1           2 KVAVLGASGGIG-----QPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL-KGCDVVVIP   75 (144)
T ss_dssp             EEEEETTTSTTH-----HHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH-TTCSEEEEC
T ss_pred             eEEEECCCChHH-----HHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh-CCCCEEEEC
Confidence            588999999999     5555555544321122333443322111 100              1111222 569999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CceEEEeccc
Q 041276           84 VGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASG-AGNIILVSSV  137 (251)
Q Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~g~iv~vss~  137 (251)
                      +|....++    .+   -.+.+..|..-.-.    +.+.+.+.. .+.++++|..
T Consensus        76 ag~~~~~g----~s---R~~ll~~N~~i~~~----i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          76 AGVPRKPG----MT---RDDLFNTNATIVAT----LTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             CSCCCCTT----CC---GGGGHHHHHHHHHH----HHHHHHHHCTTSEEEECSSC
T ss_pred             CCcCCCCC----CC---cchHHHHHHHHHHH----HHHHHHhcCCCeEEEEecCc
Confidence            99643111    11   12245555555444    444445443 4677766654

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.99  E-value=0.46  Score=34.60  Aligned_cols=41  Identities=17%  Similarity=0.133  Sum_probs=35.9

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS   57 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~   57 (251)
                      +|+|.|+|+-||.|+..-...++..+...|.++..+.+|..
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~~   42 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT   42 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            68999999999999877777888888888889999988865

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.96  E-value=0.87  Score=30.17  Aligned_cols=60  Identities=15%  Similarity=0.170  Sum_probs=43.5

Q ss_pred             EEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE--------------EeccCCCHHHHHHHHHHHHHhcCCCccEEEEcc
Q 041276           19 TALVTGGTKGLGNEAELNECLREWKTKCFKVTG--------------SVCDASSRAEREKLMKQVSSLFNGKLNILINNV   84 (251)
Q Consensus        19 ~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~--------------~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~a   84 (251)
                      +|.|.|++|-+|     +.+.+.+.+.+.++..              +-.|+|.|+...+.++.+.+.   ++-+|+-..
T Consensus         2 ki~i~G~~GrMG-----~~i~~~~~~~~~~l~~~id~~~~~~~~~~DVvIDFS~p~~~~~~l~~~~~~---~~p~ViGTT   73 (128)
T d1vm6a3           2 KYGIVGYSGRMG-----QEIQKVFSEKGHELVLKVDVNGVEELDSPDVVIDFSSPEALPKTVDLCKKY---RAGLVLGTT   73 (128)
T ss_dssp             EEEEETTTSHHH-----HHHHHHHHHTTCEEEEEEETTEEEECSCCSEEEECSCGGGHHHHHHHHHHH---TCEEEECCC
T ss_pred             EEEEECCCCHHH-----HHHHHHHhcCCCeEEEEECCCcHHHhccCCEEEEecCHHHHHHHHHHHHhc---CCCEEEEcC
Confidence            589999999999     5555555555544332              247999999999999998875   466776555


Q ss_pred             cC
Q 041276           85 GT   86 (251)
Q Consensus        85 g~   86 (251)
                      |+
T Consensus        74 G~   75 (128)
T d1vm6a3          74 AL   75 (128)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=86.90  E-value=0.32  Score=34.25  Aligned_cols=27  Identities=22%  Similarity=0.106  Sum_probs=18.6

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCF   47 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~   47 (251)
                      -.|.+|+|.|+ ||||     ....+..+..|.
T Consensus        27 ~~G~~VlV~G~-G~iG-----l~a~~~ak~~Ga   53 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVG-----LSAIIGCKIAGA   53 (174)
T ss_dssp             CTTCEEEEECC-SHHH-----HHHHHHHHHTTC
T ss_pred             CCCCEEEEECC-ChHH-----HHHHHHHHHhCC
Confidence            36789999975 9999     555555555443

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=86.64  E-value=0.36  Score=33.99  Aligned_cols=26  Identities=27%  Similarity=0.307  Sum_probs=18.6

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      -.|.+|+|+|+ ||+|     -...+.++..+
T Consensus        28 ~~g~tVlI~G~-GgvG-----l~ai~~ak~~G   53 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVG-----LSVIMGCKSAG   53 (176)
T ss_dssp             CTTCEEEEECC-SHHH-----HHHHHHHHHTT
T ss_pred             CCCCEEEEECC-Cchh-----HHHHHHHHHcC
Confidence            46899999986 8999     55555555554

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.22  E-value=1.5  Score=29.88  Aligned_cols=65  Identities=14%  Similarity=0.106  Sum_probs=38.1

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhc-----CCeeEEEeccCCCHH-HHHHHHHHH-----------------HHhcC
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTK-----CFKVTGSVCDASSRA-EREKLMKQV-----------------SSLFN   74 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~i-----------------~~~~~   74 (251)
                      .+|.|+||+|.+|     ..++-.+...     ......+-.|..... ..+.+.-+.                 .+.+ 
T Consensus         4 ~KV~IiGA~G~VG-----~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (154)
T d5mdha1           4 IRVLVTGAAGQIA-----YSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAF-   77 (154)
T ss_dssp             EEEEESSTTSHHH-----HTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHT-
T ss_pred             eEEEEECCCCHHH-----HHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccccccc-
Confidence            5899999999999     4444444322     234455556654332 222222211                 1233 


Q ss_pred             CCccEEEEcccCCC
Q 041276           75 GKLNILINNVGTNY   88 (251)
Q Consensus        75 ~~id~lv~~ag~~~   88 (251)
                      ...|++|.++|...
T Consensus        78 ~~~dvVVitag~~~   91 (154)
T d5mdha1          78 KDLDVAILVGSMPR   91 (154)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             CCceEEEEecccCC
Confidence            57899999999764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=85.91  E-value=0.33  Score=33.36  Aligned_cols=53  Identities=15%  Similarity=0.141  Sum_probs=33.7

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCe--eEEEeccCCCHHHHHHHHHHHHHhcCCCccEEE
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFK--VTGSVCDASSRAEREKLMKQVSSLFNGKLNILI   81 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv   81 (251)
                      .|.+.|.|+||.||     ..+++-++....+  +..+.+.    ..++.+.+++.+ |  ++..++
T Consensus         2 pK~I~IlGsTGSIG-----~~tL~Vi~~~~d~f~v~~lsa~----~N~~~L~~q~~e-f--~Pk~v~   56 (150)
T d1r0ka2           2 PRTVTVLGATGSIG-----HSTLDLIERNLDRYQVIALTAN----RNVKDLADAAKR-T--NAKRAV   56 (150)
T ss_dssp             CEEEEEETTTSHHH-----HHHHHHHHHTGGGEEEEEEEES----SCHHHHHHHHHH-T--TCSEEE
T ss_pred             CcEEEEECCCcHHH-----HHHHHHHHcCCCCcEEEEEEeC----CCHHHHHHHHHh-h--ccccce
Confidence            48999999999999     7777777665433  4444443    244555555433 4  566664

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.82  E-value=0.78  Score=31.49  Aligned_cols=31  Identities=23%  Similarity=0.239  Sum_probs=21.6

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|.+|||.|+ |+||     ..+.+.++..+.++...
T Consensus        27 ~g~~vlv~G~-G~iG-----~~a~~~a~~~g~~v~~~   57 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLG-----HVAVQYAKAMGLNVVAV   57 (168)
T ss_dssp             TTCEEEEECC-STTH-----HHHHHHHHHTTCEEEEE
T ss_pred             CCCEEEEeec-ccch-----hhhhHHHhcCCCeEecc
Confidence            5789999875 9999     56666666666654433

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=85.38  E-value=1.5  Score=30.55  Aligned_cols=27  Identities=26%  Similarity=0.246  Sum_probs=19.2

Q ss_pred             CCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcC
Q 041276           14 SLQGMTALVTGGTKGLGNEAELNECLREWKTKC   46 (251)
Q Consensus        14 ~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~   46 (251)
                      --.|.+|+|.|+ ||+|     ....+.++..+
T Consensus        25 ~~~G~~VlV~Ga-GgvG-----l~a~~~ak~~G   51 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVG-----FSAIVGCKAAG   51 (174)
T ss_dssp             CCTTCEEEEECC-SHHH-----HHHHHHHHHHT
T ss_pred             CCCCCEEEEECC-Cchh-----HHHHHHHHHcC
Confidence            346899999986 8999     55555555554

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.48  E-value=0.68  Score=33.56  Aligned_cols=42  Identities=19%  Similarity=0.060  Sum_probs=36.3

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCH
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSR   59 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   59 (251)
                      |+|.|+++-||.|+..-...++..+...+.++..+.+|....
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~~~   43 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMA   43 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCSSS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence            799999999999987777788888888888999999987653

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.22  E-value=0.76  Score=34.46  Aligned_cols=43  Identities=14%  Similarity=0.139  Sum_probs=36.4

Q ss_pred             CCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCC
Q 041276           15 LQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDAS   57 (251)
Q Consensus        15 l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~   57 (251)
                      -.+++|+|+.|-||.|+..-...++..+.+.|.++..+.+|..
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3678888888899999877777888888888999999999964

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.21  E-value=5  Score=27.96  Aligned_cols=108  Identities=11%  Similarity=0.051  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCCCcCc--HH--H----HHHHHHHHHhcCCeeEEEeccCCC--HHHHH--HHHHHHHHhcCCCccEEEE
Q 041276           15 LQGMTALVTGGTKGLGN--EA--E----LNECLREWKTKCFKVTGSVCDASS--RAERE--KLMKQVSSLFNGKLNILIN   82 (251)
Q Consensus        15 l~~k~vlItGas~giG~--~~--~----~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~--~~~~~i~~~~~~~id~lv~   82 (251)
                      +++|++++.|-|--.|.  ..  .    ...+.+.+...  .+.++..=+.-  .....  ..+..+.... .+.|+|+.
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~--~~~v~N~gi~G~t~~~~~~~~~~~~~~~~~-~~~D~vvi   77 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKH--TFQVRNMASGGQIARGFRNDGQLEAILKYI-KPGDYFML   77 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTT--TCEEEECCCTTCCHHHHHHSSHHHHHHTTC-CTTCEEEE
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCC--ceEEEeCeechhhhccHhhhhhHHHHHHhc-CCCCEEEE
Confidence            46899999999966661  00  0    12222223222  23333332221  12211  1344444554 56799999


Q ss_pred             cccCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCceEEEecccc
Q 041276           83 NVGTNYTTKPTVEYMAEDLSFLMSTNFESAYHLSQLAHPLLKASGAGNIILVSSVC  138 (251)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~iv~vss~~  138 (251)
                      ..|... .......+.+++...++           .++..+++. ...+|+++...
T Consensus        78 ~~G~ND-~~~~~~~~~~~~~~~l~-----------~li~~~~~~-~~~~vl~~~~~  120 (208)
T d2o14a2          78 QLGIND-TNPKHKESEAEFKEVMR-----------DMIRQVKAK-GADVILSTPQG  120 (208)
T ss_dssp             ECCTGG-GCGGGCCCHHHHHHHHH-----------HHHHHHHTT-TCEEEEECCCC
T ss_pred             EcCCCc-ccccccccHHHHHHHHH-----------HHHHHHHhc-CCceeeccccc
Confidence            888654 22222344554443332           223333444 36677776544

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.66  E-value=0.53  Score=36.20  Aligned_cols=36  Identities=14%  Similarity=0.071  Sum_probs=28.0

Q ss_pred             CEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEec
Q 041276           18 MTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVC   54 (251)
Q Consensus        18 k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~   54 (251)
                      |+|||++|+.| |.-.....++++|.+.|.++.++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            56777776557 9766677899999999999988753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.32  E-value=1.2  Score=30.52  Aligned_cols=30  Identities=20%  Similarity=0.306  Sum_probs=21.1

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTG   51 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~   51 (251)
                      .|.+|+|.|+ |++|     ..+.+-++..|.++..
T Consensus        27 ~g~~VlV~Ga-G~vG-----~~~~~~ak~~G~~Vi~   56 (166)
T d1llua2          27 PGQWVAISGI-GGLG-----HVAVQYARAMGLHVAA   56 (166)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEeec-cccH-----HHHHHHHHHcCCccce
Confidence            5789999886 9999     5566666666644433

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.39  E-value=1.9  Score=29.47  Aligned_cols=66  Identities=14%  Similarity=0.110  Sum_probs=39.2

Q ss_pred             CCCEEEEecCCCCcC-----------------cHHHHHHHHHHHHhcCCeeEEEeccCC---CHHHHHHHHHHHHHhcCC
Q 041276           16 QGMTALVTGGTKGLG-----------------NEAELNECLREWKTKCFKVTGSVCDAS---SRAEREKLMKQVSSLFNG   75 (251)
Q Consensus        16 ~~k~vlItGas~giG-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~i~~~~~~   75 (251)
                      +|+++.|.+.|+|.|                 +++..+++.+.+....  ..--++|++   +++.+.++++.+.+.  +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d--~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD--P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS--T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCCCHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC--C
Confidence            588999999999999                 2222222222222111  111234543   677888888887775  6


Q ss_pred             CccEEEEccc
Q 041276           76 KLNILINNVG   85 (251)
Q Consensus        76 ~id~lv~~ag   85 (251)
                      .+|.++....
T Consensus        78 ~vd~v~v~~~   87 (163)
T d2csua3          78 NVDMLIAICV   87 (163)
T ss_dssp             TCSEEEEEEE
T ss_pred             CcCEEEEeec
Confidence            8998765443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=82.35  E-value=3.8  Score=28.04  Aligned_cols=64  Identities=17%  Similarity=0.281  Sum_probs=40.0

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHHhc-----CCCccEEEEcccCCC
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCF-KVTGSVCDASSRAEREKLMKQVSSLF-----NGKLNILINNVGTNY   88 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~-----~~~id~lv~~ag~~~   88 (251)
                      ++|.|+|.|+ ||.+     ..+...+...+. ++..+.   .+.+..+.+.+.....+     ....|++||+.....
T Consensus        16 ~~~~vlIlGa-GGaa-----rai~~aL~~~g~~~I~I~n---R~~~ka~~L~~~~~~~~~~~~~~~~~DliINaTpiGm   85 (167)
T d1npya1          16 KNAKVIVHGS-GGMA-----KAVVAAFKNSGFEKLKIYA---RNVKTGQYLAALYGYAYINSLENQQADILVNVTSIGM   85 (167)
T ss_dssp             TTSCEEEECS-STTH-----HHHHHHHHHTTCCCEEEEC---SCHHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTTC
T ss_pred             CCCeEEEECC-CHHH-----HHHHHHHHHCCCCEEEEec---ccHHHHHHHHHhhhhhhhhcccccchhhheeccccCC
Confidence            5688999987 7778     677777777764 444443   34455555554432211     146799999877543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.18  E-value=1.1  Score=30.89  Aligned_cols=31  Identities=16%  Similarity=0.010  Sum_probs=22.5

Q ss_pred             CCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEE
Q 041276           16 QGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGS   52 (251)
Q Consensus        16 ~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~   52 (251)
                      .|.+|+|.|+ |++|     ..+.+-++..|.++..+
T Consensus        27 ~g~~vlI~Ga-G~vG-----~~a~q~ak~~G~~vi~~   57 (168)
T d1piwa2          27 PGKKVGIVGL-GGIG-----SMGTLISKAMGAETYVI   57 (168)
T ss_dssp             TTCEEEEECC-SHHH-----HHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEECC-CCcc-----hhHHHHhhhcccccccc
Confidence            6899999987 8999     55666666666665443

>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
species: Acetobacter aceti [TaxId: 435]

Probab=81.92  E-value=3.5  Score=28.20  Aligned_cols=66  Identities=8%  Similarity=0.109  Sum_probs=45.5

Q ss_pred             CCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEe-ccCCCHHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 041276           17 GMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSV-CDASSRAEREKLMKQVSSLFNGKLNILINNVGTNY   88 (251)
Q Consensus        17 ~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag~~~   88 (251)
                      .|+++|.|++|-+   .-.+++.+.++..+....... .=...++.+.+++++...   ..++++|-.||...
T Consensus         3 P~V~IimGS~SD~---~v~~~a~~~L~~~gI~~e~~v~SAHR~p~~l~~~~~~~e~---~~~~viIa~AG~aa   69 (159)
T d1u11a_           3 PVVGIIMGSQSDW---ETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAE---RGLNVIIAGAGGAA   69 (159)
T ss_dssp             CSEEEEESSGGGH---HHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTT---TTCCEEEEEEESSC
T ss_pred             CeEEEEeCCHhhH---HHHHHHHHHHHHhCCceEEEEehHhhChHHHHHHHHHHHh---cCCeEEEEEecCCC
Confidence            4899999999854   455666666777665544332 234577888877776544   46999999998653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=81.73  E-value=1.5  Score=29.48  Aligned_cols=58  Identities=16%  Similarity=0.198  Sum_probs=41.1

Q ss_pred             cCCCCCEEEEecCCCCcCcHHHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHHhcCCCccEEEEccc
Q 041276           13 WSLQGMTALVTGGTKGLGNEAELNECLREWKTKCFKVTGSVCDASSRAEREKLMKQVSSLFNGKLNILINNVG   85 (251)
Q Consensus        13 ~~l~~k~vlItGas~giG~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~id~lv~~ag   85 (251)
                      ++..-|+|.|.||.|-+|     ..+++.|.+.|..+..+..+  .....+..+        ...|.++.+..
T Consensus         5 ~~~~~~kI~iIGg~G~mG-----~~la~~L~~~G~~V~~~d~~--~~~~~~~~~--------~~~~~v~~~~~   62 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLG-----GLFARYLRASGYPISILDRE--DWAVAESIL--------ANADVVIVSVP   62 (152)
T ss_dssp             SCTTCCCEEEETTTSHHH-----HHHHHHHHTTTCCEEEECTT--CGGGHHHHH--------TTCSEEEECSC
T ss_pred             cCCCCCeEEEEcCCCHHH-----HHHHHHHHHcCCCcEecccc--cccccchhh--------hhccccccccc
Confidence            445568999999999999     88999999998887766443  333322222        46788877654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=81.65  E-value=0.77  Score=31.89  Aligned_cols=14  Identities=36%  Similarity=0.601  Sum_probs=12.0

Q ss_pred             CCCEEEEecCCCCcC
Q 041276           16 QGMTALVTGGTKGLG   30 (251)
Q Consensus        16 ~~k~vlItGas~giG   30 (251)
                      .|.+|+|.|+ |++|
T Consensus        32 ~g~~vli~Ga-G~vG   45 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLG   45 (172)
T ss_dssp             TTCEEEEECC-SHHH
T ss_pred             CCCEEEEeCC-ChHH
Confidence            5789999886 9999